Clc02G02260 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G02260
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Cupin_3 domain-containing protein
Location	ClcChr02: 2067657 .. 2069220 (+)
RNA-Seq Expression	Clc02G02260
Synteny	Clc02G02260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTATTGGTATTGAACCATTTGCGAACCAGAAACGTACACGTTAACGACTAAACCTGTAATCGTCTTTGAATTTGGTTATTTCTTTAAACGAGATAAGGATACCGTGAGTCCCGGTTTCCAGTCAAAATTTCCCGCCAGTGACGTGGAAAGCCAAAGCCCAATATGATACTTTCGGGGGAAATTTTGGATAAACCTTGCTTGAGGGTTTTAGGGTTTGCTAGTGCTTCGACCCTGCAACTCGCTTTCTCTTCATTTCTTCAAGTCTGCGGGCAATTCTAAAGGTAAAGTTCTGATTTCTATCAATCTTTTGAATTCTAATGGACCATTTCTTGCAAATTTCTTCTAAATTTTAGTTTGTGTTTGTTTTCTTTTATGCATTTTCGAAACTTTCTGCGATTTTAATGAGGAATTGTAAGGAAACGAGGAGGGTTTTCTTTGAATGGAAATACCCAGTTCTGCTTTCTTGAGTTCGAACTTGTGTCGTCAGTTTTAGCTGCTAGGACAAATTTTCATTACTGGGTCTTGGGATTGTGACTTCCAGATTTGCCATGCTGAAACTTCTGAGTCTAATAGTAGAATTGCCATGCCTTTCCAAAACCTGCTTGTTGGAGATTTTGTGTTTTTACCTATCGATAAATGAAGTTTTGATGGTATGGAATGCCACCATAAATGTACAATTTGAAGTTGGAAACTCTGTATTCATAAACCCATTCACAAAGATTGAGAGAGCCCATCAACAAAATGAACAAGCAAATTCTGTCACTAGAGTTAAAGGTTTCATAGCAATAGAACTTTTAGAGGGGATGAAAAACTTGTAGGGAGTTGTAGACCCTTTCTAGATTTCACGCCTTTCTCTGGCTTTACGATCATTTTGATGTTATTTTGCTTGACTGGAGTCCTTTCTTAGACTAGTTGGACTGTTCCTTCTATGTTCTTTTTTTTTTTTTTTGTATGTCTTGTGTATTCGTCCATTTTTTCTCAATCCATGCTTGGCATTTTACCGAAAAAGAAAAATTTTGAACAGCTCAAAAGTTTTATTGATCCTTTGCATACAGTTTTATCCATCTTCTGTGCTACTTTGGGCTTCAACATTCTCTGAAGGTAGCATTTATATAGTGTTAAGCATGGCGAGTATGCTTGCTGCTCCTACAATGGCCTCATTCCATGTGAATATAGGGAGCAAAAACTATACAAAGTTGAAATCTACCATTAAGGGAACTCACAATATAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAGTTGTACAATATAAGAGTTGAACGGAAAGTATCGGAGGACCGGCTTTCCCAGCTTGGAGTTTCGAGATGGTCGATTTGGAAGACGGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTTTACATCGAGGAAGGTGAAGTGCGAGTAGTCCCTGAGGGGAGCCAGCAGTACATGAGTTTCGTGGCCGGAGATCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTTTTTTTCAACGGACCGTATCAAGAGCGTTACAGTTTCAGAGCATATGGTGACGACTATTAG

mRNA sequence

ATGGGTTATTGTCTGCGGGCAATTCTAAAGTTTTATCCATCTTCTGTGCTACTTTGGGCTTCAACATTCTCTGAAGGTAGCATTTATATAGTGTTAAGCATGGCGAGTATGCTTGCTGCTCCTACAATGGCCTCATTCCATGTGAATATAGGGAGCAAAAACTATACAAAGTTGAAATCTACCATTAAGGGAACTCACAATATAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAGTTGTACAATATAAGAGTTGAACGGAAAGTATCGGAGGACCGGCTTTCCCAGCTTGGAGTTTCGAGATGGTCGATTTGGAAGACGGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTTTACATCGAGGAAGGTGAAGTGCGAGTAGTCCCTGAGGGGAGCCAGCAGTACATGAGTTTCGTGGCCGGAGATCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTTTTTTTCAACGGACCGTATCAAGAGCGTTACAGTTTCAGAGCATATGGTGACGACTATTAG

Coding sequence (CDS)

ATGGGTTATTGTCTGCGGGCAATTCTAAAGTTTTATCCATCTTCTGTGCTACTTTGGGCTTCAACATTCTCTGAAGGTAGCATTTATATAGTGTTAAGCATGGCGAGTATGCTTGCTGCTCCTACAATGGCCTCATTCCATGTGAATATAGGGAGCAAAAACTATACAAAGTTGAAATCTACCATTAAGGGAACTCACAATATAAGGGCTATGCGGATAGAGAAACCTCTTGAGGAGTTGTACAATATAAGAGTTGAACGGAAAGTATCGGAGGACCGGCTTTCCCAGCTTGGAGTTTCGAGATGGTCGATTTGGAAGACGGGAAAGTGTAAATTGCCATGGGACTGGCAAGCAGATCAACTGGTTTACATCGAGGAAGGTGAAGTGCGAGTAGTCCCTGAGGGGAGCCAGCAGTACATGAGTTTCGTGGCCGGAGATCTTGTTCGGTATCCAAAGTGGTTTGAAGCTGACCTTTTTTTCAACGGACCGTATCAAGAGCGTTACAGTTTCAGAGCATATGGTGACGACTATTAG

Protein sequence

MGYCLRAILKFYPSSVLLWASTFSEGSIYIVLSMASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDDY

Homology

[Close]

BLAST of Clc02G02260 vs. NCBI nr
Match: KAG6589149.1 (hypothetical protein SDJN03_17714, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.7 bits (748), Expect = 2.1e-75
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 19  WAS-TFSEGSIYIVLSMASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPL 78
           WAS TF EGSIYIV SMASMLAAPTMA+F VNIGSKN+TKL STIKG+  IRAMRIEKPL
Sbjct: 39  WASLTFLEGSIYIVSSMASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPL 98

Query: 79  EELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQ 138
           EELYN+RVERKVSE+RLSQLGVSRWS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+
Sbjct: 99  EELYNVRVERKVSEERLSQLGVSRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSK 158

Query: 139 QYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDDY 178
           QYMSFVAGDLVRYPKWFEADLFFNGPYQERY F+AYGDDY
Sbjct: 159 QYMSFVAGDLVRYPKWFEADLFFNGPYQERYCFKAYGDDY 198

[Close]

BLAST of Clc02G02260 vs. NCBI nr
Match: KAG7022849.1 (hypothetical protein SDJN02_16585, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.7 bits (748), Expect = 2.1e-75
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 19  WAS-TFSEGSIYIVLSMASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPL 78
           WAS TF EGSIYIV SMASMLAAPTMA+F VNIGSKN+TKL STIKG+  IRAMRIEKPL
Sbjct: 40  WASLTFLEGSIYIVSSMASMLAAPTMATFRVNIGSKNHTKLNSTIKGSLKIRAMRIEKPL 99

Query: 79  EELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQ 138
           EELYN+RVERKVSE+RLSQLGVSRWS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+
Sbjct: 100 EELYNVRVERKVSEERLSQLGVSRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSK 159

Query: 139 QYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDDY 178
           QYMSFVAGDLVRYPKWFEADLFFNGPYQERY F+AYGDDY
Sbjct: 160 QYMSFVAGDLVRYPKWFEADLFFNGPYQERYCFKAYGDDY 199

[Close]

BLAST of Clc02G02260 vs. NCBI nr
Match: XP_008455463.1 (PREDICTED: uncharacterized protein LOC103495620 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 134/144 (93.06%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 34  MASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDR 93
           MASMLAAPTMASFHVNIGSKNYTKL STIKG+H+IRAMRIEKPLEELYN++VERKVSE+R
Sbjct: 1   MASMLAAPTMASFHVNIGSKNYTKLNSTIKGSHSIRAMRIEKPLEELYNVKVERKVSEER 60

Query: 94  LSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKW 153
           LSQLGVSRWS+WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKW
Sbjct: 61  LSQLGVSRWSVWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 154 FEADLFFNGPYQERYSFRAYGDDY 178
           FEADLFFNGPY ERYSFRAYGDD+
Sbjct: 121 FEADLFFNGPYLERYSFRAYGDDH 144

[Close]

BLAST of Clc02G02260 vs. NCBI nr
Match: KAA0040221.1 (RmlC-like cupins superfamily protein [Cucumis melo var. makuwa] >TYK07127.1 RmlC-like cupins superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 281.6 bits (719), Expect = 4.8e-72
Identity = 132/141 (93.62%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 37  MLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDRLSQ 96
           MLAAPTMASFHVNIGSKNYTKL STIKG+H+IRAMRIEKPLEELYN++VERKVSE+RLSQ
Sbjct: 1   MLAAPTMASFHVNIGSKNYTKLNSTIKGSHSIRAMRIEKPLEELYNVKVERKVSEERLSQ 60

Query: 97  LGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKWFEA 156
           LGVSRWS+WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKWFEA
Sbjct: 61  LGVSRWSVWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKWFEA 120

Query: 157 DLFFNGPYQERYSFRAYGDDY 178
           DLFFNGPYQERYSFRAYGDD+
Sbjct: 121 DLFFNGPYQERYSFRAYGDDH 141

[Close]

BLAST of Clc02G02260 vs. NCBI nr
Match: XP_038887936.1 (uncharacterized protein LOC120077906 [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 9.0e-71
Identity = 134/144 (93.06%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 34  MASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDR 93
           MASMLAAPTMASFHVNIGSK++TKLK TIK +H IRAMRIEKPLEELYNIRVERKVSEDR
Sbjct: 1   MASMLAAPTMASFHVNIGSKDHTKLKYTIKRSHIIRAMRIEKPLEELYNIRVERKVSEDR 60

Query: 94  LSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKW 153
           L QLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKW
Sbjct: 61  LFQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 154 FEADLFFNGPYQERYSFRAYGDDY 178
           FEADLFFNGPYQERYSF+AYGDD+
Sbjct: 121 FEADLFFNGPYQERYSFKAYGDDH 144

[Close]

BLAST of Clc02G02260 vs. ExPASy TrEMBL
Match: A0A1S3C0I6 (uncharacterized protein LOC103495620 OS=Cucumis melo OX=3656 GN=LOC103495620 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.1e-73
Identity = 134/144 (93.06%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 34  MASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDR 93
           MASMLAAPTMASFHVNIGSKNYTKL STIKG+H+IRAMRIEKPLEELYN++VERKVSE+R
Sbjct: 1   MASMLAAPTMASFHVNIGSKNYTKLNSTIKGSHSIRAMRIEKPLEELYNVKVERKVSEER 60

Query: 94  LSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKW 153
           LSQLGVSRWS+WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKW
Sbjct: 61  LSQLGVSRWSVWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 154 FEADLFFNGPYQERYSFRAYGDDY 178
           FEADLFFNGPY ERYSFRAYGDD+
Sbjct: 121 FEADLFFNGPYLERYSFRAYGDDH 144

[Close]

BLAST of Clc02G02260 vs. ExPASy TrEMBL
Match: A0A5D3C5M8 (RmlC-like cupins superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004480 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.3e-72
Identity = 132/141 (93.62%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 37  MLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDRLSQ 96
           MLAAPTMASFHVNIGSKNYTKL STIKG+H+IRAMRIEKPLEELYN++VERKVSE+RLSQ
Sbjct: 1   MLAAPTMASFHVNIGSKNYTKLNSTIKGSHSIRAMRIEKPLEELYNVKVERKVSEERLSQ 60

Query: 97  LGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKWFEA 156
           LGVSRWS+WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKWFEA
Sbjct: 61  LGVSRWSVWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKWFEA 120

Query: 157 DLFFNGPYQERYSFRAYGDDY 178
           DLFFNGPYQERYSFRAYGDD+
Sbjct: 121 DLFFNGPYQERYSFRAYGDDH 141

[Close]

BLAST of Clc02G02260 vs. ExPASy TrEMBL
Match: A0A6J1EXN3 (uncharacterized protein LOC111437127 OS=Cucurbita moschata OX=3662 GN=LOC111437127 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.4e-69
Identity = 130/144 (90.28%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 34  MASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDR 93
           MASMLAAPTMA+F VNIGSKN+TK  STIKG+  IRAMRIEKPLEELYN+RVERKVSE+R
Sbjct: 1   MASMLAAPTMATFRVNIGSKNHTKSNSTIKGSLKIRAMRIEKPLEELYNVRVERKVSEER 60

Query: 94  LSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKW 153
           LSQLGVSRWS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKW
Sbjct: 61  LSQLGVSRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 154 FEADLFFNGPYQERYSFRAYGDDY 178
           FEADLFFNGPYQERY F+AYGDDY
Sbjct: 121 FEADLFFNGPYQERYCFKAYGDDY 144

[Close]

BLAST of Clc02G02260 vs. ExPASy TrEMBL
Match: A0A6J1JN52 (uncharacterized protein LOC111486192 OS=Cucurbita maxima OX=3661 GN=LOC111486192 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.0e-68
Identity = 128/144 (88.89%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 34  MASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDR 93
           MASMLAAPTMA+F VNIGSKN+TK  STIKG+  IRAM IEKPLEELYN+RVER+VSE+R
Sbjct: 1   MASMLAAPTMATFRVNIGSKNHTKSNSTIKGSLKIRAMHIEKPLEELYNVRVERRVSEER 60

Query: 94  LSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKW 153
           LSQLGVSRWS WKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKW
Sbjct: 61  LSQLGVSRWSTWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 154 FEADLFFNGPYQERYSFRAYGDDY 178
           FEADLFFNGPYQERY F+AYGDDY
Sbjct: 121 FEADLFFNGPYQERYCFKAYGDDY 144

[Close]

BLAST of Clc02G02260 vs. ExPASy TrEMBL
Match: A0A0A0K6T4 (Cupin_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041900 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.8e-67
Identity = 128/144 (88.89%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 34  MASMLAAPTMASFHVNIGSKNYTKLKSTIKGTHNIRAMRIEKPLEELYNIRVERKVSEDR 93
           MASMLAAPTMASFHV+IGSKNY KLKS     H++RAMRIEKPLEELYN++VERKVSE+R
Sbjct: 1   MASMLAAPTMASFHVSIGSKNYRKLKS-----HSVRAMRIEKPLEELYNVKVERKVSEER 60

Query: 94  LSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKW 153
           LSQL VS WSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGS+QYMSFVAGDLVRYPKW
Sbjct: 61  LSQLRVSSWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSKQYMSFVAGDLVRYPKW 120

Query: 154 FEADLFFNGPYQERYSFRAYGDDY 178
           FEADLFFNGPYQERYSFRAYGDD+
Sbjct: 121 FEADLFFNGPYQERYSFRAYGDDH 139

[Close]

BLAST of Clc02G02260 vs. TAIR 10
Match: AT2G32650.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 61  TIKGTHNIRAMRIEKPLEELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQ 120
           +++    +  M+ EKPLEELYN++VERKVS+ RL +LGVSRWS+WKTGKCKLPWDWQ DQ
Sbjct: 24  SVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQ 83

Query: 121 LVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDD 177
           LVYIE+GEVRVVPEGS++YM F+AGDLVRYPKW EADLFFN PY ERY F+AYGDD
Sbjct: 84  LVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGDD 139

[Close]

BLAST of Clc02G02260 vs. TAIR 10
Match: AT2G32180.1 (plastid transcriptionally active 18 )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 61  TIKGTHNIRAMRIEKPLEELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQ 120
           +++    +  M+ EKPLEELYN++VERKVS+ RL +LGVSRWS+WKTGKCKLPWDWQ DQ
Sbjct: 24  SVQRAFRVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQ 83

Query: 121 LVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDD 177
           LVYIE+GEVRVVPEGS++YM F+AGDLVRYPKW EADLFFN PY ERY F+AYGDD
Sbjct: 84  LVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGDD 139

[Close]

BLAST of Clc02G02260 vs. TAIR 10
Match: AT2G32650.2 (RmlC-like cupins superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 61  TIKGTHNIRAMRIEKPLEELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQ 120
           +++    +  M+ EKPLEELYN++VERKVS+ RL +LGVSRWS+WKTGKCKLPWDWQ DQ
Sbjct: 24  SVQRAFKVTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQ 83

Query: 121 LVYIEEGEVRVVPEGSQQYMSFVAGDLVRYPKWFEADLFFNGPYQERYSFRAYGDD 177
           LVYIE+GEVRVVPEGS++YM F+AGDLVRYPKW EADLFFN PY ERY F+AYGDD
Sbjct: 84  LVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGDD 139

[Close]

BLAST of Clc02G02260 vs. TAIR 10
Match: AT4G10300.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 32/101 (31.68%), Postives = 47/101 (46.53%), Query Frame = 0


Query: 70  AMRIEKPLEELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEV 129
           A  I     E   I +E+   E +L+QLGV  W  W     K PW + A +  Y+ +G+V
Sbjct: 33  AAAIRAESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKV 92

Query: 130 RVVPEGSQQYMSFVAGDLVRYPKWFEADLFFNGPYQERYSF 171
           +V P GS + +   AGD V +PK        +    + Y F
Sbjct: 93  KVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 133

[Close]

BLAST of Clc02G02260 vs. TAIR 10
Match: AT4G10290.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.2e-10
Identity = 26/77 (33.77%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 79  ELYNIRVERKVSEDRLSQLGVSRWSIWKTGKCKLPWDWQADQLVYIEEGEVRVVPEGSQ- 138
           E++ ++V R+ S+ +L++LGV+ W +W++   K PW ++  + +Y  EG+++V  E    
Sbjct: 16  EIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHK 75

Query: 139 --QYMSFVAGDLVRYPK 153
             + + FVAGDLV +P+
Sbjct: 76  EGEALEFVAGDLVVFPQ 92

The following BLAST results are available for this feature:

BLAST of Clc02G02260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589149.1	2.1e-75	90.00	hypothetical protein SDJN03_17714, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7022849.1	2.1e-75	90.00	hypothetical protein SDJN02_16585, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008455463.1	1.3e-72	93.06	PREDICTED: uncharacterized protein LOC103495620 [Cucumis melo]	[more]
KAA0040221.1	4.8e-72	93.62	RmlC-like cupins superfamily protein [Cucumis melo var. makuwa] >TYK07127.1 RmlC...	[more]
XP_038887936.1	9.0e-71	93.06	uncharacterized protein LOC120077906 [Benincasa hispida]	[more]

BLAST of Clc02G02260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G02260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0I6	6.1e-73	93.06	uncharacterized protein LOC103495620 OS=Cucumis melo OX=3656 GN=LOC103495620 PE=...	[more]
A0A5D3C5M8	2.3e-72	93.62	RmlC-like cupins superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1EXN3	2.4e-69	90.28	uncharacterized protein LOC111437127 OS=Cucurbita moschata OX=3662 GN=LOC1114371...	[more]
A0A6J1JN52	2.0e-68	88.89	uncharacterized protein LOC111486192 OS=Cucurbita maxima OX=3661 GN=LOC111486192...	[more]
A0A0A0K6T4	3.8e-67	88.89	Cupin_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041900 PE=...	[more]

BLAST of Clc02G02260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32650.1	1.4e-50	74.14	RmlC-like cupins superfamily protein	[more]
AT2G32180.1	1.4e-50	74.14	plastid transcriptionally active 18	[more]
AT2G32650.2	1.4e-50	74.14	RmlC-like cupins superfamily protein	[more]
AT4G10300.1	2.5e-10	31.68	RmlC-like cupins superfamily protein	[more]
AT4G10290.1	7.2e-10	33.77	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008579	(S)-ureidoglycine aminohydrolase, cupin-3 domain	PFAM	PF05899	Cupin_3	coord: 94..165 e-value: 9.3E-22 score: 76.5
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 71..170 e-value: 1.9E-20 score: 74.4
None	No IPR available	PANTHER	PTHR33271:SF28	BNAC04G43140D PROTEIN	coord: 32..176
None	No IPR available	PANTHER	PTHR33271	OS04G0445200 PROTEIN	coord: 32..176
None	No IPR available	CDD	cd02227	cupin_TM1112-like	coord: 101..170 e-value: 9.83367E-22 score: 81.858
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 87..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G02260.1	Clc02G02260.1	mRNA