Clc01G26300 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G26300
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	polygalacturonase QRT3-like
Location	ClcChr01: 36386846 .. 36390492 (+)
RNA-Seq Expression	Clc01G26300
Synteny	Clc01G26300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACACAACCATTATCTCTCTTTTTCATATTATGCCTTCAAAACATCCTCCTCGTCTTCCCCTTTCTTTCTTCTGCAACACCCACTTTACATTCCCTTTCTTCTCCGGCGCCGCCCACCCATTTTTCCGGCGGAAGCCCCCATTACCACCGCCATTTCTCTAATTTACGCAAACTCAAATCCTCACTAACGGTTCGACACGACGCCGCCCCCTCTGCCCCAATTCCCAGTTTTACAGTAAGTTATTATCATTAATCTTTTACCCGTTTGTTATATATATATACACATATTTTATCGAATCTCAAATCAAAAATCAATTCATTGGCTAAATGTAATGGATGGTGTAGCCACCAGGAGGAGCTCGTGTGTATCACGTGACATCGTACGGAGCCGATCCGACGGGTAAAATCGACAGCACGGAATCGCTTCTCCGGGCGTTATCTGATGTGTACAATTCTACGAGTGAAGGCTCGTTGATCGACGGCGTCAGGAATCTAGGAGGTGCTCAGATCAATCTGGACGGTGGAAATTTCTTGATCAGCCGTCCATTGCGCTTACCGGGCGCCTTTGTCGGCAATGTTATGGTACGCATCCCCGCACCTGATTACAGAATTCACTCTGTTGCTAATTTCATTATTAGAAAAAAGAAAAAAGAAAAGTTGAATTAATTGGAAATTGAAAAGTGTTTAATTAGGTGGAGAGAGCAGTGCAACTAATTTTGGTAACGCCCGATAGAAATGGGAAGGAAGGTTGTTGGTAAAAATTAATAAGAGGGTCATAAAAGTCAATTCACTTTCCCTTTCTCCCTGCATACTCGACACTTGTTTGGCCAGTCTATTAAAATGACTTTATTGTTATTATTTTTTTTTAAGAAAAAAATCAATATTCACCATTAATTTGTGAGTTTGTCCCTTTAAAATTTTAATTTCTATCAATTTTACCCCAAAATTTAAATAAGTATTGCAATCTTAATATCTAACAAGTTTTTATTCCAAGTAAGGTTAGAAATTTTTTTATTATAAGTCATTTGTATGATTTGAAATTGATAATTTATTTAGAGTAAAATAACTTCATAATTTTTCTTTTTAATTTATGAATTTTGAGAATGTTATTCAATAGCTAATTTTGAGTCCTAGTTAAACTTATTTTTGTGCATAACTTTATTTTTTTGAAATTAATGCGTTTATGAAGTTTTACATTATTTTTTTTTTTGTTGTAAAAATTAGTAGATGAATTAGCTAAAATTGGATCTAGAGTTAAACCAGTAATATTTGTATAAATTTAGAATCAAAGGATCAAATAGGAGAAATAAGAGACCTAAACTAAAAAAAAGAAGATAATCCATGCCAATTAAAATCATGTTTACTTTTCACATAAAATAAATGAAGTTTACTTAAAAAAAGAAAACAGGAGTCGGTAATATTTAATTTTAATTAAGAACTTTGAAGCATTAATTAAAATTAAAATTAAAATATTTTGAAGGGGAAGCTGTTTGAAAATGGAAAGAAAAGCATTGCTTTCCAAACAATGTTGTTGTTTTCTTGCTCTCAATTAATTTCCTTTTGCAAACGCCTTTCTCCTTCTTCCAACCCAAATCTTGCTTTCTAGATGCCTTCAAAAGTCATCCAATAATAAATCAAGTTTTCTTTTTTGGTTCTCTTTTTGAAGTTTTCTCCCAATTGGGTTTTCCTTTTTCTTTCTTTCTTTATTTATTTTTATGAACCTAATTGCTTTATTGACTCTTACTTCATACCTTTTAAGGCAGTTATACAAATTATTTACTCCCCTGTTGAACTTATAATTAACAATCTTAATTGGAAATTAATCATATAGAATATAAATTAAATGTAAACATATTTTTCAAATTTACATCTACTTAATAACCTACATCATATATATCTGAATTCTATTACTTATTTCAATTTATATATCATTCATGCAAGCCACTACATTATCAAAAAAAATTAATTCTTCAAATCTATAAAAAAAAAATATATATATTAATATGACAGTTAAAGTAGATATTTTAATTGATTTCTTTTGTTTTTTGTTTTTCCCTTCCCAATATTCGTGTGCATATATATTTTAAAAAACTAAACATGTGTATGTATATGCACATGCAATGAGAGTGGGAAAGGGATTTGCAAATCTTGGGTTTACGAAAAATATCAACCAAAACGTGTAGAATTCTTATTAAAATTAAAATGAAAATTTCAGCTTTATACTTAATTGCTTTTCAAACATCTTTTATCATATATTTAAAATTTTATATTTGTAAATTGACTCTTATTCTAATACTTTTAGAAGTAGAATAATTAAATTACTAATTTGAAGGTGAATACAGTCTATGATTGAATCTCATTCTCCACATTGTTGAATTAAAAATGTGTAATTCACTATTTAGAAATTGATGTTTAGCTACAATATATCAAGAGGAAAAATAAAATATAGCATAAGAAAGATTTTGCAAGATTCATAATTATTAATTTGGAGTTTTAATTGATAAAAATATATATTGTGAAGAAATTTTGATGTGGTTTTTTTTTTTTTTTTTGGTAAATTGATTTTAAATTTCAGATATATGGAGGAAGTATACGCGCTTCAGACGATTTTCCCTCTGATGGATATCTAATCGAATTATCGTCTTCGTCAGCGGCGAAGAAAATTAAGAATCAGAGAGCGATGAACTCAACGGAAGACCAGATGCTTAGTTCTTCTTCATCCTATAATTATGAGTATATCACCTTCAGAGACCTTCTATTGGATTCCAATTACAGAGGCGGTGGCATTTCCGTCGTCAATTCCTTAAGAACAAGCATAGACAATTGCTACATAACACATTTCACCACCAATGGGATTTCGGTACAAAGCGGTCACGAAACCTACATCCGCAGCTCTTTCCTCGGCCAACACATTACTGCCGGCGGCGATCCCGGTGAACGAAACTTCTCTGGAACCGGAATCAGTATCGTCGGCAATGACAACGCCATCACTGACGTCGTCATTTTCTCCGCCGCCACTGGAATCCTCATCTCTGGCCAAGCGAACATTATCACAGGCGTGCATTGCTACAACAAGGCATTTGGATTCGGTGGCACAGGAATTTACTTGCAGTTACCAGGACTAACACAGACCAGAATCGTGAATTCGTACATGGATTACACCGGAATCGTAGCGGAAGATCCAGTTCAACTCCACATTTCCAACACATTCTTCCTCGGCGATGCTTCGATTACGCTCAAATCAATCAACGGCGTCGTCAGTGGATTGAATATCGTAGACAATATGTTCAGCGGATCGGACAAAGGAGTGGCTATCGTTCAACTGGACGAATCGAAATCGGCATTCAAGCAAATAGATCAGGTGGTGATCGAGAGAAACAACGCGAAAGGAATGAAAGTGAAATCAACAGTCGGAAGCGCAGAATTGCAAGGAAACGGAACTTCATGGATTCTGGATTTCAGTTCTGTTCTCCTGTTTCCGAATCTTATTAGGAACGTTCAATACTCGTTTCGAAGTACCGAAAGCGGATTTCCGAAGCACATAGTGAGAAATGTATCGGATAATCGGGTGGTGATTGAGACGGACGTTGCGGTGGTCGGAAGCGTGTTTGCGACGGTGGATCAGGGGAAGAGTTAGGGATA

mRNA sequence

ATGGCGACACAACCATTATCTCTCTTTTTCATATTATGCCTTCAAAACATCCTCCTCGTCTTCCCCTTTCTTTCTTCTGCAACACCCACTTTACATTCCCTTTCTTCTCCGGCGCCGCCCACCCATTTTTCCGGCGGAAGCCCCCATTACCACCGCCATTTCTCTAATTTACGCAAACTCAAATCCTCACTAACGGTTCGACACGACGCCGCCCCCTCTGCCCCAATTCCCAGTTTTACACCACCAGGAGGAGCTCGTGTGTATCACGTGACATCGTACGGAGCCGATCCGACGGGTAAAATCGACAGCACGGAATCGCTTCTCCGGGCGTTATCTGATGTGTACAATTCTACGAGTGAAGGCTCGTTGATCGACGGCGTCAGGAATCTAGGAGGTGCTCAGATCAATCTGGACGGTGGAAATTTCTTGATCAGCCGTCCATTGCGCTTACCGGGCGCCTTTGTCGGCAATGTTATGGTACGCATCCCCGCACCTGATTACAGAATTCACTCTATATATGGAGGAAGTATACGCGCTTCAGACGATTTTCCCTCTGATGGATATCTAATCGAATTATCGTCTTCGTCAGCGGCGAAGAAAATTAAGAATCAGAGAGCGATGAACTCAACGGAAGACCAGATGCTTAGTTCTTCTTCATCCTATAATTATGAGTATATCACCTTCAGAGACCTTCTATTGGATTCCAATTACAGAGGCGGTGGCATTTCCGTCGTCAATTCCTTAAGAACAAGCATAGACAATTGCTACATAACACATTTCACCACCAATGGGATTTCGGTACAAAGCGGTCACGAAACCTACATCCGCAGCTCTTTCCTCGGCCAACACATTACTGCCGGCGGCGATCCCGGTGAACGAAACTTCTCTGGAACCGGAATCAGTATCGTCGGCAATGACAACGCCATCACTGACGTCGTCATTTTCTCCGCCGCCACTGGAATCCTCATCTCTGGCCAAGCGAACATTATCACAGGCGTGCATTGCTACAACAAGGCATTTGGATTCGGTGGCACAGGAATTTACTTGCAGTTACCAGGACTAACACAGACCAGAATCGTGAATTCGTACATGGATTACACCGGAATCGTAGCGGAAGATCCAGTTCAACTCCACATTTCCAACACATTCTTCCTCGGCGATGCTTCGATTACGCTCAAATCAATCAACGGCGTCGTCAGTGGATTGAATATCGTAGACAATATGTTCAGCGGATCGGACAAAGGAGTGGCTATCGTTCAACTGGACGAATCGAAATCGGCATTCAAGCAAATAGATCAGGTGGTGATCGAGAGAAACAACGCGAAAGGAATGAAAGTGAAATCAACAGTCGGAAGCGCAGAATTGCAAGGAAACGGAACTTCATGGATTCTGGATTTCAGTTCTGTTCTCCTGTTTCCGAATCTTATTAGGAACGTTCAATACTCGTTTCGAAGTACCGAAAGCGGATTTCCGAAGCACATAGTGAGAAATGTATCGGATAATCGGGTGGTGATTGAGACGGACGTTGCGGTGGTCGGAAGCGTGTTTGCGACGGTGGATCAGGGGAAGAGTTAGGGATA

Coding sequence (CDS)

ATGGCGACACAACCATTATCTCTCTTTTTCATATTATGCCTTCAAAACATCCTCCTCGTCTTCCCCTTTCTTTCTTCTGCAACACCCACTTTACATTCCCTTTCTTCTCCGGCGCCGCCCACCCATTTTTCCGGCGGAAGCCCCCATTACCACCGCCATTTCTCTAATTTACGCAAACTCAAATCCTCACTAACGGTTCGACACGACGCCGCCCCCTCTGCCCCAATTCCCAGTTTTACACCACCAGGAGGAGCTCGTGTGTATCACGTGACATCGTACGGAGCCGATCCGACGGGTAAAATCGACAGCACGGAATCGCTTCTCCGGGCGTTATCTGATGTGTACAATTCTACGAGTGAAGGCTCGTTGATCGACGGCGTCAGGAATCTAGGAGGTGCTCAGATCAATCTGGACGGTGGAAATTTCTTGATCAGCCGTCCATTGCGCTTACCGGGCGCCTTTGTCGGCAATGTTATGGTACGCATCCCCGCACCTGATTACAGAATTCACTCTATATATGGAGGAAGTATACGCGCTTCAGACGATTTTCCCTCTGATGGATATCTAATCGAATTATCGTCTTCGTCAGCGGCGAAGAAAATTAAGAATCAGAGAGCGATGAACTCAACGGAAGACCAGATGCTTAGTTCTTCTTCATCCTATAATTATGAGTATATCACCTTCAGAGACCTTCTATTGGATTCCAATTACAGAGGCGGTGGCATTTCCGTCGTCAATTCCTTAAGAACAAGCATAGACAATTGCTACATAACACATTTCACCACCAATGGGATTTCGGTACAAAGCGGTCACGAAACCTACATCCGCAGCTCTTTCCTCGGCCAACACATTACTGCCGGCGGCGATCCCGGTGAACGAAACTTCTCTGGAACCGGAATCAGTATCGTCGGCAATGACAACGCCATCACTGACGTCGTCATTTTCTCCGCCGCCACTGGAATCCTCATCTCTGGCCAAGCGAACATTATCACAGGCGTGCATTGCTACAACAAGGCATTTGGATTCGGTGGCACAGGAATTTACTTGCAGTTACCAGGACTAACACAGACCAGAATCGTGAATTCGTACATGGATTACACCGGAATCGTAGCGGAAGATCCAGTTCAACTCCACATTTCCAACACATTCTTCCTCGGCGATGCTTCGATTACGCTCAAATCAATCAACGGCGTCGTCAGTGGATTGAATATCGTAGACAATATGTTCAGCGGATCGGACAAAGGAGTGGCTATCGTTCAACTGGACGAATCGAAATCGGCATTCAAGCAAATAGATCAGGTGGTGATCGAGAGAAACAACGCGAAAGGAATGAAAGTGAAATCAACAGTCGGAAGCGCAGAATTGCAAGGAAACGGAACTTCATGGATTCTGGATTTCAGTTCTGTTCTCCTGTTTCCGAATCTTATTAGGAACGTTCAATACTCGTTTCGAAGTACCGAAAGCGGATTTCCGAAGCACATAGTGAGAAATGTATCGGATAATCGGGTGGTGATTGAGACGGACGTTGCGGTGGTCGGAAGCGTGTTTGCGACGGTGGATCAGGGGAAGAGTTAG

Protein sequence

MATQPLSLFFILCLQNILLVFPFLSSATPTLHSLSSPAPPTHFSGGSPHYHRHFSNLRKLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNSTSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIRASDDFPSDGYLIELSSSSAAKKIKNQRAMNSTEDQMLSSSSSYNYEYITFRDLLLDSNYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNFSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDKGVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNLIRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS

Homology

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BLAST of Clc01G26300 vs. NCBI nr
Match: XP_038881228.1 (polygalacturonase QRT3-like [Benincasa hispida])

HSP 1 Score: 901.4 bits (2328), Expect = 3.8e-258
Identity = 469/530 (88.49%), Postives = 494/530 (93.21%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTLHSLSSPAPPTHFSGGSPHYHRHFSNLRKL 60
           MATQP SL FILCL  ILLVFPFLSSATP LHSLSSPAP THFSGG+PHYHRHFSNLRKL
Sbjct: 1   MATQP-SLLFILCLPTILLVFPFLSSATPYLHSLSSPAPATHFSGGTPHYHRHFSNLRKL 60

Query: 61  KSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNSTSE 120
           K+SLTVRHD+APSAP+PSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNSTSE
Sbjct: 61  KASLTVRHDSAPSAPMPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNSTSE 120

Query: 121 GSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIRAS 180
           GSL++G+RNLGGAQINLDGGNFLISRPLRLP A VGNVM            I+GGS+RAS
Sbjct: 121 GSLMEGIRNLGGAQINLDGGNFLISRPLRLPAAGVGNVM------------IHGGSLRAS 180

Query: 181 DDFPSDGYLIEL------SSSSAAKKIKNQRAMNSTEDQMLSSSSSYNYEYITFRDLLLD 240
           DDFPSDGYLIEL      SS SAAKKIK QRAMNSTED MLSSSSSYNYEYI+FRDLLLD
Sbjct: 181 DDFPSDGYLIELSPPSSSSSLSAAKKIKYQRAMNSTEDAMLSSSSSYNYEYISFRDLLLD 240

Query: 241 SNYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERN 300
           SNYRGGGISVVNSLRT+IDNCYITHFTT GISVQ GHETYIRSSFLGQHITAGGDPGERN
Sbjct: 241 SNYRGGGISVVNSLRTTIDNCYITHFTTTGISVQGGHETYIRSSFLGQHITAGGDPGERN 300

Query: 301 FSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGL 360
           FSGTGI +VGNDNA+TDVVIFSAATGI++SGQANIITGVHCYNKA GFGGTGIYLQLPGL
Sbjct: 301 FSGTGIRLVGNDNAVTDVVIFSAATGIVVSGQANIITGVHCYNKATGFGGTGIYLQLPGL 360

Query: 361 TQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDK 420
           TQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSING+VSG+NIVDNMFSGS K
Sbjct: 361 TQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGIVSGVNIVDNMFSGSGK 420

Query: 421 GVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPN 480
           GVAIVQLDESKSAFKQIDQVVIERNNAKGM+VKSTVGSAEL+GNGTSWILDF+SVL FPN
Sbjct: 421 GVAIVQLDESKSAFKQIDQVVIERNNAKGMQVKSTVGSAELEGNGTSWILDFNSVLTFPN 480

Query: 481 LIRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
            IRNVQYSFRS+++GFPKHIVRNVS+NRVVIETDVAVVGSVFATVDQG+S
Sbjct: 481 HIRNVQYSFRSSDNGFPKHIVRNVSENRVVIETDVAVVGSVFATVDQGRS 517

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BLAST of Clc01G26300 vs. NCBI nr
Match: XP_008439486.1 (PREDICTED: polygalacturonase QRT3-like [Cucumis melo] >ADN34218.1 polygalacturonase [Cucumis melo subsp. melo])

HSP 1 Score: 814.7 bits (2103), Expect = 4.6e-232
Identity = 429/529 (81.10%), Postives = 471/529 (89.04%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTL-HSLSSPAPPTHFSGG-SPHYHRHFSNLR 60
           MA++PL LFFIL   + L  FPFLS+A+P+L +S  SPAP THFSGG S HYHRHFSNLR
Sbjct: 3   MASKPL-LFFIL---SSLPFFPFLSTASPSLDYSYPSPAPATHFSGGRSSHYHRHFSNLR 62

Query: 61  KLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNST 120
           KLKSSL+VRHD+A SAP PSFTPP GARVYHVTSYGADPTGK DSTESLL+A SDVYNS 
Sbjct: 63  KLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNSN 122

Query: 121 SEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIR 180
            EGSL+DG+RNLGG QINLDGGNFLISRPLRLPG  VGNVM            I+GGS+R
Sbjct: 123 GEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVM------------IHGGSLR 182

Query: 181 ASDDFPSDGYLIELSSSSAAKKIKNQRAMN--STEDQML-SSSSSYNYEYITFRDLLLDS 240
           ASDDFPSDGYLIELSSSSAAK   NQ+ +N  ST D +L SSSSSY+YEYI+F+DLLLDS
Sbjct: 183 ASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYSYEYISFKDLLLDS 242

Query: 241 NYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNF 300
           N+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHE YIR+SFLGQHITAGGDPGERNF
Sbjct: 243 NFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERNF 302

Query: 301 SGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLT 360
           SGTGIS+VGNDNAITDVVIFSAATGIL+SGQAN++TGVHCYNKA GFGGTGIYLQLPGLT
Sbjct: 303 SGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGTGIYLQLPGLT 362

Query: 361 QTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDKG 420
           QTRI+NSYMDYTGIVAEDPVQL I NTFFLGD+ ITLKSINGV SG+NIVDNMFSGSDKG
Sbjct: 363 QTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDKG 422

Query: 421 VAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNL 480
           VAIVQLDESKSAFKQIDQV +ERNN KGM+ KSTVGSAEL+GNGTSW+LDF+ VLLFPNL
Sbjct: 423 VAIVQLDESKSAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNL 482

Query: 481 IRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           I+NVQY+FRS+++GFPKHIVRNVSDN+VVIETDVAVVGSVFATVDQG S
Sbjct: 483 IKNVQYTFRSSDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQGMS 515

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BLAST of Clc01G26300 vs. NCBI nr
Match: KAA0052445.1 (polygalacturonase QRT3-like [Cucumis melo var. makuwa] >TYK13377.1 polygalacturonase QRT3-like [Cucumis melo var. makuwa])

HSP 1 Score: 812.0 bits (2096), Expect = 3.0e-231
Identity = 429/530 (80.94%), Postives = 470/530 (88.68%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTLHSL--SSPAPPTHFSGG-SPHYHRHFSNL 60
           MA++PL LFFIL   + L  FPFLS+A+P+L     +SPAP THFSGG S HYHRHFSNL
Sbjct: 3   MASKPL-LFFIL---SSLPFFPFLSTASPSLDYSYPNSPAPATHFSGGRSSHYHRHFSNL 62

Query: 61  RKLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNS 120
           RKLKSSL+VRHD+A SAP PSFTPP GARVYHVTSYGADPTGK DSTESLL+A SDVYNS
Sbjct: 63  RKLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNS 122

Query: 121 TSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSI 180
             EGSL+DG+RNLGG QINLDGGNFLISRPLRLPG  VGNVM            I+GGS+
Sbjct: 123 NGEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVM------------IHGGSL 182

Query: 181 RASDDFPSDGYLIELSSSSAAKKIKNQRAMN--STEDQML-SSSSSYNYEYITFRDLLLD 240
           RASDDFPSDGYLIELSSSSAAK   NQ+ +N  ST D +L SSSSSYNYEYI+F+DLLLD
Sbjct: 183 RASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYNYEYISFKDLLLD 242

Query: 241 SNYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERN 300
           SN+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHE YIR+SFLGQHITAGGDPGERN
Sbjct: 243 SNFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERN 302

Query: 301 FSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGL 360
           FSGTGIS+VGNDNAITDVVIFSAATGIL+SGQAN++TGVHCYNKA GFGGTGIYLQLPGL
Sbjct: 303 FSGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGTGIYLQLPGL 362

Query: 361 TQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDK 420
           TQTRI+NSYMDYTGIVAEDPVQL I NTFFLGD+ ITLKSINGV SG+NIVDNMFSGSDK
Sbjct: 363 TQTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDK 422

Query: 421 GVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPN 480
           GVAIVQLDESKSAFKQIDQV +ERN+ KGM+ KSTVGSAEL+GNGTSW+LDF+ VLLFPN
Sbjct: 423 GVAIVQLDESKSAFKQIDQVAVERNSVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPN 482

Query: 481 LIRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           LI+NVQY+FRS+++GFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQG S
Sbjct: 483 LIKNVQYTFRSSDNGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGIS 516

[Close]

BLAST of Clc01G26300 vs. NCBI nr
Match: XP_004134539.1 (polygalacturonase QRT3 [Cucumis sativus] >KGN49507.1 hypothetical protein Csa_004206 [Cucumis sativus])

HSP 1 Score: 807.0 bits (2083), Expect = 9.7e-230
Identity = 416/531 (78.34%), Postives = 468/531 (88.14%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTLHSLSSPAPPTHFSGG-SPHYHRHFSNLRK 60
           MA++PL  F +L L     + PFLSSATP+L S SSPAPPTHFSGG S HYHRHFSNLRK
Sbjct: 1   MASKPLLFFILLSLP----ILPFLSSATPSLDSHSSPAPPTHFSGGSSSHYHRHFSNLRK 60

Query: 61  LKSSLTVRHDAAPSAPIPSF--TPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNS 120
           LKSSL+VRH++APSAP PSF  TPP GARVYHVTSYGADPTGK DST+SLL+A SDVYNS
Sbjct: 61  LKSSLSVRHESAPSAPNPSFITTPPSGARVYHVTSYGADPTGKTDSTDSLLKAFSDVYNS 120

Query: 121 TSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSI 180
             EGSL++G++NLGG QINLDGGNF+ISRPLRLPG  VGNV+            I+GGS+
Sbjct: 121 NGEGSLMEGIKNLGGVQINLDGGNFMISRPLRLPGVGVGNVV------------IHGGSL 180

Query: 181 RASDDFPSDGYLIELSSSSAAKK--IKNQRAMNSTEDQ--MLSSSSSYNYEYITFRDLLL 240
           RASDDFPSDGYLIELSSSS+A K    NQ+ +NS+     ++SS SSYNYEYI+F+DLLL
Sbjct: 181 RASDDFPSDGYLIELSSSSSAPKNSFDNQKTINSSSQDAILISSPSSYNYEYISFKDLLL 240

Query: 241 DSNYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGER 300
           DSN+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHETYIRSSFLGQHITAGGDPGER
Sbjct: 241 DSNFRGGGISVLNSLRITIDNCYITHFTTIGISVQGGHETYIRSSFLGQHITAGGDPGER 300

Query: 301 NFSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPG 360
           NFSGTGIS++GNDNA+TDVVIFSAATG+L+ GQAN++TGVHCYNKA GFGGTGIYLQLPG
Sbjct: 301 NFSGTGISLLGNDNAVTDVVIFSAATGVLVQGQANVLTGVHCYNKATGFGGTGIYLQLPG 360

Query: 361 LTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSD 420
           LTQTRI+NSYMDYTGIVAEDPVQL I+NTFFLGD+ ITLKS+NGV SG+NIVDNMFSGSD
Sbjct: 361 LTQTRILNSYMDYTGIVAEDPVQLQIANTFFLGDSYITLKSMNGVASGVNIVDNMFSGSD 420

Query: 421 KGVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFP 480
           KGVAIVQLDESKSAFKQ+DQVV+ERNN +GM+ KSTVGSAEL+GNGTSW+LDF+ VLLFP
Sbjct: 421 KGVAIVQLDESKSAFKQVDQVVVERNNVRGMQAKSTVGSAELEGNGTSWVLDFNPVLLFP 480

Query: 481 NLIRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           NLI+NVQY+FRS ++GFPKHIVRNVSDNRVVIETDVAVVGSVFA VDQG S
Sbjct: 481 NLIKNVQYTFRSIDNGFPKHIVRNVSDNRVVIETDVAVVGSVFARVDQGTS 515

[Close]

BLAST of Clc01G26300 vs. NCBI nr
Match: XP_022146708.1 (polygalacturonase QRT3-like isoform X1 [Momordica charantia])

HSP 1 Score: 751.9 bits (1940), Expect = 3.7e-213
Identity = 392/525 (74.67%), Postives = 446/525 (84.95%), Query Frame = 0


Query: 7   SLFFILCLQNILLVFPFLSSATPTLHSLSSPAPPTHFSGGSPHYHRHFSNLRKLKSSLTV 66
           +L F L L  +LL      SA+P+   LSSPAP    SG S HY+RH + L+KLK+SL V
Sbjct: 36  ALIFTLWLPAMLLWTS--ESASPSTVHLSSPAPAAQVSGRSRHYNRHLAKLQKLKASLPV 95

Query: 67  RHDA---APSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNSTSEGSL 126
           R D+   AP+   PSF  PGGARVYHVT+YGADPTG++DSTESLLRALSD Y S  EG L
Sbjct: 96  RRDSLSIAPTPTPPSFQAPGGARVYHVTAYGADPTGRVDSTESLLRALSDAYGSPGEGWL 155

Query: 127 IDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIRASDDF 186
           +DG+RNLGGA INLDGGN+LISRPLRLPGA VGN++++            GGS+RASDDF
Sbjct: 156 MDGIRNLGGAHINLDGGNYLISRPLRLPGAGVGNIVIQ------------GGSLRASDDF 215

Query: 187 PSDGYLIELSSSSAAK------KIKNQRAMNSTEDQMLSSSSSYNYEYITFRDLLLDSNY 246
           PSDGYLI+LS SS++       KIK Q+   S E   L+SSSSYNYEYITFRDLLLDSNY
Sbjct: 216 PSDGYLIDLSPSSSSSPSSPVAKIKKQKERKSMEVVKLASSSSYNYEYITFRDLLLDSNY 275

Query: 247 RGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNFSG 306
           RGGGIS++NSLRTSIDNCYITHFTT GISVQSGHET+IRSSFLGQHITAG DPGERNFSG
Sbjct: 276 RGGGISIINSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQHITAGADPGERNFSG 335

Query: 307 TGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLTQT 366
           TGIS++GNDN++TDVV+FSAAT IL+SGQANI+TGVHCYNKA GFGGTGIYL+LPGLTQT
Sbjct: 336 TGISLIGNDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGFGGTGIYLKLPGLTQT 395

Query: 367 RIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDKGVA 426
           RIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVV+GLNIVDNMFSGSD+GV 
Sbjct: 396 RIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGLNIVDNMFSGSDRGVP 455

Query: 427 IVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNLIR 486
           IV+LD+SKSAF++I+QVVIERNNA+GM++KST  SAE QGNGTSWI+DF+ +LLFPNLIR
Sbjct: 456 IVKLDQSKSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSWIIDFNPILLFPNLIR 515

Query: 487 NVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQG 523
           NVQYSFRS+  GFPKH+VRNVS+NRVVIE+DVAV GSVFATVDQG
Sbjct: 516 NVQYSFRSSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 546

[Close]

BLAST of Clc01G26300 vs. ExPASy Swiss-Prot
Match: O49432 (Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.3e-149
Identity = 282/484 (58.26%), Postives = 354/484 (73.14%), Query Frame = 0


Query: 44  SGGSPHYHRHFSNLRKLKSSLTVRHDAAPSAPIPSFTPP---GGARVYHVTSYGADPTGK 103
           SG    + R  + ++ LK+SL  R+  A  +P P  TPP    G RVY V SYGADPTGK
Sbjct: 31  SGSMSPHDRALAEMQALKASLVRRNLPALVSPPP--TPPQAVPGPRVYQVISYGADPTGK 90

Query: 104 IDSTESLLRALSDVYNSTSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMV 163
           +DST+++L+A+ + ++  + G L+ G+ +LGGA+I+L GG++LISRPLR P A  GN++ 
Sbjct: 91  LDSTDAILKAMEEAFDGPNHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAGNLL- 150

Query: 164 RIPAPDYRIHSIYGGSIRASDDFPSDGYLIELSSSSAAKKIKNQRAMNSTEDQMLSSSSS 223
                      I GG++RAS+DFP D YLIEL                       SS   
Sbjct: 151 -----------ISGGTLRASNDFPVDRYLIELKDE--------------------SSKLQ 210

Query: 224 YNYEYITFRDLLLDSNYRGGGISVVNSLRTSIDNCYITHF-TTNGISVQSGHETYIRSSF 283
           Y +EYIT RDLL+D NYRGG I+V+NSLRTSIDNCYIT F  TNGI V+SGHETYIR+SF
Sbjct: 211 YIFEYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSF 270

Query: 284 LGQHITAGGDPGERNFSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKA 343
           LGQHITAGGD GER+FSGT I+++GNDNA+TD VIFSA  G+++SGQAN+++GVHCYNKA
Sbjct: 271 LGQHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKA 330

Query: 344 FGFGGTGIYLQLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVV 403
            GFGGTGIYL+LPGLTQ RIVNSY+DYTGIVAEDPVQL IS TFFLGDA I LKSI G +
Sbjct: 331 TGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYI 390

Query: 404 SGLNIVDNMFSGSDKGVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNG 463
            G++IVDNMFSGS  GV IVQLD+  +AF  + QVV++RN+  GM  KSTV    + GNG
Sbjct: 391 RGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNG 450

Query: 464 TSWILDFSSVLLFPNLIRNVQYSFRSTESG-FPKHIVRNVSDNRVVIETDVAVVGSVFAT 523
           TSW +DF+ VLLFP+LI +VQY+  ++E+G FP H +RNVSDNRVV+ET+  V G+V+ T
Sbjct: 451 TSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVT 480

[Close]

BLAST of Clc01G26300 vs. ExPASy TrEMBL
Match: E5GCM0 (Polygalacturonase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.2e-232
Identity = 429/529 (81.10%), Postives = 471/529 (89.04%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTL-HSLSSPAPPTHFSGG-SPHYHRHFSNLR 60
           MA++PL LFFIL   + L  FPFLS+A+P+L +S  SPAP THFSGG S HYHRHFSNLR
Sbjct: 3   MASKPL-LFFIL---SSLPFFPFLSTASPSLDYSYPSPAPATHFSGGRSSHYHRHFSNLR 62

Query: 61  KLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNST 120
           KLKSSL+VRHD+A SAP PSFTPP GARVYHVTSYGADPTGK DSTESLL+A SDVYNS 
Sbjct: 63  KLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNSN 122

Query: 121 SEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIR 180
            EGSL+DG+RNLGG QINLDGGNFLISRPLRLPG  VGNVM            I+GGS+R
Sbjct: 123 GEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVM------------IHGGSLR 182

Query: 181 ASDDFPSDGYLIELSSSSAAKKIKNQRAMN--STEDQML-SSSSSYNYEYITFRDLLLDS 240
           ASDDFPSDGYLIELSSSSAAK   NQ+ +N  ST D +L SSSSSY+YEYI+F+DLLLDS
Sbjct: 183 ASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYSYEYISFKDLLLDS 242

Query: 241 NYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNF 300
           N+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHE YIR+SFLGQHITAGGDPGERNF
Sbjct: 243 NFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERNF 302

Query: 301 SGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLT 360
           SGTGIS+VGNDNAITDVVIFSAATGIL+SGQAN++TGVHCYNKA GFGGTGIYLQLPGLT
Sbjct: 303 SGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGTGIYLQLPGLT 362

Query: 361 QTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDKG 420
           QTRI+NSYMDYTGIVAEDPVQL I NTFFLGD+ ITLKSINGV SG+NIVDNMFSGSDKG
Sbjct: 363 QTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDKG 422

Query: 421 VAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNL 480
           VAIVQLDESKSAFKQIDQV +ERNN KGM+ KSTVGSAEL+GNGTSW+LDF+ VLLFPNL
Sbjct: 423 VAIVQLDESKSAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNL 482

Query: 481 IRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           I+NVQY+FRS+++GFPKHIVRNVSDN+VVIETDVAVVGSVFATVDQG S
Sbjct: 483 IKNVQYTFRSSDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQGMS 515

[Close]

BLAST of Clc01G26300 vs. ExPASy TrEMBL
Match: A0A1S3AYU3 (polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103484272 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 2.2e-232
Identity = 429/529 (81.10%), Postives = 471/529 (89.04%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTL-HSLSSPAPPTHFSGG-SPHYHRHFSNLR 60
           MA++PL LFFIL   + L  FPFLS+A+P+L +S  SPAP THFSGG S HYHRHFSNLR
Sbjct: 3   MASKPL-LFFIL---SSLPFFPFLSTASPSLDYSYPSPAPATHFSGGRSSHYHRHFSNLR 62

Query: 61  KLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNST 120
           KLKSSL+VRHD+A SAP PSFTPP GARVYHVTSYGADPTGK DSTESLL+A SDVYNS 
Sbjct: 63  KLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNSN 122

Query: 121 SEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIR 180
            EGSL+DG+RNLGG QINLDGGNFLISRPLRLPG  VGNVM            I+GGS+R
Sbjct: 123 GEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVM------------IHGGSLR 182

Query: 181 ASDDFPSDGYLIELSSSSAAKKIKNQRAMN--STEDQML-SSSSSYNYEYITFRDLLLDS 240
           ASDDFPSDGYLIELSSSSAAK   NQ+ +N  ST D +L SSSSSY+YEYI+F+DLLLDS
Sbjct: 183 ASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYSYEYISFKDLLLDS 242

Query: 241 NYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNF 300
           N+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHE YIR+SFLGQHITAGGDPGERNF
Sbjct: 243 NFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERNF 302

Query: 301 SGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLT 360
           SGTGIS+VGNDNAITDVVIFSAATGIL+SGQAN++TGVHCYNKA GFGGTGIYLQLPGLT
Sbjct: 303 SGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGTGIYLQLPGLT 362

Query: 361 QTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDKG 420
           QTRI+NSYMDYTGIVAEDPVQL I NTFFLGD+ ITLKSINGV SG+NIVDNMFSGSDKG
Sbjct: 363 QTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDKG 422

Query: 421 VAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNL 480
           VAIVQLDESKSAFKQIDQV +ERNN KGM+ KSTVGSAEL+GNGTSW+LDF+ VLLFPNL
Sbjct: 423 VAIVQLDESKSAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNL 482

Query: 481 IRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           I+NVQY+FRS+++GFPKHIVRNVSDN+VVIETDVAVVGSVFATVDQG S
Sbjct: 483 IKNVQYTFRSSDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQGMS 515

[Close]

BLAST of Clc01G26300 vs. ExPASy TrEMBL
Match: A0A5A7UFF1 (Polygalacturonase QRT3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0010050 PE=4 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.5e-231
Identity = 429/530 (80.94%), Postives = 470/530 (88.68%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTLHSL--SSPAPPTHFSGG-SPHYHRHFSNL 60
           MA++PL LFFIL   + L  FPFLS+A+P+L     +SPAP THFSGG S HYHRHFSNL
Sbjct: 3   MASKPL-LFFIL---SSLPFFPFLSTASPSLDYSYPNSPAPATHFSGGRSSHYHRHFSNL 62

Query: 61  RKLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNS 120
           RKLKSSL+VRHD+A SAP PSFTPP GARVYHVTSYGADPTGK DSTESLL+A SDVYNS
Sbjct: 63  RKLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNS 122

Query: 121 TSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSI 180
             EGSL+DG+RNLGG QINLDGGNFLISRPLRLPG  VGNVM            I+GGS+
Sbjct: 123 NGEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVM------------IHGGSL 182

Query: 181 RASDDFPSDGYLIELSSSSAAKKIKNQRAMN--STEDQML-SSSSSYNYEYITFRDLLLD 240
           RASDDFPSDGYLIELSSSSAAK   NQ+ +N  ST D +L SSSSSYNYEYI+F+DLLLD
Sbjct: 183 RASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYNYEYISFKDLLLD 242

Query: 241 SNYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERN 300
           SN+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHE YIR+SFLGQHITAGGDPGERN
Sbjct: 243 SNFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERN 302

Query: 301 FSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGL 360
           FSGTGIS+VGNDNAITDVVIFSAATGIL+SGQAN++TGVHCYNKA GFGGTGIYLQLPGL
Sbjct: 303 FSGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGTGIYLQLPGL 362

Query: 361 TQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDK 420
           TQTRI+NSYMDYTGIVAEDPVQL I NTFFLGD+ ITLKSINGV SG+NIVDNMFSGSDK
Sbjct: 363 TQTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDK 422

Query: 421 GVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPN 480
           GVAIVQLDESKSAFKQIDQV +ERN+ KGM+ KSTVGSAEL+GNGTSW+LDF+ VLLFPN
Sbjct: 423 GVAIVQLDESKSAFKQIDQVAVERNSVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPN 482

Query: 481 LIRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           LI+NVQY+FRS+++GFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQG S
Sbjct: 483 LIKNVQYTFRSSDNGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGIS 516

[Close]

BLAST of Clc01G26300 vs. ExPASy TrEMBL
Match: A0A0A0KMC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526410 PE=4 SV=1)

HSP 1 Score: 807.0 bits (2083), Expect = 4.7e-230
Identity = 416/531 (78.34%), Postives = 468/531 (88.14%), Query Frame = 0


Query: 1   MATQPLSLFFILCLQNILLVFPFLSSATPTLHSLSSPAPPTHFSGG-SPHYHRHFSNLRK 60
           MA++PL  F +L L     + PFLSSATP+L S SSPAPPTHFSGG S HYHRHFSNLRK
Sbjct: 1   MASKPLLFFILLSLP----ILPFLSSATPSLDSHSSPAPPTHFSGGSSSHYHRHFSNLRK 60

Query: 61  LKSSLTVRHDAAPSAPIPSF--TPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNS 120
           LKSSL+VRH++APSAP PSF  TPP GARVYHVTSYGADPTGK DST+SLL+A SDVYNS
Sbjct: 61  LKSSLSVRHESAPSAPNPSFITTPPSGARVYHVTSYGADPTGKTDSTDSLLKAFSDVYNS 120

Query: 121 TSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSI 180
             EGSL++G++NLGG QINLDGGNF+ISRPLRLPG  VGNV+            I+GGS+
Sbjct: 121 NGEGSLMEGIKNLGGVQINLDGGNFMISRPLRLPGVGVGNVV------------IHGGSL 180

Query: 181 RASDDFPSDGYLIELSSSSAAKK--IKNQRAMNSTEDQ--MLSSSSSYNYEYITFRDLLL 240
           RASDDFPSDGYLIELSSSS+A K    NQ+ +NS+     ++SS SSYNYEYI+F+DLLL
Sbjct: 181 RASDDFPSDGYLIELSSSSSAPKNSFDNQKTINSSSQDAILISSPSSYNYEYISFKDLLL 240

Query: 241 DSNYRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGER 300
           DSN+RGGGISV+NSLR +IDNCYITHFTT GISVQ GHETYIRSSFLGQHITAGGDPGER
Sbjct: 241 DSNFRGGGISVLNSLRITIDNCYITHFTTIGISVQGGHETYIRSSFLGQHITAGGDPGER 300

Query: 301 NFSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPG 360
           NFSGTGIS++GNDNA+TDVVIFSAATG+L+ GQAN++TGVHCYNKA GFGGTGIYLQLPG
Sbjct: 301 NFSGTGISLLGNDNAVTDVVIFSAATGVLVQGQANVLTGVHCYNKATGFGGTGIYLQLPG 360

Query: 361 LTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSD 420
           LTQTRI+NSYMDYTGIVAEDPVQL I+NTFFLGD+ ITLKS+NGV SG+NIVDNMFSGSD
Sbjct: 361 LTQTRILNSYMDYTGIVAEDPVQLQIANTFFLGDSYITLKSMNGVASGVNIVDNMFSGSD 420

Query: 421 KGVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFP 480
           KGVAIVQLDESKSAFKQ+DQVV+ERNN +GM+ KSTVGSAEL+GNGTSW+LDF+ VLLFP
Sbjct: 421 KGVAIVQLDESKSAFKQVDQVVVERNNVRGMQAKSTVGSAELEGNGTSWVLDFNPVLLFP 480

Query: 481 NLIRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQGKS 525
           NLI+NVQY+FRS ++GFPKHIVRNVSDNRVVIETDVAVVGSVFA VDQG S
Sbjct: 481 NLIKNVQYTFRSIDNGFPKHIVRNVSDNRVVIETDVAVVGSVFARVDQGTS 515

[Close]

BLAST of Clc01G26300 vs. ExPASy TrEMBL
Match: A0A6J1CZ95 (polygalacturonase QRT3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015845 PE=4 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 1.8e-213
Identity = 392/525 (74.67%), Postives = 446/525 (84.95%), Query Frame = 0


Query: 7   SLFFILCLQNILLVFPFLSSATPTLHSLSSPAPPTHFSGGSPHYHRHFSNLRKLKSSLTV 66
           +L F L L  +LL      SA+P+   LSSPAP    SG S HY+RH + L+KLK+SL V
Sbjct: 36  ALIFTLWLPAMLLWTS--ESASPSTVHLSSPAPAAQVSGRSRHYNRHLAKLQKLKASLPV 95

Query: 67  RHDA---APSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNSTSEGSL 126
           R D+   AP+   PSF  PGGARVYHVT+YGADPTG++DSTESLLRALSD Y S  EG L
Sbjct: 96  RRDSLSIAPTPTPPSFQAPGGARVYHVTAYGADPTGRVDSTESLLRALSDAYGSPGEGWL 155

Query: 127 IDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIRASDDF 186
           +DG+RNLGGA INLDGGN+LISRPLRLPGA VGN++++            GGS+RASDDF
Sbjct: 156 MDGIRNLGGAHINLDGGNYLISRPLRLPGAGVGNIVIQ------------GGSLRASDDF 215

Query: 187 PSDGYLIELSSSSAAK------KIKNQRAMNSTEDQMLSSSSSYNYEYITFRDLLLDSNY 246
           PSDGYLI+LS SS++       KIK Q+   S E   L+SSSSYNYEYITFRDLLLDSNY
Sbjct: 216 PSDGYLIDLSPSSSSSPSSPVAKIKKQKERKSMEVVKLASSSSYNYEYITFRDLLLDSNY 275

Query: 247 RGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNFSG 306
           RGGGIS++NSLRTSIDNCYITHFTT GISVQSGHET+IRSSFLGQHITAG DPGERNFSG
Sbjct: 276 RGGGISIINSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQHITAGADPGERNFSG 335

Query: 307 TGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLTQT 366
           TGIS++GNDN++TDVV+FSAAT IL+SGQANI+TGVHCYNKA GFGGTGIYL+LPGLTQT
Sbjct: 336 TGISLIGNDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGFGGTGIYLKLPGLTQT 395

Query: 367 RIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDKGVA 426
           RIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVV+GLNIVDNMFSGSD+GV 
Sbjct: 396 RIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGLNIVDNMFSGSDRGVP 455

Query: 427 IVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNLIR 486
           IV+LD+SKSAF++I+QVVIERNNA+GM++KST  SAE QGNGTSWI+DF+ +LLFPNLIR
Sbjct: 456 IVKLDQSKSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSWIIDFNPILLFPNLIR 515

Query: 487 NVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSVFATVDQG 523
           NVQYSFRS+  GFPKH+VRNVS+NRVVIE+DVAV GSVFATVDQG
Sbjct: 516 NVQYSFRSSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 546

[Close]

BLAST of Clc01G26300 vs. TAIR 10
Match: AT4G20050.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 531.2 bits (1367), Expect = 9.6e-151
Identity = 282/484 (58.26%), Postives = 354/484 (73.14%), Query Frame = 0


Query: 44  SGGSPHYHRHFSNLRKLKSSLTVRHDAAPSAPIPSFTPP---GGARVYHVTSYGADPTGK 103
           SG    + R  + ++ LK+SL  R+  A  +P P  TPP    G RVY V SYGADPTGK
Sbjct: 31  SGSMSPHDRALAEMQALKASLVRRNLPALVSPPP--TPPQAVPGPRVYQVISYGADPTGK 90

Query: 104 IDSTESLLRALSDVYNSTSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMV 163
           +DST+++L+A+ + ++  + G L+ G+ +LGGA+I+L GG++LISRPLR P A  GN++ 
Sbjct: 91  LDSTDAILKAMEEAFDGPNHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAGNLL- 150

Query: 164 RIPAPDYRIHSIYGGSIRASDDFPSDGYLIELSSSSAAKKIKNQRAMNSTEDQMLSSSSS 223
                      I GG++RAS+DFP D YLIEL                       SS   
Sbjct: 151 -----------ISGGTLRASNDFPVDRYLIELKDE--------------------SSKLQ 210

Query: 224 YNYEYITFRDLLLDSNYRGGGISVVNSLRTSIDNCYITHF-TTNGISVQSGHETYIRSSF 283
           Y +EYIT RDLL+D NYRGG I+V+NSLRTSIDNCYIT F  TNGI V+SGHETYIR+SF
Sbjct: 211 YIFEYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSF 270

Query: 284 LGQHITAGGDPGERNFSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKA 343
           LGQHITAGGD GER+FSGT I+++GNDNA+TD VIFSA  G+++SGQAN+++GVHCYNKA
Sbjct: 271 LGQHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKA 330

Query: 344 FGFGGTGIYLQLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVV 403
            GFGGTGIYL+LPGLTQ RIVNSY+DYTGIVAEDPVQL IS TFFLGDA I LKSI G +
Sbjct: 331 TGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYI 390

Query: 404 SGLNIVDNMFSGSDKGVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNG 463
            G++IVDNMFSGS  GV IVQLD+  +AF  + QVV++RN+  GM  KSTV    + GNG
Sbjct: 391 RGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNG 450

Query: 464 TSWILDFSSVLLFPNLIRNVQYSFRSTESG-FPKHIVRNVSDNRVVIETDVAVVGSVFAT 523
           TSW +DF+ VLLFP+LI +VQY+  ++E+G FP H +RNVSDNRVV+ET+  V G+V+ T
Sbjct: 451 TSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVT 480

[Close]

BLAST of Clc01G26300 vs. TAIR 10
Match: AT4G20050.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 531.2 bits (1367), Expect = 9.6e-151
Identity = 282/484 (58.26%), Postives = 354/484 (73.14%), Query Frame = 0


Query: 44  SGGSPHYHRHFSNLRKLKSSLTVRHDAAPSAPIPSFTPP---GGARVYHVTSYGADPTGK 103
           SG    + R  + ++ LK+SL  R+  A  +P P  TPP    G RVY V SYGADPTGK
Sbjct: 31  SGSMSPHDRALAEMQALKASLVRRNLPALVSPPP--TPPQAVPGPRVYQVISYGADPTGK 90

Query: 104 IDSTESLLRALSDVYNSTSEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMV 163
           +DST+++L+A+ + ++  + G L+ G+ +LGGA+I+L GG++LISRPLR P A  GN++ 
Sbjct: 91  LDSTDAILKAMEEAFDGPNHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAGNLL- 150

Query: 164 RIPAPDYRIHSIYGGSIRASDDFPSDGYLIELSSSSAAKKIKNQRAMNSTEDQMLSSSSS 223
                      I GG++RAS+DFP D YLIEL                       SS   
Sbjct: 151 -----------ISGGTLRASNDFPVDRYLIELKDE--------------------SSKLQ 210

Query: 224 YNYEYITFRDLLLDSNYRGGGISVVNSLRTSIDNCYITHF-TTNGISVQSGHETYIRSSF 283
           Y +EYIT RDLL+D NYRGG I+V+NSLRTSIDNCYIT F  TNGI V+SGHETYIR+SF
Sbjct: 211 YIFEYITLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSF 270

Query: 284 LGQHITAGGDPGERNFSGTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKA 343
           LGQHITAGGD GER+FSGT I+++GNDNA+TD VIFSA  G+++SGQAN+++GVHCYNKA
Sbjct: 271 LGQHITAGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKA 330

Query: 344 FGFGGTGIYLQLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVV 403
            GFGGTGIYL+LPGLTQ RIVNSY+DYTGIVAEDPVQL IS TFFLGDA I LKSI G +
Sbjct: 331 TGFGGTGIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYI 390

Query: 404 SGLNIVDNMFSGSDKGVAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNG 463
            G++IVDNMFSGS  GV IVQLD+  +AF  + QVV++RN+  GM  KSTV    + GNG
Sbjct: 391 RGVSIVDNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNG 450

Query: 464 TSWILDFSSVLLFPNLIRNVQYSFRSTESG-FPKHIVRNVSDNRVVIETDVAVVGSVFAT 523
           TSW +DF+ VLLFP+LI +VQY+  ++E+G FP H +RNVSDNRVV+ET+  V G+V+ T
Sbjct: 451 TSWTVDFNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVT 480

[Close]

BLAST of Clc01G26300 vs. TAIR 10
Match: AT4G20040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 408.7 bits (1049), Expect = 7.2e-114
Identity = 227/460 (49.35%), Postives = 306/460 (66.52%), Query Frame = 0


Query: 59  KLKSSLTVRHDAAPSAPIPSFTPPGGARVYHVTSYGADPTGKIDSTESLLRALSDVYNST 118
           K++  L V    +P +   S +P    +V +   YGADPTG  DS++++L AL+D +   
Sbjct: 40  KIQERLAVTPTLSPVSSPSSHSPKMVGKVIYPIGYGADPTGGQDSSDAILEALTDAFQLQ 99

Query: 119 SEGSLIDGVRNLGGAQINLDGGNFLISRPLRLPGAFVGNVMVRIPAPDYRIHSIYGGSIR 178
           +   ++  V +LGG  I+L GG+++I +PLR P +  GN++V+            GG+ R
Sbjct: 100 TGLEMLPRVADLGGLVIDLQGGSYMIGKPLRFPSSGGGNLVVK------------GGTFR 159

Query: 179 ASDDFPSDGYLIELSSSSAAK--KIKNQRAMNSTEDQMLSSSSSYNYEYITFRDLLLDSN 238
           AS+ FP D +L+EL +S+A K  K+  + + +  +DQ    SS   YE +TF+D+L DS 
Sbjct: 160 ASELFPGDRHLVELVASNAKKPMKMSPEESFSDQKDQ----SSGIFYEDVTFQDVLFDSR 219

Query: 239 YRGGGISVVNSLRTSIDNCYITHFTTNGISVQSGHETYIRSSFLGQHITAGGDPGERNFS 298
           +RGGGI V++S R  I NCY  HFTT GI VQ GHETYI +SFLGQH T GGD  ER F+
Sbjct: 220 FRGGGILVIDSARIRITNCYFLHFTTQGIKVQGGHETYISNSFLGQHSTVGGDREERGFT 279

Query: 299 GTGISIVGNDNAITDVVIFSAATGILISGQANIITGVHCYNKAFGFGGTGIYLQLPGLTQ 358
           GTGI I  NDNAITDVVIFSA  GI ++G AN++TGVHCYNKA  FGG GI ++      
Sbjct: 280 GTGIDISSNDNAITDVVIFSAGIGISLNGGANMVTGVHCYNKATWFGGIGILVK---SHL 339

Query: 359 TRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVSGLNIVDNMFSGSDK-G 418
           TRI N Y+DYTGIV EDPV +H++N  FLGDA+I L+S++G +SG+NIV+NMFSG+ K  
Sbjct: 340 TRIDNCYLDYTGIVIEDPVHVHVTNALFLGDANIVLRSVHGKISGVNIVNNMFSGTAKNN 399

Query: 419 VAIVQLDESKSAFKQIDQVVIERNNAKGMKVKSTVGSAELQGNGTSWILDFSSVLLFPNL 478
             IV+L+     F  I+QVVI++NNA+GM +KST G A +  NGT WI DFS VL+FPN 
Sbjct: 400 FPIVKLE---GEFHDINQVVIDQNNAEGMMLKSTTGKAMVSANGTRWIADFSPVLVFPNR 459

Query: 479 IRNVQYSFRSTESGFPKHIVRNVSDNRVVIETDVAVVGSV 516
           I + Q+SF +     P + V NVS+N VV+ETD AV G+V
Sbjct: 460 INHYQHSFFAQSGQIPANAVTNVSNNMVVVETDRAVTGTV 477

The following BLAST results are available for this feature:

BLAST of Clc01G26300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881228.1	3.8e-258	88.49	polygalacturonase QRT3-like [Benincasa hispida]	[more]
XP_008439486.1	4.6e-232	81.10	PREDICTED: polygalacturonase QRT3-like [Cucumis melo] >ADN34218.1 polygalacturon...	[more]
KAA0052445.1	3.0e-231	80.94	polygalacturonase QRT3-like [Cucumis melo var. makuwa] >TYK13377.1 polygalacturo...	[more]
XP_004134539.1	9.7e-230	78.34	polygalacturonase QRT3 [Cucumis sativus] >KGN49507.1 hypothetical protein Csa_00...	[more]
XP_022146708.1	3.7e-213	74.67	polygalacturonase QRT3-like isoform X1 [Momordica charantia]	[more]

BLAST of Clc01G26300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49432	1.3e-149	58.26	Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1	[more]

BLAST of Clc01G26300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCM0	2.2e-232	81.10	Polygalacturonase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3AYU3	2.2e-232	81.10	polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103484272 PE=4 SV=1	[more]
A0A5A7UFF1	1.5e-231	80.94	Polygalacturonase QRT3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0KMC1	4.7e-230	78.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526410 PE=4 SV=1	[more]
A0A6J1CZ95	1.8e-213	74.67	polygalacturonase QRT3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Clc01G26300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20050.1	9.6e-151	58.26	Pectin lyase-like superfamily protein	[more]
AT4G20050.2	9.6e-151	58.26	Pectin lyase-like superfamily protein	[more]
AT4G20040.1	7.2e-114	49.35	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 399..420 e-value: 590.0 score: 8.8 coord: 247..269 e-value: 43.0 score: 13.0 coord: 304..325 e-value: 440.0 score: 9.6 coord: 223..246 e-value: 7900.0 score: 0.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 88..481 e-value: 7.1E-18 score: 66.8
None	No IPR available	PANTHER	PTHR33928:SF7	POLYGALACTURONASE QRT3	coord: 46..523
IPR039279	Polygalacturonase QRT3-like	PANTHER	PTHR33928	POLYGALACTURONASE QRT3	coord: 46..523
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 78..453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G26300.2	Clc01G26300.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0004650	polygalacturonase activity