Clc01G25405 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G25405
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Glutaredoxin domain-containing protein
Location	ClcChr01: 35648614 .. 35648964 (+)
RNA-Seq Expression	Clc01G25405
Synteny	Clc01G25405

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGAATTAGACAACCACCGGCCGTTCGAGGTGGTCCGGCAGCTGGCGGAGTGCAATGCGGTGGTTGTTTTCAGCATCAGCGGCTGCTGCATGTGCACCGTCGTCAAGCGTCTCCTCTTCGGCCTTGGCGTCGGTCCCACCGTCGTCGAGCTTGACCATCTTTCCCATTCTTCCGCCGACGATATACAAGCCGTTCTCCACCACCTCCTCCCCCATCAGCCTCAACCCATTCCCGCCGTCTTCGTTGGCGGCAAGTTCCTTGGTGGCCTCGAAACTCTCATGTCGTCCCACATCAATGGCTCCCTCGTCCCTCTCCTCAAACAAGCCGGCGCTCTCTGGCTCTAG

mRNA sequence

ATGGAAATGGAATTAGACAACCACCGGCCGTTCGAGGTGGTCCGGCAGCTGGCGGAGTGCAATGCGGTGGTTGTTTTCAGCATCAGCGGCTGCTGCATGTGCACCGTCGTCAAGCGTCTCCTCTTCGGCCTTGGCGTCGGTCCCACCGTCGTCGAGCTTGACCATCTTTCCCATTCTTCCGCCGACGATATACAAGCCGTTCTCCACCACCTCCTCCCCCATCAGCCTCAACCCATTCCCGCCGTCTTCGTTGGCGGCAAGTTCCTTGGTGGCCTCGAAACTCTCATGTCGTCCCACATCAATGGCTCCCTCGTCCCTCTCCTCAAACAAGCCGGCGCTCTCTGGCTCTAG

Coding sequence (CDS)

ATGGAAATGGAATTAGACAACCACCGGCCGTTCGAGGTGGTCCGGCAGCTGGCGGAGTGCAATGCGGTGGTTGTTTTCAGCATCAGCGGCTGCTGCATGTGCACCGTCGTCAAGCGTCTCCTCTTCGGCCTTGGCGTCGGTCCCACCGTCGTCGAGCTTGACCATCTTTCCCATTCTTCCGCCGACGATATACAAGCCGTTCTCCACCACCTCCTCCCCCATCAGCCTCAACCCATTCCCGCCGTCTTCGTTGGCGGCAAGTTCCTTGGTGGCCTCGAAACTCTCATGTCGTCCCACATCAATGGCTCCCTCGTCCCTCTCCTCAAACAAGCCGGCGCTCTCTGGCTCTAG

Protein sequence

MEMELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL

Homology

[Close]

BLAST of Clc01G25405 vs. NCBI nr
Match: KAE8647751.1 (hypothetical protein Csa_003767 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 5.9e-55
Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 7   NHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQA 66
           NHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSH SADDIQA
Sbjct: 171 NHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPSADDIQA 230

Query: 67  VLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           VLHHLLPHQP PIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL
Sbjct: 231 VLHHLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 280

[Close]

BLAST of Clc01G25405 vs. NCBI nr
Match: XP_022925986.1 (glutaredoxin-C9-like [Cucurbita moschata] >XP_023543935.1 glutaredoxin-C9-like [Cucurbita pepo subsp. pepo] >KAG6581443.1 Glutaredoxin-C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034736.1 Glutaredoxin-C1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MEMELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSS 60
           MEMEL N  P+EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSH S
Sbjct: 1   MEMELAN--PYEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPS 60

Query: 61  ADDIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           ADDIQAVLHHLLPHQP PIPAVFVGGKFLGGL+TLMSSHINGSLVPLLKQAGALWL
Sbjct: 61  ADDIQAVLHHLLPHQPHPIPAVFVGGKFLGGLDTLMSSHINGSLVPLLKQAGALWL 114

[Close]

BLAST of Clc01G25405 vs. NCBI nr
Match: XP_021295056.1 (glutaredoxin-C9-like [Herrania umbratica])

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-38
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 3   MELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSAD 62
           M+LDN  P+E+VRQLA  NAVV+FS+SGCCMCTV KRLLFGLGVGPT++ELDH  H S  
Sbjct: 15  MKLDN--PYEIVRQLASTNAVVLFSMSGCCMCTVAKRLLFGLGVGPTIIELDH--HVSGP 74

Query: 63  DIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           DIQAVL  L     QP+PAVFVGGKFLGG+ETLM+ HING+LVPLLK+AGALWL
Sbjct: 75  DIQAVLFQLAADGRQPVPAVFVGGKFLGGIETLMACHINGTLVPLLKEAGALWL 124

[Close]

BLAST of Clc01G25405 vs. NCBI nr
Match: XP_007025024.2 (PREDICTED: glutaredoxin-C9 isoform X2 [Theobroma cacao])

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-38
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 3   MELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSAD 62
           M+LDN  P+E+VRQLA  NAVV+FS+SGCCMCTV KRLLFGLGVGPT++ELDH  H S  
Sbjct: 15  MKLDN--PYEIVRQLASTNAVVLFSMSGCCMCTVAKRLLFGLGVGPTIIELDH--HVSGP 74

Query: 63  DIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           DIQAVL  L     QP+PAVFVGGKFLGG+ETLM+ HING+LVPLLK+AGALWL
Sbjct: 75  DIQAVLFQLAADGRQPVPAVFVGGKFLGGIETLMACHINGTLVPLLKEAGALWL 124

[Close]

BLAST of Clc01G25405 vs. NCBI nr
Match: XP_017978494.1 (PREDICTED: glutaredoxin-C9 isoform X1 [Theobroma cacao])

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-38
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 3   MELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSAD 62
           M+LDN  P+E+VRQLA  NAVV+FS+SGCCMCTV KRLLFGLGVGPT++ELDH  H S  
Sbjct: 25  MKLDN--PYEIVRQLASTNAVVLFSMSGCCMCTVAKRLLFGLGVGPTIIELDH--HVSGP 84

Query: 63  DIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           DIQAVL  L     QP+PAVFVGGKFLGG+ETLM+ HING+LVPLLK+AGALWL
Sbjct: 85  DIQAVLFQLAADGRQPVPAVFVGGKFLGGIETLMACHINGTLVPLLKEAGALWL 134

[Close]

BLAST of Clc01G25405 vs. ExPASy Swiss-Prot
Match: Q7XIZ1 (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-32
Identity = 71/106 (66.98%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 11  FEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHH 70
           +E V ++A  NAVVVFS SGCCMC VVKRLL GLGVGP V ELD L  ++A DIQA L  
Sbjct: 89  YERVARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELDQL--AAAADIQAALSQ 148

Query: 71  LLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           LLP    P+P VFVGG+ LGG+E +M+ HING+LVPLLKQAGALWL
Sbjct: 149 LLPPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGALWL 192

[Close]

BLAST of Clc01G25405 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22
Identity = 57/107 (53.27%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 14  VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLL- 73
           +  LA  +AVV+FS+S CCMC  VK L  G+GV P V ELD   H    DIQ  L  LL 
Sbjct: 32  IESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELD--LHPYGGDIQRALIRLLG 91

Query: 74  ---PHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
                 P  +P VF+GGK +G ++ +M+SHINGSLVPLLK AGALWL
Sbjct: 92  CSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of Clc01G25405 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-22
Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 14  VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLLP 73
           V +LA  +AVVVFS+S CCMC  VKRL  G+GV PTV ELD        +++  L  L+ 
Sbjct: 29  VERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELD--LDPRGRELERALARLVG 88

Query: 74  H------QPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           +       P  +P VF+GGK +G ++ +M++HINGSLVPLLK+AGALWL
Sbjct: 89  YGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of Clc01G25405 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-22
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 14  VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLL- 73
           +  +A  NAVV+FS+S CCMC  +KRL  G+GV P V ELD L +    +I   L  LL 
Sbjct: 34  IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGV--EIHRALLRLLG 93

Query: 74  -----PHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
                   P  +P VF+GGK +G +E +M+SHINGSLVPLLK AGALWL
Sbjct: 94  CSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Clc01G25405 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-21
Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 12  EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHL 71
           E V +LA  +AVVVFS+S CCMC  VKRL  G+GV P V ELD        D++  L  L
Sbjct: 30  ERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELD--LDPRGRDLERALARL 89

Query: 72  L---PHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           +         +P VF+GGK +G ++ +M++HINGSLVPLLK+AGALWL
Sbjct: 90  VGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of Clc01G25405 vs. ExPASy TrEMBL
Match: A0A0A0KI63 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G524040 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MEMELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSS 60
           MEMEL NHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSH S
Sbjct: 1   MEMELANHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPS 60

Query: 61  ADDIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           ADDIQAVLHHLLPHQP PIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL
Sbjct: 61  ADDIQAVLHHLLPHQPHPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 116

[Close]

BLAST of Clc01G25405 vs. ExPASy TrEMBL
Match: A0A6J1EDM5 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111433239 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.4e-54
Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MEMELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSS 60
           MEMEL N  P+EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSH S
Sbjct: 1   MEMELAN--PYEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHPS 60

Query: 61  ADDIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           ADDIQAVLHHLLPHQP PIPAVFVGGKFLGGL+TLMSSHINGSLVPLLKQAGALWL
Sbjct: 61  ADDIQAVLHHLLPHQPHPIPAVFVGGKFLGGLDTLMSSHINGSLVPLLKQAGALWL 114

[Close]

BLAST of Clc01G25405 vs. ExPASy TrEMBL
Match: A0A2N9GT16 (Glutaredoxin domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30382 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.9e-39
Identity = 83/115 (72.17%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 2   EMELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSA 61
           EM+  N+ P+E VR LA CNAVVVFS+SGCCMCTV KRLLFGLGVGPTV+ELD   HS+ 
Sbjct: 22  EMKKLNNSPYETVRHLAACNAVVVFSMSGCCMCTVAKRLLFGLGVGPTVIELD--EHSAG 81

Query: 62  DDIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
            DIQAVL+ L     QP+PA+F+GGKFLGG+ETLM+ HINGSLVPLLK AGALWL
Sbjct: 82  HDIQAVLYDLCSDGQQPMPAIFIGGKFLGGIETLMAFHINGSLVPLLKDAGALWL 134

[Close]

BLAST of Clc01G25405 vs. ExPASy TrEMBL
Match: A0A6J1B765 (glutaredoxin-C9-like OS=Herrania umbratica OX=108875 GN=LOC110424726 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.4e-39
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 3   MELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSAD 62
           M+LDN  P+E+VRQLA  NAVV+FS+SGCCMCTV KRLLFGLGVGPT++ELDH  H S  
Sbjct: 15  MKLDN--PYEIVRQLASTNAVVLFSMSGCCMCTVAKRLLFGLGVGPTIIELDH--HVSGP 74

Query: 63  DIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           DIQAVL  L     QP+PAVFVGGKFLGG+ETLM+ HING+LVPLLK+AGALWL
Sbjct: 75  DIQAVLFQLAADGRQPVPAVFVGGKFLGGIETLMACHINGTLVPLLKEAGALWL 124

[Close]

BLAST of Clc01G25405 vs. ExPASy TrEMBL
Match: A0A6P5X8S0 (glutaredoxin-C9-like OS=Durio zibethinus OX=66656 GN=LOC111281349 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 83/114 (72.81%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 3   MELDNHRPFEVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSAD 62
           M+LDN  P+E+VRQLA  NAVV+FS+SGCCMCTV KRLLFGLGVGPT++ELDH  H +  
Sbjct: 25  MKLDN--PYEIVRQLAATNAVVLFSMSGCCMCTVAKRLLFGLGVGPTIIELDH--HVAGP 84

Query: 63  DIQAVLHHLLPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
           DIQAVL  L  +  QP+PAVFVGGKFLGG+ETLM+ HING+LVPLLK+AGALWL
Sbjct: 85  DIQAVLFQLAANGRQPVPAVFVGGKFLGGIETLMACHINGTLVPLLKEAGALWL 134

[Close]

BLAST of Clc01G25405 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 9.9e-24
Identity = 57/107 (53.27%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 14  VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLL- 73
           +  LA  +AVV+FS+S CCMC  VK L  G+GV P V ELD   H    DIQ  L  LL 
Sbjct: 32  IESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELD--LHPYGGDIQRALIRLLG 91

Query: 74  ---PHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
                 P  +P VF+GGK +G ++ +M+SHINGSLVPLLK AGALWL
Sbjct: 92  CSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of Clc01G25405 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 14  VRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLL- 73
           +  +A  NAVV+FS+S CCMC  +KRL  G+GV P V ELD L +    +I   L  LL 
Sbjct: 34  IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGV--EIHRALLRLLG 93

Query: 74  -----PHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
                   P  +P VF+GGK +G +E +M+SHINGSLVPLLK AGALWL
Sbjct: 94  CSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Clc01G25405 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 12  EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHL 71
           E VR + E NAV+V    GCCMC VV+RLL GLGV P V+E+D       D++ + L ++
Sbjct: 33  ERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEID---EEREDEVLSELENI 92

Query: 72  LPH---QPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
                     +PAV+VGG+  GGL+ +M++HI+G LVP+LK+ GALWL
Sbjct: 93  GVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Clc01G25405 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 21  NAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHLLPHQPQPIP 80
           NAVVVF+  GCC+  V KRLL   GV P VVE+    +++ D+I +          + +P
Sbjct: 63  NAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVS--------DKEKLP 122

Query: 81  AVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
            +++GGK  GGLE LM++HING LVP L+QAGALWL
Sbjct: 123 MMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Clc01G25405 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-19
Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 12  EVVRQLAECNAVVVFSISGCCMCTVVKRLLFGLGVGPTVVELDHLSHSSADDIQAVLHHL 71
           +VV +LA   AVV+FS S CCM   +KRL +  GV P +VE+D   +    DI+  L  L
Sbjct: 2   DVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGK--DIEWALARL 61

Query: 72  LPHQPQPIPAVFVGGKFLGGLETLMSSHINGSLVPLLKQAGALWL 117
                  +PAVFVGGKF+G   T+M+ H+NGSL  LLK+AGALWL
Sbjct: 62  --GCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

The following BLAST results are available for this feature:

BLAST of Clc01G25405 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647751.1	5.9e-55	98.18	hypothetical protein Csa_003767 [Cucumis sativus]	[more]
XP_022925986.1	1.1e-53	93.97	glutaredoxin-C9-like [Cucurbita moschata] >XP_023543935.1 glutaredoxin-C9-like [...	[more]
XP_021295056.1	1.7e-38	73.68	glutaredoxin-C9-like [Herrania umbratica]	[more]
XP_007025024.2	1.7e-38	73.68	PREDICTED: glutaredoxin-C9 isoform X2 [Theobroma cacao]	[more]
XP_017978494.1	1.7e-38	73.68	PREDICTED: glutaredoxin-C9 isoform X1 [Theobroma cacao]	[more]

BLAST of Clc01G25405 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XIZ1	3.3e-32	66.98	Glutaredoxin-C9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC9 PE=3 SV=1	[more]
Q96305	1.4e-22	53.27	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]
Q6K609	4.0e-22	50.46	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q8LF89	4.0e-22	51.38	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q0JDM4	3.4e-21	50.93	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]

BLAST of Clc01G25405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI63	1.1e-57	97.41	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G52404...	[more]
A0A6J1EDM5	5.4e-54	93.97	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111433239 PE=3 SV=1	[more]
A0A2N9GT16	4.9e-39	72.17	Glutaredoxin domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3...	[more]
A0A6J1B765	8.4e-39	73.68	glutaredoxin-C9-like OS=Herrania umbratica OX=108875 GN=LOC110424726 PE=3 SV=1	[more]
A0A6P5X8S0	1.4e-38	72.81	glutaredoxin-C9-like OS=Durio zibethinus OX=66656 GN=LOC111281349 PE=3 SV=1	[more]

BLAST of Clc01G25405 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02000.1	9.9e-24	53.27	Thioredoxin superfamily protein	[more]
AT5G14070.1	2.9e-23	51.38	Thioredoxin superfamily protein	[more]
AT1G28480.1	2.1e-21	47.22	Thioredoxin superfamily protein	[more]
AT1G03850.2	1.5e-19	48.96	Glutaredoxin family protein	[more]
AT3G21460.1	2.5e-19	49.52	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 4..115 e-value: 7.1E-26 score: 92.1
None	No IPR available	PANTHER	PTHR10168:SF222	GLUTAREDOXIN-C9	coord: 6..116
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 11..115 score: 20.443327
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 22..107 e-value: 1.74078E-28 score: 97.2251
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 23..88 e-value: 9.5E-9 score: 35.4
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 14..116 e-value: 1.4E-35 score: 119.2
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 6..116
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 11..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G25405.1	Clc01G25405.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity