Clc02G02130 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G02130
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr02: 1988387 .. 1990091 (+)
RNA-Seq ExpressionClc02G02130
SyntenyClc02G02130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATGCCTCATCAACAATTGAAAAAATGTATGTGTATAACTTGTTTATTTCAATGGTTGTATTAGTAAAGATAGAGCATTGGAAGGTGTTGGTGAAAAGGTGAATGAGACCGATCTGAGAGTTTGGTTAATGTTATGCCACACTCCTCCGAGTGGTTATTGCAACTTCTTCAACGGTTCCTCAAGAACTCAATTAAAATCCCACAAATCCACGCCTTTCTACTCACCGACGGCCATCTCTTCAACCAATCCCAAACTTCCTCTAATCAAAAATGCCTCACCACTCTTCTCTACAACACTCTCATCAGAGCCTATCTAACCTTCAACCGCCCTCGCTCCGCCCTCCTTCTCTACACCCAAATGCTCTCCCACCAAACCAAACCCAACGCCCACACTTTCCCTTCAATCATCAAATCCGCCACCATTTCTTCCCCTCCTCTCGCCAAATTGATCCACGCTCATGCTGTCAAGATCGGCGTTCTCACCGACCCCTTTGTGCTCACATCCTTCCTTGCCTCTTACGCCGACCTTCGTCAACTGAGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCCTTTAACTCTATGCTTGATGCGTTTGTTAAAAATGGGGATTTGGGGTCTGCTGTTTTGATGTTTAGGTCCATGCCAGAGCGCGATGTCGTTTCTTGGACTAGTGTTGTTAATGGGTTTTGGTGGAATGGGCGTTTTCTTGAGGCCATTTGGTTTTTTGAGATGATGATGATGAATGGTTCGGTGAAGCCGAATGAAGCTACGTTTGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTGAAGGAGTTCTTTGTCGAGGGAAAGAAGTACATGCTTACATTATTAGAAATGAGGGTGAGTTGAGTGTTTTTGTAGGGACGGCGTTGATAGATTTTTATGGGAAGATGGGATTATTAGGAAGTGCGAGAATTGTTTTTAATCAAATGAAGAACAGGGAGGTCTGTGCTTGGAATGCAATGATCTCTTCACTTGCATCCAATAGTAGAGAAACAGAAGCGTTAGACCTATTTGCTAAAATGAAGGTTGAATCACATCCTAATGAGGTTACATTTGTTGTGATTCTCACAGCATGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTCCGATCAATGTCGAATGATTTCTCAATTGTACCAATTACTGAGCACTATGTCTGTGTGGTTGATCTCTTAGGCAAAGCAGGGCTTTTGAGAGAGGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCCGATGCTTCTGTTTTGGGAGCCCTTTTGAGTGCTTGTAAGATTCATGGAGCCACTGAACTGGGAAATGAAGTGGGAAGAAGATTGCTTGTGATACAGCCACGACATTGCGGTCGGTACGTGACTTTGGCAAGTATAAATGCTGGAGCGGAGAAATGGAATCATGCCGCAGTTATAAGAAGAGTAATGGCAGATGCCAGGATTCAGAAAGCTCCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGTTAGTATCCTCCTCTTGATCTTGAAACTCTAAAATAGTATCTGTACAAGAAAAGTGTTGATCATTTTTCCAGTGAAACTGTCTTATTGATTTGAATTTACTATGAATGCTTTGGGTATCTGCAGCATGAAATGGTAAAATATAGAATTATTGATTTGAATTTAC

mRNA sequence

TGATGCCTCATCAACAATTGAAAAAATGTATGTGTATAACTTGTTTATTTCAATGGTTGTATTAGTAAAGATAGAGCATTGGAAGGTGTTGGTGAAAAGGTGAATGAGACCGATCTGAGAGTTTGGTTAATGTTATGCCACACTCCTCCGAGTGGTTATTGCAACTTCTTCAACGGTTCCTCAAGAACTCAATTAAAATCCCACAAATCCACGCCTTTCTACTCACCGACGGCCATCTCTTCAACCAATCCCAAACTTCCTCTAATCAAAAATGCCTCACCACTCTTCTCTACAACACTCTCATCAGAGCCTATCTAACCTTCAACCGCCCTCGCTCCGCCCTCCTTCTCTACACCCAAATGCTCTCCCACCAAACCAAACCCAACGCCCACACTTTCCCTTCAATCATCAAATCCGCCACCATTTCTTCCCCTCCTCTCGCCAAATTGATCCACGCTCATGCTGTCAAGATCGGCGTTCTCACCGACCCCTTTGTGCTCACATCCTTCCTTGCCTCTTACGCCGACCTTCGTCAACTGAGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCCTTTAACTCTATGCTTGATGCGTTTGTTAAAAATGGGGATTTGGGGTCTGCTGTTTTGATGTTTAGGTCCATGCCAGAGCGCGATGTCGTTTCTTGGACTAGTGTTGTTAATGGGTTTTGGTGGAATGGGCGTTTTCTTGAGGCCATTTGGTTTTTTGAGATGATGATGATGAATGGTTCGGTGAAGCCGAATGAAGCTACGTTTGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTGAAGGAGTTCTTTGTCGAGGGAAAGAAGTACATGCTTACATTATTAGAAATGAGGGTGAGTTGAGTGTTTTTGTAGGGACGGCGTTGATAGATTTTTATGGGAAGATGGGATTATTAGGAAGTGCGAGAATTGTTTTTAATCAAATGAAGAACAGGGAGGTCTGTGCTTGGAATGCAATGATCTCTTCACTTGCATCCAATAGTAGAGAAACAGAAGCGTTAGACCTATTTGCTAAAATGAAGGTTGAATCACATCCTAATGAGGTTACATTTGTTGTGATTCTCACAGCATGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTCCGATCAATGTCGAATGATTTCTCAATTGTACCAATTACTGAGCACTATGTCTGTGTGGTTGATCTCTTAGGCAAAGCAGGGCTTTTGAGAGAGGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCCGATGCTTCTGTTTTGGGAGCCCTTTTGAGTGCTTGTAAGATTCATGGAGCCACTGAACTGGGAAATGAAGTGGGAAGAAGATTGCTTGTGATACAGCCACGACATTGCGGTCGGTACGTGACTTTGGCAAGTATAAATGCTGGAGCGGAGAAATGGAATCATGCCGCAGTTATAAGAAGAGTAATGGCAGATGCCAGGATTCAGAAAGCTCCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGTTAGTATCCTCCTCTTGATCTTGAAACTCTAAAATAGTATCTGTACAAGAAAAGTGTTGATCATTTTTCCAGTGAAACTGTCTTATTGATTTGAATTTACTATGAATGCTTTGGGTATCTGCAGCATGAAATGGTAAAATATAGAATTATTGATTTGAATTTAC

Coding sequence (CDS)

ATGCCACACTCCTCCGAGTGGTTATTGCAACTTCTTCAACGGTTCCTCAAGAACTCAATTAAAATCCCACAAATCCACGCCTTTCTACTCACCGACGGCCATCTCTTCAACCAATCCCAAACTTCCTCTAATCAAAAATGCCTCACCACTCTTCTCTACAACACTCTCATCAGAGCCTATCTAACCTTCAACCGCCCTCGCTCCGCCCTCCTTCTCTACACCCAAATGCTCTCCCACCAAACCAAACCCAACGCCCACACTTTCCCTTCAATCATCAAATCCGCCACCATTTCTTCCCCTCCTCTCGCCAAATTGATCCACGCTCATGCTGTCAAGATCGGCGTTCTCACCGACCCCTTTGTGCTCACATCCTTCCTTGCCTCTTACGCCGACCTTCGTCAACTGAGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCCTTTAACTCTATGCTTGATGCGTTTGTTAAAAATGGGGATTTGGGGTCTGCTGTTTTGATGTTTAGGTCCATGCCAGAGCGCGATGTCGTTTCTTGGACTAGTGTTGTTAATGGGTTTTGGTGGAATGGGCGTTTTCTTGAGGCCATTTGGTTTTTTGAGATGATGATGATGAATGGTTCGGTGAAGCCGAATGAAGCTACGTTTGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTGAAGGAGTTCTTTGTCGAGGGAAAGAAGTACATGCTTACATTATTAGAAATGAGGGTGAGTTGAGTGTTTTTGTAGGGACGGCGTTGATAGATTTTTATGGGAAGATGGGATTATTAGGAAGTGCGAGAATTGTTTTTAATCAAATGAAGAACAGGGAGGTCTGTGCTTGGAATGCAATGATCTCTTCACTTGCATCCAATAGTAGAGAAACAGAAGCGTTAGACCTATTTGCTAAAATGAAGGTTGAATCACATCCTAATGAGGTTACATTTGTTGTGATTCTCACAGCATGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTCCGATCAATGTCGAATGATTTCTCAATTGTACCAATTACTGAGCACTATGTCTGTGTGGTTGATCTCTTAGGCAAAGCAGGGCTTTTGAGAGAGGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCCGATGCTTCTGTTTTGGGAGCCCTTTTGAGTGCTTGTAAGATTCATGGAGCCACTGAACTGGGAAATGAAGTGGGAAGAAGATTGCTTGTGATACAGCCACGACATTGCGGTCGGTACGTGACTTTGGCAAGTATAAATGCTGGAGCGGAGAAATGGAATCATGCCGCAGTTATAAGAAGAGTAATGGCAGATGCCAGGATTCAGAAAGCTCCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGTTAGTATCCTCCTCTTGA

Protein sequence

MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNSRETEALDLFAKMKVESHPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS
Homology
BLAST of Clc02G02130 vs. NCBI nr
Match: XP_038887445.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Benincasa hispida])

HSP 1 Score: 863.2 bits (2229), Expect = 1.0e-246
Identity = 434/469 (92.54%), Postives = 448/469 (95.52%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           MPHSS+WLLQLLQRFLKN IKIPQIHA LLTDGH FN+SQTSSN K +TTLLYNTLIRAY
Sbjct: 1   MPHSSKWLLQLLQRFLKNPIKIPQIHALLLTDGHFFNKSQTSSNPKWVTTLLYNTLIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           LTFNRP SALLLYTQMLSH TKPNAHTFPSIIKSATISSP LAKLIHAHA KIGVLTDPF
Sbjct: 61  LTFNRPCSALLLYTQMLSHHTKPNAHTFPSIIKSATISSPFLAKLIHAHAFKIGVLTDPF 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF+ SYA+LR+L NARKVFDEIT PCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD
Sbjct: 121 VLTSFVGSYAELRELGNARKVFDEITHPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTSVVNGFWWNGRFLEAIWFFEMMM NGSVKPNEAT+VSVLSSCANLDAEGVLCRGK
Sbjct: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMKNGSVKPNEATYVSVLSSCANLDAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           EVHAYIIR EGELSVF+GTALIDFYGKMGLLGSARIVFNQMKNREVC WNAMISS ASN+
Sbjct: 241 EVHAYIIRTEGELSVFIGTALIDFYGKMGLLGSARIVFNQMKNREVCTWNAMISSFASNN 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RETEALDLFAKMKVE  HPNEVTFV ILTACARGKLVELGLQLFRSMSNDFSIVPITEHY
Sbjct: 301 RETEALDLFAKMKVEGIHPNEVTFVAILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VCVVDLLGKAGLL+EA +F+ESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLV+QP
Sbjct: 361 VCVVDLLGKAGLLKEAIKFMESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNL 469
           RHCGRYVTLASINAGAEKWN AAV+RRVMADARIQKAPAYSRVDPMQNL
Sbjct: 421 RHCGRYVTLASINAGAEKWNRAAVLRRVMADARIQKAPAYSRVDPMQNL 469

BLAST of Clc02G02130 vs. NCBI nr
Match: XP_008455452.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis melo])

HSP 1 Score: 839.7 bits (2168), Expect = 1.2e-239
Identity = 424/475 (89.26%), Postives = 438/475 (92.21%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           M HSSEWLLQLLQRFLKNS KIPQIHA LLT GHLFN SQTSSN KCLTTLLYNTLIRAY
Sbjct: 1   MSHSSEWLLQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLTTLLYNTLIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           LT NRPR ALLLYTQMLS QTKPN HTFPSIIKSATI SP L KLIHAHA KIGVLTDP 
Sbjct: 61  LTLNRPRFALLLYTQMLSQQTKPNFHTFPSIIKSATIYSPLLPKLIHAHAFKIGVLTDPV 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF++SY DLR+L NARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAV MFR MPERD
Sbjct: 121 VLTSFVSSYGDLRELGNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVFMFRYMPERD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTSVVNGFWWNGRFLEA+WFF+MMMM+GSVKPNEAT+VSVLSSCANLDAEGVLCRGK
Sbjct: 181 VVSWTSVVNGFWWNGRFLEALWFFQMMMMSGSVKPNEATYVSVLSSCANLDAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           EVHAYIIRNEGE SVF+GTALIDFYGKMGLLG AR VFNQMK REVC WNAMISS ASNS
Sbjct: 241 EVHAYIIRNEGEFSVFIGTALIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNS 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RETEALDLFA MKVE  HPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHY
Sbjct: 301 RETEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VCVVDLLGKAGLLREATE IESMPF+PDASVLGALLSACKIHGA ELGNEVGRRLLV+QP
Sbjct: 361 VCVVDLLGKAGLLREATEIIESMPFDPDASVLGALLSACKIHGAIELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           RHCGRYVTLAS+NAGAEKWN AAVIR VMADARIQK PAYSRVDPMQNLVL+S S
Sbjct: 421 RHCGRYVTLASMNAGAEKWNRAAVIRSVMADARIQKTPAYSRVDPMQNLVLISPS 475

BLAST of Clc02G02130 vs. NCBI nr
Match: XP_004144596.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis sativus])

HSP 1 Score: 827.4 bits (2136), Expect = 6.3e-236
Identity = 418/473 (88.37%), Postives = 434/473 (91.75%), Query Frame = 0

Query: 3   HSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAYLT 62
           H SEWLLQLLQRFLKNS KIPQIHA LLT GHLFN SQTSSN KCL TLLYNTLIRAYL 
Sbjct: 5   HPSEWLLQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLITLLYNTLIRAYLN 64

Query: 63  FNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPFVL 122
           FNRPR ALLLYTQMLS QTKPN HTFPSIIKSATI S  L KLIHAHA KIGVLTDP VL
Sbjct: 65  FNRPRFALLLYTQMLSQQTKPNFHTFPSIIKSATICSSLLPKLIHAHAFKIGVLTDPVVL 124

Query: 123 TSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERDVV 182
           TSF++SYADLR+L+NARKVFDEIT+PCIVAFNSMLDAFVKNGDLGSAV MFRSMPE DVV
Sbjct: 125 TSFVSSYADLRELANARKVFDEITNPCIVAFNSMLDAFVKNGDLGSAVFMFRSMPEHDVV 184

Query: 183 SWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGKEV 242
           SWTSV+NGFWWNGRFLEA+WFF +MMM+GSVKPNEAT+VSVLSS ANLDAEGVLCRGKEV
Sbjct: 185 SWTSVINGFWWNGRFLEALWFFHVMMMSGSVKPNEATYVSVLSSSANLDAEGVLCRGKEV 244

Query: 243 HAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNSRE 302
           HAYIIRNEGE SVF+GT LIDFYGKMGLLG AR VFNQMK REVC WNAMISS ASN RE
Sbjct: 245 HAYIIRNEGEFSVFIGTGLIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNGRE 304

Query: 303 TEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVC 362
           TEALDLFA MKVE  HPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVC
Sbjct: 305 TEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVC 364

Query: 363 VVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQPRH 422
           VVDLLGKAGLLREATEFIESMPF+PDASVLGALLSACKIHGATELGNEVGRRLL +QPRH
Sbjct: 365 VVDLLGKAGLLREATEFIESMPFDPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRH 424

Query: 423 CGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           CGRYVTLAS+NAGAEKWN AAVIRRVMADARIQK PAYSRVDPMQNLVLVS S
Sbjct: 425 CGRYVTLASMNAGAEKWNRAAVIRRVMADARIQKTPAYSRVDPMQNLVLVSPS 477

BLAST of Clc02G02130 vs. NCBI nr
Match: KAG6589154.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 810.1 bits (2091), Expect = 1.0e-230
Identity = 404/475 (85.05%), Postives = 439/475 (92.42%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           MP+SSEWLLQLLQRFLKNS KI QIHA L+TD HL N+ Q   N K +++LLYN LIR Y
Sbjct: 1   MPYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPLNPKWISSLLYNALIRGY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           L+FNRP S L+LYTQML+H+TKPNAHTFPSIIKSATISSP L KLIHAHAVKIGV++DPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAHTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF++ YA+LR+L NARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAVL FRSM +RD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTS+V+GFWWNGRFLEAI FFEMMMMNG VKPNEAT+VSVLSSCANL AEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           E+HAYIIRNEGELSVF+GTAL+DFYGKMGLLGSAR VFNQMKNRE+CAWNAMISSL+SN 
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RE EAL+LFA MKVE   PNEVTFV ILTACARGKLVE GL+LFRSMSNDFSIVPI EHY
Sbjct: 301 REREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VC+VDLLGKAGLLREATEFIESMPF+PDASVLGALL+AC IHGATELGNEVGRRLLV+QP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           RHCGRYVTLASINAGAEKW+HAAVIRRVMADARIQKAPAYSRVDPMQNLV +SSS
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARIQKAPAYSRVDPMQNLVPMSSS 475

BLAST of Clc02G02130 vs. NCBI nr
Match: XP_022930726.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moschata] >XP_022930727.1 putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moschata])

HSP 1 Score: 800.4 bits (2066), Expect = 8.2e-228
Identity = 401/475 (84.42%), Postives = 438/475 (92.21%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           M +SSEWLLQLLQRFLKNS KI QIHA L+TD HL N+ Q  SN K +++LLYN LIRAY
Sbjct: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           L+FNRP S L+LYTQML+H+TKPNA+TFPSIIKSATISSP L KLIHAHAVKIGV++DPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF++ YA+LR+L NARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAVL FRSM +RD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTS+V+GF WNGRFLEAI FFEMMMMNG VKPNEAT+VSVLSSCANL AEGVLCRGK
Sbjct: 181 VVSWTSIVHGFCWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           E+HAYIIRNEGELSVF+GTAL+DFYGKMGLLGSAR VFNQMKNRE+CAWNAMISSL+SN 
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RE EAL+LFA MK E   PNEVTFV ILTACARGKLVE GL+LFRSMSNDFSIVPI EHY
Sbjct: 301 REREALELFASMKAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VC+VDLLGKAGLLREATEFIESMPF+PDA+VLGALL+AC IHGATELGNEVGRRLLV+QP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           RHCGRYVTLASINAGAEKW+HAAVIRRVMADARIQKAPAYSRVDPMQNLV +SSS
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARIQKAPAYSRVDPMQNLVPMSSS 475

BLAST of Clc02G02130 vs. ExPASy Swiss-Prot
Match: Q9SY75 (Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E71 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 8.2e-122
Identity = 235/461 (50.98%), Postives = 318/461 (68.98%), Query Frame = 0

Query: 4   SSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAYLTF 63
           S E  L LLQRFL +S +I QIH  LLT   L      +S  K  T  +YNTLIR+YLT 
Sbjct: 12  SLEDALHLLQRFLYSSNQIKQIHTVLLTSNAL-----VASRWK--TKCVYNTLIRSYLTT 71

Query: 64  NRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATIS-SPPLAKLIHAHAVKIGVLTDPFVL 123
              +++L L+T ML+   +PN  TFPS+IK+A  S S      +H  A+K G L DPFV 
Sbjct: 72  GEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 131

Query: 124 TSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERDVV 183
           TSF+  Y ++  L ++RK+FD+I +PC+VA NS+LDA  +NG++  A   F+ MP  DVV
Sbjct: 132 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 191

Query: 184 SWTSVVNGFWWNGRFLEAIWFFEMMMMN--GSVKPNEATFVSVLSSCANLDAEGVLCRGK 243
           SWT+V+NGF   G   +A+  F  M+ N    + PNEATFVSVLSSCAN D  G+   GK
Sbjct: 192 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GK 251

Query: 244 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 303
           ++H Y++  E  L+  +GTAL+D YGK G L  A  +F+Q+++++VCAWNA+IS+LASN 
Sbjct: 252 QIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNG 311

Query: 304 RETEALDLFAKMKVE-SHPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 363
           R  +AL++F  MK    HPN +T + ILTACAR KLV+LG+QLF S+ +++ I+P +EHY
Sbjct: 312 RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHY 371

Query: 364 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 423
            CVVDL+G+AGLL +A  FI+S+PFEPDASVLGALL ACKIH  TELGN VG++L+ +QP
Sbjct: 372 GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQP 431

Query: 424 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYS 461
           +HCG+YV L++ NA    W+ A  +R+ M +A I+K PAYS
Sbjct: 432 QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464

BLAST of Clc02G02130 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.0e-79
Identity = 163/415 (39.28%), Postives = 243/415 (58.55%), Query Frame = 0

Query: 50  TLLYNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKS-ATISSPPLAKLIHA 109
           T L+N +IR +   + P  +LLLY +ML      NA+TFPS++K+ + +S+      IHA
Sbjct: 80  TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139

Query: 110 HAVKIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGS 169
              K+G   D + + S + SYA       A  +FD I +P  V++NS++  +VK G +  
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199

Query: 170 AVLMFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCA 229
           A+ +FR M E++ +SWT++++G+       EA+  F   M N  V+P+  +  + LS+CA
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH-EMQNSDVEPDNVSLANALSACA 259

Query: 230 NLDAEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCA 289
            L   G L +GK +H+Y+ +    +   +G  LID Y K G +  A  VF  +K + V A
Sbjct: 260 QL---GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 319

Query: 290 WNAMISSLASNSRETEALDLFAKM-KVESHPNEVTFVVILTACARGKLVELGLQLFRSMS 349
           W A+IS  A +    EA+  F +M K+   PN +TF  +LTAC+   LVE G  +F SM 
Sbjct: 320 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 379

Query: 350 NDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELG 409
            D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A + GALL AC+IH   ELG
Sbjct: 380 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 439

Query: 410 NEVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRV 463
            E+G  L+ I P H GRYV  A+I+A  +KW+ AA  RR+M +  + K P  S +
Sbjct: 440 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490

BLAST of Clc02G02130 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 7.3e-78
Identity = 166/429 (38.69%), Postives = 251/429 (58.51%), Query Frame = 0

Query: 35  LFNQSQTSSNQKCLTTLLYNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSII-K 94
           LF+  Q S       T LYN LI+AY   ++P  +++LY  +     +P+ HTF  I   
Sbjct: 38  LFDHHQNS------CTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 97

Query: 95  SATISSPPLAKLIHAHAVKIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAF 154
           SA+ SS    +L+H+   + G  +D F  T+ + +YA L  L  AR+VFDE++   +  +
Sbjct: 98  SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 157

Query: 155 NSMLDAFVKNGDLGSAVLMFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSV 214
           N+M+  + + GD+ +A+ +F SMP ++V SWT+V++GF  NG + EA+  F  M  + SV
Sbjct: 158 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 217

Query: 215 KPNEATFVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGS 274
           KPN  T VSVL +CANL   G L  G+ +  Y   N    +++V  A I+ Y K G++  
Sbjct: 218 KPNHITVVSVLPACANL---GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 277

Query: 275 ARIVFNQMKN-REVCAWNAMISSLASNSRETEALDLFAKMKVESH-PNEVTFVVILTACA 334
           A+ +F ++ N R +C+WN+MI SLA++ +  EAL LFA+M  E   P+ VTFV +L AC 
Sbjct: 278 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 337

Query: 335 RGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVL 394
            G +V  G +LF+SM     I P  EHY C++DLLG+ G L+EA + I++MP +PDA V 
Sbjct: 338 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 397

Query: 395 GALLSACKIHGATELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADA 454
           G LL AC  HG  E+       L  ++P + G  V +++I A  EKW+    +R++M   
Sbjct: 398 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 457

Query: 455 RIQKAPAYS 461
            + KA  YS
Sbjct: 458 TMTKAAGYS 457

BLAST of Clc02G02130 vs. ExPASy Swiss-Prot
Match: P0C8Q7 (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E105 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.6e-77
Identity = 162/415 (39.04%), Postives = 252/415 (60.72%), Query Frame = 0

Query: 53  YNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSAT-ISSPPLAKLIHAHAV 112
           +N +IR +     P  ++ +Y QML     P+  T+P ++KS++ +S+  L   +H   V
Sbjct: 76  WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135

Query: 113 KIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVL 172
           K G+  D F+  + +  Y   R  ++ARK+FDE+    +V +NS+LDA+ K+GD+ SA L
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195

Query: 173 MFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLD 232
           +F  M ERDVV+W+S+++G+   G + +A+  F+ MM  GS K NE T VSV+ +CA+L 
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL- 255

Query: 233 AEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQ--MKNREVCAW 292
             G L RGK VH YI+     L+V + T+LID Y K G +G A  VF +  +K  +   W
Sbjct: 256 --GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 315

Query: 293 NAMISSLASNSRETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSN 352
           NA+I  LAS+    E+L LF KM+     P+E+TF+ +L AC+ G LV+     F+S+  
Sbjct: 316 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-K 375

Query: 353 DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGN 412
           +    P +EHY C+VD+L +AGL+++A +FI  MP +P  S+LGALL+ C  HG  EL  
Sbjct: 376 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 435

Query: 413 EVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVD 464
            VG++L+ +QP + GRYV LA++ A  +++  A  +R  M    ++K   +S +D
Sbjct: 436 TVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILD 486

BLAST of Clc02G02130 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.3e-71
Identity = 161/470 (34.26%), Postives = 255/470 (54.26%), Query Frame = 0

Query: 14  RFLKNSIKIPQIHAFLLTDGH------LFNQSQTSSNQKCL-------------TTLLYN 73
           R  KN   +P IHA ++   H      +F   +  S    +                LY 
Sbjct: 37  RSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYT 96

Query: 74  TLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIG 133
            +I  +++  R    + LY +M+ +   P+ +   S++K+  +    + + IHA  +K+G
Sbjct: 97  AMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLK---VCREIHAQVLKLG 156

Query: 134 VLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFR 193
             +   V    +  Y    +L NA+K+FDE+ D   VA   M++ + + G +  A+ +F+
Sbjct: 157 FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQ 216

Query: 194 SMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEG 253
            +  +D V WT++++G   N    +A+  F  M M  +V  NE T V VLS+C++L   G
Sbjct: 217 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSACSDL---G 276

Query: 254 VLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMIS 313
            L  G+ VH+++     ELS FVG ALI+ Y + G +  AR VF  M++++V ++N MIS
Sbjct: 277 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 336

Query: 314 SLASNSRETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIV 373
            LA +    EA++ F  M      PN+VT V +L AC+ G L+++GL++F SM   F++ 
Sbjct: 337 GLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVE 396

Query: 374 PITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRR 433
           P  EHY C+VDLLG+ G L EA  FIE++P EPD  +LG LLSACKIHG  ELG ++ +R
Sbjct: 397 PQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKR 456

Query: 434 LLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVD 464
           L   +    G YV L+++ A + KW  +  IR  M D+ I+K P  S ++
Sbjct: 457 LFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499

BLAST of Clc02G02130 vs. ExPASy TrEMBL
Match: A0A1S3C130 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo OX=3656 GN=LOC103495611 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 5.9e-240
Identity = 424/475 (89.26%), Postives = 438/475 (92.21%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           M HSSEWLLQLLQRFLKNS KIPQIHA LLT GHLFN SQTSSN KCLTTLLYNTLIRAY
Sbjct: 1   MSHSSEWLLQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLTTLLYNTLIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           LT NRPR ALLLYTQMLS QTKPN HTFPSIIKSATI SP L KLIHAHA KIGVLTDP 
Sbjct: 61  LTLNRPRFALLLYTQMLSQQTKPNFHTFPSIIKSATIYSPLLPKLIHAHAFKIGVLTDPV 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF++SY DLR+L NARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAV MFR MPERD
Sbjct: 121 VLTSFVSSYGDLRELGNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVFMFRYMPERD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTSVVNGFWWNGRFLEA+WFF+MMMM+GSVKPNEAT+VSVLSSCANLDAEGVLCRGK
Sbjct: 181 VVSWTSVVNGFWWNGRFLEALWFFQMMMMSGSVKPNEATYVSVLSSCANLDAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           EVHAYIIRNEGE SVF+GTALIDFYGKMGLLG AR VFNQMK REVC WNAMISS ASNS
Sbjct: 241 EVHAYIIRNEGEFSVFIGTALIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNS 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RETEALDLFA MKVE  HPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHY
Sbjct: 301 RETEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VCVVDLLGKAGLLREATE IESMPF+PDASVLGALLSACKIHGA ELGNEVGRRLLV+QP
Sbjct: 361 VCVVDLLGKAGLLREATEIIESMPFDPDASVLGALLSACKIHGAIELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           RHCGRYVTLAS+NAGAEKWN AAVIR VMADARIQK PAYSRVDPMQNLVL+S S
Sbjct: 421 RHCGRYVTLASMNAGAEKWNRAAVIRSVMADARIQKTPAYSRVDPMQNLVLISPS 475

BLAST of Clc02G02130 vs. ExPASy TrEMBL
Match: A0A0A0K5I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.0e-236
Identity = 418/473 (88.37%), Postives = 434/473 (91.75%), Query Frame = 0

Query: 3   HSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAYLT 62
           H SEWLLQLLQRFLKNS KIPQIHA LLT GHLFN SQTSSN KCL TLLYNTLIRAYL 
Sbjct: 5   HPSEWLLQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLITLLYNTLIRAYLN 64

Query: 63  FNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPFVL 122
           FNRPR ALLLYTQMLS QTKPN HTFPSIIKSATI S  L KLIHAHA KIGVLTDP VL
Sbjct: 65  FNRPRFALLLYTQMLSQQTKPNFHTFPSIIKSATICSSLLPKLIHAHAFKIGVLTDPVVL 124

Query: 123 TSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERDVV 182
           TSF++SYADLR+L+NARKVFDEIT+PCIVAFNSMLDAFVKNGDLGSAV MFRSMPE DVV
Sbjct: 125 TSFVSSYADLRELANARKVFDEITNPCIVAFNSMLDAFVKNGDLGSAVFMFRSMPEHDVV 184

Query: 183 SWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGKEV 242
           SWTSV+NGFWWNGRFLEA+WFF +MMM+GSVKPNEAT+VSVLSS ANLDAEGVLCRGKEV
Sbjct: 185 SWTSVINGFWWNGRFLEALWFFHVMMMSGSVKPNEATYVSVLSSSANLDAEGVLCRGKEV 244

Query: 243 HAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNSRE 302
           HAYIIRNEGE SVF+GT LIDFYGKMGLLG AR VFNQMK REVC WNAMISS ASN RE
Sbjct: 245 HAYIIRNEGEFSVFIGTGLIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNGRE 304

Query: 303 TEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVC 362
           TEALDLFA MKVE  HPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVC
Sbjct: 305 TEALDLFATMKVEGIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVC 364

Query: 363 VVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQPRH 422
           VVDLLGKAGLLREATEFIESMPF+PDASVLGALLSACKIHGATELGNEVGRRLL +QPRH
Sbjct: 365 VVDLLGKAGLLREATEFIESMPFDPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRH 424

Query: 423 CGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           CGRYVTLAS+NAGAEKWN AAVIRRVMADARIQK PAYSRVDPMQNLVLVS S
Sbjct: 425 CGRYVTLASMNAGAEKWNRAAVIRRVMADARIQKTPAYSRVDPMQNLVLVSPS 477

BLAST of Clc02G02130 vs. ExPASy TrEMBL
Match: A0A6J1ERE5 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita moschata OX=3662 GN=LOC111437118 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 4.0e-228
Identity = 401/475 (84.42%), Postives = 438/475 (92.21%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           M +SSEWLLQLLQRFLKNS KI QIHA L+TD HL N+ Q  SN K +++LLYN LIRAY
Sbjct: 1   MHYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           L+FNRP S L+LYTQML+H+TKPNA+TFPSIIKSATISSP L KLIHAHAVKIGV++DPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF++ YA+LR+L NARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAVL FRSM +RD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTS+V+GF WNGRFLEAI FFEMMMMNG VKPNEAT+VSVLSSCANL AEGVLCRGK
Sbjct: 181 VVSWTSIVHGFCWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           E+HAYIIRNEGELSVF+GTAL+DFYGKMGLLGSAR VFNQMKNRE+CAWNAMISSL+SN 
Sbjct: 241 EIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RE EAL+LFA MK E   PNEVTFV ILTACARGKLVE GL+LFRSMSNDFSIVPI EHY
Sbjct: 301 REREALELFASMKAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VC+VDLLGKAGLLREATEFIESMPF+PDA+VLGALL+AC IHGATELGNEVGRRLLV+QP
Sbjct: 361 VCMVDLLGKAGLLREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           RHCGRYVTLASINAGAEKW+HAAVIRRVMADARIQKAPAYSRVDPMQNLV +SSS
Sbjct: 421 RHCGRYVTLASINAGAEKWSHAAVIRRVMADARIQKAPAYSRVDPMQNLVPMSSS 475

BLAST of Clc02G02130 vs. ExPASy TrEMBL
Match: A0A6J1JN92 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxima OX=3661 GN=LOC111486006 PE=4 SV=1)

HSP 1 Score: 795.8 bits (2054), Expect = 9.8e-227
Identity = 399/475 (84.00%), Postives = 434/475 (91.37%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           MP+SSEWLLQLLQRFLKNS KI QIHA L+TD HL N+ Q  SN K +++LLYN LIRAY
Sbjct: 1   MPYSSEWLLQLLQRFLKNSAKIQQIHALLITDDHLLNKPQAPSNPKWISSLLYNALIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           L+FNRP S L+LYTQML+H+TKPNAHTFPSIIKSATISSP L KLIHAHAVKIGV++DPF
Sbjct: 61  LSFNRPCSTLILYTQMLAHRTKPNAHTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPF 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           VLTSF++ YA+LR+L NARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAVL FRSM +RD
Sbjct: 121 VLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTS+V+GFWWNGRFLEAI FFEMMMMN  VKPNEAT+VSVLSSCANL AEGVLCRGK
Sbjct: 181 VVSWTSIVHGFWWNGRFLEAIGFFEMMMMNREVKPNEATYVSVLSSCANLAAEGVLCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           E+HAYIIRNEGELS F+GTAL+DFYGKMGLLGSAR VFNQMKNRE+CAWNAMISSL+SN 
Sbjct: 241 EIHAYIIRNEGELSAFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNG 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           R  EAL+LFA MKVE   PNEVTFV ILTACARGKLVE GL+LFRSMSNDF IVPI EHY
Sbjct: 301 RGREALELFASMKVEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFLIVPIAEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
           VC+VDLL KAGLLREATEFIESMPF+PDASVLGALL+AC IHGATELGNEVGRRLLV+QP
Sbjct: 361 VCMVDLLAKAGLLREATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLVLVSSS 475
           RHCGRYVTLASINA AEKW+ AAVIRRVMADARIQKAPAYSRVDPMQNLV +SSS
Sbjct: 421 RHCGRYVTLASINARAEKWSRAAVIRRVMADARIQKAPAYSRVDPMQNLVPMSSS 475

BLAST of Clc02G02130 vs. ExPASy TrEMBL
Match: A0A6J1C5N6 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Momordica charantia OX=3673 GN=LOC111007611 PE=4 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 2.0e-216
Identity = 387/470 (82.34%), Postives = 415/470 (88.30%), Query Frame = 0

Query: 1   MPHSSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAY 60
           MPHSSEWLLQLLQRFLKNSIKI QIHA L+T  HL   S+   N K + TLL+NTLIRAY
Sbjct: 1   MPHSSEWLLQLLQRFLKNSIKIQQIHALLITGSHLLCNSKAPPNPKWINTLLFNTLIRAY 60

Query: 61  LTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIGVLTDPF 120
           L+FN+PRSALLLYT MLSH   PNAHTFPSIIKSA +SS  L KLIHAHAVKIGVL+DPF
Sbjct: 61  LSFNQPRSALLLYTHMLSHHANPNAHTFPSIIKSAAVSSRFLGKLIHAHAVKIGVLSDPF 120

Query: 121 VLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERD 180
           V TSF+  Y+++ +L +ARKVFDEI +PCIVA NSMLDAFVKNGDLGSAVLMF SM ERD
Sbjct: 121 VQTSFVGYYSEVGELDDARKVFDEIPNPCIVALNSMLDAFVKNGDLGSAVLMFESMGERD 180

Query: 181 VVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEGVLCRGK 240
           VVSWTSVVNGF WNGRFLEAIWFFE MMM  SVKPNEATFVSVLSSCANLDAEG LCRGK
Sbjct: 181 VVSWTSVVNGFLWNGRFLEAIWFFE-MMMRSSVKPNEATFVSVLSSCANLDAEGALCRGK 240

Query: 241 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 300
           E+H YIIRNEGELSVFVGTALIDFYGKMG LGSA  VFNQMKNRE+CAWNAMISS ASN 
Sbjct: 241 EIHGYIIRNEGELSVFVGTALIDFYGKMGFLGSATNVFNQMKNREICAWNAMISSFASNG 300

Query: 301 RETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 360
           RETEALDLFA+MK +  HPNEVTFV ILTACARGKLVELGLQLF+SMSN+F++VPI EHY
Sbjct: 301 RETEALDLFAEMKAKGIHPNEVTFVAILTACARGKLVELGLQLFQSMSNNFALVPIAEHY 360

Query: 361 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 420
            CVVDLLGKAGLLREATEFI+SMPFEP  SVLGALLSACKIHGATELGNEVGRRLL +QP
Sbjct: 361 ACVVDLLGKAGLLREATEFIKSMPFEPAGSVLGALLSACKIHGATELGNEVGRRLLTMQP 420

Query: 421 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVDPMQNLV 470
           +HCGRYV LASINA AEKW+HAA IRRVMADA IQKAPAYSRV PM+NLV
Sbjct: 421 QHCGRYVALASINAEAEKWSHAAGIRRVMADAGIQKAPAYSRVVPMRNLV 469

BLAST of Clc02G02130 vs. TAIR 10
Match: AT1G10330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 438.7 bits (1127), Expect = 5.8e-123
Identity = 235/461 (50.98%), Postives = 318/461 (68.98%), Query Frame = 0

Query: 4   SSEWLLQLLQRFLKNSIKIPQIHAFLLTDGHLFNQSQTSSNQKCLTTLLYNTLIRAYLTF 63
           S E  L LLQRFL +S +I QIH  LLT   L      +S  K  T  +YNTLIR+YLT 
Sbjct: 12  SLEDALHLLQRFLYSSNQIKQIHTVLLTSNAL-----VASRWK--TKCVYNTLIRSYLTT 71

Query: 64  NRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATIS-SPPLAKLIHAHAVKIGVLTDPFVL 123
              +++L L+T ML+   +PN  TFPS+IK+A  S S      +H  A+K G L DPFV 
Sbjct: 72  GEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 131

Query: 124 TSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFRSMPERDVV 183
           TSF+  Y ++  L ++RK+FD+I +PC+VA NS+LDA  +NG++  A   F+ MP  DVV
Sbjct: 132 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 191

Query: 184 SWTSVVNGFWWNGRFLEAIWFFEMMMMN--GSVKPNEATFVSVLSSCANLDAEGVLCRGK 243
           SWT+V+NGF   G   +A+  F  M+ N    + PNEATFVSVLSSCAN D  G+   GK
Sbjct: 192 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GK 251

Query: 244 EVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMISSLASNS 303
           ++H Y++  E  L+  +GTAL+D YGK G L  A  +F+Q+++++VCAWNA+IS+LASN 
Sbjct: 252 QIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNG 311

Query: 304 RETEALDLFAKMKVE-SHPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIVPITEHY 363
           R  +AL++F  MK    HPN +T + ILTACAR KLV+LG+QLF S+ +++ I+P +EHY
Sbjct: 312 RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHY 371

Query: 364 VCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQP 423
            CVVDL+G+AGLL +A  FI+S+PFEPDASVLGALL ACKIH  TELGN VG++L+ +QP
Sbjct: 372 GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQP 431

Query: 424 RHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYS 461
           +HCG+YV L++ NA    W+ A  +R+ M +A I+K PAYS
Sbjct: 432 QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464

BLAST of Clc02G02130 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 2.1e-80
Identity = 163/415 (39.28%), Postives = 243/415 (58.55%), Query Frame = 0

Query: 50  TLLYNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKS-ATISSPPLAKLIHA 109
           T L+N +IR +   + P  +LLLY +ML      NA+TFPS++K+ + +S+      IHA
Sbjct: 80  TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139

Query: 110 HAVKIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGS 169
              K+G   D + + S + SYA       A  +FD I +P  V++NS++  +VK G +  
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199

Query: 170 AVLMFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCA 229
           A+ +FR M E++ +SWT++++G+       EA+  F   M N  V+P+  +  + LS+CA
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH-EMQNSDVEPDNVSLANALSACA 259

Query: 230 NLDAEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCA 289
            L   G L +GK +H+Y+ +    +   +G  LID Y K G +  A  VF  +K + V A
Sbjct: 260 QL---GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 319

Query: 290 WNAMISSLASNSRETEALDLFAKM-KVESHPNEVTFVVILTACARGKLVELGLQLFRSMS 349
           W A+IS  A +    EA+  F +M K+   PN +TF  +LTAC+   LVE G  +F SM 
Sbjct: 320 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 379

Query: 350 NDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELG 409
            D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A + GALL AC+IH   ELG
Sbjct: 380 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 439

Query: 410 NEVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRV 463
            E+G  L+ I P H GRYV  A+I+A  +KW+ AA  RR+M +  + K P  S +
Sbjct: 440 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490

BLAST of Clc02G02130 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 292.7 bits (748), Expect = 5.2e-79
Identity = 166/429 (38.69%), Postives = 251/429 (58.51%), Query Frame = 0

Query: 35  LFNQSQTSSNQKCLTTLLYNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSII-K 94
           LF+  Q S       T LYN LI+AY   ++P  +++LY  +     +P+ HTF  I   
Sbjct: 38  LFDHHQNS------CTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 97

Query: 95  SATISSPPLAKLIHAHAVKIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAF 154
           SA+ SS    +L+H+   + G  +D F  T+ + +YA L  L  AR+VFDE++   +  +
Sbjct: 98  SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 157

Query: 155 NSMLDAFVKNGDLGSAVLMFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSV 214
           N+M+  + + GD+ +A+ +F SMP ++V SWT+V++GF  NG + EA+  F  M  + SV
Sbjct: 158 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 217

Query: 215 KPNEATFVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGS 274
           KPN  T VSVL +CANL   G L  G+ +  Y   N    +++V  A I+ Y K G++  
Sbjct: 218 KPNHITVVSVLPACANL---GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 277

Query: 275 ARIVFNQMKN-REVCAWNAMISSLASNSRETEALDLFAKMKVESH-PNEVTFVVILTACA 334
           A+ +F ++ N R +C+WN+MI SLA++ +  EAL LFA+M  E   P+ VTFV +L AC 
Sbjct: 278 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 337

Query: 335 RGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVL 394
            G +V  G +LF+SM     I P  EHY C++DLLG+ G L+EA + I++MP +PDA V 
Sbjct: 338 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 397

Query: 395 GALLSACKIHGATELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADA 454
           G LL AC  HG  E+       L  ++P + G  V +++I A  EKW+    +R++M   
Sbjct: 398 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 457

Query: 455 RIQKAPAYS 461
            + KA  YS
Sbjct: 458 TMTKAAGYS 457

BLAST of Clc02G02130 vs. TAIR 10
Match: AT5G08305.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-78
Identity = 162/415 (39.04%), Postives = 252/415 (60.72%), Query Frame = 0

Query: 53  YNTLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSAT-ISSPPLAKLIHAHAV 112
           +N +IR +     P  ++ +Y QML     P+  T+P ++KS++ +S+  L   +H   V
Sbjct: 76  WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135

Query: 113 KIGVLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVL 172
           K G+  D F+  + +  Y   R  ++ARK+FDE+    +V +NS+LDA+ K+GD+ SA L
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195

Query: 173 MFRSMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLD 232
           +F  M ERDVV+W+S+++G+   G + +A+  F+ MM  GS K NE T VSV+ +CA+L 
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL- 255

Query: 233 AEGVLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQ--MKNREVCAW 292
             G L RGK VH YI+     L+V + T+LID Y K G +G A  VF +  +K  +   W
Sbjct: 256 --GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 315

Query: 293 NAMISSLASNSRETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSN 352
           NA+I  LAS+    E+L LF KM+     P+E+TF+ +L AC+ G LV+     F+S+  
Sbjct: 316 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-K 375

Query: 353 DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGN 412
           +    P +EHY C+VD+L +AGL+++A +FI  MP +P  S+LGALL+ C  HG  EL  
Sbjct: 376 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 435

Query: 413 EVGRRLLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVD 464
            VG++L+ +QP + GRYV LA++ A  +++  A  +R  M    ++K   +S +D
Sbjct: 436 TVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILD 486

BLAST of Clc02G02130 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.2 bits (692), Expect = 1.6e-72
Identity = 161/470 (34.26%), Postives = 255/470 (54.26%), Query Frame = 0

Query: 14  RFLKNSIKIPQIHAFLLTDGH------LFNQSQTSSNQKCL-------------TTLLYN 73
           R  KN   +P IHA ++   H      +F   +  S    +                LY 
Sbjct: 37  RSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYT 96

Query: 74  TLIRAYLTFNRPRSALLLYTQMLSHQTKPNAHTFPSIIKSATISSPPLAKLIHAHAVKIG 133
            +I  +++  R    + LY +M+ +   P+ +   S++K+  +    + + IHA  +K+G
Sbjct: 97  AMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLK---VCREIHAQVLKLG 156

Query: 134 VLTDPFVLTSFLASYADLRQLSNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVLMFR 193
             +   V    +  Y    +L NA+K+FDE+ D   VA   M++ + + G +  A+ +F+
Sbjct: 157 FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQ 216

Query: 194 SMPERDVVSWTSVVNGFWWNGRFLEAIWFFEMMMMNGSVKPNEATFVSVLSSCANLDAEG 253
            +  +D V WT++++G   N    +A+  F  M M  +V  NE T V VLS+C++L   G
Sbjct: 217 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSACSDL---G 276

Query: 254 VLCRGKEVHAYIIRNEGELSVFVGTALIDFYGKMGLLGSARIVFNQMKNREVCAWNAMIS 313
            L  G+ VH+++     ELS FVG ALI+ Y + G +  AR VF  M++++V ++N MIS
Sbjct: 277 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 336

Query: 314 SLASNSRETEALDLFAKMKVES-HPNEVTFVVILTACARGKLVELGLQLFRSMSNDFSIV 373
            LA +    EA++ F  M      PN+VT V +L AC+ G L+++GL++F SM   F++ 
Sbjct: 337 GLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVE 396

Query: 374 PITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRR 433
           P  EHY C+VDLLG+ G L EA  FIE++P EPD  +LG LLSACKIHG  ELG ++ +R
Sbjct: 397 PQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKR 456

Query: 434 LLVIQPRHCGRYVTLASINAGAEKWNHAAVIRRVMADARIQKAPAYSRVD 464
           L   +    G YV L+++ A + KW  +  IR  M D+ I+K P  S ++
Sbjct: 457 LFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887445.11.0e-24692.54putative pentatricopeptide repeat-containing protein At1g10330 [Benincasa hispid... [more]
XP_008455452.11.2e-23989.26PREDICTED: putative pentatricopeptide repeat-containing protein At1g10330 [Cucum... [more]
XP_004144596.16.3e-23688.37putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis sativus][more]
KAG6589154.11.0e-23085.05putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_022930726.18.2e-22884.42putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moscha... [more]
Match NameE-valueIdentityDescription
Q9SY758.2e-12250.98Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis th... [more]
Q9FJY73.0e-7939.28Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9FNN77.3e-7838.69Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... [more]
P0C8Q73.6e-7739.04Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX... [more]
Q9FIF72.3e-7134.26Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS... [more]
Match NameE-valueIdentityDescription
A0A1S3C1305.9e-24089.26putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo O... [more]
A0A0A0K5I53.0e-23688.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1[more]
A0A6J1ERE54.0e-22884.42putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita mosc... [more]
A0A6J1JN929.8e-22784.00putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxi... [more]
A0A6J1C5N62.0e-21682.34putative pentatricopeptide repeat-containing protein At1g10330 OS=Momordica char... [more]
Match NameE-valueIdentityDescription
AT1G10330.15.8e-12350.98Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.12.1e-8039.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G08510.15.2e-7938.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G08305.12.6e-7839.04Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G59200.11.6e-7234.26Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 182..211
e-value: 7.3E-5
score: 22.8
coord: 259..284
e-value: 0.025
score: 14.8
coord: 358..382
e-value: 0.47
score: 10.8
coord: 151..180
e-value: 1.3E-5
score: 25.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 51..94
e-value: 1.0E-7
score: 32.0
coord: 286..332
e-value: 7.4E-9
score: 35.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 288..316
e-value: 7.1E-5
score: 20.7
coord: 53..85
e-value: 0.0014
score: 16.6
coord: 151..182
e-value: 3.8E-6
score: 24.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 9.678885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 49..83
score: 9.273317
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 233..346
e-value: 4.4E-18
score: 67.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 101..232
e-value: 4.8E-26
score: 93.2
coord: 9..100
e-value: 3.0E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 26..464
NoneNo IPR availablePANTHERPTHR47929:SF1SUBFAMILY NOT NAMEDcoord: 26..464

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G02130.1Clc02G02130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding