Clc02G00680 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G00680
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	VQ domain-containing protein
Location	ClcChr02: 618201 .. 619493 (+)
RNA-Seq Expression	Clc02G00680
Synteny	Clc02G00680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTCCCCCAACCAACTCTCCTCCAATTGTTACAAACAAAACAACCCCAAAATTAACCCAATTTCCCAATTCTCCACCTTTTCCCCGATCCGATTCCGATTCTCCTCCGCCAGATCCGCCATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACCACCCCAAGAAAGAAGGAGATCCAGCTACAAGGCCCCCGCCCGCCGCAACTCCGCGTCAGTCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGGTTCCCCCCGGCGGCCGGCCTCCTCTCCCGCCGGGCCCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTCGCCGAGAACAACTTCATGTCCGTCGTCCAGCGCCTCACTGGGCTGTCCTCCGCCGCCGCCACCGACGGCGACCTGTCCCCGGCAGCAAGGCTGGCCACAATCGAGAAAGCCAGTCCCCGATCCGAAAGAGAAAGAGAAAGAGAAAGAGAAATCAACGTTAGCGACATGATGGATTTGGCGGAGGTTCCGGTGGAATTAGGGCAAATTCCCGGAATCCTGTCACCAGCTCCGGCAACTCTGGCTCCGATTCCGACAGGGTATTTCTCGCCGGCGATTGAACATCAGAGCTTGGCGTATTCTTTGATTCACGAGCTGAGTCCTCATTGGCCAAGCCCTTCTGCTCTGTTTTCAGCTCCTCTTGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTTTAGCTAAGTTCTCTCTCTTCTTTCTCTCTAAAATATTAATCTTCATTGCCAATGCTCTTCACCAAAGAGGAATTTTGGGTTTTTTCTTTTCTTTTGTAAAGTAGGTTCTTGTAATTTGTATAACATTTTTCCTTATTGTTCAATTCATTAACTACCCTAAAAACTCTAGTTTTAGTTTCCTTTTCCCATTAATTACCTCATTATATTTGTAAATGTGGCATTTTTCATCTCATATATCTAATTTATCTATCCTAAAAAAATAAAAATAATAAATCCATTTTTCATTTTTCTTCTTTTATACTAATTAGGCGATGGGATCCAAGGTTGACTGCTTGTTAATTGCAACCATATGAATTAGATTTTATTTATTTAATTTTTTTTTCTTGTCTAAAATTTTGGTCTTTTCTGTGTGTAGAATTGTTGACTTTTCCACATGTATTCGCTTTATCGTTATCATTTAATTTGTTTTATGATATCATTATTTCCATATTATGCCCAAATATAACGCTAACGTAATTTCCT

mRNA sequence

TTTAATTCCCCCAACCAACTCTCCTCCAATTGTTACAAACAAAACAACCCCAAAATTAACCCAATTTCCCAATTCTCCACCTTTTCCCCGATCCGATTCCGATTCTCCTCCGCCAGATCCGCCATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACCACCCCAAGAAAGAAGGAGATCCAGCTACAAGGCCCCCGCCCGCCGCAACTCCGCGTCAGTCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGGTTCCCCCCGGCGGCCGGCCTCCTCTCCCGCCGGGCCCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTCGCCGAGAACAACTTCATGTCCGTCGTCCAGCGCCTCACTGGGCTGTCCTCCGCCGCCGCCACCGACGGCGACCTGTCCCCGGCAGCAAGGCTGGCCACAATCGAGAAAGCCAGTCCCCGATCCGAAAGAGAAAGAGAAAGAGAAAGAGAAATCAACGTTAGCGACATGATGGATTTGGCGGAGGTTCCGGTGGAATTAGGGCAAATTCCCGGAATCCTGTCACCAGCTCCGGCAACTCTGGCTCCGATTCCGACAGGGTATTTCTCGCCGGCGATTGAACATCAGAGCTTGGCGTATTCTTTGATTCACGAGCTGAGTCCTCATTGGCCAAGCCCTTCTGCTCTGTTTTCAGCTCCTCTTGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTTTAGCTAAGTTCTCTCTCTTCTTTCTCTCTAAAATATTAATCTTCATTGCCAATGCTCTTCACCAAAGAGGAATTTTGGGTTTTTTCTTTTCTTTTGTAAAGTAGGTTCTTGTAATTTGTATAACATTTTTCCTTATTGTTCAATTCATTAACTACCCTAAAAACTCTAGTTTTAGTTTCCTTTTCCCATTAATTACCTCATTATATTTGTAAATGTGGCATTTTTCATCTCATATATCTAATTTATCTATCCTAAAAAAATAAAAATAATAAATCCATTTTTCATTTTTCTTCTTTTATACTAATTAGGCGATGGGATCCAAGGTTGACTGCTTGTTAATTGCAACCATATGAATTAGATTTTATTTATTTAATTTTTTTTTCTTGTCTAAAATTTTGGTCTTTTCTGTGTGTAGAATTGTTGACTTTTCCACATGTATTCGCTTTATCGTTATCATTTAATTTGTTTTATGATATCATTATTTCCATATTATGCCCAAATATAACGCTAACGTAATTTCCT

Coding sequence (CDS)

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACCACCCCAAGAAAGAAGGAGATCCAGCTACAAGGCCCCCGCCCGCCGCAACTCCGCGTCAGTCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGGTTCCCCCCGGCGGCCGGCCTCCTCTCCCGCCGGGCCCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTCGCCGAGAACAACTTCATGTCCGTCGTCCAGCGCCTCACTGGGCTGTCCTCCGCCGCCGCCACCGACGGCGACCTGTCCCCGGCAGCAAGGCTGGCCACAATCGAGAAAGCCAGTCCCCGATCCGAAAGAGAAAGAGAAAGAGAAAGAGAAATCAACGTTAGCGACATGATGGATTTGGCGGAGGTTCCGGTGGAATTAGGGCAAATTCCCGGAATCCTGTCACCAGCTCCGGCAACTCTGGCTCCGATTCCGACAGGGTATTTCTCGCCGGCGATTGAACATCAGAGCTTGGCGTATTCTTTGATTCACGAGCTGAGTCCTCATTGGCCAAGCCCTTCTGCTCTGTTTTCAGCTCCTCTTGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTTTAG

Protein sequence

MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF

Homology

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BLAST of Clc02G00680 vs. NCBI nr
Match: XP_038901805.1 (protein MKS1-like [Benincasa hispida])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 210/219 (95.89%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPVPPGGRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPVPPGGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS---AAATDGDLSPAARLATIEKA 120
           PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS   AAATDGDLSPAARLATIEKA
Sbjct: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSSAAAATDGDLSPAARLATIEKA 120

Query: 121 SPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSL 180
           SPRS    EREREINVSDMMDLAEV VELGQIPGILSPAPATLAPIPTGYFSPAIEHQSL
Sbjct: 121 SPRS----EREREINVSDMMDLAEVSVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSL 180

Query: 181 AYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           AYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF
Sbjct: 181 AYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 215

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BLAST of Clc02G00680 vs. NCBI nr
Match: XP_008460908.1 (PREDICTED: protein MKS1-like [Cucumis melo] >KAA0040772.1 protein MKS1-like [Cucumis melo var. makuwa] >TYK02088.1 protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 380.6 bits (976), Expect = 9.2e-102
Identity = 199/216 (92.13%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           L HELSPHWPSPSALFS PL+SPISSPNIFNNLFDF
Sbjct: 181 LFHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

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BLAST of Clc02G00680 vs. NCBI nr
Match: XP_011649396.1 (protein MKS1 [Cucumis sativus] >KGN62143.1 hypothetical protein Csa_006357 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 196/215 (91.16%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP  GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFD 216
           L HELSPHW SPSALFS PL+SPISSPNIFNNLFD
Sbjct: 181 LFHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of Clc02G00680 vs. NCBI nr
Match: KAG6605314.1 (Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035269.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.0 bits (920), Expect = 2.9e-95
Identity = 190/217 (87.56%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAA-ATDGDLSPAARLATIEKASP 120
            +QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSSAA +TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAY 180
           RS  EREREREI+VSDMMDL EVPVELGQ PGILSPAPA+LAPI +G+FSPAIE QS  Y
Sbjct: 121 RS--EREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTY 180

Query: 181 SLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           SLIHELSPHWPSPSALF APLVSPISSPNIFN+LFDF
Sbjct: 181 SLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215

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BLAST of Clc02G00680 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 5.4e-94
Identity = 188/217 (86.64%), Postives = 198/217 (91.24%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAA-ATDGDLSPAARLATIEKASP 120
            +QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSSAA +TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAY 180
           RS    EREREI+VSDMMDL EVPVELGQ PGILSPAPA+LAPI +G+FSPAIE QS  Y
Sbjct: 121 RS----EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTY 180

Query: 181 SLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           SLIHELSPHWPSPSALF APLVSPISSPNIFN+LFDF
Sbjct: 181 SLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Clc02G00680 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-27
Identity = 97/218 (44.50%), Postives = 128/218 (58.72%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLP 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPP-- 60

Query: 61  PGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD----GDLSPAARLATI 120
             P    +P++IY +SPKV+H   + FM+VVQRLTG+SS    +    GD+SPAARLA+ 
Sbjct: 61  --PYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           E ASPR  +E   R+   EIN + M + AE     G  PGILSP+PA L    TG FSP 
Sbjct: 121 ENASPRGGKEPAARDETVEINTA-MEEAAEFG---GYAPGILSPSPALLPTASTGIFSP- 180

Query: 181 IEHQSLAYSLIHELSPHWPS-PSALFS-APLVSPISSP 208
           + HQ   +S         P+ P  LFS A  +SP  SP
Sbjct: 181 MYHQGGMFS---------PAIPLGLFSPAGFMSPFRSP 200

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BLAST of Clc02G00680 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 50/124 (40.32%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PPHPQP PP      P      P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGLSSAAATD---------------------GDLSPAARLATIEKAS 123
              NNFM++VQRLTG +S + T                      G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

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BLAST of Clc02G00680 vs. ExPASy TrEMBL
Match: A0A5A7TBE4 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00750 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.5e-102
Identity = 199/216 (92.13%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           L HELSPHWPSPSALFS PL+SPISSPNIFNNLFDF
Sbjct: 181 LFHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

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BLAST of Clc02G00680 vs. ExPASy TrEMBL
Match: A0A1S3CD17 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.5e-102
Identity = 199/216 (92.13%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           L HELSPHWPSPSALFS PL+SPISSPNIFNNLFDF
Sbjct: 181 LFHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

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BLAST of Clc02G00680 vs. ExPASy TrEMBL
Match: A0A0A0LK21 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 196/215 (91.16%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP  GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFD 216
           L HELSPHW SPSALFS PL+SPISSPNIFNNLFD
Sbjct: 181 LFHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of Clc02G00680 vs. ExPASy TrEMBL
Match: A0A6J1G715 (protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 188/217 (86.64%), Postives = 198/217 (91.24%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAA-ATDGDLSPAARLATIEKASP 120
            +QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSSAA +TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAY 180
           RS    EREREI+VSDMMDL EVPVELGQ PGILSPAPA+LAPI +G+FSPAIE QS  Y
Sbjct: 121 RS----EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTY 180

Query: 181 SLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           SLIHELSPHWPSPSALF APLVSPISSPNIFN+LFDF
Sbjct: 181 SLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Clc02G00680 vs. ExPASy TrEMBL
Match: A0A6J1L2G0 (protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.2e-92
Identity = 183/217 (84.33%), Postives = 195/217 (89.86%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+PP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAAT-DGDLSPAARLATIEKASP 120
            +QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSSA+++ DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAY 180
           RS      EREI+VSDMMDL EVPVELGQ PGILSPAPA+LAPI +G+FSP IE QS  Y
Sbjct: 121 RS------EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTY 180

Query: 181 SLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           SLIHELSPHWPSPSALF APLVSPISSPNIFN+LFDF
Sbjct: 181 SLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 211

[Close]

BLAST of Clc02G00680 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-28
Identity = 97/218 (44.50%), Postives = 128/218 (58.72%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLP 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPP-- 60

Query: 61  PGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD----GDLSPAARLATI 120
             P    +P++IY +SPKV+H   + FM+VVQRLTG+SS    +    GD+SPAARLA+ 
Sbjct: 61  --PYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           E ASPR  +E   R+   EIN + M + AE     G  PGILSP+PA L    TG FSP 
Sbjct: 121 ENASPRGGKEPAARDETVEINTA-MEEAAEFG---GYAPGILSPSPALLPTASTGIFSP- 180

Query: 181 IEHQSLAYSLIHELSPHWPS-PSALFS-APLVSPISSP 208
           + HQ   +S         P+ P  LFS A  +SP  SP
Sbjct: 181 MYHQGGMFS---------PAIPLGLFSPAGFMSPFRSP 200

[Close]

BLAST of Clc02G00680 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-11
Identity = 80/250 (32.00%), Postives = 108/250 (43.20%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVSQESRK-IKKP---PPHPQPVPPGGRPPLPPGPAQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PPHPQP PP      P      P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVI 64

Query: 74  IYDISPKVIHVAENNFMSVVQRLTGLSSAAATD---------------------GDLSPA 133
           IY +SP++IH   NNFM++VQRLTG +S + T                      G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKDASTMVDTSHGLISPA 124

Query: 134 ARLATIEKASPRSE---------------------REREREREINVSDMMDLAEVPVELG 193
           AR A  EKA+  +E                       +E++ +    +            
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMDQYYHYHHHHHHQEQQHQNQGFERPSFHHA----- 184

Query: 194 QIPGILSPAPATLAPIPTGYFSPAIEHQSLAYSLIHELSPHWPSPSALFSAP--LVSPIS 216
              GILSP P +L  +   +FS         +S            S L S+P  + SP S
Sbjct: 185 ---GILSPGPNSLPSVSPDFFSTIGPTDPQGFSSFFN-----DFNSILQSSPSKIQSP-S 238

[Close]

BLAST of Clc02G00680 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 50/124 (40.32%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PPHPQP PP      P      P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGLSSAAATD---------------------GDLSPAARLATIEKAS 123
              NNFM++VQRLTG +S + T                      G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

[Close]

BLAST of Clc02G00680 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.3e-04
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 25  PRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHVAENN 84
           P PP L+V+++S  IKK PP P       +P           P+IIY  +P++IH    +
Sbjct: 41  PSPPTLKVNKDSHVIKK-PPSPSSFSSAAKP---------RHPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGLS 97
           FM++VQ+LTG++
Sbjct: 101 FMALVQKLTGMT 102

The following BLAST results are available for this feature:

BLAST of Clc02G00680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901805.1	3.6e-106	95.89	protein MKS1-like [Benincasa hispida]	[more]
XP_008460908.1	9.2e-102	92.13	PREDICTED: protein MKS1-like [Cucumis melo] >KAA0040772.1 protein MKS1-like [Cuc...	[more]
XP_011649396.1	2.5e-99	91.16	protein MKS1 [Cucumis sativus] >KGN62143.1 hypothetical protein Csa_006357 [Cucu...	[more]
KAG6605314.1	2.9e-95	87.56	Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035269.1 Prot...	[more]
XP_022947651.1	5.4e-94	86.64	protein MKS1-like [Cucurbita moschata]	[more]

BLAST of Clc02G00680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD5	7.8e-27	44.50	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
F4HWF9	1.9e-09	40.32	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of Clc02G00680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBE4	4.5e-102	92.13	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00...	[more]
A0A1S3CD17	4.5e-102	92.13	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
A0A0A0LK21	1.2e-99	91.16	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=...	[more]
A0A6J1G715	2.6e-94	86.64	protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1	[more]
A0A6J1L2G0	4.2e-92	84.33	protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1	[more]

BLAST of Clc02G00680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18690.1	5.5e-28	44.50	MAP kinase substrate 1	[more]
AT1G21326.1	3.6e-11	32.00	VQ motif-containing protein	[more]
AT1G21320.1	1.4e-10	40.32	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	3.3e-04	37.50	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 1.8E-10 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..63
None	No IPR available	PANTHER	PTHR33143:SF50	PROTEIN MKS1	coord: 9..215
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 9..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G00680.1	Clc02G00680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus