Clc01G19480 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G19480
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	homeobox-leucine zipper protein ATHB-40
Location	ClcChr01: 31743520 .. 31748538 (+)
RNA-Seq Expression	Clc01G19480
Synteny	Clc01G19480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTAAACCCATTCCCCCAAACTTCTCAAACCAATCCACAAACCCCCCCCCCCCCCAAAAAAAAAAAAAAGCTTCACCGCCGGTGACAATGGCGGCCATGAATCTCCGACCCGACGGCGACAATTCACAACTCATTTCCCATCTCTACAACCCTGAAATTTACACCCAAATGTTACCCCAACAAGGTAACTAATTTTTTAAAATTTTCCATCTCTAACCTATTTACTTAAAAAATCCTTTTATTAATATTTTTAAAATATTTGTTTTTCAGGTACGGCGGAGGGGAATAAGCCGCCGAAGCGGCGGAGGAGGAGGAGCAAAGCGAAGGAGGGGGGCGGAGCCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATAAATTTTGGCAACGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGGCAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAATAAGAAGCTGGAAGAGGAATATTCTACTCTTAAAAAAGCTCATGATTCTGTTCTTCTCCAAAATTCCCATCTTGAATCTGAGGTTAGTTATTATAATTTTTCAACTTTTCCTTTTTCTTTTTTGGTATATTTTTCTTTTTTTTTTTGAATTATTCATCAAACTTTTACTTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTCAAATTTTCGTACGGTCCTAGAGTTATTGTTGTTTGACCTTATCGTTAAATCTCTAATACTAAAAATGAACTAGCTTTTGATTTGCTTATCTAGTAAGAAATGAACAAACTATGGTAATAAAATAACAATGTTTTCGTATGTTTTTTTTTCCCCTTTTTGAAAGGAATAAAAAGAAGAACGTGCATGAGCTCTTGGCTCGAAGAATATGATGCCACCTTATAGGGTTTGGAATTTGTAAAATAATAATAATAATAATATAATCAATTTCTTCCTAAAACAATTATTTTTTCCATTAACGTACAGTTTACTGCCATCTGAGGCAACTACAATTGGGATAACAATTTCTCTCTATCTCTTTGCAGAATGTTCCGTACACTGGTTACCTTGGTGTATTTTGGGTTATAACTATTTTAGTATAGTACATTTAAGTATTTAAAGACAAGTTTTCACGTGACAAATTTTTCTTTTTCAAACAATATATTTTTTTTACTTTTTAATTGAAATAGATGCATAAAGATAAATGCAGTTCTAGTTCACTCTAGTATCACCACAAAAATATTTAAGAAGCAATAAAAGAAATATTTTTAAAAAAGCTTTTCATATGGCAAACTATTATTAAACTATTGAGTAGACTGCACTCATCTTTTTACAACTCACCAGTTCTGAATGGACTAGAAAATGATGGGTATAATTCAAAATGCACTCAAGTGTTAGAATAATTTTAGCATTTAATGTTTGGAAAGTAACATAATTTGTTGGGAAAAAAACTCCTACTATTATTGTAGAGAATAACCAGAAAAATAATTGTAAATGAAAAGAAAGCAATAAAACTGATAATACAAAAATCAACTTGAAAAACTCCAAAAAAAAAAAAGAAAAAAGATTAATTATGCGAAAAATGATCACAATCACACATAAATCTCTCCTTGGCCCAAGTTACAAGAATACTCTCTCAAACCATTATACCACTCACATAACTAAAATATATTTTAGTGTTTGGAGGGTTTGTACTTTTAATTATTTGTGAAAACCCATTAAGATTATCTATTTTATTAAACATTGGTATATATATATTTATTGAGGATTGATTAGTTTTTTGTTTGGTTGAATTTAGTTGGTGAAAGTGAAGGAGCAATTGAAAGAAGCAAAAAATGAAATAAAAAAATTGGGAGAAGGAAGCGAGAGAATTTCAAGCAATAACAGTCCGAGCTCTTCGGTAACAATGGAAGCAGTGGAAGCAGTGCCTTTGGGAGAGCTATTTTTGGAAGAATATGAAGATGTATTCTATTGCATGCAAGACAACAATTACAATCAAGGAATGGACTGGCTTAATCTTAATTATATGTAGATTAATTTACATATATTTATTATCTTCACTAATTAATTACTATTTAGTTTGTGGATATAGTGATCATAGATTAGATCTAATGTACATTTCTCTCTTTCTTTCTCTCTCTCTAACTAGTCTTATTTTTCAGAACTTTGAATTAATTAAGATATATATAATTAAATGTGTTATTATTAACTTTTTTCTTTTTCTGGTACATGTGCTTCTCATTTAACTATATCCAACTTGTGGAAGTACTTTTGTTTATTTCTAAAAGAAAAGCCAAACCCAAAATATACGCAATAAAAATTTATCTTAAGCTGATAAACCCCATTTTGATTAATCATTTGTTTTTTCTTAATATATATATATATATATATATATATATATATATATATATATATATATTTAACTGAATTGAAAGTATGAATTTACTTAGTCCTTACACTTTAAAAGTTATTTTAGGTCCTTTTAAGTAAACAATATTAATTAATTTATTAGATAAAAATTTATATTTTAGATATATAGTAAAATCCTAAACTTTTAATTGTGTCTTTTGAGATTTGTGATTTGTTTTCTTAGAGTAAAAAAATATGGAATAGGTAAAATTTCACAAATTTTTCTTTTCTTTTTTTTTTTTTTTGGACAAAATAGAAGTACAATTAAAATTTAAGAATCTATTAATTACAAAGTTAAAGTTATTACCCTTTTGAGAACTAAAAAGTGAAATTGTAATTCCAAATTCTTTTAAAAAATGAAGTGAAAAAACATTGAAGAGTGAACATATTGAGAGATGTCCACACCTCAATGCTGTTGGGCTTTGGGCCTTTCATGGATTTTGAGCTCGGCCTGCCTACTGTTGATGGGCCTTTAACATTGGTCCATTTGTTGTATAATAATTTAAACAGAAATATGGAAATTAAATATTAAGTATTTAAGGGAGGAAAAAGAAAAGGCAATTCCGGTAAAAATAAATAAATAAATAAATAAATAAACGTAATGGAGATTGTTTATATATTCATTATCCTAATCTATTCTGATCCAATAGAGGATAAATCCATAACAAATTAATGCGTGTTGAATAACATAAAGTGCAGCCCACAGTAACATTGACAATGCCAATCAGCAAATATTACAACAATGTCAAAATAACCATACGGTTTCTGAAAACCCCATTGATAAGAAAAATGCCAAATACCATGTCAATTTTTCTTTCTTTCTTCTCATTCTTTAAGTTTTAAAATTATGTGGATAGAAAAATCGAACATCTTATCTCTTAGTTGAAAATTCATATTTAGGGCTAATTAAGCTATGTTCGTTTTGACTATATTGAATCTAATTTTAATTACAACGATTTTCTACATCTATATACCAACTTAATAATAAAATGAAACTTGTTGAAATTTTAAATTTGTTCTTATAAATTATTATGTGGACTTACATTTGTGACCCAAAACACTTATTAAAATTAAATGTGGTAAAAATTGAACCTAACTAATGTTTTAGTAACTAACTTCCATAATGATGATTTTTTTTAATTATAAAAGAATGTGGATGTTGTAGATGCAAGTTTGAAAGTTGAATAATTTTGTTAATATTTCATTAATCTACAATCTTAATTTATCAATATAGTAAAATGTCATTGTCTATTAGTGATAGATACATAATATTGATGACAGTCACATTTTACTATATTTAAAAATATTTTAAAGTCTTGCCATTTAAAACGATTGTTCCTATTCCAAATCATAATTTGCTAAAAAGCTATTCTTTTTAGTTAATGTATCTTTCTCTCCTTATTATATTGTTTATTATTTTCTACTGTGACTAAGACCACTCTCAAAACGTCTTGTTAAAAATTAAAGAGTACTTTCAACTATATTAACATGAGCTAAATTATTTACAAATATAGAAAAAATTCACTGTATATTGGTGATAGACTTCTATCACTAGTTTGATATCTTTTCTATTTATAACAATTTTTCAACATTAAATAAGTTTTTCCCCTTTGAATAATAATAAGGTCAAGTTAGGCGTTTTGAAGCAAGTTGCCATAAATAGCACTTCCCGTGCATTACTAATAACATAGAAAGTCAAGGCTCTTCTCGTCGAGAGTAGGTTATTTTCAGATACAAAAAAGAAAATATCAACATTCAATACCTCTTCTGACTTTTCGTTTTCTAACAGAAATTACATATTTCCTCAGCCTCTGATCCAAGTGCCATTTCATGTATTGGTTATGGGTATATAACGCAGCTTGAATAGTAAAGTCTTGTGCTATGAACGCATAAGCAGGTAAAGAGTACATGTGTTGAGCTACCAAGGAAGTAATAACTCCTAAAGAGGCTAAAGCAAGACCTAACTGAAAATAAAGCAAATTATTGATTGTGTCACAAAGACCTTTATGTCGCATTCCAATCGTCTCCGGACAGAATATGTGCTTCTAAAAGATCTTTTATATGGTGTAAATTTATGTATATTATTTAAATAAATAAAAAAATGCAATTCAATTTTAAATAAAAGAATTTCTAGAATCTCAAAGTTAGTTCCCTCTATCTTGAATACCTGCGCTTACTGATTCAATTACAAGTGGTGGTTGACTCTTGATTCAATTCATTGCACTGCTATCCCATTCCCCTAAGAGCAAAGATAGACAATTATAAACTAATTCAAAATAGAAAAATATAAACATATTGTCACGTTTATATTTACGATCACTAAAATGATTTTGAGCGAACGACAAGTCGTGTCTCCCATTCGGCGATTACGTGGGACCCACCGTACGGACTTCCCCACGAAAACGTCCAAAATTTTCCCGAATATTTCCGTATTACCAGAGTCACACTCTCCTACATCACTTCCTTTTCGACTCCACGTGAGTCCACCAATCACCATCGGATTTTTTAATCACTCGACACGTGGCAACATCGAACCAATTGTATGTGCAGCCGCCGTCGCAGTGTAA

mRNA sequence

GGTGTAAACCCATTCCCCCAAACTTCTCAAACCAATCCACAAACCCCCCCCCCCCCCAAAAAAAAAAAAAAGCTTCACCGCCGGTGACAATGGCGGCCATGAATCTCCGACCCGACGGCGACAATTCACAACTCATTTCCCATCTCTACAACCCTGAAATTTACACCCAAATGTTACCCCAACAAGGTACGGCGGAGGGGAATAAGCCGCCGAAGCGGCGGAGGAGGAGGAGCAAAGCGAAGGAGGGGGGCGGAGCCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATAAATTTTGGCAACGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGGCAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAATAAGAAGCTGGAAGAGGAATATTCTACTCTTAAAAAAGCTCATGATTCTGTTCTTCTCCAAAATTCCCATCTTGAATCTGAGTTGGTGAAAGTGAAGGAGCAATTGAAAGAAGCAAAAAATGAAATAAAAAAATTGGGAGAAGGAAGCGAGAGAATTTCAAGCAATAACAGTCCGAGCTCTTCGGTAACAATGGAAGCAGTGGAAGCAGTGCCTTTGGGAGAGCTATTTTTGGAAGAATATGAAGATGTATTCTATTGCATGCAAGACAACAATTACAATCAAGGAATGGACTGGCTTAATCTTAATTATATTCGTGTCTCCCATTCGGCGATTACGTGGGACCCACCGTACGGACTTCCCCACGAAAACGTCCAAAATTTTCCCGAATATTTCCGTATTACCAGAGTCACACTCTCCTACATCACTTCCTTTTCGACTCCACCCGCCGTCGCAGTGTAA

Coding sequence (CDS)

ATGGCGGCCATGAATCTCCGACCCGACGGCGACAATTCACAACTCATTTCCCATCTCTACAACCCTGAAATTTACACCCAAATGTTACCCCAACAAGGTACGGCGGAGGGGAATAAGCCGCCGAAGCGGCGGAGGAGGAGGAGCAAAGCGAAGGAGGGGGGCGGAGCCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATAAATTTTGGCAACGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGGCAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAATAAGAAGCTGGAAGAGGAATATTCTACTCTTAAAAAAGCTCATGATTCTGTTCTTCTCCAAAATTCCCATCTTGAATCTGAGTTGGTGAAAGTGAAGGAGCAATTGAAAGAAGCAAAAAATGAAATAAAAAAATTGGGAGAAGGAAGCGAGAGAATTTCAAGCAATAACAGTCCGAGCTCTTCGGTAACAATGGAAGCAGTGGAAGCAGTGCCTTTGGGAGAGCTATTTTTGGAAGAATATGAAGATGTATTCTATTGCATGCAAGACAACAATTACAATCAAGGAATGGACTGGCTTAATCTTAATTATATTCGTGTCTCCCATTCGGCGATTACGTGGGACCCACCGTACGGACTTCCCCACGAAAACGTCCAAAATTTTCCCGAATATTTCCGTATTACCAGAGTCACACTCTCCTACATCACTTCCTTTTCGACTCCACCCGCCGTCGCAGTGTAA

Protein sequence

MAAMNLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAVEAVPLGELFLEEYEDVFYCMQDNNYNQGMDWLNLNYIRVSHSAITWDPPYGLPHENVQNFPEYFRITRVTLSYITSFSTPPAVAV

Homology

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BLAST of Clc01G19480 vs. NCBI nr
Match: XP_038883125.1 (LOW QUALITY PROTEIN: homeobox-leucine zipper protein ATHB-40 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 3.6e-95
Identity = 188/222 (84.68%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MAAMNLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAG 60
           MAA+NLRPDGDNS LISHLYNPEIYTQMLPQQ TAEGNKP KRRR   +++EGGGAGAAG
Sbjct: 1   MAAVNLRPDGDNSLLISHLYNPEIYTQMLPQQDTAEGNKPTKRRREEEQSEEGGGAGAAG 60

Query: 61  LKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 120
            ++  LSSEQVKLLE+ F +EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK+E
Sbjct: 61  XRRGSLSSEQVKLLEMXFWSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKME 120

Query: 121 EEYSTLKKAHDSVLL-QNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVT 180
           EEYSTLKKAHDS+   Q SHLESE+VK+KEQL EAKNEIKKL EGSERISSNNSPSSSVT
Sbjct: 121 EEYSTLKKAHDSLFFXQKSHLESEMVKLKEQLAEAKNEIKKLVEGSERISSNNSPSSSVT 180

Query: 181 MEAV-EAVPLGELFLEEYEDVFYCMQDNNYNQGMDWLNLNYI 221
           MEA+ EAVPLGELFLEEYEDVFYCMQ++NYNQGMDWLNLNY+
Sbjct: 181 MEAMEEAVPLGELFLEEYEDVFYCMQEHNYNQGMDWLNLNYM 222

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BLAST of Clc01G19480 vs. NCBI nr
Match: XP_004143500.1 (homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetical protein Csa_003879 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.0e-94
Identity = 193/226 (85.40%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MAAMNLRPDGDNSQLISHLYNPEIYT-QMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAA 60
           MAA+NLRPD DNS L+SHLYNPE+YT Q+LPQQGT EG+KP KRRRRRSKAKEGG  GAA
Sbjct: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGG--GAA 60

Query: 61  GLKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 120
           GLKKRKLSSEQVKLLE+NFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL
Sbjct: 61  GLKKRKLSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 120

Query: 121 EEEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSE-RISSNNSPSSSV 180
           EEEYSTLKKAHDSV+LQ SHLESEL+KVKEQLKEAKNEI+K+ EGSE R +S+NSPSSSV
Sbjct: 121 EEEYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSV 180

Query: 181 TMEAVE---AVPLGELFLEEYEDVFYCMQDNNYNQGMDW-LNLNYI 221
           TMEAVE    VPLGELF EEYEDVFYCMQDNNYNQG++W LNLN++
Sbjct: 181 TMEAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 224

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BLAST of Clc01G19480 vs. NCBI nr
Match: XP_008441120.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 4.1e-91
Identity = 187/214 (87.38%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 12  NSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSSEQV 71
           NS L SHLYNPE+YTQ+LPQQGT EGNKP KRRRRRSKAKEGGG GA  LKKRKLSSEQV
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPTKRRRRRSKAKEGGG-GAGSLKKRKLSSEQV 72

Query: 72  KLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 131
           KLLE+NFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 73  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 132

Query: 132 SVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSE-RISSNNSPSSSVTMEAVE---AVP 191
           SVLLQ SHLESELVKVKEQLKEAKNEI+K+ EGSE R +S+NSPSSSVTMEAVE    VP
Sbjct: 133 SVLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 192

Query: 192 LGELFLEEYEDVFYCMQDNNYNQGMDW-LNLNYI 221
           LGELF EEYEDVFYCMQDNNYNQG+DW LNLN++
Sbjct: 193 LGELFFEEYEDVFYCMQDNNYNQGLDWALNLNFM 225

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BLAST of Clc01G19480 vs. NCBI nr
Match: XP_023518445.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 4.7e-79
Identity = 167/213 (78.40%), Postives = 187/213 (87.79%), Query Frame = 0


Query: 9   DGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSS 68
           D DN+ LIS+LY+P +YTQ+LPQQG AEGNKP KRRRRRSKAKE   AGAAGLKKRKLS+
Sbjct: 5   DDDNTLLISNLYSPGVYTQILPQQGAAEGNKPTKRRRRRSKAKE--AAGAAGLKKRKLST 64

Query: 69  EQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 128
           EQVKLLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK
Sbjct: 65  EQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 124

Query: 129 AHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAV--EAV 188
           AHDS++LQNSHLE E+ K+ EQL+EAKNEI++L EGSE+I S NSP+SS TM+AV   A 
Sbjct: 125 AHDSIILQNSHLEYEMTKLSEQLREAKNEIQRLVEGSEKIWS-NSPTSSETMDAVPPPAP 184

Query: 189 PLGELFLEEYEDVFYCMQD--NNYNQGMDWLNL 218
             GELFL EYEDVFYCMQ    NY+QGM+WLNL
Sbjct: 185 SWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNL 214

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BLAST of Clc01G19480 vs. NCBI nr
Match: KAG7026804.1 (Homeobox-leucine zipper protein ATHB-21 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.8 bits (774), Expect = 3.0e-78
Identity = 167/213 (78.40%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 9   DGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSS 68
           D D++ LIS+LY+P ++TQ+LPQQG AEGNKP KRRRRRSKAKE    GAAGLKKRKLS+
Sbjct: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKE--ATGAAGLKKRKLST 64

Query: 69  EQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 128
           EQVKLLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK
Sbjct: 65  EQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 124

Query: 129 AHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAV-EAVP 188
           AHDS+LLQNSHLESE+ K+ EQL+EAKNEI++L EGSE+I S NSP+SS TM+AV   VP
Sbjct: 125 AHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWS-NSPTSSETMDAVPPPVP 184

Query: 189 -LGELFLEEYEDVFYCMQD--NNYNQGMDWLNL 218
             GELFL EYEDVFYCMQ    NY+QGM+WLNL
Sbjct: 185 SWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNL 214

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BLAST of Clc01G19480 vs. ExPASy Swiss-Prot
Match: O23208 (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 1.5e-48
Identity = 113/219 (51.60%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 4   MNLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGL-K 63
           MN   D  N   IS LY P++YTQ++ Q G     K PKRRR+++K       G  GL +
Sbjct: 1   MNYTVDDQNMAFISQLY-PDVYTQIV-QPGEV---KQPKRRRKKTKGSVASADGGNGLFR 60

Query: 64  KRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEE 123
           KRKL+ EQV +LE++FG+EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEE
Sbjct: 61  KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 120

Query: 124 YSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEA 183
           Y+ LK +HD+V++    LESE++++KEQL +A+ EI++L E  E  SSN+  SSSV++EA
Sbjct: 121 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISSSVSVEA 180

Query: 184 VEAVPLGELFL----EEYEDVFYCMQDNNYNQGMDWLNL 218
            E    G+  +    ++Y+ +FY + +N+Y    +W++L
Sbjct: 181 NETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSL 214

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BLAST of Clc01G19480 vs. ExPASy Swiss-Prot
Match: Q9ZU70 (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.3e-46
Identity = 112/222 (50.45%), Postives = 150/222 (67.57%), Query Frame = 0


Query: 5   NLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSK----AKEGGGAGAAG 64
           N   D  N  LIS LY P +YT ++PQQG     KP +RR+R+SK    A+EG   G   
Sbjct: 3   NQNVDDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGW 62

Query: 65  LKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 124
            +KRKLS EQV++LEI+F ++HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E
Sbjct: 63  FRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVE 122

Query: 125 EEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTM 184
           +EY+ LK A+++ +++   L+SE++ +KEQL EA+ EI++L +  E   SN+  SSSVT+
Sbjct: 123 DEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTI 182

Query: 185 EAVEAVPLGELFLEEYEDVFYCMQDNN------YNQGMDWLN 217
           EA    P    F  +Y+  F    D N      Y  G+DW++
Sbjct: 183 EANHTTP----FFGDYDIGFDGEADENLLYSPDYIDGLDWMS 217

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BLAST of Clc01G19480 vs. ExPASy Swiss-Prot
Match: Q9LVR0 (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-40
Identity = 103/191 (53.93%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 36  EGNKPPKRRRRR-----SKAKEGGGAGAAG-LKKRKLSSEQVKLLEINFGNEHKLESERK 95
           E +KP KRRR+R     S   E   A   G L+KRKL+ EQV +LE +FGNEHKLES RK
Sbjct: 39  EESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRK 98

Query: 96  DRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSVLLQNSHLESELVKVKE 155
           +++A ELGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  HD+V+L    LES+++K+ E
Sbjct: 99  EKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTE 158

Query: 156 QLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAVEAVPLGELFLEEYEDVFYCMQDNNYN 215
           QL EA++EI+KL E  E + +N+S SSS+++EA  A    EL  E   ++ + M DNNY 
Sbjct: 159 QLSEAQSEIRKLSERLEEMPTNSS-SSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYL 218

Query: 216 QGMDWLNLNYI 221
           Q M++ +  Y+
Sbjct: 219 QSMEYWDGLYV 228

[Close]

BLAST of Clc01G19480 vs. ExPASy Swiss-Prot
Match: A2YN17 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 75/140 (53.57%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 28  MLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAG------LKKRKLSSEQVKLLEINFGNE 87
           +L   G  +G +P  RRRRR  A+  GG G  G       KKR+LS EQV++LE++F  E
Sbjct: 22  LLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREE 81

Query: 88  HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSVLLQNSHLE 147
            KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK AHD+ +L   HLE
Sbjct: 82  RKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLE 141

Query: 148 SELVKVKEQLKEAKNEIKKL 162
           +E++++KE+L  A+ E+++L
Sbjct: 142 NEVLRLKERLVVAEEEVRRL 161

[Close]

BLAST of Clc01G19480 vs. ExPASy Swiss-Prot
Match: Q7XI85 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 90/215 (41.86%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 28  MLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAG------LKKRKLSSEQVKLLEINFGNE 87
           +L   G  +G +P  RRRRR  A+  GG G  G       KKR+LS EQV++LE++F  E
Sbjct: 22  LLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREE 81

Query: 88  HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSVLLQNSHLE 147
            KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK AHD+ +L   HLE
Sbjct: 82  RKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLE 141

Query: 148 SELVKVKEQLKEAKNEIKKL----------GEGSERISSN-------NSPSSSVTMEAVE 207
           +E++++KE+L  A+ E+++L          GEG + +           SPSSS +    +
Sbjct: 142 NEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPSSSFSTGTCQ 201

Query: 208 AVPLGELFLEEYEDVFYCMQDNNY--NQGMDWLNL 218
               G       +D+ Y  +   Y  N  ++W +L
Sbjct: 202 PPSFGGGDHLGDDDLVYVPEYGGYADNSVVEWFSL 236

[Close]

BLAST of Clc01G19480 vs. ExPASy TrEMBL
Match: A0A0A0KGE8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 5.0e-95
Identity = 193/226 (85.40%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MAAMNLRPDGDNSQLISHLYNPEIYT-QMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAA 60
           MAA+NLRPD DNS L+SHLYNPE+YT Q+LPQQGT EG+KP KRRRRRSKAKEGG  GAA
Sbjct: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGG--GAA 60

Query: 61  GLKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 120
           GLKKRKLSSEQVKLLE+NFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL
Sbjct: 61  GLKKRKLSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 120

Query: 121 EEEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSE-RISSNNSPSSSV 180
           EEEYSTLKKAHDSV+LQ SHLESEL+KVKEQLKEAKNEI+K+ EGSE R +S+NSPSSSV
Sbjct: 121 EEEYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSV 180

Query: 181 TMEAVE---AVPLGELFLEEYEDVFYCMQDNNYNQGMDW-LNLNYI 221
           TMEAVE    VPLGELF EEYEDVFYCMQDNNYNQG++W LNLN++
Sbjct: 181 TMEAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 224

[Close]

BLAST of Clc01G19480 vs. ExPASy TrEMBL
Match: A0A1S3B2Q4 (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.0e-91
Identity = 187/214 (87.38%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 12  NSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSSEQV 71
           NS L SHLYNPE+YTQ+LPQQGT EGNKP KRRRRRSKAKEGGG GA  LKKRKLSSEQV
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPTKRRRRRSKAKEGGG-GAGSLKKRKLSSEQV 72

Query: 72  KLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 131
           KLLE+NFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 73  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 132

Query: 132 SVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSE-RISSNNSPSSSVTMEAVE---AVP 191
           SVLLQ SHLESELVKVKEQLKEAKNEI+K+ EGSE R +S+NSPSSSVTMEAVE    VP
Sbjct: 133 SVLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 192

Query: 192 LGELFLEEYEDVFYCMQDNNYNQGMDW-LNLNYI 221
           LGELF EEYEDVFYCMQDNNYNQG+DW LNLN++
Sbjct: 193 LGELFFEEYEDVFYCMQDNNYNQGLDWALNLNFM 225

[Close]

BLAST of Clc01G19480 vs. ExPASy TrEMBL
Match: A0A6J1KN43 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC111496798 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.3e-78
Identity = 166/211 (78.67%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 11  DNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSSEQ 70
           DN+ LIS+LY+P +YTQ+L QQG AEGNKP KRRRRRSKAKE   AG AGLKKRKLS+EQ
Sbjct: 7   DNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKE--AAGVAGLKKRKLSTEQ 66

Query: 71  VKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH 130
           VKLLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH
Sbjct: 67  VKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH 126

Query: 131 DSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAVE--AVPL 190
           DS+LLQNSHLESE+VK+ EQL+EAKNEI++L EGSE+I S NSP+SS TM+ V   A   
Sbjct: 127 DSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWS-NSPTSSETMDTVPPLAPSW 186

Query: 191 GELFLEEYEDVFYCMQD--NNYNQGMDWLNL 218
           GELFL EYEDVFYCMQ    NY+QGM+WLNL
Sbjct: 187 GELFLGEYEDVFYCMQQQHGNYSQGMEWLNL 214

[Close]

BLAST of Clc01G19480 vs. ExPASy TrEMBL
Match: A0A6J1HF68 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111463411 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.1e-77
Identity = 165/213 (77.46%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 9   DGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGLKKRKLSS 68
           D DN+ L+S+LY+P ++TQ+L QQG AEGNKP KRRRRRSKAKE   AGAAGLKKRKLS+
Sbjct: 5   DDDNTLLMSNLYSPGVFTQILTQQGAAEGNKPTKRRRRRSKAKE--AAGAAGLKKRKLST 64

Query: 69  EQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 128
           EQVKLLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK
Sbjct: 65  EQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 124

Query: 129 AHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAV-EAVP 188
           AHDS+LLQNSHLESE+ K+ EQL+EAKNEI++L EGSE+I S +SP+SS TM+A+   VP
Sbjct: 125 AHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWS-SSPTSSETMDAMPPPVP 184

Query: 189 -LGELFLEEYEDVFYCMQD--NNYNQGMDWLNL 218
             GELFL EYEDVFYCMQ    NY+QGM+WLNL
Sbjct: 185 SWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNL 214

[Close]

BLAST of Clc01G19480 vs. ExPASy TrEMBL
Match: A0A6J1GFW2 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111453582 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.6e-77
Identity = 163/225 (72.44%), Postives = 189/225 (84.00%), Query Frame = 0


Query: 1   MAAMNLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAG 60
           MAA+NLRPD DNS LISHLYNPEIYTQMLPQQGTAEGNKP KRRRRRS+AKE   A AAG
Sbjct: 1   MAAVNLRPDDDNSTLISHLYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRAKEVAEA-AAG 60

Query: 61  LKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 120
           LKKRKLSSEQVKLLE+NFGNEHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE
Sbjct: 61  LKKRKLSSEQVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLE 120

Query: 121 EEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTM 180
            +YS LKKAHDS +LQ +HL+SE+ K+KEQL EAKNEI+KL E SER     +   SVTM
Sbjct: 121 HQYSMLKKAHDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSER-----NRRWSVTM 180

Query: 181 EAVEAVPL-GELFLEEYEDVFYCMQDNNYNQGMDWLNLNYIRVSH 225
           + V+A    GE+ +EEYEDVFY MQ+NNYN+ ++W  LNY+  ++
Sbjct: 181 DDVQAAACWGEILMEEYEDVFYSMQENNYNEPVEWY-LNYMYTNY 218

[Close]

BLAST of Clc01G19480 vs. TAIR 10
Match: AT4G36740.1 (homeobox protein 40 )

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-49
Identity = 113/219 (51.60%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 4   MNLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSKAKEGGGAGAAGL-K 63
           MN   D  N   IS LY P++YTQ++ Q G     K PKRRR+++K       G  GL +
Sbjct: 1   MNYTVDDQNMAFISQLY-PDVYTQIV-QPGEV---KQPKRRRKKTKGSVASADGGNGLFR 60

Query: 64  KRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEE 123
           KRKL+ EQV +LE++FG+EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEE
Sbjct: 61  KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 120

Query: 124 YSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTMEA 183
           Y+ LK +HD+V++    LESE++++KEQL +A+ EI++L E  E  SSN+  SSSV++EA
Sbjct: 121 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISSSVSVEA 180

Query: 184 VEAVPLGELFL----EEYEDVFYCMQDNNYNQGMDWLNL 218
            E    G+  +    ++Y+ +FY + +N+Y    +W++L
Sbjct: 181 NETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSL 214

[Close]

BLAST of Clc01G19480 vs. TAIR 10
Match: AT2G18550.1 (homeobox protein 21 )

HSP 1 Score: 185.3 bits (469), Expect = 6.6e-47
Identity = 112/222 (50.45%), Postives = 150/222 (67.57%), Query Frame = 0


Query: 5   NLRPDGDNSQLISHLYNPEIYTQMLPQQGTAEGNKPPKRRRRRSK----AKEGGGAGAAG 64
           N   D  N  LIS LY P +YT ++PQQG     KP +RR+R+SK    A+EG   G   
Sbjct: 3   NQNVDDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGW 62

Query: 65  LKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 124
            +KRKLS EQV++LEI+F ++HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E
Sbjct: 63  FRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVE 122

Query: 125 EEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKNEIKKLGEGSERISSNNSPSSSVTM 184
           +EY+ LK A+++ +++   L+SE++ +KEQL EA+ EI++L +  E   SN+  SSSVT+
Sbjct: 123 DEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTI 182

Query: 185 EAVEAVPLGELFLEEYEDVFYCMQDNN------YNQGMDWLN 217
           EA    P    F  +Y+  F    D N      Y  G+DW++
Sbjct: 183 EANHTTP----FFGDYDIGFDGEADENLLYSPDYIDGLDWMS 217

[Close]

BLAST of Clc01G19480 vs. TAIR 10
Match: AT5G66700.1 (homeobox 53 )

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-41
Identity = 103/191 (53.93%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 36  EGNKPPKRRRRR-----SKAKEGGGAGAAG-LKKRKLSSEQVKLLEINFGNEHKLESERK 95
           E +KP KRRR+R     S   E   A   G L+KRKL+ EQV +LE +FGNEHKLES RK
Sbjct: 39  EESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRK 98

Query: 96  DRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSVLLQNSHLESELVKVKE 155
           +++A ELGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  HD+V+L    LES+++K+ E
Sbjct: 99  EKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTE 158

Query: 156 QLKEAKNEIKKLGEGSERISSNNSPSSSVTMEAVEAVPLGELFLEEYEDVFYCMQDNNYN 215
           QL EA++EI+KL E  E + +N+S SSS+++EA  A    EL  E   ++ + M DNNY 
Sbjct: 159 QLSEAQSEIRKLSERLEEMPTNSS-SSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYL 218

Query: 216 QGMDWLNLNYI 221
           Q M++ +  Y+
Sbjct: 219 QSMEYWDGLYV 228

[Close]

BLAST of Clc01G19480 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-21
Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 60  GLKKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 119
           G KKR+L+ EQVK LE NF   +KLE ERK +LA  LGL PRQ+A+WFQNRRARWK K+L
Sbjct: 83  GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQL 142

Query: 120 EEEYSTLKKAHDSVLLQNSHLESELVKVKEQLKEAKN----EIKKLGEGSERISSNNSPS 178
           E++Y TLK+  D++  +N  L++   K++ ++   KN    E   L + +E   SN S +
Sbjct: 143 EKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDN 202

[Close]

BLAST of Clc01G19480 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-21
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 62  KKRKLSSEQVKLLEINFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 121
           KKR+L++EQV LLE +F  E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 122 EYSTLKKA-------HDSVLLQNSHLESELVKVKEQL---KEAKNE 158
           +Y  LK         +DS+++ N  L SE+  + E+L   +E  NE
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANE 173

The following BLAST results are available for this feature:

BLAST of Clc01G19480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883125.1	3.6e-95	84.68	LOW QUALITY PROTEIN: homeobox-leucine zipper protein ATHB-40 [Benincasa hispida]	[more]
XP_004143500.1	1.0e-94	85.40	homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetic...	[more]
XP_008441120.1	4.1e-91	87.38	PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo]	[more]
XP_023518445.1	4.7e-79	78.40	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
KAG7026804.1	3.0e-78	78.40	Homeobox-leucine zipper protein ATHB-21 [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Clc01G19480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23208	1.5e-48	51.60	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9ZU70	9.3e-46	50.45	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9LVR0	3.4e-40	53.93	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2YN17	1.2e-29	53.57	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q7XI85	1.2e-29	41.86	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Clc01G19480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGE8	5.0e-95	85.40	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE...	[more]
A0A1S3B2Q4	2.0e-91	87.38	homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 ...	[more]
A0A6J1KN43	3.3e-78	78.67	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1HF68	2.1e-77	77.46	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1GFW2	3.6e-77	72.44	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Clc01G19480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36740.1	1.1e-49	51.60	homeobox protein 40	[more]
AT2G18550.1	6.6e-47	50.45	homeobox protein 21	[more]
AT5G66700.1	2.4e-41	53.93	homeobox 53	[more]
AT1G69780.1	8.1e-21	48.36	Homeobox-leucine zipper protein family	[more]
AT3G01470.1	8.1e-21	52.83	homeobox 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..171
None	No IPR available	GENE3D	1.10.10.60		coord: 58..125 e-value: 8.6E-20 score: 72.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..64
None	No IPR available	PANTHER	PTHR24326:SF527	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40	coord: 11..217
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 11..217
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 97..113 score: 58.71 coord: 88..97 score: 46.12
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 60..121 e-value: 7.6E-18 score: 75.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 63..116 e-value: 3.5E-16 score: 58.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 57..117 score: 16.471045
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 64..118 e-value: 3.46274E-15 score: 66.498
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 92..115
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 62..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G19480.2	Clc01G19480.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding