Clc02G02390 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G02390
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	translation initiation factor IF-2 isoform X1
Location	ClcChr02: 2195943 .. 2196701 (-)
RNA-Seq Expression	Clc02G02390
Synteny	Clc02G02390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTGTCAATTAATTGCGATTATGGAGACATAA

mRNA sequence

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTGTCAATTAATTGCGATTATGGAGACATAA

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACTTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCTTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTTGTCCTGACCCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCTCTTTCCCCTCAACCCCTATCTCGACCCCCATCCGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGCGGGATCGCCCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGGCTCCTCCTCCGGCTGTGACGTTTCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGACAGTACGGGAATTATGGGCCTCCGAGCCGGTATGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGGCGGATCTGGTGGCGATAGTGAATCGGCCAAGATCCAGTGGGAATCGTCCGAGTTCTAGTGGATGGTATGTTTCTGTCAAATCCTTGCCCTTTTTACCTTCTCTAAGTCCTTGTCAATTAATTGCGATTATGGAGACATAA

Protein sequence

MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGWYVSVKSLPFLPSLSPCQLIAIMET

Homology

[Close]

BLAST of Clc02G02390 vs. NCBI nr
Match: XP_038888443.1 (translation initiation factor IF-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 218/236 (92.37%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPN 60
           MAKTNKYTSINFNHIYDKNLS NSKTGNNPSKNP      SSSSSSSFASATYSSISSPN
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTGNNPSKNPSSSSSSSSSSSSSFASATYSSISSPN 60

Query: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTR-PQSDSDSISLRPLGR 120
           KSHGRMLVLTRPTPKPITSPPPLSPQP  RPPSADHRPVPDQTR PQSDSDSISLRPLGR
Sbjct: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRPLGR 120

Query: 121 TGTGGIAPSPIPSLEKDKE-APPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TGTGGIAPSPIPSLEKDKE  PP AVT HKPEKFVPPHLRAGFVGKEERPVNVGIRSREA
Sbjct: 121 TGTGGIAPSPIPSLEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGW 229
           NQRQYGNYG PSRYGEDGRPKSGGGYERMKGAGEA+L A+VNRPRSSGNRPSSSGW
Sbjct: 181 NQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLGAMVNRPRSSGNRPSSSGW 236

[Close]

BLAST of Clc02G02390 vs. NCBI nr
Match: XP_038888444.1 (putative protein TPRXL isoform X2 [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 217/235 (92.34%), Postives = 219/235 (93.19%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPN 60
           MAKTNKYTSINFNHIYDKNLS NSKTGNNPSKNP      SSSSSSSFASATYSSISSPN
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTGNNPSKNPSSSSSSSSSSSSSFASATYSSISSPN 60

Query: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTR-PQSDSDSISLRPLGR 120
           KSHGRMLVLTRPTPKPITSPPPLSPQP  RPPSADHRPVPDQTR PQSDSDSISLRPLGR
Sbjct: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRPLGR 120

Query: 121 TGTGGIAPSPIPSLEKDKE-APPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TGTGGIAPSPIPSLEKDKE  PP AVT HKPEKFVPPHLRAGFVGKEERPVNVGIRSREA
Sbjct: 121 TGTGGIAPSPIPSLEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NQRQYGNYG PSRYGEDGRPKSGGGYERMKGAGEA+L A+VNRPRSSGNRPSSSG
Sbjct: 181 NQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLGAMVNRPRSSGNRPSSSG 235

[Close]

BLAST of Clc02G02390 vs. NCBI nr
Match: XP_008455486.1 (PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_008455487.1 PREDICTED: translation initiation factor IF-2 isoform X2 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 3.7e-102
Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP  LSPQP SRP SADHRPVPDQ RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPI  LEK++E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG  SRYGEDGRPKSGGGYERMKG GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Clc02G02390 vs. NCBI nr
Match: XP_004144518.1 (uncharacterized protein LOC101206223 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 3.7e-102
Identity = 205/229 (89.52%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQP SRP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP LEKD+E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG   RYGEDGRPKSGGGYERMK  GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Clc02G02390 vs. NCBI nr
Match: XP_022952341.1 (uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266.1 hypothetical protein SDJN03_28994, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 201/229 (87.77%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP LSPQP SR PSAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG P RYGEDGRPKSGG YERM GAGEAD  A+VNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of Clc02G02390 vs. ExPASy TrEMBL
Match: A0A0A0K3D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 216/244 (88.52%), Postives = 221/244 (90.57%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQP SRP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP LEKD+E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGWYVSVKSLPFL 240
           NYG   RYGEDGRPKSGGGYERMK  GEADL A+VNRPRSSGNRPSSSGWYVSVK L FL
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSGWYVSVKYLLFL 240

Query: 241 PSLS 243
            S+S
Sbjct: 241 NSMS 244

[Close]

BLAST of Clc02G02390 vs. ExPASy TrEMBL
Match: A0A1S3C160 (translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495638 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.8e-102
Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP  LSPQP SRP SADHRPVPDQ RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPI  LEK++E  PP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG  SRYGEDGRPKSGGGYERMKG GEADL A+VNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of Clc02G02390 vs. ExPASy TrEMBL
Match: A0A6J1GJZ3 (uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.3e-100
Identity = 201/229 (87.77%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP LSPQP SR PSAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG P RYGEDGRPKSGG YERM GAGEAD  A+VNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of Clc02G02390 vs. ExPASy TrEMBL
Match: A0A6J1GK55 (uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.3e-100
Identity = 201/229 (87.77%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP LSPQP SR PSAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
           NYG P RYGEDGRPKSGG YERM GAGEAD  A+VNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of Clc02G02390 vs. ExPASy TrEMBL
Match: A0A6J1I0F0 (uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468300 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.5e-98
Identity = 199/231 (86.15%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP---SSSSSSSFASATYSSISSPNKSH 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP   SSSSSSSFASATYSSISS NKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQPLSRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPI+S P LSPQP SR PSAD RPV DQT PQ +SDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 GIAPSPIPSLEKDKEAPPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
            IAPSPIP+LEKDKE PPP VT HKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGPPSRYGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSGW 229
           GNYG P RYGEDGRPKSGG  ERM GAGEAD   +VNRPRSSGNRP+SSGW
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 231

[Close]

BLAST of Clc02G02390 vs. TAIR 10
Match: AT3G54680.1 (proteophosphoglycan-related )

HSP 1 Score: 115.2 bits (287), Expect = 7.9e-26
Identity = 100/235 (42.55%), Postives = 128/235 (54.47%), Query Frame = 0


Query: 5   NKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLT 64
           NKYTSINFNHI  K+              PSSSSSSS  SA+YSS++   +S+GRMLVLT
Sbjct: 7   NKYTSINFNHILHKD-------------PPSSSSSSS--SASYSSVA---RSNGRMLVLT 66

Query: 65  RPTPKPITSPPPLSPQPLSRPPSADHRPVP-DQTRPQSDSDSISLRPLGRTGTGGIAPSP 124
           + +PKP+ SP        + PP +    +P +Q     D   ISLRPLG TG+      P
Sbjct: 67  KSSPKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLSFP 126

Query: 125 I--PSLEKDKE--APPPAVTFHKPEKFVPPHLRAGFVGKEERPVNVGIRSREAN---QRQ 184
           I  P + K  E  AP P     KP++FVPPHLR GFV K+E+P     R R+ N    ++
Sbjct: 127 IRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLNQR 186

Query: 185 YGNYGPPSR----YGEDGRPKSGGGYERMKGAGEADLVAIVNRPRSSGNRPSSSG 228
             N   P +    YG+ GRPKS GGYER++             PR +GNRP +SG
Sbjct: 187 LPNQEQPRQEYFGYGQPGRPKS-GGYERIR-----------TDPRITGNRPGTSG 211

The following BLAST results are available for this feature:

BLAST of Clc02G02390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888443.1	1.0e-107	92.37	translation initiation factor IF-2 isoform X1 [Benincasa hispida]	[more]
XP_038888444.1	1.9e-106	92.34	putative protein TPRXL isoform X2 [Benincasa hispida]	[more]
XP_008455486.1	3.7e-102	89.96	PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_0084...	[more]
XP_004144518.1	3.7e-102	89.52	uncharacterized protein LOC101206223 [Cucumis sativus]	[more]
XP_022952341.1	1.7e-99	87.77	uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266...	[more]

BLAST of Clc02G02390 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G02390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3D7	2.2e-108	88.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1	[more]
A0A1S3C160	1.8e-102	89.96	translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1GJZ3	8.3e-100	87.77	uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GK55	8.3e-100	87.77	uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I0F0	3.5e-98	86.15	uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Clc02G02390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54680.1	7.9e-26	42.55	proteophosphoglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G02390.2	Clc02G02390.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006413	translational initiation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003743	translation initiation factor activity