Clc01G22960 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G22960
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	B-box type zinc finger family protein
Location	ClcChr01: 33897869 .. 33898805 (+)
RNA-Seq Expression	Clc01G22960
Synteny	Clc01G22960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAAAAACCCAGAAATGTTCGCCCACAGGAATGGGATTCATTGATTGTAGCCACAAAATTATCTAAAACACCCACTTGCCCCAAAAATGACCATAACAAGCACCGTACACTAAACCAAAAAAGACAGAAAACAAAATCCCCATTACCCCCTTTCCATGATATTTCTTCGTCCAAATACAGAGAAAAAATAGGAACCCAAGTCCCAACTTGATTCCCTTACATCTCTGCATAATATGGGCCACCCTTCATTGCTTTGCTTCTCTCTGTTTGTATAAATAAATAAGTGATGAGAGTGAGGGGTAACTAAAATGAAGAAATTGTGCGAGCTGTGCGAGTGTGTGGCTACGGTGATGTGCGAATCGGACGCAGCCAGGTTGTGTTGGGGGTGCGATTCCAAGGTCCATGGCGCTAATTTTCTAGTGGGGAAGCATTTGAGGGCTTTGCTGTGCCATGATTGCCAAGCCCCCACGCCTTGGAATGGGACTGGGCCGAAGCTCGTGGCTACGGTTGCGTTTTGCGAGAACTGTGTCGAGAAAAATAGGCGAAATGGGAAGACGACGCTGAGCAGAGGGAGTGAGGAAGGGTGTGGGAGCGAGGAAGGGTGTGGGAGCTCTAATGGCGCCACTGATGAAGATGATGATATGGAAAATCAAGTGGTTCCTTGGTTATCCTCCTGCCCTAATTGAAAATGGAAAATCCTTCACTATAATTTAAATCCCCCATGTAAATTCATAATTATTTTAATATACTTTTTTATGTCTAATGATGTAAATTATTTAGTATTGTGTATTGAGTACAATTGAACGAATGTAATATGCAAATTTTTTTAACTTTACATGTCAATTACCTGTTCATTGATTTTATTATTATTGTTGGGATTTTGTGTATTGATTCAAATTTTTACCTTATCTAGAGGTCGTTATGTATATACAT

mRNA sequence

AAAGAAAAAAACCCAGAAATGTTCGCCCACAGGAATGGGATTCATTGATTGTAGCCACAAAATTATCTAAAACACCCACTTGCCCCAAAAATGACCATAACAAGCACCGTACACTAAACCAAAAAAGACAGAAAACAAAATCCCCATTACCCCCTTTCCATGATATTTCTTCGTCCAAATACAGAGAAAAAATAGGAACCCAAGTCCCAACTTGATTCCCTTACATCTCTGCATAATATGGGCCACCCTTCATTGCTTTGCTTCTCTCTGTTTGTATAAATAAATAAGTGATGAGAGTGAGGGGTAACTAAAATGAAGAAATTGTGCGAGCTGTGCGAGTGTGTGGCTACGGTGATGTGCGAATCGGACGCAGCCAGGTTGTGTTGGGGGTGCGATTCCAAGGTCCATGGCGCTAATTTTCTAGTGGGGAAGCATTTGAGGGCTTTGCTGTGCCATGATTGCCAAGCCCCCACGCCTTGGAATGGGACTGGGCCGAAGCTCGTGGCTACGGTTGCGTTTTGCGAGAACTGTGTCGAGAAAAATAGGCGAAATGGGAAGACGACGCTGAGCAGAGGGAGTGAGGAAGGGTGTGGGAGCGAGGAAGGGTGTGGGAGCTCTAATGGCGCCACTGATGAAGATGATGATATGGAAAATCAAGTGGTTCCTTGGTTATCCTCCTGCCCTAATTGAAAATGGAAAATCCTTCACTATAATTTAAATCCCCCATGTAAATTCATAATTATTTTAATATACTTTTTTATGTCTAATGATGTAAATTATTTAGTATTGTGTATTGAGTACAATTGAACGAATGTAATATGCAAATTTTTTTAACTTTACATGTCAATTACCTGTTCATTGATTTTATTATTATTGTTGGGATTTTGTGTATTGATTCAAATTTTTACCTTATCTAGAGGTCGTTATGTATATACAT

Coding sequence (CDS)

ATGAAGAAATTGTGCGAGCTGTGCGAGTGTGTGGCTACGGTGATGTGCGAATCGGACGCAGCCAGGTTGTGTTGGGGGTGCGATTCCAAGGTCCATGGCGCTAATTTTCTAGTGGGGAAGCATTTGAGGGCTTTGCTGTGCCATGATTGCCAAGCCCCCACGCCTTGGAATGGGACTGGGCCGAAGCTCGTGGCTACGGTTGCGTTTTGCGAGAACTGTGTCGAGAAAAATAGGCGAAATGGGAAGACGACGCTGAGCAGAGGGAGTGAGGAAGGGTGTGGGAGCGAGGAAGGGTGTGGGAGCTCTAATGGCGCCACTGATGAAGATGATGATATGGAAAATCAAGTGGTTCCTTGGTTATCCTCCTGCCCTAATTGA

Protein sequence

MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTGPKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSNGATDEDDDMENQVVPWLSSCPN

Homology

[Close]

BLAST of Clc01G22960 vs. NCBI nr
Match: XP_022950367.1 (putative zinc finger protein At1g68190 [Cucurbita moschata])

HSP 1 Score: 210.7 bits (535), Expect = 7.3e-51
Identity = 100/125 (80.00%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC+CVATV+CESD ARLCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSN----GATDEDDDMENQV 120
           PKLVATVAFC+NCVEKNRRNGKT   RG     G EEG GSSN    G +D DD+ ENQV
Sbjct: 61  PKLVATVAFCQNCVEKNRRNGKTAQRRGRRR-VGEEEGRGSSNGGSGGGSDSDDEKENQV 120

Query: 121 VPWLS 122
           VPWLS
Sbjct: 121 VPWLS 124

[Close]

BLAST of Clc01G22960 vs. NCBI nr
Match: KAG6603735.1 (B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.6 bits (527), Expect = 6.2e-50
Identity = 98/125 (78.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC+CVATV+CESD ARLCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSN----GATDEDDDMENQV 120
           P+LVATVAFC++CVEKNRRNGKT   RG     G EEG GSSN    G +D DD+ ENQV
Sbjct: 61  PRLVATVAFCQSCVEKNRRNGKTAQRRGRRR-VGEEEGRGSSNGGSGGGSDSDDEKENQV 120

Query: 121 VPWLS 122
           VPWLS
Sbjct: 121 VPWLS 124

[Close]

BLAST of Clc01G22960 vs. NCBI nr
Match: XP_022977340.1 (zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49
Identity = 97/125 (77.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC+CVATV+CESD ARLCWGCDSKVHGANFLVGKH R LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCDCVATVICESDEARLCWGCDSKVHGANFLVGKHWRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSN----GATDEDDDMENQV 120
           P+LVATVAFC+NCVEKNRRNGKT   RG     G EEG GSSN    G +D DD+ E+QV
Sbjct: 61  PRLVATVAFCQNCVEKNRRNGKTAQRRGRRR-VGEEEGRGSSNGGSGGGSDSDDEKEHQV 120

Query: 121 VPWLS 122
           VPWLS
Sbjct: 121 VPWLS 124

[Close]

BLAST of Clc01G22960 vs. NCBI nr
Match: XP_023544021.1 (zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 5.2e-49
Identity = 97/125 (77.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC+CVATV+CESD ARLCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSN----GATDEDDDMENQV 120
           P+LVATVAFC+NCVEKNRR+GKT   R      G EEG GSSN    G +D DD+ ENQV
Sbjct: 61  PRLVATVAFCQNCVEKNRRHGKTA-QRRERRRVGEEEGRGSSNGGYGGGSDSDDEKENQV 120

Query: 121 VPWLS 122
           VPWLS
Sbjct: 121 VPWLS 124

[Close]

BLAST of Clc01G22960 vs. NCBI nr
Match: TYK13089.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.3e-44
Identity = 91/130 (70.00%), Postives = 99/130 (76.15%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC CVATVMCE+DAA LCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSNGATDEDDD-----MENQ 120
           P LVATVAFC NCV K R N      R  E+ CGS  G  + +G  D+DDD     +ENQ
Sbjct: 61  PNLVATVAFCHNCVHKKRLNN----GRRCEKACGSSNGGTAPSGCDDDDDDDDDDEIENQ 120

Query: 121 VVPWLSSCPN 126
           VVPWLS  P+
Sbjct: 121 VVPWLSLSPS 126

[Close]

BLAST of Clc01G22960 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-09
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 5  CELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPT 55
          CELC+  A+V CE+D+A LC  CD  VHGANFL  +H+R +LC  CQ  T
Sbjct: 31 CELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]

BLAST of Clc01G22960 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08
Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 1  MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
          M   CELC   A + C +D+A LC  CD+K H +NFL  +H R ++C +C++ T    +G
Sbjct: 1  MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

Query: 61 PKL 64
          P L
Sbjct: 61 PLL 63

[Close]

BLAST of Clc01G22960 vs. ExPASy Swiss-Prot
Match: Q9C9F4 (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 1  MKKLCELCECV-ATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQ 52
          M+++CE C+   A V C +D A LC  CD+KVH AN L G+HLR +LC  C+
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCK 61

[Close]

BLAST of Clc01G22960 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-08
Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 5  CELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPT 55
          CELC   ATV CE+DAA LC  CD  VH ANFL  +HLR ++C  C+  T
Sbjct: 32 CELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of Clc01G22960 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06
Identity = 46/141 (32.62%), Postives = 62/141 (43.97%), Query Frame = 0


Query: 1   MKKLCELCECV-ATVMCESDAARLCWGCDSKVHGANFLVGKHLRALL---------CHDC 60
           MK  C +CE   ATV+C +D A LCW CD K+H AN L GKH R  L         C  C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QAPTPWNGTGPKLVATVAFCENC------VEKNRRNGKTTLSRGSEEGCGS-EEGCGSSN 120
           Q     +G    L      C  C      V  +    +  L  G + G  S + G  + +
Sbjct: 61  QEA---SGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS 120

Query: 121 GATDEDDDMENQVVPWLSSCP 125
             T++D  ME +  P++ S P
Sbjct: 121 SPTNDDKTMETK--PFVQSIP 136

[Close]

BLAST of Clc01G22960 vs. ExPASy TrEMBL
Match: A0A6J1GEL4 (putative zinc finger protein At1g68190 OS=Cucurbita moschata OX=3662 GN=LOC111453480 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 100/125 (80.00%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC+CVATV+CESD ARLCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSN----GATDEDDDMENQV 120
           PKLVATVAFC+NCVEKNRRNGKT   RG     G EEG GSSN    G +D DD+ ENQV
Sbjct: 61  PKLVATVAFCQNCVEKNRRNGKTAQRRGRRR-VGEEEGRGSSNGGSGGGSDSDDEKENQV 120

Query: 121 VPWLS 122
           VPWLS
Sbjct: 121 VPWLS 124

[Close]

BLAST of Clc01G22960 vs. ExPASy TrEMBL
Match: A0A6J1IM17 (zinc finger protein CONSTANS-LIKE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111477691 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 97/125 (77.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC+CVATV+CESD ARLCWGCDSKVHGANFLVGKH R LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCDCVATVICESDEARLCWGCDSKVHGANFLVGKHWRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSN----GATDEDDDMENQV 120
           P+LVATVAFC+NCVEKNRRNGKT   RG     G EEG GSSN    G +D DD+ E+QV
Sbjct: 61  PRLVATVAFCQNCVEKNRRNGKTAQRRGRRR-VGEEEGRGSSNGGSGGGSDSDDEKEHQV 120

Query: 121 VPWLS 122
           VPWLS
Sbjct: 121 VPWLS 124

[Close]

BLAST of Clc01G22960 vs. ExPASy TrEMBL
Match: A0A0A0KHH6 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516780 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 93/127 (73.23%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC CVATVMCESDAA LCWGCDSKVHGANF+VGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSS--NGATDEDDDMENQVVP 120
           P LVATVAFC NCV KNRRN      R  E+ CGS +G G++  +G  D+DD++ENQVVP
Sbjct: 61  PNLVATVAFCHNCVHKNRRNN----GRRCEKACGSSDGGGTTAPSGCDDDDDEIENQVVP 120

Query: 121 WLSSCPN 126
           WLS  P+
Sbjct: 121 WLSLSPS 123

[Close]

BLAST of Clc01G22960 vs. ExPASy TrEMBL
Match: A0A5D3CS61 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006970 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 91/130 (70.00%), Postives = 99/130 (76.15%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC CVATVMCE+DAA LCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEEGCGSSNGATDEDDD-----MENQ 120
           P LVATVAFC NCV K R N      R  E+ CGS  G  + +G  D+DDD     +ENQ
Sbjct: 61  PNLVATVAFCHNCVHKKRLNN----GRRCEKACGSSNGGTAPSGCDDDDDDDDDDEIENQ 120

Query: 121 VVPWLSSCPN 126
           VVPWLS  P+
Sbjct: 121 VVPWLSLSPS 126

[Close]

BLAST of Clc01G22960 vs. ExPASy TrEMBL
Match: A0A5A7UBH5 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003480 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 90/131 (68.70%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           MKKLCELC CVATVMCE+DAA LCWGCDSKVHGANFLVGKHLR LLCHDCQAPTPWNG+G
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PKLVATVAFCENCVEKNRRNGKTTLSRGSEEGCGSEE------GCGSSNGATDEDDDMEN 120
           P LVATVAFC NCV K R N      R  E+ CGS        GC   +   D+DD++EN
Sbjct: 61  PNLVATVAFCHNCVHKKRLNN----GRRCEKACGSSNGGTAPIGCDDDDDDDDDDDEIEN 120

Query: 121 QVVPWLSSCPN 126
           QVVPWLS  P+
Sbjct: 121 QVVPWLSLSPS 127

[Close]

BLAST of Clc01G22960 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 118.6 bits (296), Expect = 3.5e-27
Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 2   KKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTGP 61
           KK CELC  VA + CESD A LCW CD KVHGANFLV KH+R LLC  CQ+ TPW  +G 
Sbjct: 3   KKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGL 62

Query: 62  KLVATVAFCENCVEKNRRNGKTTLSRG-----SEEGCGSEEGCGSSNGATDED---DDME 119
            L  TV+ CE+C+ + + N  +   R       EE  G  +G  S +  +DED   +++E
Sbjct: 63  NLGPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEEVE 122

[Close]

BLAST of Clc01G22960 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-23
Identity = 69/156 (44.23%), Postives = 78/156 (50.00%), Query Frame = 0


Query: 1   MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
           M K C+LC  VA + CESD A LCW CD KVHGANFLV KH R LLC  CQ+ TPW  TG
Sbjct: 1   MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATG 60

Query: 61  PKLVATVAFCENCVE-KN----RRNGKTTLSRGSEEGCGSE-------EGCGSSNGA--- 120
            +L  T + CE+CV  KN    R N   + +RG EE    E       E  G  + A   
Sbjct: 61  LRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESY 120

[Close]

BLAST of Clc01G22960 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 5  CELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPT 55
          CELC+  A+V CE+D+A LC  CD  VHGANFL  +H+R +LC  CQ  T
Sbjct: 31 CELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]

BLAST of Clc01G22960 vs. TAIR 10
Match: AT1G68190.1 (B-box zinc finger family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 1  MKKLCELCECV-ATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQ 52
          M+++CE C+   A V C +D A LC  CD+KVH AN L G+HLR +LC  C+
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCK 61

[Close]

BLAST of Clc01G22960 vs. TAIR 10
Match: AT3G21150.1 (B-box 32 )

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 1  MKKLCELCECVATVMCESDAARLCWGCDSKVHGANFLVGKHLRALLCHDCQAPTPWNGTG 60
          M   CELC   A + C +D+A LC  CD+K H +NFL  +H R ++C +C++ T    +G
Sbjct: 1  MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

Query: 61 PKL 64
          P L
Sbjct: 61 PLL 63

The following BLAST results are available for this feature:

BLAST of Clc01G22960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950367.1	7.3e-51	80.00	putative zinc finger protein At1g68190 [Cucurbita moschata]	[more]
KAG6603735.1	6.2e-50	78.40	B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022977340.1	3.1e-49	77.60	zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]	[more]
XP_023544021.1	5.2e-49	77.60	zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]	[more]
TYK13089.1	2.3e-44	70.00	putative zinc finger protein [Cucumis melo var. makuwa]	[more]

BLAST of Clc01G22960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRM4	2.5e-09	56.00	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
Q9LJB7	2.1e-08	41.27	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
Q9C9F4	2.1e-08	50.00	Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68...	[more]
Q1G3I2	2.7e-08	56.00	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9SYM2	2.6e-06	32.62	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]

BLAST of Clc01G22960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEL4	3.5e-51	80.00	putative zinc finger protein At1g68190 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1IM17	1.5e-49	77.60	zinc finger protein CONSTANS-LIKE 13-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KHH6	1.4e-47	73.23	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516780 ...	[more]
A0A5D3CS61	1.1e-44	70.00	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7UBH5	1.4e-44	68.70	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Clc01G22960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54470.1	3.5e-27	48.80	B-box type zinc finger family protein	[more]
AT4G27310.1	4.0e-23	44.23	B-box type zinc finger family protein	[more]
AT3G21890.1	1.8e-10	56.00	B-box type zinc finger family protein	[more]
AT1G68190.1	1.5e-09	50.00	B-box zinc finger family protein	[more]
AT3G21150.1	1.5e-09	41.27	B-box 32	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..46 e-value: 3.3E-4 score: 30.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..125
None	No IPR available	PANTHER	PTHR31717:SF95	B-BOX TYPE ZINC FINGER PROTEIN	coord: 1..122
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G22960.1	Clc01G22960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding