Clc01G17910 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G17910
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Methyltransf_11 domain-containing protein
Location	ClcChr01: 30482652 .. 30488851 (+)
RNA-Seq Expression	Clc01G17910
Synteny	Clc01G17910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGAGGCAGCCTACTTCCACGCGTCGCAATGGAAGCTTTCCATTTGCTGGGGCCCTGAATGCGAAATCAAAATCATCTCCCTTGTTATCTATATGCCTGGTCCTTGTGGTAAATGTCATGATCGAGAATCAATTTTCTTTCCTGATTTAGTTTATATTTCTTATCATTTTCTCTAGATTAGTGCGGTGGGTAGATGATAATTTATGATTGCATTGTACTTTTACGACTCAGTAAAAGTCCATATAGTTGGTATTTGAATTTTGACTATTTTCTTGGGTTTTCACAGGGAGCAGTTCTTCTACTTGTCTATGCTTTTAGTGGACCAGGTTTGCATTCTATTTTACATTTTCTAGACTTCTCATTACATGATAATGTGATAGGATCCCTAGTATTCTTACTGACTTTGATTATAGTTTGGGGTGGTATACTTTGAATATAGATGAAGAAATGAACAATGGGGTTTATCGTCTCATTCATTGAACTATTATTTATTAATACAGGTTTATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTAAAATAAGATTTCCTTTTGTAACCTCCTTGACGTTTAGGGAGCAGGCTTGTCTCCCTCTTTGTCACCTTTTTTTATGCAATGCTTGTGCCTTTGGGAATTCTTTGATTTCTGTCACATCACAATCCCCAAATGCCAGCTTTGATTCCTTCGACCTACAAAATTTAATGTTGTTTTTGAATCCATGCTTACCTAGCAATTGATGGATACTTTCCTTTGGGTAAGATCGAAGATCCCAGAATGTCCAAAGAGGTGAAATATTGCCCCCAGCATTTTAAACTACATGAACAAGGAAAGAAAAGGCAGCTTCATCCTCCATTGCTTGCAAACAAAGCACGCAAAAGTTAGGACATAACAGTAGCGATGACACTTTCTTCGTACTTTAACTGCCATATCTGAGCCTCCCAAAAGAAGAATCAGTGTTAAGGCATTTACTCTTTTTAGACATTTCATCTTCCATAATGCCGTTGATACGACCCTTGGGATCAAAGAGTTTGTTGACTGGGATATGGCCCAAGGAGCCCAATTTCCAAAGTCTACTATCTTCCCTCCCAACAACCCCCTTGGTTATGGATTCCATGTACTCAATTTAATTGCGTATTGTTGTTACTTTATGGTTATTTTGCTAGTAGTTTAATTTATTTTAGTGAAATCTGTATTAAGGATAGCTATGTTGTAAGTTTACAATTAAAAATTCAAAACTTTTTGCCCCTAAACTACAGTAAAATGATGAAAAGGTGGATGAAGTTGCTTAGAGTGAAAAGCATCTTTGATATATAATTCTTCTGTCCTTGCATTGTATAGTTTGGTCTATCTTCAATTCCATATGGAAGCTTCCTAGATAATTTTGCAATTTTATACTGTTTGTTTTCCTCCATGTCTTGATCTATTGGGGACAGATGATATCACATTCGTATTTGTTGTGTCTTGTTTGATGGCTCACTGTTAACTAACTAGCATGGCAAAGCCTGTAATATTTAAGAATTTCATATGATGGTTTGATGATCTCAATCAATATTAGTTACTATGGCAAGTGCTTGCAACTTGTAATATGTAAGTATTTAATGGTTAATCCTAGTGATGTTTCTATAAGATTTGGTTGCTTCTGTGAGCATTTACTGTCAAAATTATAGTTTCGTTGGCTAAGGAGGTATTTAAACACATAGATCGAAATTGAACCTGTAGGTGATTTTTCATGCACATTGGAGTTGCAAAGAGCAGTACCCATCTTGAAGAAAGCATATGGTGATAGCATGCGCAAGGTTTTGCATGTTGGTCCTGATACCTGCTCTGTGGTATCTAAACTGTTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATACGACATAGAAGATGCTGATGGAAACTGCAAATCACTTGTGAACAAAGGCATTGTACGTGTGGCAGACATCAAATTCCCTCTACCATATAGGGCAAAGTCATTTTCTCACGTTATTGTGTCAGATGCATTGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCAGAATTCGCAAGGGTTTCTTCTGATGGTCTCGTTATATTTACTGGTAACTTTTTGAAAGCTCTATGTAACATCATAAAGATTTCTTTTCATTGCATCATAATTTCACTACCAAGCACTTTGTGTTTTGAACTCTTCATTGGCAACTATTTTTTGAAGTGTATCTGCTATTACTCTGGAAACTCCACAATCATGTGATGAATGTCCTCATTGAATGCTGGATGTTCTGCTCCTACTACTAGTTCAAGTTGGGTACAGAGCATTTGAATCTAGGATTGAAAACAAGTCAACTAAAATTTTCCAGCTGAGCCATCATTGAGGATTAGGATTACTTTGTTTTGAGATAAAAACAGCTACTAATGTTCAAATGTTTCACTTCTTTTCTTGACCTACAAGGAACCAATTGGAAAGTTCCTCTCAGCTGATTGTCGTTATAACAACCACACACAATCATTTGGACCATAAATCCTGTCACTACGTTGTAGATACAGAGAAACATCTCATAAAATTAAGAGTCTTCTCTGTTGCATATCATGTTTCTCCTATTCTCTCGCTAACCACATTTTGATGTTGGTCTTCATTATTTCTTATCCAATGTTAATATTATTCCATTTGATAATGATCTGGTGACCTTTTACTGTCTCTCTTTTGTCTAGGTTCCCCTGGTCAGCAGAAAGCAAAAGTAAACGAGTTATCAAAGTTTGGACGGCCGGTAAGCTACTACTTAATCACATGTTATTTTGTGTGCCATTTTTATTGGATATGTTCATGCATCATGTTTTTGTGTTTCTAAATAAAATTATAAACAATATGGATAGTATGCGAATTCACAGATCTAATTGCTAGTGGAACTATAATGAATAAGCAAGCTCTTAAAACATACCCATATGGCAATAATTGTGGCTTAGGTCATATTACAATTAAGAAGCTGTAGAAATCTAGGTATCGATATTCTTCTCTCTGTACAATTTCTCCCAAATCAATCATTAGGTAAAGTTACACATTCCCCTCCTGAAATCATAGCCTATTTAAGATTAAATTGCAATGTTTTAATTTGGAAAAATTGGTCCCCTGTTGATAGTGGAAAGTAGTCTTTGTATTTTCCATGTTTTTGAAAACTGTATGTACAATGCAATCAATTTCTTGTAATTTTATCCTACACATAACTTTGTTCAGTTTACCACGGAGTCTATTTTACAATTCACAGTATTATTTGATATTTAACAATTTGGGATATCTGTTGTTTATTTAATCATTTTTAAGAATAACTTTAATTATAATGAGAATTCGGTTGACTAACTTAGTAAAGAGAGTTAGAACAATTTGAAGATTGACGATCGTTCATACCATCAATGAAATTGTTTCTTAGAAACAATTTGAAGATTGAATTTCTTGTAGTATTGTTGGCAAGCTGGAGGGCTAGATATGACCTATAGAAAATCAATTTTTAAGGCTTGTTCGATTAATAAGCTTGTTTTGATAATACCTTTTGCTTTCCCTTGACTCACTTCTGTGCCCCTGTTTGGGGATCCAAAGACCAGCATTTCTATAATCTCTCTTTAAATTAACTATTGTTAGGAGTGCAAATTGGTTAGGGAAGAGAGATCTATGGTATATAAGTGAGGACAATTATCTCCACTAGTACGAGGCCTTTTGGGTTGTTCTAGAAGGAAAGTCATGAGGGTTTATATCCAAAGTGGATAATATTATATAATTGTGGAGATAGGTGGAGGTTCTATTGTCCTTATCATTTAGCTTGAGGCTCATTTCCTCTTCCATTTTACTTTTGTAGGCTCCCTTTTATTTTGGATTTCTGGTTTGGTATAGCTCATGCTTTTGTCTTTTCATTAACAAAATGAAAGTTGGGTTTCATGAAAAGAAATAACGTGTTTTATACTTTGCATATTTTTAAAATGTTGCTAACTTAGCTTAATATCACAAACTAAAGGTGGATGTTTCCATCAAAATTGTTCAGGTTAATTCTTTTATAAATAATTGTTGAAACCTGTATACATTTTCGAATAGAAAATAGTCTTTGGAGGAAAAATATAGGTAGAAGTGTTTGAGTTTCAGACTCTAGACATTTGTATTGAGCTAGAAGCTCTAGGTGGGTATGTGAAAGAACATCGAGGGTTTTAGAGGGATGGATAAGGAGCCTAGTGATGTTTGGACCCTTATTGGGTTTTATATTTCCCTTTGGACTTCGACCTTAAGTTTTTTTGTAATTATTCTACCGCCACTATTTTGCTTGATATTAGACCCCTTTTCTTTAGTGGGGTTCTGCTATTGGGGGCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACAGTCTTCTATCCTTTCATTGTTTCCCTCGTGTTTACTTAATCTAAAAAAATGATTGAAGAAGAAATTCAAAGGGGCAAAGTAAAAATTTAAGAAATCATACATTAAAGAGGTTTATGTCTGCTAAATGCTTTAAGCCTGATACCTTTATGGAGTGAACGTCTGGAGACTGAAAGCCCCGCCATACAACAGTGAGTAAATATCTTGATTTACGTGGTATACTAAACATTCGTAATATGGTTGTATTTCTTTTGATAAGAAATAATATGATTGTGTGATTTCATTAATGTAATGGATATATTGATTTTTGAGAGGTTAATGGATATGTTACTTCATATTTGAAGGCCAAAATGCGAAGCTCGTCTTGGTGGATTCGATTTTTTGTCCAAACAAGCTTAGAAGAGGACGAAGCCGCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGATATCAAATCACAAGATATGAAATTATTTTCTTACCCTCTTTTTTGTCTCCTTTTCTTGTCATTCTTATGTTATAAACAAACATAAGAGAAGCTAGGGAGGAGGAGAATCCGCAATTGATGTACGCTTTTTTGTCTTTTTCTTCTTTTGGTGGTGGGTTGGGGGAATATTATTGGCACAAAATTGTCAACCACAGGAGATTTTAGTGTTCTCAAGTTCTTACGGTACGATATATTAATTATTTTTATTTAATGAGATAAATACAACTGATATTCATATCGTTTTGGCTCTTTGCTTTCTTAGTATATCTTCTACCTATTACTCATCCTGCCCACTTAATCGATCGAACTCTGAACTTCAGCAAGCATATATGATATATCTGATGTATCCTGCTGACATGTTGATGTTGTATAATAATTTATCTTCTGAACTTTAACACTGTTGTTTCGGCTGGACTACTTTTATTACAAAACAAATGTGGGCTGAGATTGTCCCGTGTTCTTCTCATGAATACAGTTACAAGTAACTTTAACACAATGGCTGTCCTCTGAATCCATGCATCCTTGAAGTTTTTGTAGTACATAAAATTGTGTTGGTATTAAATGGTAATGTTTATTATAGCAAAATCCCGTTTCCTCGCAAATGGGTTTCATTTGTGCATCAAGAGTCTGGGAATGCTATCGAATGATCGAGATTCCATCTTTTCTTTCAACCTTGTAGTTTATAGAAATGACTTAAAGCTTGAAGTGGAGATGAATTGCTTCCTTATCTTAAAGTCTACGAGACAATTTTGAATTGCTGCAAGTGTCAGACTGTAGAAAAAGATATAACGAATTTGATTTCGATTTAAAATCATTGATGATTTAGTTATTCTTGTCTTTCTTTTCCATTGTTTGTGTGAAGTATCCTGTCATGCTTATGCTTAACAGATTTGAATATCGTGCAAGATATAGCCAGCCATCTACACAGCCCTGTGAGAGAAAATCAGAGGGCAATCTCAAAATTGAAAAACAGAGGCCCAGGATGGCTATTTGTTTGTATCCATGCCAAATATGACGATCAAAGCGGAACTTGAGAGATTTTGTTAAGAGGTTAGTAATTGGTTAATTATGATTAGCTTTCTCAGTAGGACTACTAGTCGATACTGGGTTTCGAAAACCAAGAAATCATTTGAGTCTTATTGATTGCTTCATCAATTCGTTTAGAATCTCCCAATTCCATTTCACTTCAAAATCTGACACATCATTTTCTTGTTTTTAATGTTTAACATTCCCAAGTCCCAACATGATATTATTCCAA

mRNA sequence

ATGCAAAGGAGGCAGCCTACTTCCACGCGTCGCAATGGAAGCTTTCCATTTGCTGGGGCCCTGAATGCGAAATCAAAATCATCTCCCTTGTTATCTATATGCCTGGTCCTTGTGGGAGCAGTTCTTCTACTTGTCTATGCTTTTAGTGGACCAGGTTTATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTGATTTTTCATGCACATTGGAGTTGCAAAGAGCAGTACCCATCTTGAAGAAAGCATATGGTGATAGCATGCGCAAGGTTTTGCATGTTGGTCCTGATACCTGCTCTGTGGTATCTAAACTGTTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATACGACATAGAAGATGCTGATGGAAACTGCAAATCACTTGTGAACAAAGGCATTGTACGTGTGGCAGACATCAAATTCCCTCTACCATATAGGGCAAAGTCATTTTCTCACGTTATTGTGTCAGATGCATTGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCAGAATTCGCAAGGGTTTCTTCTGATGGTCTCGTTATATTTACTGGTTCCCCTGGTCAGCAGAAAGCAAAAGTAAACGAGTTATCAAAGTTTGGACGGCCGGCCAAAATGCGAAGCTCGTCTTGGTGGATTCGATTTTTTGTCCAAACAAGCTTAGAAGAGGACGAAGCCGCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGAGATTTTAGTGTTCTCAAGTTCTTACGATTTGAATATCGTGCAAGATATAGCCAGCCATCTACACAGCCCTGTGAGAGAAAATCAGAGGGCAATCTCAAAATTGAAAAACAGAGGCCCAGGATGGCTATTTGTTTGTATCCATGCCAAATATGACGATCAAAGCGGAACTTGAGAGATTTTGTTAAGAGGTTAGTAATTGGTTAATTATGATTAGCTTTCTCAGTAGGACTACTAGTCGATACTGGGTTTCGAAAACCAAGAAATCATTTGAGTCTTATTGATTGCTTCATCAATTCGTTTAGAATCTCCCAATTCCATTTCACTTCAAAATCTGACACATCATTTTCTTGTTTTTAATGTTTAACATTCCCAAGTCCCAACATGATATTATTCCAA

Coding sequence (CDS)

ATGCAAAGGAGGCAGCCTACTTCCACGCGTCGCAATGGAAGCTTTCCATTTGCTGGGGCCCTGAATGCGAAATCAAAATCATCTCCCTTGTTATCTATATGCCTGGTCCTTGTGGGAGCAGTTCTTCTACTTGTCTATGCTTTTAGTGGACCAGGTTTATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTGATTTTTCATGCACATTGGAGTTGCAAAGAGCAGTACCCATCTTGAAGAAAGCATATGGTGATAGCATGCGCAAGGTTTTGCATGTTGGTCCTGATACCTGCTCTGTGGTATCTAAACTGTTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATACGACATAGAAGATGCTGATGGAAACTGCAAATCACTTGTGAACAAAGGCATTGTACGTGTGGCAGACATCAAATTCCCTCTACCATATAGGGCAAAGTCATTTTCTCACGTTATTGTGTCAGATGCATTGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCAGAATTCGCAAGGGTTTCTTCTGATGGTCTCGTTATATTTACTGGTTCCCCTGGTCAGCAGAAAGCAAAAGTAAACGAGTTATCAAAGTTTGGACGGCCGGCCAAAATGCGAAGCTCGTCTTGGTGGATTCGATTTTTTGTCCAAACAAGCTTAGAAGAGGACGAAGCCGCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGAGATTTTAGTGTTCTCAAGTTCTTACGATTTGAATATCGTGCAAGATATAGCCAGCCATCTACACAGCCCTGTGAGAGAAAATCAGAGGGCAATCTCAAAATTGAAAAACAGAGGCCCAGGATGGCTATTTGTTTGTATCCATGCCAAATATGACGATCAAAGCGGAACTTGA

Protein sequence

MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIVSKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYDIEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARVSSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAASKQSYKPGCQEILVFSSSYDLNIVQDIASHLHSPVRENQRAISKLKNRGPGWLFVCIHAKYDDQSGT

Homology

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BLAST of Clc01G17910 vs. NCBI nr
Match: XP_038881787.1 (probable pectin methylesterase CGR2 [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.6e-136
Identity = 247/250 (98.80%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGG+KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGSKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           +KQSYKPGCQ
Sbjct: 241 TKQSYKPGCQ 250

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BLAST of Clc01G17910 vs. NCBI nr
Match: XP_008465059.1 (PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo])

HSP 1 Score: 492.7 bits (1267), Expect = 2.4e-135
Identity = 244/250 (97.60%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGA+LLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAILLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKA+GDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAFGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADGNCKSLVNKGIVRVADIKFPLPYR+KSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRSKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDE AAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKPGCQ
Sbjct: 241 SKQSYKPGCQ 250

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BLAST of Clc01G17910 vs. NCBI nr
Match: XP_008440436.1 (PREDICTED: uncharacterized protein At3g49720 [Cucumis melo] >XP_008440437.1 PREDICTED: uncharacterized protein At3g49720 [Cucumis melo] >XP_016899234.1 PREDICTED: uncharacterized protein At3g49720 [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 2.6e-134
Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRAV ILKKA+G+SMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAVTILKKAFGNSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEE+EAAAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEENEAAAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKPGCQ
Sbjct: 241 SKQSYKPGCQ 250

[Close]

BLAST of Clc01G17910 vs. NCBI nr
Match: XP_004142364.1 (probable pectin methylesterase CGR2 [Cucumis sativus] >XP_004142365.1 probable pectin methylesterase CGR2 [Cucumis sativus] >KGN52366.1 hypothetical protein Csa_008436 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 3.8e-133
Identity = 239/250 (95.60%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSK+SPLLSICLVLVGA+LLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKASPLLSICLVLVGAILLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKA+GDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAFGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADG CKSLVNKGIVRVADIKFPLPYR+KSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGKCKSLVNKGIVRVADIKFPLPYRSKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAK+RSSSWWIRFFVQTSLEEDE +AKKF+QAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKLRSSSWWIRFFVQTSLEEDEGSAKKFEQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKPGCQ
Sbjct: 241 SKQSYKPGCQ 250

[Close]

BLAST of Clc01G17910 vs. NCBI nr
Match: XP_022963204.1 (uncharacterized protein At3g49720-like [Cucurbita moschata] >XP_022963205.1 uncharacterized protein At3g49720-like [Cucurbita moschata] >XP_023518226.1 uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo] >KAG6594950.1 putative pectin methylesterase CGR2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 484.6 bits (1246), Expect = 6.5e-133
Identity = 239/250 (95.60%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPT+TRRNGSFPFAGALN+KSKSSPLLSICLVL+GAVLLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTTTRRNGSFPFAGALNSKSKSSPLLSICLVLLGAVLLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDAD NCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADRNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           S+DGL+IFTGSPGQQKAKVNEL+KFGRPAKMRSSSWWIRFFVQTSLEEDEA+AKKFKQAA
Sbjct: 181 SADGLIIFTGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFVQTSLEEDEASAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKP CQ
Sbjct: 241 SKQSYKPACQ 250

[Close]

BLAST of Clc01G17910 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-109
Identity = 196/253 (77.47%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MQRRQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGN 60
           M RRQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG+F   
Sbjct: 1   MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60

Query: 61  KIVSKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIE 120
           K VSK+ GD+SCT E+QRA+P+LKKAYGD MRKVLHVGPDTCSVVS LLKE ETEAWG+E
Sbjct: 61  KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120

Query: 121 PYDIEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEF 180
           PYDIEDAD +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDALDYLSPKYLNKT+PE 
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180

Query: 181 ARVSSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFK 240
           ARV+SDG+V+F G PGQQ+AKV ELSKFGRPAKMRS+SWW RFFVQT+LEE++A +KKF+
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240

Query: 241 QAASKQSYKPGCQ 251
           QA SK  YKP CQ
Sbjct: 241 QAVSKGLYKPACQ 253

[Close]

BLAST of Clc01G17910 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.8e-109
Identity = 191/250 (76.40%), Postives = 220/250 (88.00%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           M RRQ      +GSFPF GAL++KS+SSPLLS+CLVLVGA LL+ YA+SGPG+F   + V
Sbjct: 1   MSRRQVRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKI GD+SCT E+QRA+PILK AYGDSMRKVLHVGP+TCSVVS LL E ETEAWG+EPYD
Sbjct: 61  SKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           +EDAD NCKSL++KG+VRVADIKFPLPYR+KSFS VIVSDALDYLSP+YLNKT+PE ARV
Sbjct: 121 VEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           +SDG+V+  G+PGQQKAK  ELSKFGRPAKMRSSSWWIRFF QT+LEE+EAA+KKF+QAA
Sbjct: 181 ASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAA 240

Query: 241 SKQSYKPGCQ 251
           SK SYKP CQ
Sbjct: 241 SKSSYKPACQ 250

[Close]

BLAST of Clc01G17910 vs. ExPASy TrEMBL
Match: A0A1S3CN00 (uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103502767 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.1e-135
Identity = 244/250 (97.60%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGA+LLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAILLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKA+GDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAFGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADGNCKSLVNKGIVRVADIKFPLPYR+KSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRSKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDE AAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKPGCQ
Sbjct: 241 SKQSYKPGCQ 250

[Close]

BLAST of Clc01G17910 vs. ExPASy TrEMBL
Match: A0A1S3B1Q9 (uncharacterized protein At3g49720 OS=Cucumis melo OX=3656 GN=LOC103484880 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.3e-134
Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRAV ILKKA+G+SMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAVTILKKAFGNSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEE+EAAAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEENEAAAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKPGCQ
Sbjct: 241 SKQSYKPGCQ 250

[Close]

BLAST of Clc01G17910 vs. ExPASy TrEMBL
Match: A0A0A0KX27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630200 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.8e-133
Identity = 239/250 (95.60%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSK+SPLLSICLVLVGA+LLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKASPLLSICLVLVGAILLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKA+GDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAFGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDADG CKSLVNKGIVRVADIKFPLPYR+KSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGKCKSLVNKGIVRVADIKFPLPYRSKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           SSDGLVIFTGSPGQQKAKVNELSKFGRPAK+RSSSWWIRFFVQTSLEEDE +AKKF+QAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKLRSSSWWIRFFVQTSLEEDEGSAKKFEQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKPGCQ
Sbjct: 241 SKQSYKPGCQ 250

[Close]

BLAST of Clc01G17910 vs. ExPASy TrEMBL
Match: A0A6J1HHC1 (uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC111463487 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.1e-133
Identity = 239/250 (95.60%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPT+TRRNGSFPFAGALN+KSKSSPLLSICLVL+GAVLLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTTTRRNGSFPFAGALNSKSKSSPLLSICLVLLGAVLLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDAD NCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADRNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           S+DGL+IFTGSPGQQKAKVNEL+KFGRPAKMRSSSWWIRFFVQTSLEEDEA+AKKFKQAA
Sbjct: 181 SADGLIIFTGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFVQTSLEEDEASAKKFKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKP CQ
Sbjct: 241 SKQSYKPACQ 250

[Close]

BLAST of Clc01G17910 vs. ExPASy TrEMBL
Match: A0A6J1KWN3 (uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC111497077 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 237/250 (94.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           MQRRQPT+TRRNGSFPF+GALN+KSKSSPLLSICLVL+GAVLLLVYAFSGPGLFGG KIV
Sbjct: 1   MQRRQPTTTRRNGSFPFSGALNSKSKSSPLLSICLVLLGAVLLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKIEGDFSCTLELQRA+PILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           IEDAD NCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADRNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           S+DGL+IFTGSPGQQKAKVNEL+KFGRPAKMRSSSWWIRFFVQTSLEEDEA+AKK+KQAA
Sbjct: 181 SADGLIIFTGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFVQTSLEEDEASAKKYKQAA 240

Query: 241 SKQSYKPGCQ 251
           SKQSYKP CQ
Sbjct: 241 SKQSYKPACQ 250

[Close]

BLAST of Clc01G17910 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-110
Identity = 196/253 (77.47%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MQRRQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGN 60
           M RRQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG+F   
Sbjct: 1   MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60

Query: 61  KIVSKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIE 120
           K VSK+ GD+SCT E+QRA+P+LKKAYGD MRKVLHVGPDTCSVVS LLKE ETEAWG+E
Sbjct: 61  KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120

Query: 121 PYDIEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEF 180
           PYDIEDAD +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDALDYLSPKYLNKT+PE 
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180

Query: 181 ARVSSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFK 240
           ARV+SDG+V+F G PGQQ+AKV ELSKFGRPAKMRS+SWW RFFVQT+LEE++A +KKF+
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240

Query: 241 QAASKQSYKPGCQ 251
           QA SK  YKP CQ
Sbjct: 241 QAVSKGLYKPACQ 253

[Close]

BLAST of Clc01G17910 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-110
Identity = 196/253 (77.47%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MQRRQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGN 60
           M RRQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG+F   
Sbjct: 1   MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60

Query: 61  KIVSKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIE 120
           K VSK+ GD+SCT E+QRA+P+LKKAYGD MRKVLHVGPDTCSVVS LLKE ETEAWG+E
Sbjct: 61  KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120

Query: 121 PYDIEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEF 180
           PYDIEDAD +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDALDYLSPKYLNKT+PE 
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180

Query: 181 ARVSSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFK 240
           ARV+SDG+V+F G PGQQ+AKV ELSKFGRPAKMRS+SWW RFFVQT+LEE++A +KKF+
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240

Query: 241 QAASKQSYKPGCQ 251
           QA SK  YKP CQ
Sbjct: 241 QAVSKGLYKPACQ 253

[Close]

BLAST of Clc01G17910 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 394.8 bits (1013), Expect = 6.3e-110
Identity = 191/250 (76.40%), Postives = 220/250 (88.00%), Query Frame = 0


Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGNKIV 60
           M RRQ      +GSFPF GAL++KS+SSPLLS+CLVLVGA LL+ YA+SGPG+F   + V
Sbjct: 1   MSRRQVRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREV 60

Query: 61  SKIEGDFSCTLELQRAVPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120
           SKI GD+SCT E+QRA+PILK AYGDSMRKVLHVGP+TCSVVS LL E ETEAWG+EPYD
Sbjct: 61  SKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVEPYD 120

Query: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180
           +EDAD NCKSL++KG+VRVADIKFPLPYR+KSFS VIVSDALDYLSP+YLNKT+PE ARV
Sbjct: 121 VEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARV 180

Query: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240
           +SDG+V+  G+PGQQKAK  ELSKFGRPAKMRSSSWWIRFF QT+LEE+EAA+KKF+QAA
Sbjct: 181 ASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAA 240

Query: 241 SKQSYKPGCQ 251
           SK SYKP CQ
Sbjct: 241 SKSSYKPACQ 250

The following BLAST results are available for this feature:

BLAST of Clc01G17910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881787.1	1.6e-136	98.80	probable pectin methylesterase CGR2 [Benincasa hispida]	[more]
XP_008465059.1	2.4e-135	97.60	PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo]	[more]
XP_008440436.1	2.6e-134	98.00	PREDICTED: uncharacterized protein At3g49720 [Cucumis melo] >XP_008440437.1 PRED...	[more]
XP_004142364.1	3.8e-133	95.60	probable pectin methylesterase CGR2 [Cucumis sativus] >XP_004142365.1 probable p...	[more]
XP_022963204.1	6.5e-133	95.60	uncharacterized protein At3g49720-like [Cucurbita moschata] >XP_022963205.1 unch...	[more]

BLAST of Clc01G17910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Y6	2.3e-109	77.47	Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2...	[more]
Q0WPN7	8.8e-109	76.40	Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2...	[more]

BLAST of Clc01G17910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CN00	1.1e-135	97.60	uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103502767 P...	[more]
A0A1S3B1Q9	1.3e-134	98.00	uncharacterized protein At3g49720 OS=Cucumis melo OX=3656 GN=LOC103484880 PE=4 S...	[more]
A0A0A0KX27	1.8e-133	95.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630200 PE=4 SV=1	[more]
A0A6J1HHC1	3.1e-133	95.60	uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KWN3	1.6e-132	94.80	uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC1114970...	[more]

BLAST of Clc01G17910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49720.1	1.6e-110	77.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G49720.2	1.6e-110	77.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G65810.1	6.3e-110	76.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 79..281 e-value: 3.6E-7 score: 32.1
None	No IPR available	PANTHER	PTHR34208:SF2	PECTIN METHYLESTERASE CGR2-RELATED	coord: 1..251
IPR044689	Pectin methyltransferase CGR2/3	PANTHER	PTHR34208	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 1..251
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 87..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G17910.1	Clc01G17910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045488	pectin metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity