![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Clc02G01590 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTTATTTATTTATTTATTTATGATTATTTTTGTTTTGAAACAATAGGCTCTATTAAGTAAATCTATAAATAACTGTTAAAAACACCTCATAACCTATAAGCACTGGCTTCGTAACGAAAAGAAAAGGGAAAGAAACAGGGAAAAGTAATTTTGTTGTTGGAAGGAACTAATGCGACCGATAATGATAAAGATTAAGAAGGAAGATTAAATTAATTAAGTAGTACCGTTAGGGTTTGGTTGTAGAAGGAATCGTCGGTCAATTCTCCAACGCTTTCTTAACCAATTCCAGTTTGCAGTTCATTTTGCAATCTTCCATTCTCCCTTTGCAATTCGATTTCCCCTTCTTTATTTCCCATTTTCTTGTGTATTAAAATCTGTTTCCGATCGAATTTCAATTTCCATTTACAGGAGATCACACCGTAATTCCAAATTTTTCCAGTATGAGTCTTCAACCTACGCGATCGGACACCGAGTCTACTGTTGTTGACGGCGTGAATCCTAATGCCGCCGGTCAAATCCAACCGTCGTCGCCGGGTTCCTTTTTATCACCGCGTCATTCATTGGATTCCCAGCGGAGAATCGCAATCGCTGTTGATTTGAGCGATGAGAGCGCATACGCCGTCCGTTGGGCTGTTCAGAACTATCTCCGTCCCGGTGATTTGGTGTTTTTTCTTCACGTTCGACCTACTAGTGTTCTTTATGGAGCTGATTGGGGATCAGTTGACCTTCATCAAAGAAATAGCAGCAGCGACGAGGTCAGCGCTGAGGAATCGCAACGAAAGCTGGAAGATGATTTCGACAACTTCACGGCGACCAAGGCCAGTGACTTGGCTCAACCTTTAGTGGAGGCTAATATTCCTTTCAAGATTCACATAGTCAAAGACCACGACATGAAGGAAAGACTCTGTCTCGAAGTTGAACGATTAGGGCTTAGTGCTGTTATCATGGGGAGCAGAGGCTTTGGCGCCTCAAAGCGAATCACTAAGGGCCGACTTGGAAGTGTTAGCGACTACTGCGTTCACCATTGCGTGTGTCCGGTGGTGGTGGTTAGGTATCCGGATGATAAGGATGGTTCTCGTGGTGGAGATGCTGATCCCGAAGGCTCGGTGAAGAGTATTATTGGGGAGGAAGTGGAACTTGATCCGGTGCCTGAAGATGAGCAGGAGTATCATGATGCTGACGAGGAGGTCAAAGGTTCGAGTTTTTCTTGACATTATTTTCCTCAATCTTCATGGGTTTCATTTTGTGTTATGTTTGTGATCGGGTAAATATTTTGTGCTTCTGAATTTCTTGTTCCTTATGAAGCTTGTTGCCTCAGATTGGATCTTTCCATCTTTTCTGTTGGAAAATAGATTGTATCTATTGATTAGATTTCTGGGTGGTGAGGGTGATGTATTGCAGTCTTTTCAATTGCCATTTCCTAAGCGGGTCCTGTTCATAATTCTGGACTGCGATGGACTAGTTTGCTTGGATTTTAGAACATCAGATAGCATTTCCTTTAGAAATCTATTCCCCCCCCCCCCCCCCCCCCCCCCCCCGATCAAGGTGTTGTTCTAAGCAGAGTTGAGGGGGAAATCGGGTAAATTATAATATAGTTAATATTAGACTGCCATTTTTGGTCACTGTTTTGGAGACTTCTAGATGTAACTGGGACTAGTCAATTATGAATTTAAATTCAAATATAAAATATGGTTAGTTTGTTCATTTAACTTCCTAACAAGTGGAGATTGTTGTAATGGGTAGTTTGCAGTTCTTATAAATGTTCCACGGCTCTGTATAATAAGGTACTTTTATTGTCTTTCCTCTTGAGCAGATGGTTAAATGAAGTGAATGATGTTGTGGTCGGTAGTCTGCTCATGTAAGCTAAATTTCAATTGCATTTTACTGCTTGACATCTAAGCGATTATGTATATGTATAGGTTGCGACTCTAATTTCAGCAGATTTGAGTGCTGACGATGTTTTGCGTTTGATTGGATTATAGTCTGTTTCTTGTTTGGCAATAACCACTAGAAACTCTGACATGCTTGAACTTTTAATGCAGAAATTGTACACAGTGACAAAGGTAGAGAGGACTGCTGAGTGAATTGAGTTAACTTTGAAGAGTTTGGTGTTTGTACATGATGAAAAACATTTCATATCCTTTGTTGGAAGAACAAAAACCTTTATGGTTAGAGATTTCCATTTGTACATGGTGAAAAATATTTCATATCCTCTGTTTTGAAGAACAAAAAACTGTATGGTCAGACATTGGTTTCTGTTTGTGTGTTCTTCTTCTCACACTACTTTTCAAGTTTCCATATTAATATTACATACATGTTACATTCATCTTGTGTTTTTGTACCTACTTCTAAAGTTTTGAGTAATTCACTAAAATAAAGTTGTGCAATTTTAATTTATTGATTTACATGGAGATATATAAAGTAAATCTAT GGTTTTATTTATTTATTTATTTATGATTATTTTTGTTTTGAAACAATAGGCTCTATTAAGTAAATCTATAAATAACTGTTAAAAACACCTCATAACCTATAAGCACTGGCTTCGTAACGAAAAGAAAAGGGAAAGAAACAGGGAAAAGTAATTTTGTTGTTGGAAGGAACTAATGCGACCGATAATGATAAAGATTAAGAAGGAAGATTAAATTAATTAAGTAGTACCGTTAGGGTTTGGTTGTAGAAGGAATCGTCGGTCAATTCTCCAACGCTTTCTTAACCAATTCCAGTTTGCAGAGATCACACCGTAATTCCAAATTTTTCCAGTATGAGTCTTCAACCTACGCGATCGGACACCGAGTCTACTGTTGTTGACGGCGTGAATCCTAATGCCGCCGGTCAAATCCAACCGTCGTCGCCGGGTTCCTTTTTATCACCGCGTCATTCATTGGATTCCCAGCGGAGAATCGCAATCGCTGTTGATTTGAGCGATGAGAGCGCATACGCCGTCCGTTGGGCTGTTCAGAACTATCTCCGTCCCGGTGATTTGGTGTTTTTTCTTCACGTTCGACCTACTAGTGTTCTTTATGGAGCTGATTGGGGATCAGTTGACCTTCATCAAAGAAATAGCAGCAGCGACGAGGTCAGCGCTGAGGAATCGCAACGAAAGCTGGAAGATGATTTCGACAACTTCACGGCGACCAAGGCCAGTGACTTGGCTCAACCTTTAGTGGAGGCTAATATTCCTTTCAAGATTCACATAGTCAAAGACCACGACATGAAGGAAAGACTCTGTCTCGAAGTTGAACGATTAGGGCTTAGTGCTGTTATCATGGGGAGCAGAGGCTTTGGCGCCTCAAAGCGAATCACTAAGGGCCGACTTGGAAGTGTTAGCGACTACTGCGTTCACCATTGCGTGTGTCCGGTGGTGGTGGTTAGGTATCCGGATGATAAGGATGGTTCTCGTGGTGGAGATGCTGATCCCGAAGGCTCGGTGAAGAGTATTATTGGGGAGGAAGTGGAACTTGATCCGGTGCCTGAAGATGAGCAGGAGTATCATGATGCTGACGAGGAGGTCAAAGAAATTGTACACAGTGACAAAGGTAGAGAGGACTGCTGAGTGAATTGAGTTAACTTTGAAGAGTTTGGTGTTTGTACATGATGAAAAACATTTCATATCCTTTGTTGGAAGAACAAAAACCTTTATGGTTAGAGATTTCCATTTGTACATGGTGAAAAATATTTCATATCCTCTGTTTTGAAGAACAAAAAACTGTATGGTCAGACATTGGTTTCTGTTTGTGTGTTCTTCTTCTCACACTACTTTTCAAGTTTCCATATTAATATTACATACATGTTACATTCATCTTGTGTTTTTGTACCTACTTCTAAAGTTTTGAGTAATTCACTAAAATAAAGTTGTGCAATTTTAATTTATTGATTTACATGGAGATATATAAAGTAAATCTAT ATGAGTCTTCAACCTACGCGATCGGACACCGAGTCTACTGTTGTTGACGGCGTGAATCCTAATGCCGCCGGTCAAATCCAACCGTCGTCGCCGGGTTCCTTTTTATCACCGCGTCATTCATTGGATTCCCAGCGGAGAATCGCAATCGCTGTTGATTTGAGCGATGAGAGCGCATACGCCGTCCGTTGGGCTGTTCAGAACTATCTCCGTCCCGGTGATTTGGTGTTTTTTCTTCACGTTCGACCTACTAGTGTTCTTTATGGAGCTGATTGGGGATCAGTTGACCTTCATCAAAGAAATAGCAGCAGCGACGAGGTCAGCGCTGAGGAATCGCAACGAAAGCTGGAAGATGATTTCGACAACTTCACGGCGACCAAGGCCAGTGACTTGGCTCAACCTTTAGTGGAGGCTAATATTCCTTTCAAGATTCACATAGTCAAAGACCACGACATGAAGGAAAGACTCTGTCTCGAAGTTGAACGATTAGGGCTTAGTGCTGTTATCATGGGGAGCAGAGGCTTTGGCGCCTCAAAGCGAATCACTAAGGGCCGACTTGGAAGTGTTAGCGACTACTGCGTTCACCATTGCGTGTGTCCGGTGGTGGTGGTTAGGTATCCGGATGATAAGGATGGTTCTCGTGGTGGAGATGCTGATCCCGAAGGCTCGGTGAAGAGTATTATTGGGGAGGAAGTGGAACTTGATCCGGTGCCTGAAGATGAGCAGGAGTATCATGATGCTGACGAGGAGGTCAAAGAAATTGTACACAGTGACAAAGGTAGAGAGGACTGCTGA MSLQPTRSDTESTVVDGVNPNAAGQIQPSSPGSFLSPRHSLDSQRRIAIAVDLSDESAYAVRWAVQNYLRPGDLVFFLHVRPTSVLYGADWGSVDLHQRNSSSDEVSAEESQRKLEDDFDNFTATKASDLAQPLVEANIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGASKRITKGRLGSVSDYCVHHCVCPVVVVRYPDDKDGSRGGDADPEGSVKSIIGEEVELDPVPEDEQEYHDADEEVKEIVHSDKGREDC Homology
BLAST of Clc02G01590 vs. NCBI nr
Match: XP_038887403.1 (universal stress protein PHOS32-like isoform X1 [Benincasa hispida]) HSP 1 Score: 498.0 bits (1281), Expect = 4.8e-137 Identity = 250/263 (95.06%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of Clc02G01590 vs. NCBI nr
Match: XP_038887404.1 (universal stress protein PHOS34-like isoform X2 [Benincasa hispida]) HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131 Identity = 239/252 (94.84%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of Clc02G01590 vs. NCBI nr
Match: XP_008455370.1 (PREDICTED: uncharacterized protein LOC103495556 isoform X1 [Cucumis melo]) HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130 Identity = 239/258 (92.64%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Clc02G01590 vs. NCBI nr
Match: XP_004144481.1 (universal stress protein PHOS32 isoform X1 [Cucumis sativus] >KGN43566.1 hypothetical protein Csa_020470 [Cucumis sativus]) HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128 Identity = 236/258 (91.47%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of Clc02G01590 vs. NCBI nr
Match: XP_008455371.1 (PREDICTED: uncharacterized protein LOC103495556 isoform X2 [Cucumis melo]) HSP 1 Score: 469.5 bits (1207), Expect = 1.8e-128 Identity = 235/252 (93.25%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.3e-62 Identity = 120/198 (60.61%), Postives = 151/198 (76.26%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.0e-61 Identity = 125/223 (56.05%), Postives = 152/223 (68.16%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05 Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy TrEMBL
Match: A0A1S3C0B5 (uncharacterized protein LOC103495556 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495556 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 5.6e-131 Identity = 239/258 (92.64%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy TrEMBL
Match: A0A0A0K6Y1 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G045550 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.8e-129 Identity = 236/258 (91.47%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy TrEMBL
Match: A0A1S3C0W6 (uncharacterized protein LOC103495556 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495556 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 8.9e-129 Identity = 235/252 (93.25%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy TrEMBL
Match: A0A1S3C0R7 (uncharacterized protein LOC103495556 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495556 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.0e-128 Identity = 234/252 (92.86%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Clc02G01590 vs. ExPASy TrEMBL
Match: A0A5D3C9T1 (Universal stress protein PHOS34 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003840 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.8e-128 Identity = 233/251 (92.83%), Postives = 243/251 (96.81%), Query Frame = 0
BLAST of Clc02G01590 vs. TAIR 10
Match: AT1G11360.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 278.1 bits (710), Expect = 7.3e-75 Identity = 153/232 (65.95%), Postives = 176/232 (75.86%), Query Frame = 0
BLAST of Clc02G01590 vs. TAIR 10
Match: AT1G11360.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 278.1 bits (710), Expect = 7.3e-75 Identity = 153/232 (65.95%), Postives = 176/232 (75.86%), Query Frame = 0
BLAST of Clc02G01590 vs. TAIR 10
Match: AT1G11360.3 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 278.1 bits (710), Expect = 7.3e-75 Identity = 153/232 (65.95%), Postives = 176/232 (75.86%), Query Frame = 0
BLAST of Clc02G01590 vs. TAIR 10
Match: AT1G11360.4 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 278.1 bits (710), Expect = 7.3e-75 Identity = 153/232 (65.95%), Postives = 176/232 (75.86%), Query Frame = 0
BLAST of Clc02G01590 vs. TAIR 10
Match: AT5G54430.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 239.2 bits (609), Expect = 3.8e-63 Identity = 120/198 (60.61%), Postives = 151/198 (76.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|