Clc01G26500 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G26500
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transmembrane protein
Location	ClcChr01: 36550053 .. 36551758 (+)
RNA-Seq Expression	Clc01G26500
Synteny	Clc01G26500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCCCTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGCTTCCCTCTAACTGGAGACTTGTTTTTGGTATTTTTGAAAGTGTTATTGCTACTAACTGCTGCAGTACTCCAGTTCGCTCAGAATTTAATAGAAGCAAACGACTTCATCACCTCCTGTTAACACAATCATTTATATGAAAAAAGGAGAACTTGTAACGCTGTAATTTGATATCCTTTTAAATCACTACTAACTACGATCAAAAGAATGCATTAATGGCTCTTGCAGACTGGATTGTGAATAGAATGAACTTTTTTGTTTTTTTGGAAACATTTGTCAACTTCTTGGAAAACTGTGGCCTATTTGGCAACCATTTGTTTGATGGCAGTCTCTAGTCGTTCCTTTATCTTGTATTGCATATTTGTTCATATCTAGAATTAAGAGAGTGATATGTTAATTGCCAATCAAATTATATTAATATTTTAATACATTCTTACCTTTTAGGAGGCTCAACAAGTGAAAATCAATATTAATTAGAGAGAAAAGAACATTACATTGTTTGAACATAAAACCTTCTATTTTGATGTCATGTTAAATCTCCAATTAACTTCAACAGCGGTTATAAAAAAGAAAGAAAATCTTGACAAGTTATGGTAAATTTAATTATATCAATAAACATGATTAAAAAATCAATTTAATGCAGTAATGCGGTAGAGGTGATTGTATGTAATTAATTTATTTCTTCAGCAATGTATGATAAAGTTTGGTGCTGCGGATACTAATTCTAATCGAAGCGGTTTGTATGTTTATTGGAACGACTTCGAAATCTGCAGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCTTGGATTTTTCGCATTTACTGGCATTCCTACTGCTGTAAGTTCCTCTGTCCCCAAGTTTTGACATTTGTGAAGGGATTATTACATCTCTTCGTATGCGTTTATCATAGCATGAAATTATAACATTAACCTTTTGCGTCTCTCTAATGAACGATCATAAATAGGAAGTATCCATCTTTCTGTGTTTTTTGTTGAGGGGAGCGGAAAATTGAATATAAAAATTTAAAAATCAAACATGGTGTCCTCTTCTCTGAGTTGCATCAATTCTTAGCTAGAAACGTTGCACACAAGGTACCGTATACTGTGTCAACTGCAAAGGGAGTAATAAGAAGAATGACAATACCATTGCAAAAACACGAACTCCCGCTTACAAGGCTCTCTATCTAATTTCTCGAGACAGGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAGAGTATTTTTCTCTAACACGAATTTGTTGTCCTTTGAATACTCTTCCCC

mRNA sequence

ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCCCTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGCTTCCCTCTAACTGGAGACTTGTTTTTGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCTTGGATTTTTCGCATTTACTGGCATTCCTACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAGAGTATTTTTCTCTAACACGAATTTGTTGTCCTTTGAATACTCTTCCCC

Coding sequence (CDS)

ATGTCTGCGACGCTGTTGTCTTATTGCAATCCAAGTCTAGCTTGTAATTACGGGAGGGTGGATTTGAAACGCATGGCTTTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACTGTGTTTTCCGTTACAGAAGGATCTGCAAAATCGAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAACCTGATTCGGAGGAGCCCCCTCCTTGGACAAGGGAAGAAGGCAAGGAAAGTGGAAACAATCAGGGCTTTCAGGTCCCTTTCTATATTTACTTGCTCGCCTCATCTATCACTGCAATTGCAGCTGTAAGCTTCCCTCTAACTGGAGACTTGTTTTTGATAGGTTCCATATTCGAGTACGTCAACCAGAAGCCTGTCTTTGGACTTATAAATTCAGACAGCATATTGTACGCTCCAGTGCTTGGATTTTTCGCATTTACTGGCATTCCTACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAG

Protein sequence

MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

Homology

[Close]

BLAST of Clc01G26500 vs. NCBI nr
Match: XP_038881100.1 (uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 159/183 (86.89%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSLACNYGR+D K MAFGHLRSIG RNNGYRKLTVF+VTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPSLACNYGRMDSKHMAFGHLRSIGSRNNGYRKLTVFAVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAKPDSEEPPPW REEGKE G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKPDSEEPPPWAREEGKEIGTQQGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSILYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. NCBI nr
Match: XP_004153846.1 (uncharacterized protein LOC101218426 isoform X2 [Cucumis sativus] >XP_031743761.1 uncharacterized protein LOC116401609 isoform X2 [Cucumis sativus] >KGN49525.1 hypothetical protein Csa_003345 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 7.6e-81
Identity = 156/183 (85.25%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSL CNYGR+DLKRMA GHLRS GRRNNGYRKLTVF+VTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPSLVCNYGRMDLKRMALGHLRSFGRRNNGYRKLTVFAVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAK DSEEPPPW +EEGKE G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKLDSEEPPPWAKEEGKEIGTQQGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFA TGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSILYAPLLGFFALTGIPTAAFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. NCBI nr
Match: XP_016899276.1 (PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 156/183 (85.25%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEE
Sbjct: 34  MSATLLSYCNPSLACNYARMDLKRMALGHLRSIGRRNNGHRKLTVFAVTEGSAKSSESEE 93

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 94  TIPSWAKLDSEEPPPWAKEERKETGTQQGFQVPFYVYLLASSITAIAA-----------I 153

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 154 GSVFEYVNQKPVFGIINSDSILYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 205

Query: 181 GYL 184
           GYL
Sbjct: 214 GYL 205

[Close]

BLAST of Clc01G26500 vs. NCBI nr
Match: KAA0052430.1 (uncharacterized protein E6C27_scaffold120G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 156/183 (85.25%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPSLACNYARMDLKRMALGHLRSIGRRNNGHRKLTVFAVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKLDSEEPPPWAKEERKETGTQQGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSILYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. NCBI nr
Match: XP_023518065.1 (uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo] >XP_023518066.1 uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo] >XP_023518067.1 uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 153/183 (83.61%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNP LACNYGR++ +R AFGHLR IGRR+NGYRKLTVFSVTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPRLACNYGRMNTERTAFGHLRPIGRRSNGYRKLTVFSVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAKPDSEEPPPW REEGKE+G+  GFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKPDSEEPPPWAREEGKETGSQLGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSI YAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. ExPASy TrEMBL
Match: A0A0A0KIJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G527080 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.7e-81
Identity = 156/183 (85.25%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSL CNYGR+DLKRMA GHLRS GRRNNGYRKLTVF+VTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPSLVCNYGRMDLKRMALGHLRSFGRRNNGYRKLTVFAVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAK DSEEPPPW +EEGKE G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKLDSEEPPPWAKEEGKEIGTQQGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFA TGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSILYAPLLGFFALTGIPTAAFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. ExPASy TrEMBL
Match: A0A5A7UB84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00260 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.3e-81
Identity = 156/183 (85.25%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPSLACNYARMDLKRMALGHLRSIGRRNNGHRKLTVFAVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKLDSEEPPPWAKEERKETGTQQGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSILYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. ExPASy TrEMBL
Match: A0A1S4DTF9 (uncharacterized protein LOC103484254 OS=Cucumis melo OX=3656 GN=LOC103484254 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.3e-81
Identity = 156/183 (85.25%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNPSLACNY R+DLKRMA GHLRSIGRRNNG+RKLTVF+VTEGSAKSSESEE
Sbjct: 34  MSATLLSYCNPSLACNYARMDLKRMALGHLRSIGRRNNGHRKLTVFAVTEGSAKSSESEE 93

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAK DSEEPPPW +EE KE+G  QGFQVPFY+YLLASSITAIAA           I
Sbjct: 94  TIPSWAKLDSEEPPPWAKEERKETGTQQGFQVPFYVYLLASSITAIAA-----------I 153

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSILYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 154 GSVFEYVNQKPVFGIINSDSILYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 205

Query: 181 GYL 184
           GYL
Sbjct: 214 GYL 205

[Close]

BLAST of Clc01G26500 vs. ExPASy TrEMBL
Match: A0A6J1EDF6 (uncharacterized protein LOC111433301 OS=Cucurbita moschata OX=3662 GN=LOC111433301 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.7e-79
Identity = 152/182 (83.52%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSY NPSLACNYG++D KR+AFG LRSIGRRNNG+R LTVF+ TEGSAKSSESEE
Sbjct: 1   MSATLLSYYNPSLACNYGKMDAKRIAFGQLRSIGRRNNGHRNLTVFAATEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAKPDSEEPPPW REEGKE G +QGFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKPDSEEPPPWAREEGKEIGTHQGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSI YAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 171

Query: 181 GY 183
           GY
Sbjct: 181 GY 171

[Close]

BLAST of Clc01G26500 vs. ExPASy TrEMBL
Match: A0A6J1KQE7 (uncharacterized protein LOC111497315 OS=Cucurbita maxima OX=3661 GN=LOC111497315 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-78
Identity = 152/183 (83.06%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MSATLLSYCNPSLACNYGRVDLKRMAFGHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEE 60
           MSATLLSYCNP LACNYGR++ +R AFGHLR IGRR NGYRKLTVFSVTEGSAKSSESEE
Sbjct: 1   MSATLLSYCNPRLACNYGRMNTERTAFGHLRPIGRRINGYRKLTVFSVTEGSAKSSESEE 60

Query: 61  TIPSWAKPDSEEPPPWTREEGKESGNNQGFQVPFYIYLLASSITAIAAVSFPLTGDLFLI 120
           TIPSWAKPDSEEPPPW REE KE+G+  GFQVPFY+YLLASSITAIAA           I
Sbjct: 61  TIPSWAKPDSEEPPPWAREEVKETGSQLGFQVPFYVYLLASSITAIAA-----------I 120

Query: 121 GSIFEYVNQKPVFGLINSDSILYAPVLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRD 180
           GS+FEYVNQKPVFG+INSDSI YAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRD
Sbjct: 121 GSVFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTAGFLWFKSVEVANKEAEDQDRRD 172

Query: 181 GYL 184
           GYL
Sbjct: 181 GYL 172

[Close]

BLAST of Clc01G26500 vs. TAIR 10
Match: AT3G51510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 181.0 bits (458), Expect = 8.5e-46
Identity = 93/156 (59.62%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 28  GHLRSIGRRNNGYRKLTVFSVTEGSAKSSESEETIPSWAKPDSEEPPPWTREEGKESGNN 87
           GHL    R  +  R+L V + TEGS KS ESE   PSWA PDS+EPPPW R EG+ S + 
Sbjct: 42  GHLLHYER--STVRRLVVTAATEGSKKSKESE---PSWANPDSDEPPPWARNEGRSSTSQ 101

Query: 88  QGFQVPFYIYLLASSITAIAAVSFPLTGDLFLIGSIFEYVNQKPVFGLINSDSILYAPVL 147
           + F+VPF++YLLAS+ITAIAA           IGS+FEY ++ PVFG++ SDSI Y PVL
Sbjct: 102 ESFEVPFFVYLLASAITAIAA-----------IGSVFEYTSKNPVFGILESDSIFYTPVL 161

Query: 148 GFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL 184
           GFFA TGIPT+ FLWFKSVE ANKEA++QD+RDG+L
Sbjct: 162 GFFALTGIPTSVFLWFKSVEAANKEAQEQDKRDGFL 181

The following BLAST results are available for this feature:

BLAST of Clc01G26500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881100.1	1.1e-82	86.89	uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida]	[more]
XP_004153846.1	7.6e-81	85.25	uncharacterized protein LOC101218426 isoform X2 [Cucumis sativus] >XP_031743761....	[more]
XP_016899276.1	1.3e-80	85.25	PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo]	[more]
KAA0052430.1	1.3e-80	85.25	uncharacterized protein E6C27_scaffold120G00260 [Cucumis melo var. makuwa]	[more]
XP_023518065.1	1.1e-79	83.61	uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo] >XP_023518066....	[more]

BLAST of Clc01G26500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G26500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIJ8	3.7e-81	85.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G527080 PE=4 SV=1	[more]
A0A5A7UB84	6.3e-81	85.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4DTF9	6.3e-81	85.25	uncharacterized protein LOC103484254 OS=Cucumis melo OX=3656 GN=LOC103484254 PE=...	[more]
A0A6J1EDF6	7.7e-79	83.52	uncharacterized protein LOC111433301 OS=Cucurbita moschata OX=3662 GN=LOC1114333...	[more]
A0A6J1KQE7	1.7e-78	83.06	uncharacterized protein LOC111497315 OS=Cucurbita maxima OX=3661 GN=LOC111497315...	[more]

BLAST of Clc01G26500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51510.1	8.5e-46	59.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..85
None	No IPR available	PANTHER	PTHR36042	OS05G0490900 PROTEIN	coord: 25..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G26500.2	Clc01G26500.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane