Clc01G22450 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCAAGACAGAAGCAAATTAAGTGCTTTTACTCCTCTGGCTCCTCCTTCAAGGCCAGCTTCAGAGATTGAAAATAGCAATGGAAATAGATTGCTGAGGTTTCCTGACTGTAACTAGGAATGAGATGGGCTGTGCTGTGACTTAAGAGGATAAGGTTACGGAAATCAGTGAGGTTTTGGTCAGACTTTTTGAGACTCTTACTCATCGTTCCCCATCATCTTTCCCAATCAAAAGCCACCCTTTTTCTTCTAAACATTACAACTTCCCTTGATCTTATTTTGCTTTGGGTTTTTGTTTGAGTTTCTTTTCAAACCAACCCCATCTTAGAATTGAAGGGAAAAAAATAGTGCTTTATTTAACCCTTTAAATCAGAGATTCTCTTCAAATCCCATCACTTTCTCTTCCAATTATTTCAGCTTTCTGATAGGCCATGAAAGTACAATTCATCTGTTTTTTGTAATCTTTTTTGCGGTTTCCCTGTTCTTGCTGGGTGTCATTTCTGAGCCTGAACTGAGTCCCTTGAAATTTGTGATTTTCTTTGGGATTATTCAGGTCGGGGCCAACCGGCCAAGGGTTTTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTCTTCTTTTTTTTTTTTTTTCCCCATTTCTTCTCTTACTTTGTCACGGTTACTTTTGGGACTCTGCACCTCACTCTGCATCTTACTCATTTTCAGAAAAGAAAAAAAAAAAAAAAAAACCTGATAAAAATCCGTGAGAAAGCCCAGTTTCTTTTGAAGAGTGCTCAAACAGGAAGGTAGGTTCATTTCATATTGCTTTTCTCTCTCTCCCTCTCTCCAGTCTCACTGTTCCTTTTTGTTCCCAAGAAGATAAACCAGTTCAGTTCCATCTCATTCTCACTTTCCTCAGCTCCAAAAATGAAACAAAATAATTTATTTTCCCCATATATTTATATTGGAACTAGTGACTCTGTTTTACTCATTGTTAGCAAGTGATTGTTTTTATCATTTTTTGTTTCACTTCTTGTTCTGTTATTGGCTCATGGACTAAACTTCTTTTTCTCAACGTTGTAGAATGGCAGGTTCTAACACCAGATGGAGTAATGGATTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAGGAAACTTGGGGATATGTCAGGGAAAGAAAAGAAGAAGAAACTTCTGCTCCAATGTCAACAAAACTAAACCACTTCAAATCATCAGGCTCTTCTTCTTCTTCTTCTTCTTCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATGGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTTTAACTAAAACTGGTTTCTTGGAGTGA ATGCAGCAAGACAGAAGCAAATTAAGTGCTTTTACTCCTCTGGCTCCTCCTTCAAGGCCAGCTTCAGAGATTGAAAATAGCAATGGAAATAGATTGCTGAGCTTTCTGATAGGCCATGAAAGTACAATTCATCTGTTTTTTGTAATCTTTTTTGCGGTTTCCCTGTTCTTGCTGGGTGTCATTTCTGAGCCTGAACTGAGTCCCTTGAAATTTGTGATTTTCTTTGGGATTATTCAGAGTGCTCAAACAGGAAGAATGGCAGGTTCTAACACCAGATGGAGTAATGGATTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAGGAAACTTGGGGATATGTCAGGGAAAGAAAAGAAGAAGAAACTTCTGCTCCAATGTCAACAAAACTAAACCACTTCAAATCATCAGGCTCTTCTTCTTCTTCTTCTTCTTCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATGGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTTTAACTAAAACTGGTTTCTTGGAGTGA ATGCAGCAAGACAGAAGCAAATTAAGTGCTTTTACTCCTCTGGCTCCTCCTTCAAGGCCAGCTTCAGAGATTGAAAATAGCAATGGAAATAGATTGCTGAGCTTTCTGATAGGCCATGAAAGTACAATTCATCTGTTTTTTGTAATCTTTTTTGCGGTTTCCCTGTTCTTGCTGGGTGTCATTTCTGAGCCTGAACTGAGTCCCTTGAAATTTGTGATTTTCTTTGGGATTATTCAGAGTGCTCAAACAGGAAGAATGGCAGGTTCTAACACCAGATGGAGTAATGGATTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAGGAAACTTGGGGATATGTCAGGGAAAGAAAAGAAGAAGAAACTTCTGCTCCAATGTCAACAAAACTAAACCACTTCAAATCATCAGGCTCTTCTTCTTCTTCTTCTTCTTCTTGGCGCATGCAGATCAACTCTGCTCCTAAAATGATACCAAAAGCCAAAACAACAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGATTGGTCAAAGATATATGGAAGAAATGGCAATATGGGTTCATGGATAAATGATGAATATGGCTTGGTTGATGGTGCTGCATGTAATGGTTTTGTTAATGATGATGATGAGGAGGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGAGTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTTTAACTAAAACTGGTTTCTTGGAGTGA MQQDRSKLSAFTPLAPPSRPASEIENSNGNRLLSFLIGHESTIHLFFVIFFAVSLFLLGVISEPELSPLKFVIFFGIIQSAQTGRMAGSNTRWSNGFHGKSIKDEDFDEEETWGYVRERKEEETSAPMSTKLNHFKSSGSSSSSSSSWRMQINSAPKMIPKAKTTANQEPKTVKRSSAPLEIPDWSKIYGRNGNMGSWINDEYGLVDGAACNGFVNDDDEEEDVMVPPHEWIARKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE Homology
BLAST of Clc01G22450 vs. NCBI nr
Match: KAG7033948.1 (hypothetical protein SDJN02_03674, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.9 bits (1008), Expect = 2.3e-105 Identity = 217/295 (73.56%), Postives = 235/295 (79.66%), Query Frame = 0
BLAST of Clc01G22450 vs. NCBI nr
Match: XP_038881073.1 (uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881074.1 uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881075.1 uncharacterized protein LOC120072694 [Benincasa hispida] >XP_038881076.1 uncharacterized protein LOC120072694 [Benincasa hispida]) HSP 1 Score: 339.7 bits (870), Expect = 2.3e-89 Identity = 172/195 (88.21%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of Clc01G22450 vs. NCBI nr
Match: XP_011658149.1 (uncharacterized protein LOC101209587 isoform X1 [Cucumis sativus]) HSP 1 Score: 334.0 bits (855), Expect = 1.3e-87 Identity = 174/198 (87.88%), Postives = 180/198 (90.91%), Query Frame = 0
BLAST of Clc01G22450 vs. NCBI nr
Match: XP_011658151.1 (uncharacterized protein LOC101209587 isoform X2 [Cucumis sativus] >KGN49111.1 hypothetical protein Csa_004432 [Cucumis sativus]) HSP 1 Score: 332.0 bits (850), Expect = 4.8e-87 Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 0
BLAST of Clc01G22450 vs. NCBI nr
Match: XP_016899153.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X1 [Cucumis melo]) HSP 1 Score: 331.6 bits (849), Expect = 6.2e-87 Identity = 172/197 (87.31%), Postives = 180/197 (91.37%), Query Frame = 0
BLAST of Clc01G22450 vs. ExPASy TrEMBL
Match: A0A0A0KN13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513750 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 2.3e-87 Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 0
BLAST of Clc01G22450 vs. ExPASy TrEMBL
Match: A0A1S4DT69 (uncharacterized protein LOC103484610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 3.0e-87 Identity = 172/197 (87.31%), Postives = 180/197 (91.37%), Query Frame = 0
BLAST of Clc01G22450 vs. ExPASy TrEMBL
Match: A0A1S3B0T6 (uncharacterized protein LOC103484610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 5.2e-87 Identity = 172/196 (87.76%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of Clc01G22450 vs. ExPASy TrEMBL
Match: A0A5D3CRL7 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006480 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 8.8e-87 Identity = 172/198 (86.87%), Postives = 179/198 (90.40%), Query Frame = 0
BLAST of Clc01G22450 vs. ExPASy TrEMBL
Match: A0A6J1GF36 (uncharacterized protein LOC111453373 OS=Cucurbita moschata OX=3662 GN=LOC111453373 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 2.7e-75 Identity = 152/193 (78.76%), Postives = 166/193 (86.01%), Query Frame = 0
BLAST of Clc01G22450 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 145.6 bits (366), Expect = 5.9e-35 Identity = 88/175 (50.29%), Postives = 114/175 (65.14%), Query Frame = 0
BLAST of Clc01G22450 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 129.4 bits (324), Expect = 4.4e-30 Identity = 79/175 (45.14%), Postives = 102/175 (58.29%), Query Frame = 0
BLAST of Clc01G22450 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 79.0 bits (193), Expect = 6.8e-15 Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 0
BLAST of Clc01G22450 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 76.3 bits (186), Expect = 4.4e-14 Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of Clc01G22450 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 75.9 bits (185), Expect = 5.7e-14 Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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