Homology
BLAST of Clc01G20800 vs. NCBI nr
Match:
XP_038882774.1 (pentatricopeptide repeat-containing protein At3g51320 [Benincasa hispida])
HSP 1 Score: 1137.1 bits (2940), Expect = 0.0e+00
Identity = 545/596 (91.44%), Postives = 577/596 (96.81%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARISTR+LFRFTHA LPLPFKSVDRSSSPFSSFPEPDLSL+TTNPPRHNRS+SLLQSCQ
Sbjct: 1 MARISTRKLFRFTHAPLPLPFKSVDRSSSPFSSFPEPDLSLDTTNPPRHNRSHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
SVRELLQIHGHLITSG F HHFWANRVL QASEFGD++YTVL+FRYI++PNTFCINRVIK
Sbjct: 61 SVRELLQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFRYISVPNTFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS VPLEAV LYFEWLGNGFRPDSYTFL+LFSACA+FGC ASGRKCHGQAFKNG+DS
Sbjct: 121 AYSLSTVPLEAVFLYFEWLGNGFRPDSYTFLALFSACASFGCEASGRKCHGQAFKNGVDS 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMYGCCGHIELGRKVFDEMS+WDLVSWNSIVTAYAR GDLH+AHD+FD MP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTWDLVSWNSIVTAYARVGDLHSAHDMFDKMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNV GACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVFGACGRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYR M FCVFI+TALVDMYSKCQ+VSIARRVFDRMLSRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRNLMNFCVFIDTALVDMYSKCQKVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKLF+EMAAKLREINGE G+GK+FKQ EGK+ V+PDQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLFEEMAAKLREINGETGSGKEFKQYEGKQKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NYF+EMINVFLVRPNFAHYWCLANVYVAAGLIQ+AVEILRN+PED+EDFSS+SVVWINL
Sbjct: 421 KNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQEAVEILRNMPEDNEDFSSESVVWINL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
LT CRFVGDVSLGEQIAKYLID+EPKNDSY RLLLNIYAVAGRWEDVSRIKLLMKEKRLG
Sbjct: 481 LTTCRFVGDVSLGEQIAKYLIDMEPKNDSYNRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
TMPGCRL+DLKEIVHRLKLGNLLQ+GMKETNTVMHKLASEVSLLSSIAAGQSDFGV
Sbjct: 541 TMPGCRLIDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 596
BLAST of Clc01G20800 vs. NCBI nr
Match:
XP_023544620.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1074.7 bits (2778), Expect = 4.6e-310
Identity = 512/596 (85.91%), Postives = 559/596 (93.79%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARI +RQLFRFT ASLP P KS+DR SSPF SF EPDLSL+T NPPRHNR +SLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTRNPPRHNRCHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
S+REL+QIHG+LITSG F HHFWANRVL QASEFGD++YTVL+F+ IN+PN FCINRVIK
Sbjct: 61 SMRELVQIHGYLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS VPLEAV +YF+WLG+GFRPD+YTFLSLF ACA+ GCG+SGRKCHGQAFKNG+D
Sbjct: 121 AYSLSSVPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMY CCGHIELGRKVFDEMS+ DLVSWNSIVTAYAR GDLHTAHD+FDAMP
Sbjct: 181 VMVLRNSLIHMYACCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGG+PGCAMKLFRNM+ IGIRGN+TTMVN+LGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTSMKFCVFI+TALVDMY KCQRVS+ARR+FDRM++RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKLF+EMAAKLRE NGE G+GKKFKQDEG+R V+PDQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NNYF+EMIN+FLVRPNFAHYWCLANVYVAAGLIQQAVEILRN+PED EDFSS+ VVW NL
Sbjct: 421 NNYFDEMINIFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
L CRF GDVSLGEQIA YLID+EPKN+SYYRLLLNIYAVAGRWEDVSRIK+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
T PGCRLVDLKEIVHRLKLGNLLQ+GMKETN+VMHKLASEVSLLS+IAAGQSD V
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNSVMHKLASEVSLLSTIAAGQSDLRV 596
BLAST of Clc01G20800 vs. NCBI nr
Match:
XP_022950690.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita moschata])
HSP 1 Score: 1066.2 bits (2756), Expect = 1.0e-307
Identity = 510/596 (85.57%), Postives = 554/596 (92.95%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARI +RQLFRFT ASLP P K +DR SPF SF EPDLSL+ NPPRHNR +SLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
S+REL+QIHGHLITSG F HHFWANRVL QASEFGD++YTVL+F+ IN+PN FCINRVIK
Sbjct: 61 SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS PLEAV +YF+WLG+GFRPD+YTFLSLF ACA+ GCG+SGRKCHGQAFKNG+D
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMYGCCGHIELGRKVFDEM + DLVSWNSIVTAYAR GDLHTAHD+FDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGG+PGCAMKLFRNM+ IGIRGN+TTMVN+LGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTSMKFCVFI+TALVDMY KCQRVS+ARR+FDRM++RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKLF+EMAAKLRE NGE G+GKKFKQDEG+R V+ DQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NNYF+EMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRN+PED EDFSS+ VVW NL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
L CRF GDVSLGEQIA YLID+EPKN+SYYRLLLNIYAVAGRWEDVSRIK+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
T PGCRLVDLKEIVHRLKLGNLLQ+GMKETNTVMHKLASEVSLLS+IAAGQSD V
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
BLAST of Clc01G20800 vs. NCBI nr
Match:
KAG6603895.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1064.3 bits (2751), Expect = 3.8e-307
Identity = 510/596 (85.57%), Postives = 553/596 (92.79%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARI +RQLFRFT ASLP P K +DR SPF SF EPDLSL+ NPPRHNR +SLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
S+REL+QIHGHLITSG F HHFWANRVL QASEFGD++YTVL+F+ I +PN FCINRVIK
Sbjct: 61 SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS PLEAV +YF+WLG GFRPD+YTFLSLF ACA+FGCG+SGRKCHGQAFKNG+D
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMYGCCGHIELGRKVFDEMS+ DLVSWNSIVTAYAR GDL TAHD+FDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGG+PGCAMKLFRNM+ IGIRGN+TTMVN+LGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTSMKFCVFI+TALVDMY KCQRVS+ARR+FDRM++RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKLF+EMAAKLRE NGE G+GKKFKQDEG+R V+ DQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NNYF+EMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRN+PED EDFSS+ VVW NL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
L CRF GDVSLGEQIA YLID+EPKN+SYYRLLLNIYAVAGRWEDVSRIK+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
T PGCRLVDLKEIVHRLKLGNLLQ+GMKETNTVMHKLASEVSLLS+IAAGQSD V
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
BLAST of Clc01G20800 vs. NCBI nr
Match:
XP_022978359.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1050.8 bits (2716), Expect = 4.4e-303
Identity = 506/596 (84.90%), Postives = 549/596 (92.11%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARI +RQLFRFT ASLP P KS+DR SSPF SF EPDLSL+T NPPRHNR +SLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTINPPRHNRCHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
S+REL+QIHGHLITSG F HHFWANRVL QASEFGD++YTVL+F+ IN+PN FCINRVIK
Sbjct: 61 SIRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS PLEAV +YF+WLG+GFRPD+YTFLSLF ACA+ GCG+SGRKCHGQAFKNG+D
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMYGCCG+IELGRKVFDEMS+ DLVSWNSIVTAYAR GDLHTAHD+FDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGG+PGCAMKLFRNM+ IGIRGN+TTMVN+LGACGRSA LNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTS KFCVFI TALVDMY KCQRV IARR+FDRM +RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSTKFCVFIGTALVDMYGKCQRVCIARRLFDRMPNRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKL++EMAAKLRE NGE G+GKKFKQDEG+R V+PDQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLYEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NNYF+EMINVFLV+PNFAHYWCLANVYVAAGLIQQAVEILRN+ ED EDFSS+ VVW NL
Sbjct: 421 NNYFDEMINVFLVKPNFAHYWCLANVYVAAGLIQQAVEILRNMTEDIEDFSSELVVWTNL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
L CRF GDVSLGEQIA YLID+EPKN+SYYRLLLNIYAVAGRWEDVSRIK+LMKEKRLG
Sbjct: 481 LATCRFRGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
T PGCRLVDLKEIVHRLKLGNLLQ ETNTVMHKLASEVSLLS+IAAGQSD V
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQ----ETNTVMHKLASEVSLLSTIAAGQSDLRV 592
BLAST of Clc01G20800 vs. ExPASy Swiss-Prot
Match:
Q0WVU0 (Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX=3702 GN=At3g51320 PE=2 SV=1)
HSP 1 Score: 535.0 bits (1377), Expect = 1.1e-150
Identity = 254/510 (49.80%), Postives = 345/510 (67.65%), Query Frame = 0
Query: 51 RSYSLLQSCQSVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIP 110
+ + L++ S+ L Q+H LITSG F WA R+L +S FGD YTV ++R +I
Sbjct: 24 KGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYR--SIG 83
Query: 111 NTFCINRVIKAYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCH 170
+C N V KAY +S P +A+ YF+ L GF PDSYTF+SL S C SG+ CH
Sbjct: 84 KLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 143
Query: 171 GQAFKNGIDSVMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLH 230
GQA K+G D V+ ++NSL+HMY CCG ++L +K+F E+ D+VSWNSI+ R GD+
Sbjct: 144 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 203
Query: 231 TAHDLFDAMPERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACG 290
AH LFD MP++NI+SWN+MIS YL NPG ++ LFR MV G +GN +T+V +L ACG
Sbjct: 204 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 263
Query: 291 RSARLNEGRSVHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNA 350
RSARL EGRSVH + RT + V I+TAL+DMY KC+ V +ARR+FD + RN VTWN
Sbjct: 264 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 323
Query: 351 MVLGHCLHGNPDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCA 410
M+L HCLHG P+ GL+LF+ M ING + PD++TF+GVLC
Sbjct: 324 MILAHCLHGRPEGGLELFEAM------INGML---------------RPDEVTFVGVLCG 383
Query: 411 CARAGLLKDANNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDF 470
CARAGL+ +Y++ M++ F ++PNF H WC+AN+Y +AG ++A E L+N+P DED
Sbjct: 384 CARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLP--DEDV 443
Query: 471 SSDSVVWINLLTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRI 530
+ +S W NLL+ RF G+ +LGE IAK LI+ +P N YY LL+NIY+V GRWEDV+R+
Sbjct: 444 TPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRV 503
Query: 531 KLLMKEKRLGTMPGCRLVDLKEIVHRLKLG 561
+ ++KE+++G +PGC LVDLKEIVH L+LG
Sbjct: 504 REMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
BLAST of Clc01G20800 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 4.7e-82
Identity = 167/500 (33.40%), Postives = 269/500 (53.80%), Query Frame = 0
Query: 59 CQSVRELLQIHGHLITSGRFKHHFWANRVL-FQASEFGDVIYTVLVFRYINIPNTFCINR 118
C ++REL QIH LI +G A+RVL F + D+ Y LVF IN N F N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 119 VIKAYSLSIVPLEAVSLYFEWL--GNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFK 178
+I+ +S S P A+S++ + L +P T+ S+F A G GR+ HG K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 179 NGIDSVMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDL 238
G++ +RN+++HMY CG + ++F M +D+V+WNS++ +A+ G + A +L
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 239 FDAMPERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARL 298
FD MP+RN VSWN MIS ++R G A+ +FR M ++ + TMV++L AC
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 299 NEGRSVHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGH 358
+GR +H ++ R + + TAL+DMY KC + VF+ + L WN+M+LG
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 359 CLHGNPDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAG 418
+G + + LF E+ + + PD ++FIGVL ACA +G
Sbjct: 335 ANNGFEERAMDLFSELE---------------------RSGLEPDSVSFIGVLTACAHSG 394
Query: 419 LLKDANNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSV 478
+ A+ +F M +++ P+ HY + NV AGL+++A +++N+P ++ D+V
Sbjct: 395 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE-----DTV 454
Query: 479 VWINLLTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMK 538
+W +LL+ CR +G+V + ++ AK L L+P Y LL N YA G +E+ +LLMK
Sbjct: 455 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 508
Query: 539 EKRLGTMPGCRLVDLKEIVH 556
E+++ GC +++ VH
Sbjct: 515 ERQMEKEVGCSSIEVDFEVH 508
BLAST of Clc01G20800 vs. ExPASy Swiss-Prot
Match:
Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)
HSP 1 Score: 303.5 bits (776), Expect = 5.2e-81
Identity = 180/572 (31.47%), Postives = 290/572 (50.70%), Query Frame = 0
Query: 54 SLLQSCQSVRELLQIHGHLITSG-RFKHHFWANRVLFQASEFGDVI-YTVLVFRYINIPN 113
SLL SC+++R L QIHG I G +F +L A D + Y + P+
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69
Query: 114 TFCINRVIKAYSLSIVPLEAVSLYFEWLGNGF-RPDSYTFLSLFSACANFGCGASGRKCH 173
F N +++ YS S P +V+++ E + GF PDS++F + A NF +G + H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 174 GQAFKNGIDSVMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLH 233
QA K+G++S + + +LI MYG CG +E RKVFDEM +LV+WN+++TA R D+
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 234 TAHDLFDAMPERNIVSWNLMISEYLRGGNPGCAMKL------------------------ 293
A ++FD M RN SWN+M++ Y++ G A ++
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 294 -------FRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRTSMKFCVFINTA 353
FR + G+ N ++ VL AC +S G+ +HGF+ + + V +N A
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 354 LVDMYSKCQRVSIARRVFDRML-SRNLVTWNAMVLGHCLHGNPDDGLKLFQEMAAKLREI 413
L+DMYS+C V +AR VF+ M R +V+W +M+ G +HG ++ ++LF EM A
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA----- 369
Query: 414 NGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDANNYFNEMINVFLVRPNFA 473
V PD I+FI +L AC+ AGL+++ +YF+EM V+ + P
Sbjct: 370 ----------------YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 429
Query: 474 HYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINLLTMCRFVGDVSLGEQIAK 533
HY C+ ++Y +G +Q+A + + +P ++VW LL C G++ L EQ+ +
Sbjct: 430 HYGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELAEQVKQ 489
Query: 534 YLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMPGCRLVDLKEIVHRLK 591
L +L+P N LL N YA AG+W+DV+ I+ M +R+ LV++ + +++
Sbjct: 490 RLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFT 549
BLAST of Clc01G20800 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 300.8 bits (769), Expect = 3.4e-80
Identity = 184/564 (32.62%), Postives = 292/564 (51.77%), Query Frame = 0
Query: 27 SSSPF--SSFPEPDLSLETT---NPPRHNRSYSLLQSCQSVRELLQIHGHLITSGRFKHH 86
+SSP +S P+ LS T P + L+ QSV E+LQIH ++ H
Sbjct: 2 ASSPLLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHP 61
Query: 87 FW--ANRVLFQA-SEFGDVIYTVLVFRYINIPNTFCINRVIKAYSLSIVPLEAVSLYFEW 146
+ N L +A + G + +++ +F P+ F I S++ + +A LY +
Sbjct: 62 RYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL 121
Query: 147 LGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDSVMVLRNSLIHMYGCCGHI 206
L + P+ +TF SL +C+ SG+ H K G+ + L+ +Y G +
Sbjct: 122 LSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDV 181
Query: 207 ELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMPERNIVSWNLMISEYLRGG 266
+KVFD M LVS +++T YA+ G++ A LFD+M ER+IVSWN+MI Y + G
Sbjct: 182 VSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 241
Query: 267 NPGCAMKLFRNMVNIG-IRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRTSMKFCVFIN 326
P A+ LF+ ++ G + + T+V L AC + L GR +H F+ + ++ V +
Sbjct: 242 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVC 301
Query: 327 TALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGNPDDGLKLFQEMAAKLRE 386
T L+DMYSKC + A VF+ +++V WNAM+ G+ +HG D L+LF EM
Sbjct: 302 TGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM------ 361
Query: 387 INGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDANNYFNEMINVFLVRPNF 446
+G + P ITFIG L ACA AGL+ + F M + ++P
Sbjct: 362 --------------QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKI 421
Query: 447 AHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINLLTMCRFVGDVSLGEQIA 506
HY CL ++ AG +++A E ++N+ D +DSV+W ++L C+ GD LG++IA
Sbjct: 422 EHYGCLVSLLGRAGQLKRAYETIKNMNMD-----ADSVLWSSVLGSCKLHGDFVLGKEIA 481
Query: 507 KYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMPGCRLVDLKEIVHRL 566
+YLI L KN Y LL NIYA G +E V++++ LMKEK + PG ++++ VH
Sbjct: 482 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 536
Query: 567 KLGNLLQDGMKETNTVMHKLASEV 582
+ G+ KE T++ K++ +
Sbjct: 542 RAGDREHSKSKEIYTMLRKISERI 536
BLAST of Clc01G20800 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 292.4 bits (747), Expect = 1.2e-77
Identity = 174/577 (30.16%), Postives = 293/577 (50.78%), Query Frame = 0
Query: 29 SPFSSFPEPDLSLETTNPPRHNRS-YSLLQSCQSVRELLQIHGHLITSGRFKHHFWANRV 88
+P + P + ++P H S + + +C+++R+L QIH I SG+ + A +
Sbjct: 2 NPTQTLFSPGGNSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEI 61
Query: 89 L-FQAS---EFGDVIYTVLVFRYINIPNTFCINRVIKAYSLS--IVPLEAVSLYFEWLGN 148
L F A+ D+ Y +F + N F N +I+ +S S L A++L++E + +
Sbjct: 62 LRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD 121
Query: 149 GF-RPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDSVMVLRNSLIHMYGCCGHIEL 208
F P+ +TF S+ ACA G G++ HG A K G + ++L+ MY CG ++
Sbjct: 122 EFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKD 181
Query: 209 GRKVF--------------DEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMPERNIVS 268
R +F ++V WN ++ Y R GD A LFD M +R++VS
Sbjct: 182 ARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVS 241
Query: 269 WNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMY 328
WN MIS Y G A+++FR M IR N T+V+VL A R L G +H +
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE 301
Query: 329 RTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGNPDDGLK 388
+ ++ + +AL+DMYSKC + A VF+R+ N++TW+AM+ G +HG D +
Sbjct: 302 DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
Query: 389 LFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDANNYFNE 448
F +M + V P + +I +L AC+ GL+++ YF++
Sbjct: 362 CFCKMR---------------------QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 421
Query: 449 MINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINLLTMCRF 508
M++V + P HY C+ ++ +GL+ +A E + N+P D V+W LL CR
Sbjct: 422 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP-----IKPDDVIWKALLGACRM 481
Query: 509 VGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMPGCR 568
G+V +G+++A L+D+ P + Y L N+YA G W +VS ++L MKEK + PGC
Sbjct: 482 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 541
Query: 569 LVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSL 584
L+D+ ++H + + KE N+++ +++ ++ L
Sbjct: 542 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
BLAST of Clc01G20800 vs. ExPASy TrEMBL
Match:
A0A6J1GGG4 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)
HSP 1 Score: 1066.2 bits (2756), Expect = 4.9e-308
Identity = 510/596 (85.57%), Postives = 554/596 (92.95%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARI +RQLFRFT ASLP P K +DR SPF SF EPDLSL+ NPPRHNR +SLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
S+REL+QIHGHLITSG F HHFWANRVL QASEFGD++YTVL+F+ IN+PN FCINRVIK
Sbjct: 61 SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS PLEAV +YF+WLG+GFRPD+YTFLSLF ACA+ GCG+SGRKCHGQAFKNG+D
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMYGCCGHIELGRKVFDEM + DLVSWNSIVTAYAR GDLHTAHD+FDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGG+PGCAMKLFRNM+ IGIRGN+TTMVN+LGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTSMKFCVFI+TALVDMY KCQRVS+ARR+FDRM++RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKLF+EMAAKLRE NGE G+GKKFKQDEG+R V+ DQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NNYF+EMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRN+PED EDFSS+ VVW NL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
L CRF GDVSLGEQIA YLID+EPKN+SYYRLLLNIYAVAGRWEDVSRIK+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
T PGCRLVDLKEIVHRLKLGNLLQ+GMKETNTVMHKLASEVSLLS+IAAGQSD V
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
BLAST of Clc01G20800 vs. ExPASy TrEMBL
Match:
A0A6J1ITV7 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478374 PE=4 SV=1)
HSP 1 Score: 1050.8 bits (2716), Expect = 2.1e-303
Identity = 506/596 (84.90%), Postives = 549/596 (92.11%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARI +RQLFRFT ASLP P KS+DR SSPF SF EPDLSL+T NPPRHNR +SLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTINPPRHNRCHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
S+REL+QIHGHLITSG F HHFWANRVL QASEFGD++YTVL+F+ IN+PN FCINRVIK
Sbjct: 61 SIRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS PLEAV +YF+WLG+GFRPD+YTFLSLF ACA+ GCG+SGRKCHGQAFKNG+D
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVLRNSLIHMYGCCG+IELGRKVFDEMS+ DLVSWNSIVTAYAR GDLHTAHD+FDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGG+PGCAMKLFRNM+ IGIRGN+TTMVN+LGACGRSA LNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTS KFCVFI TALVDMY KCQRV IARR+FDRM +RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSTKFCVFIGTALVDMYGKCQRVCIARRLFDRMPNRNLVTWNAMVLGHCLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P+DGLKL++EMAAKLRE NGE G+GKKFKQDEG+R V+PDQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLKLYEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NNYF+EMINVFLV+PNFAHYWCLANVYVAAGLIQQAVEILRN+ ED EDFSS+ VVW NL
Sbjct: 421 NNYFDEMINVFLVKPNFAHYWCLANVYVAAGLIQQAVEILRNMTEDIEDFSSELVVWTNL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
L CRF GDVSLGEQIA YLID+EPKN+SYYRLLLNIYAVAGRWEDVSRIK+LMKEKRLG
Sbjct: 481 LATCRFRGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSLLSSIAAGQSDFGV 597
T PGCRLVDLKEIVHRLKLGNLLQ ETNTVMHKLASEVSLLS+IAAGQSD V
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQ----ETNTVMHKLASEVSLLSTIAAGQSDLRV 592
BLAST of Clc01G20800 vs. ExPASy TrEMBL
Match:
A0A1S4DTP8 (pentatricopeptide repeat-containing protein At3g51320 OS=Cucumis melo OX=3656 GN=LOC103485152 PE=4 SV=1)
HSP 1 Score: 1048.5 bits (2710), Expect = 1.1e-302
Identity = 503/575 (87.48%), Postives = 540/575 (93.91%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARISTRQLFRFTH LPLPFKSV RSSSPFS+FPEPD S ETTNPPRH++S+SLLQSC+
Sbjct: 1 MARISTRQLFRFTHFPLPLPFKSVGRSSSPFSAFPEPDHSPETTNPPRHDQSHSLLQSCE 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
SVREL QIHGHLITSG F +HFWANRVL QASEFGD++YT+L+FR+I +PNTFC+NRVIK
Sbjct: 61 SVRELFQIHGHLITSGLFNYHFWANRVLLQASEFGDIVYTILIFRHIKVPNTFCVNRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS VPLEAV +YFEWLGNG RPDSYTFLSLFSACA+FGCGASGRKCHGQAFKNG+DS
Sbjct: 121 AYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVDS 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVL NSLIHMYGCCGHIELGRKVFDEMS+ DLVSWNSIVTAYAR GD++TAHD+FD MP
Sbjct: 181 VMVLGNSLIHMYGCCGHIELGRKVFDEMSTRDLVSWNSIVTAYARVGDMYTAHDMFDVMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGGNPGCAMKLFRNMVN+GIRGNNTTMVNVLGAC RSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLGACSRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTSMKFCVFI+TALVDMYSKCQRV IARRVFDRM+SRNLVTWNAMVLGH LHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYSKCQRVLIARRVFDRMMSRNLVTWNAMVLGHSLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P DGLKLF+EMAA+LRE+ E GNGKKFKQDEGKR V+PDQITFIGVLCACARAGLLKDA
Sbjct: 361 PQDGLKLFEEMAAELREMIEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NYF+EMI VFLVRPNFAHYWCLANVYVA GLI+QAVEILRN+P EDFSS+SVVWI+L
Sbjct: 421 KNYFDEMIKVFLVRPNFAHYWCLANVYVAVGLIEQAVEILRNMP---EDFSSESVVWIDL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
LT CRFVGDVSLGEQIAKYLID+EPKNDSYYRLLLN+YAVAGRWEDVSRIKLLMKEKRLG
Sbjct: 481 LTTCRFVGDVSLGEQIAKYLIDIEPKNDSYYRLLLNMYAVAGRWEDVSRIKLLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMH 576
TMPGCRLVDLKEIVH LKLGN LQ+ MKETNTV+H
Sbjct: 541 TMPGCRLVDLKEIVHDLKLGNHLQERMKETNTVIH 572
BLAST of Clc01G20800 vs. ExPASy TrEMBL
Match:
A0A5D3CKW6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001040 PE=4 SV=1)
HSP 1 Score: 1048.1 bits (2709), Expect = 1.4e-302
Identity = 503/575 (87.48%), Postives = 540/575 (93.91%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARISTRQLFRFTH LPLPFKSV RSSSPFS+FPEPD S ETTNPPRH++S+SLLQSC+
Sbjct: 1 MARISTRQLFRFTHFPLPLPFKSVGRSSSPFSAFPEPDHSPETTNPPRHDQSHSLLQSCE 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
SVREL QIHGHLITSG F +HFWANRVL QASEFGD++YT+L+FR+I +PNTFC+NRVIK
Sbjct: 61 SVRELFQIHGHLITSGLFNYHFWANRVLLQASEFGDIVYTILIFRHIKVPNTFCVNRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS VPLEAV +YFEWLGNG RPDSYTFLSLFSACA+FGCGASGRKCHGQAFKNG+DS
Sbjct: 121 AYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVDS 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVL NSLIHMYGCCGHIELGRKVFDEMS+ DLVSWNSIVTAYAR GD++TAHD+FD MP
Sbjct: 181 VMVLGNSLIHMYGCCGHIELGRKVFDEMSTRDLVSWNSIVTAYARVGDMYTAHDMFDVMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGGNPGCAMKLFRNMVN+GIRGNNTTMVNVLGAC RSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLGACSRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYRTSMKFCVFI+TALVDMYSKCQRV IARRVFDRM+SRNLVTWNAMVLGH LHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYSKCQRVLIARRVFDRMMSRNLVTWNAMVLGHSLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P DGLKLF+EMAA+LRE+ E GNGKKFKQDEGKR V+PDQITFIGVLCACARAGLLKDA
Sbjct: 361 PKDGLKLFEEMAAELREMIEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NYF+EMI VFLVRPNFAHYWCLANVYVA GLI+QAVEILRN+P EDFSS+SVVWI+L
Sbjct: 421 KNYFDEMIKVFLVRPNFAHYWCLANVYVAVGLIEQAVEILRNMP---EDFSSESVVWIDL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
LT CRFVGDVSLGEQIAKYLID+EPKNDSYYRLLLN+YAVAGRWEDVSRIKLLMKEKRLG
Sbjct: 481 LTTCRFVGDVSLGEQIAKYLIDIEPKNDSYYRLLLNMYAVAGRWEDVSRIKLLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMH 576
TMPGCRLVDLKEIVH LKLGN LQ+ MKETNTV+H
Sbjct: 541 TMPGCRLVDLKEIVHDLKLGNHLQERMKETNTVIH 572
BLAST of Clc01G20800 vs. ExPASy TrEMBL
Match:
A0A0A0KMJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507160 PE=4 SV=1)
HSP 1 Score: 1046.6 bits (2705), Expect = 4.0e-302
Identity = 500/575 (86.96%), Postives = 534/575 (92.87%), Query Frame = 0
Query: 1 MARISTRQLFRFTHASLPLPFKSVDRSSSPFSSFPEPDLSLETTNPPRHNRSYSLLQSCQ 60
MARISTR LFRFTH LPLPFKSVDRSSSPFSSFPEP S +TTNPPRHN+S+SLLQSCQ
Sbjct: 1 MARISTRLLFRFTHFPLPLPFKSVDRSSSPFSSFPEPVHSPDTTNPPRHNQSHSLLQSCQ 60
Query: 61 SVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIPNTFCINRVIK 120
SVREL Q HGHLITSG F HFWANRVL QASEFGD++YTVL+FR+I +PNTFC+NRVIK
Sbjct: 61 SVRELFQFHGHLITSGLFNDHFWANRVLLQASEFGDIVYTVLIFRHIKVPNTFCVNRVIK 120
Query: 121 AYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDS 180
AYSLS VPLEAV +YFEWLGNG RPDSYTFLSLFSACA+FGCGASGRKCHGQAFKNG+DS
Sbjct: 121 AYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVDS 180
Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMP 240
VMVL NSLIHMYGCC HIELGRKVFDEMS+ DLVSWNSIVTAYAR GDL+TAHD+FD MP
Sbjct: 181 VMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSIVTAYARVGDLYTAHDMFDVMP 240
Query: 241 ERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRS 300
ERN+VSWNLMISEYLRGGNPGCAMKLFRNMVN+GIRGNNTTMVNVL AC RSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLSACSRSARLNEGRS 300
Query: 301 VHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
VHGFMYR SMKFCVFINTALVDMYSKC RVS+ARRVFDR++ RNLVTWNAM+LGH LHGN
Sbjct: 301 VHGFMYRASMKFCVFINTALVDMYSKCHRVSVARRVFDRLMIRNLVTWNAMILGHSLHGN 360
Query: 361 PDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDA 420
P DGL+LF+EM +LREIN E GNGKKFKQDEGKR V+PDQITFIGVLCACARAGLLKDA
Sbjct: 361 PKDGLELFEEMVGELREINEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDA 420
Query: 421 NNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINL 480
NYF+EMINVFLVRPNF HYWCLANVYVA GLI+QAVEILRN+PED+EDFSS+SVVWI+L
Sbjct: 421 ENYFDEMINVFLVRPNFGHYWCLANVYVAVGLIEQAVEILRNMPEDNEDFSSESVVWIDL 480
Query: 481 LTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
LT CRFVGDVSLGEQIAKYLID+EPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG
Sbjct: 481 LTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLGNLLQDGMKETNTVMH 576
TM GCRLVDLKEIVH LKLGN LQ+ MKETNTV+H
Sbjct: 541 TMSGCRLVDLKEIVHSLKLGNHLQERMKETNTVIH 575
BLAST of Clc01G20800 vs. TAIR 10
Match:
AT3G51320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 535.0 bits (1377), Expect = 7.5e-152
Identity = 254/510 (49.80%), Postives = 345/510 (67.65%), Query Frame = 0
Query: 51 RSYSLLQSCQSVRELLQIHGHLITSGRFKHHFWANRVLFQASEFGDVIYTVLVFRYINIP 110
+ + L++ S+ L Q+H LITSG F WA R+L +S FGD YTV ++R +I
Sbjct: 24 KGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYR--SIG 83
Query: 111 NTFCINRVIKAYSLSIVPLEAVSLYFEWLGNGFRPDSYTFLSLFSACANFGCGASGRKCH 170
+C N V KAY +S P +A+ YF+ L GF PDSYTF+SL S C SG+ CH
Sbjct: 84 KLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 143
Query: 171 GQAFKNGIDSVMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLH 230
GQA K+G D V+ ++NSL+HMY CCG ++L +K+F E+ D+VSWNSI+ R GD+
Sbjct: 144 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 203
Query: 231 TAHDLFDAMPERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACG 290
AH LFD MP++NI+SWN+MIS YL NPG ++ LFR MV G +GN +T+V +L ACG
Sbjct: 204 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 263
Query: 291 RSARLNEGRSVHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNA 350
RSARL EGRSVH + RT + V I+TAL+DMY KC+ V +ARR+FD + RN VTWN
Sbjct: 264 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 323
Query: 351 MVLGHCLHGNPDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCA 410
M+L HCLHG P+ GL+LF+ M ING + PD++TF+GVLC
Sbjct: 324 MILAHCLHGRPEGGLELFEAM------INGML---------------RPDEVTFVGVLCG 383
Query: 411 CARAGLLKDANNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDF 470
CARAGL+ +Y++ M++ F ++PNF H WC+AN+Y +AG ++A E L+N+P DED
Sbjct: 384 CARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLP--DEDV 443
Query: 471 SSDSVVWINLLTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRI 530
+ +S W NLL+ RF G+ +LGE IAK LI+ +P N YY LL+NIY+V GRWEDV+R+
Sbjct: 444 TPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRV 503
Query: 531 KLLMKEKRLGTMPGCRLVDLKEIVHRLKLG 561
+ ++KE+++G +PGC LVDLKEIVH L+LG
Sbjct: 504 REMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
BLAST of Clc01G20800 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 307.0 bits (785), Expect = 3.3e-83
Identity = 167/500 (33.40%), Postives = 269/500 (53.80%), Query Frame = 0
Query: 59 CQSVRELLQIHGHLITSGRFKHHFWANRVL-FQASEFGDVIYTVLVFRYINIPNTFCINR 118
C ++REL QIH LI +G A+RVL F + D+ Y LVF IN N F N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 119 VIKAYSLSIVPLEAVSLYFEWL--GNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFK 178
+I+ +S S P A+S++ + L +P T+ S+F A G GR+ HG K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 179 NGIDSVMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDL 238
G++ +RN+++HMY CG + ++F M +D+V+WNS++ +A+ G + A +L
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 239 FDAMPERNIVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARL 298
FD MP+RN VSWN MIS ++R G A+ +FR M ++ + TMV++L AC
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 299 NEGRSVHGFMYRTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGH 358
+GR +H ++ R + + TAL+DMY KC + VF+ + L WN+M+LG
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 359 CLHGNPDDGLKLFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAG 418
+G + + LF E+ + + PD ++FIGVL ACA +G
Sbjct: 335 ANNGFEERAMDLFSELE---------------------RSGLEPDSVSFIGVLTACAHSG 394
Query: 419 LLKDANNYFNEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSV 478
+ A+ +F M +++ P+ HY + NV AGL+++A +++N+P ++ D+V
Sbjct: 395 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE-----DTV 454
Query: 479 VWINLLTMCRFVGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMK 538
+W +LL+ CR +G+V + ++ AK L L+P Y LL N YA G +E+ +LLMK
Sbjct: 455 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 508
Query: 539 EKRLGTMPGCRLVDLKEIVH 556
E+++ GC +++ VH
Sbjct: 515 ERQMEKEVGCSSIEVDFEVH 508
BLAST of Clc01G20800 vs. TAIR 10
Match:
AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 303.5 bits (776), Expect = 3.7e-82
Identity = 180/572 (31.47%), Postives = 290/572 (50.70%), Query Frame = 0
Query: 54 SLLQSCQSVRELLQIHGHLITSG-RFKHHFWANRVLFQASEFGDVI-YTVLVFRYINIPN 113
SLL SC+++R L QIHG I G +F +L A D + Y + P+
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69
Query: 114 TFCINRVIKAYSLSIVPLEAVSLYFEWLGNGF-RPDSYTFLSLFSACANFGCGASGRKCH 173
F N +++ YS S P +V+++ E + GF PDS++F + A NF +G + H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 174 GQAFKNGIDSVMVLRNSLIHMYGCCGHIELGRKVFDEMSSWDLVSWNSIVTAYARTGDLH 233
QA K+G++S + + +LI MYG CG +E RKVFDEM +LV+WN+++TA R D+
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 234 TAHDLFDAMPERNIVSWNLMISEYLRGGNPGCAMKL------------------------ 293
A ++FD M RN SWN+M++ Y++ G A ++
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 294 -------FRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRTSMKFCVFINTA 353
FR + G+ N ++ VL AC +S G+ +HGF+ + + V +N A
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 354 LVDMYSKCQRVSIARRVFDRML-SRNLVTWNAMVLGHCLHGNPDDGLKLFQEMAAKLREI 413
L+DMYS+C V +AR VF+ M R +V+W +M+ G +HG ++ ++LF EM A
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA----- 369
Query: 414 NGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDANNYFNEMINVFLVRPNFA 473
V PD I+FI +L AC+ AGL+++ +YF+EM V+ + P
Sbjct: 370 ----------------YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 429
Query: 474 HYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINLLTMCRFVGDVSLGEQIAK 533
HY C+ ++Y +G +Q+A + + +P ++VW LL C G++ L EQ+ +
Sbjct: 430 HYGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELAEQVKQ 489
Query: 534 YLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMPGCRLVDLKEIVHRLK 591
L +L+P N LL N YA AG+W+DV+ I+ M +R+ LV++ + +++
Sbjct: 490 RLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFT 549
BLAST of Clc01G20800 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 300.8 bits (769), Expect = 2.4e-81
Identity = 184/564 (32.62%), Postives = 292/564 (51.77%), Query Frame = 0
Query: 27 SSSPF--SSFPEPDLSLETT---NPPRHNRSYSLLQSCQSVRELLQIHGHLITSGRFKHH 86
+SSP +S P+ LS T P + L+ QSV E+LQIH ++ H
Sbjct: 2 ASSPLLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHP 61
Query: 87 FW--ANRVLFQA-SEFGDVIYTVLVFRYINIPNTFCINRVIKAYSLSIVPLEAVSLYFEW 146
+ N L +A + G + +++ +F P+ F I S++ + +A LY +
Sbjct: 62 RYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL 121
Query: 147 LGNGFRPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDSVMVLRNSLIHMYGCCGHI 206
L + P+ +TF SL +C+ SG+ H K G+ + L+ +Y G +
Sbjct: 122 LSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDV 181
Query: 207 ELGRKVFDEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMPERNIVSWNLMISEYLRGG 266
+KVFD M LVS +++T YA+ G++ A LFD+M ER+IVSWN+MI Y + G
Sbjct: 182 VSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 241
Query: 267 NPGCAMKLFRNMVNIG-IRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRTSMKFCVFIN 326
P A+ LF+ ++ G + + T+V L AC + L GR +H F+ + ++ V +
Sbjct: 242 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVC 301
Query: 327 TALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGNPDDGLKLFQEMAAKLRE 386
T L+DMYSKC + A VF+ +++V WNAM+ G+ +HG D L+LF EM
Sbjct: 302 TGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM------ 361
Query: 387 INGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDANNYFNEMINVFLVRPNF 446
+G + P ITFIG L ACA AGL+ + F M + ++P
Sbjct: 362 --------------QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKI 421
Query: 447 AHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINLLTMCRFVGDVSLGEQIA 506
HY CL ++ AG +++A E ++N+ D +DSV+W ++L C+ GD LG++IA
Sbjct: 422 EHYGCLVSLLGRAGQLKRAYETIKNMNMD-----ADSVLWSSVLGSCKLHGDFVLGKEIA 481
Query: 507 KYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMPGCRLVDLKEIVHRL 566
+YLI L KN Y LL NIYA G +E V++++ LMKEK + PG ++++ VH
Sbjct: 482 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 536
Query: 567 KLGNLLQDGMKETNTVMHKLASEV 582
+ G+ KE T++ K++ +
Sbjct: 542 RAGDREHSKSKEIYTMLRKISERI 536
BLAST of Clc01G20800 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 292.4 bits (747), Expect = 8.5e-79
Identity = 174/577 (30.16%), Postives = 293/577 (50.78%), Query Frame = 0
Query: 29 SPFSSFPEPDLSLETTNPPRHNRS-YSLLQSCQSVRELLQIHGHLITSGRFKHHFWANRV 88
+P + P + ++P H S + + +C+++R+L QIH I SG+ + A +
Sbjct: 2 NPTQTLFSPGGNSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEI 61
Query: 89 L-FQAS---EFGDVIYTVLVFRYINIPNTFCINRVIKAYSLS--IVPLEAVSLYFEWLGN 148
L F A+ D+ Y +F + N F N +I+ +S S L A++L++E + +
Sbjct: 62 LRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD 121
Query: 149 GF-RPDSYTFLSLFSACANFGCGASGRKCHGQAFKNGIDSVMVLRNSLIHMYGCCGHIEL 208
F P+ +TF S+ ACA G G++ HG A K G + ++L+ MY CG ++
Sbjct: 122 EFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKD 181
Query: 209 GRKVF--------------DEMSSWDLVSWNSIVTAYARTGDLHTAHDLFDAMPERNIVS 268
R +F ++V WN ++ Y R GD A LFD M +R++VS
Sbjct: 182 ARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVS 241
Query: 269 WNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMY 328
WN MIS Y G A+++FR M IR N T+V+VL A R L G +H +
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE 301
Query: 329 RTSMKFCVFINTALVDMYSKCQRVSIARRVFDRMLSRNLVTWNAMVLGHCLHGNPDDGLK 388
+ ++ + +AL+DMYSKC + A VF+R+ N++TW+AM+ G +HG D +
Sbjct: 302 DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
Query: 389 LFQEMAAKLREINGEIGNGKKFKQDEGKRNVYPDQITFIGVLCACARAGLLKDANNYFNE 448
F +M + V P + +I +L AC+ GL+++ YF++
Sbjct: 362 CFCKMR---------------------QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 421
Query: 449 MINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNVPEDDEDFSSDSVVWINLLTMCRF 508
M++V + P HY C+ ++ +GL+ +A E + N+P D V+W LL CR
Sbjct: 422 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP-----IKPDDVIWKALLGACRM 481
Query: 509 VGDVSLGEQIAKYLIDLEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLGTMPGCR 568
G+V +G+++A L+D+ P + Y L N+YA G W +VS ++L MKEK + PGC
Sbjct: 482 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 541
Query: 569 LVDLKEIVHRLKLGNLLQDGMKETNTVMHKLASEVSL 584
L+D+ ++H + + KE N+++ +++ ++ L
Sbjct: 542 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882774.1 | 0.0e+00 | 91.44 | pentatricopeptide repeat-containing protein At3g51320 [Benincasa hispida] | [more] |
XP_023544620.1 | 4.6e-310 | 85.91 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo... | [more] |
XP_022950690.1 | 1.0e-307 | 85.57 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita mosc... | [more] |
KAG6603895.1 | 3.8e-307 | 85.57 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022978359.1 | 4.4e-303 | 84.90 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita maxi... | [more] |
Match Name | E-value | Identity | Description | |
Q0WVU0 | 1.1e-150 | 49.80 | Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX... | [more] |
Q9SJG6 | 4.7e-82 | 33.40 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Q9CA54 | 5.2e-81 | 31.47 | Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 3.4e-80 | 32.62 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Q9FI80 | 1.2e-77 | 30.16 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GGG4 | 4.9e-308 | 85.57 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1ITV7 | 2.1e-303 | 84.90 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita ma... | [more] |
A0A1S4DTP8 | 1.1e-302 | 87.48 | pentatricopeptide repeat-containing protein At3g51320 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3CKW6 | 1.4e-302 | 87.48 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0KMJ6 | 4.0e-302 | 86.96 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507160 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G51320.1 | 7.5e-152 | 49.80 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G42920.1 | 3.3e-83 | 33.40 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G74630.1 | 3.7e-82 | 31.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37380.1 | 2.4e-81 | 32.62 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G48910.1 | 8.5e-79 | 30.16 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |