Clc01G25950 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G25950
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain-containing protein
LocationClcChr01: 36106775 .. 36108023 (+)
RNA-Seq ExpressionClc01G25950
SyntenyClc01G25950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGAGAAACCTTCACAGTTGGAAGGTGTAGAAGAAGCCCAAATTGCGAGATGAGGAAGATGCTAGAGCTTCCATCTCATATCATTGACCTAATTTTCTCTAAACTTCCCATCCCCATTTTGGCTATTTGCAGGCTGGTTTGTAAAGCTTGGAATAATCTGATTTTGAGTCGTCAGTTTGATCCAATTTCGAAGCCTATATTTGCCTATATTTCTCCTCCTCATCATTATCCGAATAAGCTCCATTGTATTGACTTTGACTTTGACTTTGACTTTGATTCCAAACCTTTCAAAGAAGGGAAGACTTGTTTTGTTGCTTCATTTACCTTCCATCCTCATTTCTCCACAATTGAAATTATCAATTCTTGTAATGGCCTATTATGTTTTGTGGACAGATCAAATAATGTGCTTGGAGGAGAAACAATGAAAGCTTGTGTTTTTATACTAAATCCGATGACAAATCAATACACCCAAGTTCCTTCACATGATTATGCACATGATTATGGTGGCGCCACTGATTCATATGGCTACGGATTTGGTTTTAGCCCTAATACAAAACAATACAAAATAGTTAGGCTTCCGAGAGCGACAATGACACCTTCTGCTATCTTATTTGTAGCTGACATTTTCACATTTGAAACAAGTAGCTATGGGAAATGGACTAGTGTTACAATTCCATCCATTTATGCTCTTACTCGTGATGATGGTATTTACTTCAATGGAGGACTTTATTGGAGAGGATATCATTTCGTCGTTCCACGTTTTCATAGACGTCGTTTCATTTTACGTTTTGATCTAGAAAATGAGAAATTTGAAGAAATTTTTCTTCCCCAAATTGAAGAACAAGATTTTCGTAGTGACGATTTTGGATTTCAGTTCTTTACTGGCAGTCTCTATGCCTCAAATTTCAATGATGAAAGTTGCAGGTTCCATGTGTGGAAGATGGAACAAGATTATTCATGGACCGAAGAATTTATTATACCCATTAGGAATCGGAATATGCTAATTCATTTTTCTATAAGGAGGATTAGTAAATGTAATCGTTTCCAACTCATCAAAATTTTTAAAGATAGAAAGATCTTGTGTGTTGATTATACATTAGATTATTTAATCTTGTATGACTCAGAGACCAAGGAGATGGAGGCATTGTATCATAATCTATGCGATACCACTAAGCAAATATTATGGATTTATGAAATTGAGTCCTTCAATTTTGGGAGTAATGCTCTATTTCTCTAGTTTTTAT

mRNA sequence

ATGGAAAGAGAAACCTTCACAGTTGGAAGGTGTAGAAGAAGCCCAAATTGCGAGATGAGGAAGATGCTAGAGCTTCCATCTCATATCATTGACCTAATTTTCTCTAAACTTCCCATCCCCATTTTGGCTATTTGCAGGCTGGTTTGTAAAGCTTGGAATAATCTGATTTTGAGTCGTCAGTTTGATCCAATTTCGAAGCCTATATTTGCCTATATTTCTCCTCCTCATCATTATCCGAATAAGCTCCATTGTATTGACTTTGACTTTGACTTTGACTTTGATTCCAAACCTTTCAAAGAAGGGAAGACTTGTTTTGTTGCTTCATTTACCTTCCATCCTCATTTCTCCACAATTGAAATTATCAATTCTTGTAATGGCCTATTATGTTTTGTGGACAGATCAAATAATGTGCTTGGAGGAGAAACAATGAAAGCTTGTGTTTTTATACTAAATCCGATGACAAATCAATACACCCAAGTTCCTTCACATGATTATGCACATGATTATGGTGGCGCCACTGATTCATATGGCTACGGATTTGGTTTTAGCCCTAATACAAAACAATACAAAATAGTTAGGCTTCCGAGAGCGACAATGACACCTTCTGCTATCTTATTTGTAGCTGACATTTTCACATTTGAAACAAGTAGCTATGGGAAATGGACTAGTGTTACAATTCCATCCATTTATGCTCTTACTCGTGATGATGGTATTTACTTCAATGGAGGACTTTATTGGAGAGGATATCATTTCGTCGTTCCACGTTTTCATAGACGTCGTTTCATTTTACGTTTTGATCTAGAAAATGAGAAATTTGAAGAAATTTTTCTTCCCCAAATTGAAGAACAAGATTTTCGTAGTGACGATTTTGGATTTCAGTTCTTTACTGGCAGTCTCTATGCCTCAAATTTCAATGATGAAAGTTGCAGGTTCCATGTGTGGAAGATGGAACAAGATTATTCATGGACCGAAGAATTTATTATACCCATTAGGAATCGGAATATGCTAATTCATTTTTCTATAAGGAGGATTAGTAAATGTAATCGTTTCCAACTCATCAAAATTTTTAAAGATAGAAAGATCTTGTGTGTTGATTATACATTAGATTATTTAATCTTGTATGACTCAGAGACCAAGGAGATGGAGGCATTGTATCATAATCTATGCGATACCACTAAGCAAATATTATGGATTTATGAAATTGAGTCCTTCAATTTTGGGAGTAATGCTCTATTTCTCTAGTTTTTAT

Coding sequence (CDS)

ATGGAAAGAGAAACCTTCACAGTTGGAAGGTGTAGAAGAAGCCCAAATTGCGAGATGAGGAAGATGCTAGAGCTTCCATCTCATATCATTGACCTAATTTTCTCTAAACTTCCCATCCCCATTTTGGCTATTTGCAGGCTGGTTTGTAAAGCTTGGAATAATCTGATTTTGAGTCGTCAGTTTGATCCAATTTCGAAGCCTATATTTGCCTATATTTCTCCTCCTCATCATTATCCGAATAAGCTCCATTGTATTGACTTTGACTTTGACTTTGACTTTGATTCCAAACCTTTCAAAGAAGGGAAGACTTGTTTTGTTGCTTCATTTACCTTCCATCCTCATTTCTCCACAATTGAAATTATCAATTCTTGTAATGGCCTATTATGTTTTGTGGACAGATCAAATAATGTGCTTGGAGGAGAAACAATGAAAGCTTGTGTTTTTATACTAAATCCGATGACAAATCAATACACCCAAGTTCCTTCACATGATTATGCACATGATTATGGTGGCGCCACTGATTCATATGGCTACGGATTTGGTTTTAGCCCTAATACAAAACAATACAAAATAGTTAGGCTTCCGAGAGCGACAATGACACCTTCTGCTATCTTATTTGTAGCTGACATTTTCACATTTGAAACAAGTAGCTATGGGAAATGGACTAGTGTTACAATTCCATCCATTTATGCTCTTACTCGTGATGATGGTATTTACTTCAATGGAGGACTTTATTGGAGAGGATATCATTTCGTCGTTCCACGTTTTCATAGACGTCGTTTCATTTTACGTTTTGATCTAGAAAATGAGAAATTTGAAGAAATTTTTCTTCCCCAAATTGAAGAACAAGATTTTCGTAGTGACGATTTTGGATTTCAGTTCTTTACTGGCAGTCTCTATGCCTCAAATTTCAATGATGAAAGTTGCAGGTTCCATGTGTGGAAGATGGAACAAGATTATTCATGGACCGAAGAATTTATTATACCCATTAGGAATCGGAATATGCTAATTCATTTTTCTATAAGGAGGATTAGTAAATGTAATCGTTTCCAACTCATCAAAATTTTTAAAGATAGAAAGATCTTGTGTGTTGATTATACATTAGATTATTTAATCTTGTATGACTCAGAGACCAAGGAGATGGAGGCATTGTATCATAATCTATGCGATACCACTAAGCAAATATTATGGATTTATGAAATTGAGTCCTTCAATTTTGGGAGTAATGCTCTATTTCTCTAG

Protein sequence

MERETFTVGRCRRSPNCEMRKMLELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMTPSAILFVADIFTFETSSYGKWTSVTIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHRRRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDESCRFHVWKMEQDYSWTEEFIIPIRNRNMLIHFSIRRISKCNRFQLIKIFKDRKILCVDYTLDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGSNALFL
Homology
BLAST of Clc01G25950 vs. NCBI nr
Match: KGN59660.1 (hypothetical protein Csa_001105 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-66
Identity = 183/420 (43.57%), Postives = 244/420 (58.10%), Query Frame = 0

Query: 24  ELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKP--IFAYISPPHHYPNK 83
           +LPSHII+ I SKL + +L   R VCKAWNN+IL+ +   ++    +FA+I PPH     
Sbjct: 14  QLPSHIIETIISKLSVSVLLNLRRVCKAWNNIILTGKLLHLNSKANLFAHI-PPH---QM 73

Query: 84  LHCIDFDFDFDFDSKPFKEGK-TCFVASFTFHPHFSTIEIINSCNGLLCFVD-----RSN 143
           LHCI      DFDSK  KE K  C V SFTFHPHFST +IINSCNGLLCFV+     + +
Sbjct: 74  LHCI------DFDSKTLKEKKINCIVGSFTFHPHFSTFKIINSCNGLLCFVNSKIMSKEH 133

Query: 144 NVLGGETMKACVFILNPMTNQYTQVPSHDYAHD--YGGATDSYGYGFGFSPNTKQYKIVR 203
             +G E  +    IL+P+TN+Y ++P +D      Y G    Y +GFG+SPN KQYKIV+
Sbjct: 134 EKIGFELTQPFAIILSPITNEYVELPLNDAWKKTFYTG----YSFGFGYSPNKKQYKIVK 193

Query: 204 LPRATMTPSAILFVADIF---TFETSSYGKWTSVTIPSIY-ALTRDDGIYFNGGLYWRGY 263
           L          L+VADIF   TF   SYGKW+ V I   +  L   DG+Y NG LYW GY
Sbjct: 194 LSSIRRG----LYVADIFTIGTFTRGSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGY 253

Query: 264 --HFVVPRFHRRRFILRFDLENEKFEEIFLPQ-IEEQDFRSDDFGFQFFTGSLYAS---- 323
             +++  R   +  +LRFD+E+EKFE +  P  +E++ FR        F  +LY S    
Sbjct: 254 NGNYLDMRNGGKVVLLRFDVEDEKFEVVSFPHGVEDEVFRGSS-NIWIFNNTLYLSCFDF 313

Query: 324 NFNDESCRFHVWK-MEQDYSW---TEEFII--PIRNR---NMLIHFSIRRI--------- 383
           N N+   RFHVWK ME+ YSW    +EF+I  PI N      L+H+ IR +         
Sbjct: 314 NTNNGIGRFHVWKLMEEGYSWFKLEQEFVIRQPISNHWSTVALLHY-IRYLKYRGYYDFS 373

Query: 384 SKCNR--FQLIKIFKDRKILCVDYTLDYLILYDSETKEMEALYHNLCDTTKQILWIYEIE 403
           S C R  FQLIK+F+D K+L +  +   LILYDS+T++ E  Y++L       LWIY+I+
Sbjct: 374 SSCTRYHFQLIKVFEDEKMLFL-ISRKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDID 412

BLAST of Clc01G25950 vs. NCBI nr
Match: KGN59658.1 (hypothetical protein Csa_001357 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 8.6e-56
Identity = 164/422 (38.86%), Postives = 232/422 (54.98%), Query Frame = 0

Query: 24  ELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKP--IFAYISPPHHYPNK 83
           + PSHII+ I SKL   IL   R VCKAWNNLIL+ +   ++    +FA+I+P      K
Sbjct: 11  QFPSHIIETILSKLSFFILLNLRPVCKAWNNLILTSKLLNLNSKANLFAHITP----YQK 70

Query: 84  LHCIDFDFDFDFDSKPFKEG-KTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNVLGG 143
           L+CI      DFDSK  KEG K C V SFTFHP F T +++NSCNGL CFV  +  ++  
Sbjct: 71  LYCI------DFDSKILKEGKKNCIVRSFTFHPRFFTFKMVNSCNGLFCFV--NTEMISD 130

Query: 144 ETMK-------ACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVR 203
           +  K           ILNPMTN+  ++  ++    Y G++    +GFG+SPN KQYKIV+
Sbjct: 131 QCEKKSFGLKQPLAIILNPMTNE--ELSLNNSLKFYPGSS----FGFGYSPNKKQYKIVK 190

Query: 204 LP-------RATMTPSAI--LFVADIFT---FETSSYGKWTSVTIPSIYALTRDDGIYFN 263
           L        R++   S +   +VA+IFT   F    +GKW    +P++  L    G+Y N
Sbjct: 191 LSLIKIPHLRSSYVASHLRSSYVAEIFTIGKFARGRHGKWRQNRVPAVRVLW-SFGVYLN 250

Query: 264 GGLYWRGYHFVVPRFHRRRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYA 323
           G LYW+ Y+    R      +LRFD+E+EKFE +  PQ+   D          F  +LY 
Sbjct: 251 GSLYWKAYN--TTRIRANAVLLRFDVEDEKFEVVSFPQVVRDDAFLISSNIWIFNNTLYV 310

Query: 324 SNFND--ESCRFHVWK-MEQDYSWT---EEFIIPIRNRNMLIHFSIRRIS-------KCN 383
           S F+   +   FHVWK ME+DYSW    ++F I    +++  HFS+  +S       +C+
Sbjct: 311 SYFDSKIDMGSFHVWKMMEEDYSWVKLEQKFAI---MKSIKDHFSLMMVSYIRDYMIRCH 370

Query: 384 RFQLIKIFKDRKILCVDYTLDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGS 411
            FQLIK+F+D  +L +  +   LILYDS+  + EA++  L       L I+EI+S NF S
Sbjct: 371 -FQLIKVFEDETMLFL-ISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDS 406

BLAST of Clc01G25950 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 2.9e-51
Identity = 160/402 (39.80%), Postives = 208/402 (51.74%), Query Frame = 0

Query: 24  ELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDP---ISKPIFAYISPPHHY-- 83
           ELP  I+ LIFSKLP   L  CRLV   WNNL+LS +FDP   IS   FA     H Y  
Sbjct: 15  ELPPDILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISNLFFA-----HFYSC 74

Query: 84  -PNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFST----IEIINSCNGLLCFVDR 143
               LHC+D D           EG +  VASFTFHP+ S+    I IINSC+GL+  +  
Sbjct: 75  RDRNLHCVDLD-------PQHLEGMST-VASFTFHPNVSSGSCKISIINSCSGLISLLIT 134

Query: 144 SNNVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVR 203
                G      CV  LNPMTN+Y ++P+       G +   Y YG GFSP TKQYK+ R
Sbjct: 135 KRRRRGHRPGVVCV--LNPMTNEYFKLPTF---RSKGDSVKDYFYGLGFSPRTKQYKLAR 194

Query: 204 LPRATMTPSAILFVADIFTFETSSYGKWTSV-TIPSIYALTRDDGIYFNGGLYWRGYHFV 263
                       F+ +IF F TS   +WT V ++P  Y L    G+YFNGGLYW G    
Sbjct: 195 THYVCHE-----FIVEIFAFGTSC--EWTPVGSVP--YFLNEYHGVYFNGGLYWVGGQ-Q 254

Query: 264 VPRFHRRRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDESC--- 323
           +P       I R DLE++KF++I  P         DD G   + G    + +    C   
Sbjct: 255 LPNAGLSDVIYRLDLEDDKFKQISFP------LDGDDEGDFPYIGVYNDTLYLTLCCGDF 314

Query: 324 RFHVWKMEQDYSWTEEFIIPIRNRNMLIHFSIRR---ISKCNRFQLIKIFKDRKILCVDY 383
            +HVWKME+D+SW +EF++ +      +H S+ R   I  C   QLIK  +D  ILC+  
Sbjct: 315 EYHVWKMEEDFSWIKEFVLALPEN---VHHSLPRHHPIGYC--LQLIKACEDGNILCLCA 374

Query: 384 TLDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGS 409
            L YLILYD +T+  E L     +  K  +W+Y+I+SFNF S
Sbjct: 375 GL-YLILYDPKTETTELLTDQDFEIKKH-MWVYQIDSFNFNS 375

BLAST of Clc01G25950 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-50
Identity = 158/401 (39.40%), Postives = 209/401 (52.12%), Query Frame = 0

Query: 19  MRKMLELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDP---ISKPIFAYISPP 78
           + K  ELP  ++ LIFSKLP   L  CRLV   WNNLI S +FDP   IS   FA     
Sbjct: 10  VNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSS 69

Query: 79  HHYPNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFST----IEIINSCNGLLCFV 138
            H PN LHC++FD           EG +  VASF FHP  S+    I IINSC+GL+  +
Sbjct: 70  RH-PN-LHCVEFD-------PQHAEGMST-VASFAFHPDLSSGSCRITIINSCSGLISLI 129

Query: 139 DRSNNVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKI 198
                  G      CV  LNP+TN+Y ++P+   +   G    +Y YG GFSP T QYK 
Sbjct: 130 INKRRRRGHRLDLVCV--LNPITNEYFKLPT---SRSKGDRVPNYCYGLGFSPTTNQYK- 189

Query: 199 VRLPRATMTPSAILFVADIFTFETSSYGKWTSV-TIPSIYALTRDDGIYFNGGLYWRGYH 258
             L R   T     F+ DIF F TS   +WT V ++P+   L    G+Y NGGLYW G  
Sbjct: 190 --LARTHFTHDE--FIVDIFAFGTSC--EWTPVGSVPNF--LNEYHGVYLNGGLYWVGSQ 249

Query: 259 FVVPR---FHRRRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDE 318
             +P          I R DL++EKFE+I  P         DD     + G+LY + F  E
Sbjct: 250 -KLPNGGISDYTEVIYRLDLKDEKFEKISFPL-----DGGDDPYIAVYNGTLYLT-FCCE 309

Query: 319 SCRFHVWKMEQDYSWTEEFIIPIRNRNMLIHFSIRRISKCNRFQLIKIFKDRKILCVDYT 378
              +H WKME+D+SW++EF++ +      +H S+R        QLIK  +D  ILC+ Y 
Sbjct: 310 DFDYHAWKMEEDFSWSKEFVLALPEN---VHHSLRHHPIGYYLQLIKFCEDGNILCL-YA 369

Query: 379 LDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGS 409
              LILYD  T+ +E L  N     K+ +W+++IESF+F S
Sbjct: 370 GILLILYDPSTQTVEIL-TNQDFEIKEAMWVHQIESFSFNS 374

BLAST of Clc01G25950 vs. NCBI nr
Match: XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-47
Identity = 151/388 (38.92%), Postives = 209/388 (53.87%), Query Frame = 0

Query: 26  PSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKLHCI 85
           P +II +I SK+P+  L  CRLVCK+WNNLIL+ +FDP     FAY  P       L+C+
Sbjct: 19  PDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLSFAYDCP----SRTLYCV 78

Query: 86  DFDFDFDFDSKPFKEGKTCFVASFTFHPHFST----IEIINSCNGLLCFVDRSNNVLGGE 145
           DFD         + EG    + SFTFHP FST    I IIN+CNGLL  +  S   LG  
Sbjct: 79  DFD-------PMYFEGMNS-IGSFTFHPKFSTSDSSISIINACNGLLSLL-ISKRKLG-- 138

Query: 146 TMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMTP 205
           ++   + ILNPMTN+Y + P+ + +  +      Y YG GF+P TKQYKI    R +  P
Sbjct: 139 SVSYVLGILNPMTNEYFKFPA-EKSKSHCCCGRLYSYGLGFNPKTKQYKIA---RTSFRP 198

Query: 206 SAILFVADIFTFETSSYGKWTSV-TIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHRRR 265
                + +IFTF  S++  WT V  +PS+  +  D G+YF GGLYW   +   P      
Sbjct: 199 DESTTLVEIFTF-GSTHQVWTPVGFLPSL--VVEDHGVYFKGGLYWVA-NQPDPHDSSIS 258

Query: 266 FILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDESCRFHVWKMEQDY 325
            I R DLENEK E+I  PQ     +    F F  F G+LY +    ++ ++ VWKM+ ++
Sbjct: 259 AIYRLDLENEKLEKISCPQ-----YIGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNF 318

Query: 326 SWTEEFIIPIRNRNMLIHFSIRRISKCNRFQLIKIFKDRKILCVDYTLDYLILYDSETKE 385
           SW + F+I  R RN+       +    ++   IK  +D KILC+   L +LILYD +TK 
Sbjct: 319 SWIKAFVIS-RPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGL-HLILYDPKTKS 373

Query: 386 MEALYHNLCDTTKQILWIYEIESFNFGS 409
            E L        K  L ++ I++FNF S
Sbjct: 379 AEILTDQSVKVEKH-LHVHHIDAFNFNS 373

BLAST of Clc01G25950 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-10
Identity = 78/283 (27.56%), Postives = 120/283 (42.40%), Query Frame = 0

Query: 25  LPSHIIDLIFSKLPIPILAICRLVCKAWNNLI-----LSRQFDPISKP-IFAYISPPHHY 84
           LP  II  IFS+LPI  +A    VC++W +++     LS      +KP +  +   P   
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSP--I 87

Query: 85  PNKLHCIDFDFDFDFDSKPFKEGKTCFVASFT--FHPHFSTIEIINSCNGLLCFVDRSNN 144
            N LH +D            +E K      FT  F       +++ SCNGLLC  D   N
Sbjct: 88  RNGLHFLDLS----------EEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYN 147

Query: 145 VLGGETMKACVFILNPMTNQYTQVP--SHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRL 204
                     +++ NP T    ++P  S+ Y HD         +GFGF   TK+YK++++
Sbjct: 148 --------DSLYLYNPFTTNSLELPECSNKY-HD-----QELVFGFGFHEMTKEYKVLKI 207

Query: 205 P--RATMTPSAILF--------------VADIFTFETSSYGKWTSVTIPSIYALTRDDGI 264
              R + + +  ++              +  + +  T     W S+       + R    
Sbjct: 208 VYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEA 267

Query: 265 YFNGGLYWRGYHFVV-PRFH--RRRFILRFDLENEKFEEIFLP 279
             NG L     HFV  PR H   R+F+  FDLE+E+F+EI  P
Sbjct: 268 LVNGRL-----HFVTRPRRHVPDRKFV-SFDLEDEEFKEIPKP 278

BLAST of Clc01G25950 vs. ExPASy Swiss-Prot
Match: Q9C627 (Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.4e-07
Identity = 69/255 (27.06%), Postives = 106/255 (41.57%), Query Frame = 0

Query: 25  LPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKLHC 84
           LP  +I  I S+LP+  +AICRLV K W +++ S  F       F   SPP   P  L  
Sbjct: 24  LPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDF----TESFLIKSPPR--PRLLFT 83

Query: 85  IDFDFDFDFDSKPFKEG--KTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNV-LGGE 144
           I +   +   S P      +   V +  +H  FS    + S   +  F+  +N + L G+
Sbjct: 84  IRYGSKWHLFSAPQPRNFDENFPVVATDYHKGFSGNWCMQSFQLVNGFIYLNNRLSLKGK 143

Query: 145 TMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMTP 204
             +  V I NP T Q   +P      D G         FG+ P  KQ+K++ +  +    
Sbjct: 144 IDRVSV-IWNPSTGQQIPLP------DLGVKNSHSKSFFGYDPIEKQFKVLCITSSK--- 203

Query: 205 SAILFVADIFTFETSSYGKWTSVTIP-SIYALTRDDGIYFNGGLYWRGYHFVVPRFHRRR 264
                   + T  T     W  +      Y   + +GI  NG LY+R  + ++ RF  R 
Sbjct: 204 -----EHQVLTLGTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYYRNTNAMIVRFDVRS 256

Query: 265 FILRFDLENEKFEEI 276
              RF +E + + EI
Sbjct: 264 EEFRF-VEIKMYVEI 256

BLAST of Clc01G25950 vs. ExPASy Swiss-Prot
Match: Q9SAB5 (Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana OX=3702 GN=At1g11620 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.4e-07
Identity = 68/317 (21.45%), Postives = 121/317 (38.17%), Query Frame = 0

Query: 23  LELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKL 82
           ++L S +++ I S++P   L   R  CK W  LI   +F         Y        N  
Sbjct: 4   MDLSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVFNNE 63

Query: 83  HCID--FDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNVLGG 142
           H +   F     +    F + + C V    F    S    I+ C+GLL +V         
Sbjct: 64  HIVSPLFGSTTSYVGIDFNKPENCGV-KLPFPIALSPAINISHCDGLLLYV--------- 123

Query: 143 ETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNT--KQYKIVRLPRAT 202
              K+ + + NP+ +Q   +     +  +  + D+YG G+ F+ ++    YK+VR     
Sbjct: 124 --TKSMLLVANPLLSQKRWIKC---SEGFDHSMDAYGLGYLFNQSSGFYDYKVVRFRCGI 183

Query: 203 MTPSAILFVADIFTFETSSYGKWTSVTIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHR 262
              S +    +++ F++ S+             L     +   G  YW GY+      + 
Sbjct: 184 KNSSRV----EVYAFKSDSWKVVVDTNFGGFDGLPL-SSVCLRGTPYWLGYN---KSGNE 243

Query: 263 RRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFN-----DESCRFHV 322
              I  FD   E+FE +FLP    Q   S +       G       +      E+C+ H+
Sbjct: 244 LMSIQSFDFSKERFEPLFLP---PQSIGSRNLVKYISLGIFRGDQLSLLLECHETCKLHL 293

Query: 323 WKMEQDYSWTEEFIIPI 331
           W M++ + W+    + +
Sbjct: 304 WVMKKQH-WSRLMTVDV 293

BLAST of Clc01G25950 vs. ExPASy Swiss-Prot
Match: Q9FFS9 (Putative F-box protein At5g41510 OS=Arabidopsis thaliana OX=3702 GN=At5g41510 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.8e-06
Identity = 70/318 (22.01%), Postives = 125/318 (39.31%), Query Frame = 0

Query: 25  LPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPI---------SKPIFAYISPP 84
           LP  +I+ IFS++P+  +   RL CK+WNNL  S  F  +          K +   +   
Sbjct: 8   LPRDLIEEIFSRVPLTSMKAVRLTCKSWNNLSKSESFTKVHIGRAATREEKTMIVDV--- 67

Query: 85  HHYPNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSN 144
              P+KL+ +    D   D  P  E K  F      H ++   ++++    LLC +    
Sbjct: 68  --MPHKLNLMSIVID---DVTPSAEFKGQF---SLLHKNYRINQVLHYEGLLLCIMKDPT 127

Query: 145 NVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVR-L 204
            ++          + NP   Q   +    +   +G     Y  G+    +    K +R L
Sbjct: 128 RIV----------VWNPYLGQTRWIQLRYFHRPHGIDHFRYALGYADKESCSSLKFLRFL 187

Query: 205 PRATMTPSAILFVADIFTFETSSYGKWTSVTIPSIYAL-TRDDGIYFNGGLYWRGYHFVV 264
                 P    F  +I+ F++   G WT++ +   + + +    +   G  YW       
Sbjct: 188 DYFYKAPEEEFFWYEIYDFDS---GLWTTLNVTPHWGIYSTCPCVSLKGNTYWPAKERST 247

Query: 265 PRFHRRRFILRFDLENEKFEEIF-LPQIEEQDFRSDDFGFQFFTGSLYASNFNDES--CR 324
             F  + +I+RFD   E+F  +  LP   E  F S     +    +L+    + +S    
Sbjct: 248 QGF--QDYIIRFDFTRERFGPLLALPTDRESSFVSLSCVKEEKLAALFKHRLHHDSYEYE 299

BLAST of Clc01G25950 vs. ExPASy Swiss-Prot
Match: Q9ZNQ3 (F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 GN=At2g27520 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 65/267 (24.34%), Postives = 102/267 (38.20%), Query Frame = 0

Query: 23  LELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKL 82
           L+LP  ++D I S+LP   L   R  CK WN L    +F          I+   H   K 
Sbjct: 4   LDLPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEF----------ITKQFHKAAKQ 63

Query: 83  HCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNG-LLCFVDRSNNVLGGE 142
             +    +F         G      +    P+   I  +  CNG LLC  +  N      
Sbjct: 64  DLVLMLSNF---------GVYSMSTNLKEIPNNIEIAQVFHCNGLLLCSTEEGN------ 123

Query: 143 TMKACVFILNPMTNQYTQV-PSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMT 202
             K  + ++NP T Q   + P  DY +++         G+G +   K Y   ++ R T  
Sbjct: 124 --KTKLVVVNPCTGQTRWIEPRTDYNYNH-----DIALGYGNNSTKKSYDSYKILRITYG 183

Query: 203 PSAILFVADIFTFETSSYGKWTSV--TIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHR 262
              +    +IF  +++S+   + V   +   Y      G+ F G  YW  Y     +F+ 
Sbjct: 184 CKLV----EIFELKSNSWRVLSKVHPNVEKHYY----GGVSFKGNTYWLSY----TKFN- 222

Query: 263 RRFILRFDLENEKFEEIFLPQIEEQDF 286
              IL FD   E F  + LP + +  F
Sbjct: 244 ---ILSFDFTTETFRSVPLPFLYQDGF 222

BLAST of Clc01G25950 vs. ExPASy TrEMBL
Match: A0A0A0LCB8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 183/420 (43.57%), Postives = 244/420 (58.10%), Query Frame = 0

Query: 24  ELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKP--IFAYISPPHHYPNK 83
           +LPSHII+ I SKL + +L   R VCKAWNN+IL+ +   ++    +FA+I PPH     
Sbjct: 14  QLPSHIIETIISKLSVSVLLNLRRVCKAWNNIILTGKLLHLNSKANLFAHI-PPH---QM 73

Query: 84  LHCIDFDFDFDFDSKPFKEGK-TCFVASFTFHPHFSTIEIINSCNGLLCFVD-----RSN 143
           LHCI      DFDSK  KE K  C V SFTFHPHFST +IINSCNGLLCFV+     + +
Sbjct: 74  LHCI------DFDSKTLKEKKINCIVGSFTFHPHFSTFKIINSCNGLLCFVNSKIMSKEH 133

Query: 144 NVLGGETMKACVFILNPMTNQYTQVPSHDYAHD--YGGATDSYGYGFGFSPNTKQYKIVR 203
             +G E  +    IL+P+TN+Y ++P +D      Y G    Y +GFG+SPN KQYKIV+
Sbjct: 134 EKIGFELTQPFAIILSPITNEYVELPLNDAWKKTFYTG----YSFGFGYSPNKKQYKIVK 193

Query: 204 LPRATMTPSAILFVADIF---TFETSSYGKWTSVTIPSIY-ALTRDDGIYFNGGLYWRGY 263
           L          L+VADIF   TF   SYGKW+ V I   +  L   DG+Y NG LYW GY
Sbjct: 194 LSSIRRG----LYVADIFTIGTFTRGSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGY 253

Query: 264 --HFVVPRFHRRRFILRFDLENEKFEEIFLPQ-IEEQDFRSDDFGFQFFTGSLYAS---- 323
             +++  R   +  +LRFD+E+EKFE +  P  +E++ FR        F  +LY S    
Sbjct: 254 NGNYLDMRNGGKVVLLRFDVEDEKFEVVSFPHGVEDEVFRGSS-NIWIFNNTLYLSCFDF 313

Query: 324 NFNDESCRFHVWK-MEQDYSW---TEEFII--PIRNR---NMLIHFSIRRI--------- 383
           N N+   RFHVWK ME+ YSW    +EF+I  PI N      L+H+ IR +         
Sbjct: 314 NTNNGIGRFHVWKLMEEGYSWFKLEQEFVIRQPISNHWSTVALLHY-IRYLKYRGYYDFS 373

Query: 384 SKCNR--FQLIKIFKDRKILCVDYTLDYLILYDSETKEMEALYHNLCDTTKQILWIYEIE 403
           S C R  FQLIK+F+D K+L +  +   LILYDS+T++ E  Y++L       LWIY+I+
Sbjct: 374 SSCTRYHFQLIKVFEDEKMLFL-ISRKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDID 412

BLAST of Clc01G25950 vs. ExPASy TrEMBL
Match: A0A0A0LCZ3 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.2e-56
Identity = 164/422 (38.86%), Postives = 232/422 (54.98%), Query Frame = 0

Query: 24  ELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKP--IFAYISPPHHYPNK 83
           + PSHII+ I SKL   IL   R VCKAWNNLIL+ +   ++    +FA+I+P      K
Sbjct: 11  QFPSHIIETILSKLSFFILLNLRPVCKAWNNLILTSKLLNLNSKANLFAHITP----YQK 70

Query: 84  LHCIDFDFDFDFDSKPFKEG-KTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNVLGG 143
           L+CI      DFDSK  KEG K C V SFTFHP F T +++NSCNGL CFV  +  ++  
Sbjct: 71  LYCI------DFDSKILKEGKKNCIVRSFTFHPRFFTFKMVNSCNGLFCFV--NTEMISD 130

Query: 144 ETMK-------ACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVR 203
           +  K           ILNPMTN+  ++  ++    Y G++    +GFG+SPN KQYKIV+
Sbjct: 131 QCEKKSFGLKQPLAIILNPMTNE--ELSLNNSLKFYPGSS----FGFGYSPNKKQYKIVK 190

Query: 204 LP-------RATMTPSAI--LFVADIFT---FETSSYGKWTSVTIPSIYALTRDDGIYFN 263
           L        R++   S +   +VA+IFT   F    +GKW    +P++  L    G+Y N
Sbjct: 191 LSLIKIPHLRSSYVASHLRSSYVAEIFTIGKFARGRHGKWRQNRVPAVRVLW-SFGVYLN 250

Query: 264 GGLYWRGYHFVVPRFHRRRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYA 323
           G LYW+ Y+    R      +LRFD+E+EKFE +  PQ+   D          F  +LY 
Sbjct: 251 GSLYWKAYN--TTRIRANAVLLRFDVEDEKFEVVSFPQVVRDDAFLISSNIWIFNNTLYV 310

Query: 324 SNFND--ESCRFHVWK-MEQDYSWT---EEFIIPIRNRNMLIHFSIRRIS-------KCN 383
           S F+   +   FHVWK ME+DYSW    ++F I    +++  HFS+  +S       +C+
Sbjct: 311 SYFDSKIDMGSFHVWKMMEEDYSWVKLEQKFAI---MKSIKDHFSLMMVSYIRDYMIRCH 370

Query: 384 RFQLIKIFKDRKILCVDYTLDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGS 411
            FQLIK+F+D  +L +  +   LILYDS+  + EA++  L       L I+EI+S NF S
Sbjct: 371 -FQLIKVFEDETMLFL-ISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDS 406

BLAST of Clc01G25950 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50
Identity = 158/401 (39.40%), Postives = 209/401 (52.12%), Query Frame = 0

Query: 19  MRKMLELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDP---ISKPIFAYISPP 78
           + K  ELP  ++ LIFSKLP   L  CRLV   WNNLI S +FDP   IS   FA     
Sbjct: 10  VNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSS 69

Query: 79  HHYPNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFST----IEIINSCNGLLCFV 138
            H PN LHC++FD           EG +  VASF FHP  S+    I IINSC+GL+  +
Sbjct: 70  RH-PN-LHCVEFD-------PQHAEGMST-VASFAFHPDLSSGSCRITIINSCSGLISLI 129

Query: 139 DRSNNVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKI 198
                  G      CV  LNP+TN+Y ++P+   +   G    +Y YG GFSP T QYK 
Sbjct: 130 INKRRRRGHRLDLVCV--LNPITNEYFKLPT---SRSKGDRVPNYCYGLGFSPTTNQYK- 189

Query: 199 VRLPRATMTPSAILFVADIFTFETSSYGKWTSV-TIPSIYALTRDDGIYFNGGLYWRGYH 258
             L R   T     F+ DIF F TS   +WT V ++P+   L    G+Y NGGLYW G  
Sbjct: 190 --LARTHFTHDE--FIVDIFAFGTSC--EWTPVGSVPNF--LNEYHGVYLNGGLYWVGSQ 249

Query: 259 FVVPR---FHRRRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDE 318
             +P          I R DL++EKFE+I  P         DD     + G+LY + F  E
Sbjct: 250 -KLPNGGISDYTEVIYRLDLKDEKFEKISFPL-----DGGDDPYIAVYNGTLYLT-FCCE 309

Query: 319 SCRFHVWKMEQDYSWTEEFIIPIRNRNMLIHFSIRRISKCNRFQLIKIFKDRKILCVDYT 378
              +H WKME+D+SW++EF++ +      +H S+R        QLIK  +D  ILC+ Y 
Sbjct: 310 DFDYHAWKMEEDFSWSKEFVLALPEN---VHHSLRHHPIGYYLQLIKFCEDGNILCL-YA 369

Query: 379 LDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGS 409
              LILYD  T+ +E L  N     K+ +W+++IESF+F S
Sbjct: 370 GILLILYDPSTQTVEIL-TNQDFEIKEAMWVHQIESFSFNS 374

BLAST of Clc01G25950 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.4e-48
Identity = 151/388 (38.92%), Postives = 209/388 (53.87%), Query Frame = 0

Query: 26  PSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKLHCI 85
           P +II +I SK+P+  L  CRLVCK+WNNLIL+ +FDP     FAY  P       L+C+
Sbjct: 19  PDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLSFAYDCP----SRTLYCV 78

Query: 86  DFDFDFDFDSKPFKEGKTCFVASFTFHPHFST----IEIINSCNGLLCFVDRSNNVLGGE 145
           DFD         + EG    + SFTFHP FST    I IIN+CNGLL  +  S   LG  
Sbjct: 79  DFD-------PMYFEGMNS-IGSFTFHPKFSTSDSSISIINACNGLLSLL-ISKRKLG-- 138

Query: 146 TMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMTP 205
           ++   + ILNPMTN+Y + P+ + +  +      Y YG GF+P TKQYKI    R +  P
Sbjct: 139 SVSYVLGILNPMTNEYFKFPA-EKSKSHCCCGRLYSYGLGFNPKTKQYKIA---RTSFRP 198

Query: 206 SAILFVADIFTFETSSYGKWTSV-TIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHRRR 265
                + +IFTF  S++  WT V  +PS+  +  D G+YF GGLYW   +   P      
Sbjct: 199 DESTTLVEIFTF-GSTHQVWTPVGFLPSL--VVEDHGVYFKGGLYWVA-NQPDPHDSSIS 258

Query: 266 FILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDESCRFHVWKMEQDY 325
            I R DLENEK E+I  PQ     +    F F  F G+LY +    ++ ++ VWKM+ ++
Sbjct: 259 AIYRLDLENEKLEKISCPQ-----YIGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNF 318

Query: 326 SWTEEFIIPIRNRNMLIHFSIRRISKCNRFQLIKIFKDRKILCVDYTLDYLILYDSETKE 385
           SW + F+I  R RN+       +    ++   IK  +D KILC+   L +LILYD +TK 
Sbjct: 319 SWIKAFVIS-RPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGL-HLILYDPKTKS 373

Query: 386 MEALYHNLCDTTKQILWIYEIESFNFGS 409
            E L        K  L ++ I++FNF S
Sbjct: 379 AEILTDQSVKVEKH-LHVHHIDAFNFNS 373

BLAST of Clc01G25950 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.0e-47
Identity = 146/401 (36.41%), Postives = 204/401 (50.87%), Query Frame = 0

Query: 19  MRKMLELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDP---ISKPIFAYISPP 78
           + K  ELP  I+  IFSK+P   L  CRLV + WNNLI S +FDP   I    FA     
Sbjct: 9   INKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSS 68

Query: 79  HHYPNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHF----STIEIINSCNGLLCFV 138
            H    LHC++FD        P        VASF FHP F    S I IINSC+GL+  +
Sbjct: 69  RH--RNLHCVEFD--------PQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLL 128

Query: 139 DRSNNVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKI 198
                  G      CV  LNP+TN+Y +   H      G    +Y YG GFSP T QYK+
Sbjct: 129 ITKRRRRGQRRDVVCV--LNPITNEYFK---HPNLRLKGDKVPNYCYGLGFSPKTNQYKL 188

Query: 199 VRLPRATMTPSAILFVADIFTFETSSYGKWTSV-TIPSIYALTRDDGIYFNGGLYWRGYH 258
            R   A        F+ DIF F TS   +WT + ++P+   L    G+YFNGGLYW G  
Sbjct: 189 ARTHFAHNE-----FIVDIFAFGTSC--EWTPIGSVPNF--LNEYHGVYFNGGLYWVGSQ 248

Query: 259 FVVPRFHRRRF---ILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFNDE 318
             +P      +   + R DL +EKF++I +P      F  D+     + G+LY +    E
Sbjct: 249 KQLPNGGLSDYTGVVYRLDLNDEKFKKISIP------FGGDEPYVGVYNGTLYLT-LCCE 308

Query: 319 SCRFHVWKMEQDYSWTEEFIIPIRNRNMLIHFSIRRISKCNRFQLIKIFKDRKILCVDYT 378
              +HVWKM++D+SW++EF++ +     ++H   R        QL+K  +D  ILC+   
Sbjct: 309 DFDYHVWKMKEDFSWSKEFVLALPEN--ILHSLHRHHPIGYYLQLVKFCEDGSILCLCAG 368

Query: 379 LDYLILYDSETKEMEALYHNLCDTTKQILWIYEIESFNFGS 409
           +  LI+YD +T++ME L     +  K+ +W ++IESF+F S
Sbjct: 369 I-LLIVYDPKTQQMEILTDQDFE-IKEGMWFHQIESFSFNS 374

BLAST of Clc01G25950 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 69.3 bits (168), Expect = 8.1e-12
Identity = 78/283 (27.56%), Postives = 120/283 (42.40%), Query Frame = 0

Query: 25  LPSHIIDLIFSKLPIPILAICRLVCKAWNNLI-----LSRQFDPISKP-IFAYISPPHHY 84
           LP  II  IFS+LPI  +A    VC++W +++     LS      +KP +  +   P   
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSP--I 87

Query: 85  PNKLHCIDFDFDFDFDSKPFKEGKTCFVASFT--FHPHFSTIEIINSCNGLLCFVDRSNN 144
            N LH +D            +E K      FT  F       +++ SCNGLLC  D   N
Sbjct: 88  RNGLHFLDLS----------EEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYN 147

Query: 145 VLGGETMKACVFILNPMTNQYTQVP--SHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRL 204
                     +++ NP T    ++P  S+ Y HD         +GFGF   TK+YK++++
Sbjct: 148 --------DSLYLYNPFTTNSLELPECSNKY-HD-----QELVFGFGFHEMTKEYKVLKI 207

Query: 205 P--RATMTPSAILF--------------VADIFTFETSSYGKWTSVTIPSIYALTRDDGI 264
              R + + +  ++              +  + +  T     W S+       + R    
Sbjct: 208 VYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEA 267

Query: 265 YFNGGLYWRGYHFVV-PRFH--RRRFILRFDLENEKFEEIFLP 279
             NG L     HFV  PR H   R+F+  FDLE+E+F+EI  P
Sbjct: 268 LVNGRL-----HFVTRPRRHVPDRKFV-SFDLEDEEFKEIPKP 278

BLAST of Clc01G25950 vs. TAIR 10
Match: AT1G46984.1 (F-box family protein )

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-08
Identity = 69/255 (27.06%), Postives = 106/255 (41.57%), Query Frame = 0

Query: 25  LPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKLHC 84
           LP  +I  I S+LP+  +AICRLV K W +++ S  F       F   SPP   P  L  
Sbjct: 24  LPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDF----TESFLIKSPPR--PRLLFT 83

Query: 85  IDFDFDFDFDSKPFKEG--KTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNV-LGGE 144
           I +   +   S P      +   V +  +H  FS    + S   +  F+  +N + L G+
Sbjct: 84  IRYGSKWHLFSAPQPRNFDENFPVVATDYHKGFSGNWCMQSFQLVNGFIYLNNRLSLKGK 143

Query: 145 TMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMTP 204
             +  V I NP T Q   +P      D G         FG+ P  KQ+K++ +  +    
Sbjct: 144 IDRVSV-IWNPSTGQQIPLP------DLGVKNSHSKSFFGYDPIEKQFKVLCITSSK--- 203

Query: 205 SAILFVADIFTFETSSYGKWTSVTIP-SIYALTRDDGIYFNGGLYWRGYHFVVPRFHRRR 264
                   + T  T     W  +      Y   + +GI  NG LY+R  + ++ RF  R 
Sbjct: 204 -----EHQVLTLGTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYYRNTNAMIVRFDVRS 256

Query: 265 FILRFDLENEKFEEI 276
              RF +E + + EI
Sbjct: 264 EEFRF-VEIKMYVEI 256

BLAST of Clc01G25950 vs. TAIR 10
Match: AT1G11620.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-08
Identity = 68/317 (21.45%), Postives = 121/317 (38.17%), Query Frame = 0

Query: 23  LELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKL 82
           ++L S +++ I S++P   L   R  CK W  LI   +F         Y        N  
Sbjct: 4   MDLSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVFNNE 63

Query: 83  HCID--FDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSNNVLGG 142
           H +   F     +    F + + C V    F    S    I+ C+GLL +V         
Sbjct: 64  HIVSPLFGSTTSYVGIDFNKPENCGV-KLPFPIALSPAINISHCDGLLLYV--------- 123

Query: 143 ETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNT--KQYKIVRLPRAT 202
              K+ + + NP+ +Q   +     +  +  + D+YG G+ F+ ++    YK+VR     
Sbjct: 124 --TKSMLLVANPLLSQKRWIKC---SEGFDHSMDAYGLGYLFNQSSGFYDYKVVRFRCGI 183

Query: 203 MTPSAILFVADIFTFETSSYGKWTSVTIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHR 262
              S +    +++ F++ S+             L     +   G  YW GY+      + 
Sbjct: 184 KNSSRV----EVYAFKSDSWKVVVDTNFGGFDGLPL-SSVCLRGTPYWLGYN---KSGNE 243

Query: 263 RRFILRFDLENEKFEEIFLPQIEEQDFRSDDFGFQFFTGSLYASNFN-----DESCRFHV 322
              I  FD   E+FE +FLP    Q   S +       G       +      E+C+ H+
Sbjct: 244 LMSIQSFDFSKERFEPLFLP---PQSIGSRNLVKYISLGIFRGDQLSLLLECHETCKLHL 293

Query: 323 WKMEQDYSWTEEFIIPI 331
           W M++ + W+    + +
Sbjct: 304 WVMKKQH-WSRLMTVDV 293

BLAST of Clc01G25950 vs. TAIR 10
Match: AT5G41510.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 54.3 bits (129), Expect = 2.7e-07
Identity = 70/318 (22.01%), Postives = 125/318 (39.31%), Query Frame = 0

Query: 25  LPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPI---------SKPIFAYISPP 84
           LP  +I+ IFS++P+  +   RL CK+WNNL  S  F  +          K +   +   
Sbjct: 8   LPRDLIEEIFSRVPLTSMKAVRLTCKSWNNLSKSESFTKVHIGRAATREEKTMIVDV--- 67

Query: 85  HHYPNKLHCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNGLLCFVDRSN 144
              P+KL+ +    D   D  P  E K  F      H ++   ++++    LLC +    
Sbjct: 68  --MPHKLNLMSIVID---DVTPSAEFKGQF---SLLHKNYRINQVLHYEGLLLCIMKDPT 127

Query: 145 NVLGGETMKACVFILNPMTNQYTQVPSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVR-L 204
            ++          + NP   Q   +    +   +G     Y  G+    +    K +R L
Sbjct: 128 RIV----------VWNPYLGQTRWIQLRYFHRPHGIDHFRYALGYADKESCSSLKFLRFL 187

Query: 205 PRATMTPSAILFVADIFTFETSSYGKWTSVTIPSIYAL-TRDDGIYFNGGLYWRGYHFVV 264
                 P    F  +I+ F++   G WT++ +   + + +    +   G  YW       
Sbjct: 188 DYFYKAPEEEFFWYEIYDFDS---GLWTTLNVTPHWGIYSTCPCVSLKGNTYWPAKERST 247

Query: 265 PRFHRRRFILRFDLENEKFEEIF-LPQIEEQDFRSDDFGFQFFTGSLYASNFNDES--CR 324
             F  + +I+RFD   E+F  +  LP   E  F S     +    +L+    + +S    
Sbjct: 248 QGF--QDYIIRFDFTRERFGPLLALPTDRESSFVSLSCVKEEKLAALFKHRLHHDSYEYE 299

BLAST of Clc01G25950 vs. TAIR 10
Match: AT2G27520.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-06
Identity = 65/267 (24.34%), Postives = 102/267 (38.20%), Query Frame = 0

Query: 23  LELPSHIIDLIFSKLPIPILAICRLVCKAWNNLILSRQFDPISKPIFAYISPPHHYPNKL 82
           L+LP  ++D I S+LP   L   R  CK WN L    +F          I+   H   K 
Sbjct: 4   LDLPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEF----------ITKQFHKAAKQ 63

Query: 83  HCIDFDFDFDFDSKPFKEGKTCFVASFTFHPHFSTIEIINSCNG-LLCFVDRSNNVLGGE 142
             +    +F         G      +    P+   I  +  CNG LLC  +  N      
Sbjct: 64  DLVLMLSNF---------GVYSMSTNLKEIPNNIEIAQVFHCNGLLLCSTEEGN------ 123

Query: 143 TMKACVFILNPMTNQYTQV-PSHDYAHDYGGATDSYGYGFGFSPNTKQYKIVRLPRATMT 202
             K  + ++NP T Q   + P  DY +++         G+G +   K Y   ++ R T  
Sbjct: 124 --KTKLVVVNPCTGQTRWIEPRTDYNYNH-----DIALGYGNNSTKKSYDSYKILRITYG 183

Query: 203 PSAILFVADIFTFETSSYGKWTSV--TIPSIYALTRDDGIYFNGGLYWRGYHFVVPRFHR 262
              +    +IF  +++S+   + V   +   Y      G+ F G  YW  Y     +F+ 
Sbjct: 184 CKLV----EIFELKSNSWRVLSKVHPNVEKHYY----GGVSFKGNTYWLSY----TKFN- 222

Query: 263 RRFILRFDLENEKFEEIFLPQIEEQDF 286
              IL FD   E F  + LP + +  F
Sbjct: 244 ---ILSFDFTTETFRSVPLPFLYQDGF 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN59660.13.1e-6643.57hypothetical protein Csa_001105 [Cucumis sativus][more]
KGN59658.18.6e-5638.86hypothetical protein Csa_001357 [Cucumis sativus][more]
XP_038880514.12.9e-5139.80putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.12.4e-5039.40putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
XP_004134745.11.1e-4738.92F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787... [more]
Match NameE-valueIdentityDescription
Q9SFC71.1e-1027.56F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1[more]
Q9C6273.4e-0727.06Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE... [more]
Q9SAB53.4e-0721.45Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana... [more]
Q9FFS93.8e-0622.01Putative F-box protein At5g41510 OS=Arabidopsis thaliana OX=3702 GN=At5g41510 PE... [more]
Q9ZNQ31.4e-0524.34F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A0A0LCB81.5e-6643.57F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 ... [more]
A0A0A0LCZ34.2e-5638.86F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 ... [more]
A0A0A0M1M51.2e-5039.40F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A0A0KJY95.4e-4838.92F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... [more]
A0A5D3CIX96.0e-4736.41Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
Match NameE-valueIdentityDescription
AT3G07870.18.1e-1227.56F-box and associated interaction domains-containing protein [more]
AT1G46984.12.4e-0827.06F-box family protein [more]
AT1G11620.12.4e-0821.45F-box and associated interaction domains-containing protein [more]
AT5G41510.12.7e-0722.01F-box and associated interaction domains-containing protein [more]
AT2G27520.11.0e-0624.34F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 25..65
e-value: 1.9E-6
score: 37.4
IPR001810F-box domainPFAMPF00646F-boxcoord: 21..63
e-value: 4.4E-7
score: 29.6
IPR001810F-box domainPROSITEPS50181FBOXcoord: 19..64
score: 9.232525
NoneNo IPR availableGENE3D1.20.1280.50coord: 16..62
e-value: 4.5E-7
score: 31.7
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 28..349
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 28..349
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 237..342
e-value: 1.9E-5
score: 24.6
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 122..341
e-value: 1.8E-24
score: 84.3
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 14..93
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 131..329

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G25950.1Clc01G25950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding