Clc01G25740 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G25740
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr01: 35919465 .. 35922683 (-)
RNA-Seq ExpressionClc01G25740
SyntenyClc01G25740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCCGGTGAAAAAGATGGTCTAAGGGAAGATGTGGTTTGAGTGTTGAGAAACAACATTTTTGCGGTATTCACGTCATTTCATCATGTGGAACCTATCTCTGAAATTATGAAAAGTTGAAAAATGGGTTAGAAAAAGAAATTTTAAAAAAAGAGGTTAGTTTTGTCGCATAAAAAAAATTTTGAGTTAGAAATAACAATTTCACAAACAAAATCTTACCAATGTATAAAAAATAAAGATAGTGTTTAGTTTAGGTCCTATTTGGCAACCATCTAGTTTTTGGTATTTAGTTTTTGAAAATTAAGCCTAATTCAAAAAACAAAAACAAGTTTTTAAAAGCTACTTTTTTACTTATCAAAATTTGGATTGATATTTTAAGCTATTGGTAAAAAATGACAACAAAAAAAAGAAATTTGGGGTGAAAATAGTATCTATAAGCTTAATTTTCATAAACAAAAAAAAAAATGAAATGGACTTTAGTTTTCAGGTGCTTAATATTGAAAATAAGTCAACTAGGAGGGCGGTTACTTTCAATAATACATAGAAAAACCATAAATTTACATTTTTTAAGTCAATTAGAGACAAGGGAATTCAAATATAAATCAATAATATTTGGATGTCAATTAAGCTATCATCGGTTTGACATCATAAATTTATAATATGGGAGACTACGCACTCACGTGTACAAATTTGTAGAACAGTACAAAATCAAGGAGAATAATATATTGATATCCTCGGGGCACATCTACCTCCCTAGCCACGTGAGCATCAAGGAAGTTGAGTTTGGGGTTTACTGATGTTTCATCTTTCATCTTCTACGTTCTTTAAGGACTCTTGGTTTTTTCCCCTAATTTGGTTTATCAGGAAATCAAGAAAGAGTTCGCGATTCTCGCTTCTTGAAAATTGTCTGTCTCTGTCTCTGTCTTTTCTTTTCTTGAAACCGAGAGCATGCATGGTTTATGAATTTTGGTTATTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTAGAGACTTGGGCTTTTAGATTTCATGCTGCCCTAATAATTTTCATTGGCTGGACTGGTAATTCGTTTTATCTTGAGATCTCTTTTGCTGGGACATGCATTCTTTTATAGTGCTTATTTCCCAGTTTTTGTTCAATATCTGTTTTTGTTCTAAAAAGTCATTTGCGTGGTTATTTACTTTTGTTTGTACAGGTTAAAGGCTTCACAGTGCACTTGTGGTTGGTTGTCCATGGAGCTTTAAGTCATCCCATTGGTACGGCCCTCATTAGAGATGTGAAGGCAATCCTTTGACAATTTTTTGTGTTTGTAAGGACTATTAATATTCTGTAATCATCTTGTATATTTGTGGAACTTAAAATATTCTATTTTGTTTACAGCTTTCAAATCTAGACCATGTGAAAAGAATGCTCGTGAAGTTAAAAATGGAGGAATGGTACCTATGTAGATCCAGTAAAACAACTGGAGATTTTACTGAACAAATCTGCTGGAAGACAACAGACACTGAGCCATCGGGGCTGCATGGTAGAGTCCATCATGAAGATATACTAAGTCAAACCATAACCTTGAAGATGAAGAAGGATGATAAGTTGAAAAGTGAAAATAATGCTACAGCAAAGAACTTGGATGAAGAGATGTTTGTAGACTGTATTGAGAAGATTGGCCATCATATCTCCTTAGTTGAATAACAAAATCTAGTGCAATGGATTTTTCATATTAACTGGGGAATGCAAAAGCTCGATGAATTCTTTCGGACACTTCTTAATATGAAAAATGAACTGAAAGTGTACATGAAGGATGATGAGTATAACTCTAAGATCCAGGTGTTCATCTATGAACTACTCCACATTTTCAATAAAATGAACCATACTTCGATGATTTGGGAGAAGGAATTGATTATCATGTGTACACAACAAATCTCATTCATAATTTTACCTCGCGATCACTAAAGCAAAAGGCTATAGAACTTTGTGATTTTTGTATTCTATTTGACTTCGAATGTAACCTCTTAAATAATGAAAACTTTAAATTTTGATAATTTGTGCTTCACACTTAAACAAGTATTACTATATTAACCTTATATAAAATCAACTGGCAAGTTTTTGTTTAGAAAAATGTTTTTTTCTCTAGTTAATGAACTGTATAAAATCAATAGAATTTCAAATAAAACCGACAATTGAACAAATTTTGTTTGTCAAAATTGGTAAACTTATTGATTTCTACATCAATTAAACTAAAACTTGTGCATCTATTTATATTATTGAAATTAGTAAATTTTTAAAGTTTTTTTGCCTTCCTTTATTTATTTGTGTAAAATTAATGAATATTCATATTAAAGTCTAAAATCTCTCCCATAGGAGCAAACTCATTCCCACATTCGTTAGCCGCAAAGCAGGAAACGACAGAGACTTACCGATTGGTCACTTTTTAAGGTATCTACCTGCCAAGCCCCCCCTTGACGTTTTCTTTCTTTAAGCGCTCCTTAGGTGATAAGATCTACCTATCATTTAAGTTGAGCTTTTCTAACCGCTGAGATCTGAGGGTGGGCACAGAATCAGCCGAGAAGGTGCTAGTCTATCTCCTCGTTTGGGATTCAAAAAGGTCTTCTTGGTTAGTGGTCCTCTCACGTAAATTGCTTTGAATGGGTAAATCAATCATTTGTCCTTGTGGATCTGACATTAATCCTCTCATACTTTCGAGTGTAAGACCTAGCCTTGTGAGTCAAAATAGAAAACAACTTCTTTTTCGGGAAGCGCTAGTGAAAATGAAGGAAGAAAGACTTGGAAGTATCGAATGATTACTTTGTTTGCATCACAATGATCATCAAAATTCATTGGAAATCCCATATCGCTAATAGCTTGATGAAACTTAAGGTACCACTGTGGGGGCTCTAGGGCTTAGAAAGCGTGAGCAAGTTCTCTTCTCTCGCTCTCAGACTGCTCGAGAAAACTCGATTATCTCTTGATGCCCTTTCATTCTGACTTTTTTTAGCGAGTGCCAAGCTAATCGGTCGAAATACGGGAAAACTCCACTCAATTCTCGATGGAAATGGAGTTTTGCGAATTCTCCCCAGAATTGGAAGATCTTTGCTGAAGATTCTGATATCTCTGGGGTTATTATTGATGGACGAATTATCACGGATTTGAGAACCTTTAAGAAAATTCTAGAAGATAAAGTCACTCTATGTTGCCTCTTAGGTGTTTACTAG

mRNA sequence

ATGGACTCCGGTGAAAAAGATGGTCTAAGGGAAGATGTGGTTAAAGGCTTCACAGTGCACTTGTGGTTGGTTGTCCATGGAGCTTTAAGTCATCCCATTGGTACGGCCCTCATTAGAGATCTTTCAAATCTAGACCATGTGAAAAGAATGCTCGTGAAGTTAAAAATGGAGGAATGGTACCTATGTAGATCCAGTAAAACAACTGGAGATTTTACTGAACAAATCTGCTGGAAGACAACAGACACTGAGCCATCGGGGCTGCATGGTAGAGTCCATCATGAAGATATACTAAGTCAAACCATAACCTTGAAGATGAAGAAGGATGATAAGTTGAAAAGTGAAAATAATGCTACAGCAAAGAACTTGGATGAAGAGATGAGCAAACTCATTCCCACATTCGTTAGCCGCAAAGCAGGAAACGACAGAGACTTACCGATTGGTCACTTTTTAAGCGAGTGCCAAGCTAATCGGTCGAAATACGGGAAAACTCCACTCAATTCTCGATGGAAATGGAGTTTTGCGAATTCTCCCCAGAATTGGAAGATCTTTGCTGAAGATTCTGATATCTCTGGGGTTATTATTGATGGACGAATTATCACGGATTTGAGAACCTTTAAGAAAATTCTAGAAGATAAAGTCACTCTATGTTGCCTCTTAGGTGTTTACTAG

Coding sequence (CDS)

ATGGACTCCGGTGAAAAAGATGGTCTAAGGGAAGATGTGGTTAAAGGCTTCACAGTGCACTTGTGGTTGGTTGTCCATGGAGCTTTAAGTCATCCCATTGGTACGGCCCTCATTAGAGATCTTTCAAATCTAGACCATGTGAAAAGAATGCTCGTGAAGTTAAAAATGGAGGAATGGTACCTATGTAGATCCAGTAAAACAACTGGAGATTTTACTGAACAAATCTGCTGGAAGACAACAGACACTGAGCCATCGGGGCTGCATGGTAGAGTCCATCATGAAGATATACTAAGTCAAACCATAACCTTGAAGATGAAGAAGGATGATAAGTTGAAAAGTGAAAATAATGCTACAGCAAAGAACTTGGATGAAGAGATGAGCAAACTCATTCCCACATTCGTTAGCCGCAAAGCAGGAAACGACAGAGACTTACCGATTGGTCACTTTTTAAGCGAGTGCCAAGCTAATCGGTCGAAATACGGGAAAACTCCACTCAATTCTCGATGGAAATGGAGTTTTGCGAATTCTCCCCAGAATTGGAAGATCTTTGCTGAAGATTCTGATATCTCTGGGGTTATTATTGATGGACGAATTATCACGGATTTGAGAACCTTTAAGAAAATTCTAGAAGATAAAGTCACTCTATGTTGCCTCTTAGGTGTTTACTAG

Protein sequence

MDSGEKDGLREDVVKGFTVHLWLVVHGALSHPIGTALIRDLSNLDHVKRMLVKLKMEEWYLCRSSKTTGDFTEQICWKTTDTEPSGLHGRVHHEDILSQTITLKMKKDDKLKSENNATAKNLDEEMSKLIPTFVSRKAGNDRDLPIGHFLSECQANRSKYGKTPLNSRWKWSFANSPQNWKIFAEDSDISGVIIDGRIITDLRTFKKILEDKVTLCCLLGVY
Homology
The following BLAST results are available for this feature:
BLAST of Clc01G25740 vs.
Match NameE-valueIdentityDescription
BLAST of Clc01G25740 vs.
Match NameE-valueIdentityDescription
BLAST of Clc01G25740 vs.
Match NameE-valueIdentityDescription
BLAST of Clc01G25740 vs.
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G25740.2Clc01G25740.2mRNA