Clc01G17740 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G17740
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Uncharacterised conserved protein UCP031279
Location	ClcChr01: 30350275 .. 30351106 (-)
RNA-Seq Expression	Clc01G17740
Synteny	Clc01G17740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACCGCAAATTCCATCTATATATATGCACAAACATACACTACGGTCATTCCCAATTCAAACTTCCTCCGATTCCCAGTCGCCGGCAATTCAGATATTCAGACGTCCACGGCGTCGCCTACGTGGCATAATAAAATGGAGACCATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCCTCGAGCCGGATGCTGTCCAAAGTCCGAGATTTCTACATAAAAAGCCTGACGGACTGCTCCAACCACCTGGATTATGGGATGGCGCTGAGCGGGCCGGCGGGTCAAGTGCCTACCAATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCTAGCCACGGTGGCGACGACTACAGTGAGCTTCTGAGAGCGGCGTCGATTCGAAGCTTGAGCAAGAAGGTTGAACCCGATTTGGAGGCGAGGAAATCGCCGATGATGGGGGGACCGAAGAACGTGGCGAGGAGCCAGAGCGTAGGGATTGGAAGAATTGACGAAGATAAAACCTATGAATTTGAAGATGACTTCAAGGTCAGTAATTTTAATAATGCGTATCCGAGAAGCAGAAGCTACGCTGTTCATGGAAGATCATCAAGACGGGTGTATTGAAATTCTTGGTCCATTTAATTTCATAGTGTGATTAATTTTGGGAATTTCGTGTCCTTGGAATTTAATTCTATATAAATTTCAAATTATAGAAACTTTATATTCTTCTCGATCGTTTTATAATGTCCAAAATTAATCAAAGTCGTAAGAAGGAAAGAATCTATTGGAGAGGCAGGGGGTTGAAATTGGGACGTGCCG

mRNA sequence

CTTCACCGCAAATTCCATCTATATATATGCACAAACATACACTACGGTCATTCCCAATTCAAACTTCCTCCGATTCCCAGTCGCCGGCAATTCAGATATTCAGACGTCCACGGCGTCGCCTACGTGGCATAATAAAATGGAGACCATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCCTCGAGCCGGATGCTGTCCAAAGTCCGAGATTTCTACATAAAAAGCCTGACGGACTGCTCCAACCACCTGGATTATGGGATGGCGCTGAGCGGGCCGGCGGGTCAAGTGCCTACCAATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCTAGCCACGGTGGCGACGACTACAGTGAGCTTCTGAGAGCGGCGTCGATTCGAAGCTTGAGCAAGAAGGTTGAACCCGATTTGGAGGCGAGGAAATCGCCGATGATGGGGGGACCGAAGAACGTGGCGAGGAGCCAGAGCGTAGGGATTGGAAGAATTGACGAAGATAAAACCTATGAATTTGAAGATGACTTCAAGGTCAGTAATTTTAATAATGCGTATCCGAGAAGCAGAAGCTACGCTGTTCATGGAAGATCATCAAGACGGGTGTATTGAAATTCTTGGTCCATTTAATTTCATAGTGTGATTAATTTTGGGAATTTCGTGTCCTTGGAATTTAATTCTATATAAATTTCAAATTATAGAAACTTTATATTCTTCTCGATCGTTTTATAATGTCCAAAATTAATCAAAGTCGTAAGAAGGAAAGAATCTATTGGAGAGGCAGGGGGTTGAAATTGGGACGTGCCG

Coding sequence (CDS)

ATGGAGACCATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCCTCGAGCCGGATGCTGTCCAAAGTCCGAGATTTCTACATAAAAAGCCTGACGGACTGCTCCAACCACCTGGATTATGGGATGGCGCTGAGCGGGCCGGCGGGTCAAGTGCCTACCAATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCTAGCCACGGTGGCGACGACTACAGTGAGCTTCTGAGAGCGGCGTCGATTCGAAGCTTGAGCAAGAAGGTTGAACCCGATTTGGAGGCGAGGAAATCGCCGATGATGGGGGGACCGAAGAACGTGGCGAGGAGCCAGAGCGTAGGGATTGGAAGAATTGACGAAGATAAAACCTATGAATTTGAAGATGACTTCAAGGTCAGTAATTTTAATAATGCGTATCCGAGAAGCAGAAGCTACGCTGTTCATGGAAGATCATCAAGACGGGTGTATTGA

Protein sequence

METIKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPTNLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVARSQSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSRRVY

Homology

[Close]

BLAST of Clc01G17740 vs. NCBI nr
Match: KAA0036403.1 (uncharacterized protein E6C27_scaffold18G002050 [Cucumis melo var. makuwa] >TYK12799.1 uncharacterized protein E5676_scaffold255G003890 [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 7.7e-64
Identity = 138/168 (82.14%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   METIKN-GDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAG 60
           ME IKN  D+ KKMNKG+KLSQL +ASSR+LSKVRDFY++SLTDCSNHLDYGMALSGP G
Sbjct: 1   MENIKNVVDEKKKMNKGSKLSQLARASSRLLSKVRDFYVRSLTDCSNHLDYGMALSGPGG 60

Query: 61  QVPTNLPRSYSVGST-ASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVA 120
           QVPTNLPRSYSVGS+ ASSHGGDDYSELLRAAS+RSLSKKVEPDLE RKS     PKNV 
Sbjct: 61  QVPTNLPRSYSVGSSAASSHGGDDYSELLRAASVRSLSKKVEPDLEGRKS-----PKNVP 120

Query: 121 RSQSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAV--HGRSSRR 165
           RSQSVGIGRIDEDKTYEFED+FK SN NN YPRS+SYAV  H RSSRR
Sbjct: 121 RSQSVGIGRIDEDKTYEFEDEFKASNLNNLYPRSKSYAVPTHRRSSRR 163

[Close]

BLAST of Clc01G17740 vs. NCBI nr
Match: KGN48992.2 (hypothetical protein Csa_003129 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 5.5e-62
Identity = 135/164 (82.32%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IKN D+ KKMNKG+KLSQL +ASSR+LSKVRDFYI+SLTDCSNHLDYGMALSGP GQVP 
Sbjct: 5   IKNVDEKKKMNKGSKLSQLARASSRLLSKVRDFYIRSLTDCSNHLDYGMALSGPGGQVPI 64

Query: 64  NLPRSYSVGST-ASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVARSQS 123
           NLPRSYSVGS+ ASSHGGDDYSELLRAAS+RSL KKVE DLEARKS     PKNV RSQS
Sbjct: 65  NLPRSYSVGSSAASSHGGDDYSELLRAASVRSLGKKVELDLEARKS-----PKNVPRSQS 124

Query: 124 VGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAV--HGRSSRR 165
           VGIGRIDEDKTYEFED+FK SN NN YPRS+SYAV  H RSSRR
Sbjct: 125 VGIGRIDEDKTYEFEDEFKGSNLNNLYPRSKSYAVHTHRRSSRR 163

[Close]

BLAST of Clc01G17740 vs. NCBI nr
Match: XP_022132695.1 (uncharacterized protein LOC111005494 [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61
Identity = 125/160 (78.12%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IK G++ KKMNKG+KL +LVKAS R+LS+VRDFYI+SLT+CSNHLDYGMAL+GPAGQ+PT
Sbjct: 3   IKTGNEPKKMNKGSKLRELVKASGRLLSRVRDFYIRSLTECSNHLDYGMALTGPAGQLPT 62

Query: 64  NLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVARSQSV 123
           +LP+SYSVGSTASSHGGDDYSELLRAAS RSLSKK+EPDL+A +   M GP NV RSQSV
Sbjct: 63  HLPKSYSVGSTASSHGGDDYSELLRAASTRSLSKKIEPDLQAARKSPMAGPNNVPRSQSV 122

Query: 124 GIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSR 164
           GIGRIDE+KTYEFE+DFK SN ++AYPRSRSYAVH R SR
Sbjct: 123 GIGRIDEEKTYEFEEDFKPSN-SDAYPRSRSYAVHRRRSR 161

[Close]

BLAST of Clc01G17740 vs. NCBI nr
Match: XP_023543992.1 (uncharacterized protein LOC111803699 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.6 bits (584), Expect = 2.0e-56
Identity = 126/166 (75.90%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IKNG Q KK NK NKLSQL+KASSR+LSKVRDFY++SLTDCSNHLDYGMA++GP  QVPT
Sbjct: 3   IKNGHQMKKSNKENKLSQLIKASSRLLSKVRDFYVRSLTDCSNHLDYGMAMTGPTSQVPT 62

Query: 64  NLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLE---ARKSPMMGGPKNVARS 123
            LP+SYSVGSTASSHG DD+ ELLRAAS RSLSK +EPD++   ARKSP M   KNV RS
Sbjct: 63  TLPKSYSVGSTASSHGSDDFRELLRAASTRSLSKNLEPDIQIQAARKSP-MAELKNVPRS 122

Query: 124 QSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSRRVY 167
           QSVGIGRIDE+KT EFE+DFKV N  +AYPRSRSYAVH R  RRVY
Sbjct: 123 QSVGIGRIDEEKTCEFEEDFKVCN-TDAYPRSRSYAVHRR--RRVY 164

[Close]

BLAST of Clc01G17740 vs. NCBI nr
Match: XP_022978000.1 (uncharacterized protein LOC111478121 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 5.9e-56
Identity = 126/166 (75.90%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IKNG Q KK NK NKLSQL+KASSR+LSKVRDFY++SLTDCSNHLDYGMAL+GP  QVPT
Sbjct: 3   IKNGHQMKKSNKENKLSQLIKASSRLLSKVRDFYVRSLTDCSNHLDYGMALTGPTSQVPT 62

Query: 64  NLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLE---ARKSPMMGGPKNVARS 123
            LP+SYSVGST SSHG DD+ ELLRAAS RSLSK VEPD +   ARKSP M  P NV RS
Sbjct: 63  TLPKSYSVGSTVSSHGSDDFRELLRAASTRSLSKNVEPDFQIQAARKSP-MAEPNNVPRS 122

Query: 124 QSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSRRVY 167
           QSVGIGRIDE+KT EFE+DFKV N  +AYPRSRSYAV  R  RRVY
Sbjct: 123 QSVGIGRIDEEKTCEFEEDFKVCN-TDAYPRSRSYAV--RRRRRVY 164

[Close]

BLAST of Clc01G17740 vs. ExPASy TrEMBL
Match: A0A5A7T0J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003890 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.7e-64
Identity = 138/168 (82.14%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   METIKN-GDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAG 60
           ME IKN  D+ KKMNKG+KLSQL +ASSR+LSKVRDFY++SLTDCSNHLDYGMALSGP G
Sbjct: 1   MENIKNVVDEKKKMNKGSKLSQLARASSRLLSKVRDFYVRSLTDCSNHLDYGMALSGPGG 60

Query: 61  QVPTNLPRSYSVGST-ASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVA 120
           QVPTNLPRSYSVGS+ ASSHGGDDYSELLRAAS+RSLSKKVEPDLE RKS     PKNV 
Sbjct: 61  QVPTNLPRSYSVGSSAASSHGGDDYSELLRAASVRSLSKKVEPDLEGRKS-----PKNVP 120

Query: 121 RSQSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAV--HGRSSRR 165
           RSQSVGIGRIDEDKTYEFED+FK SN NN YPRS+SYAV  H RSSRR
Sbjct: 121 RSQSVGIGRIDEDKTYEFEDEFKASNLNNLYPRSKSYAVPTHRRSSRR 163

[Close]

BLAST of Clc01G17740 vs. ExPASy TrEMBL
Match: A0A0A0KLJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495800 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 136/166 (81.93%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IKN D+ KKMNKG+KLSQL +ASSR+LSKVRDFYI+SLTDCSNHLDYGMALSGP GQVP 
Sbjct: 5   IKNVDEKKKMNKGSKLSQLARASSRLLSKVRDFYIRSLTDCSNHLDYGMALSGPGGQVPI 64

Query: 64  NLPRSYSVGST-ASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVARSQS 123
           NLPRSYSVGS+ ASSHGGDDYSELLRAAS+RSL KKVE DLEARKS     PKNV RSQS
Sbjct: 65  NLPRSYSVGSSAASSHGGDDYSELLRAASVRSLGKKVELDLEARKS-----PKNVPRSQS 124

Query: 124 VGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAV--HGRSSRRVY 167
           VGIGRIDEDKTYEFED+FK SN NN YPRS+SYAV  H RSSRR Y
Sbjct: 125 VGIGRIDEDKTYEFEDEFKGSNLNNLYPRSKSYAVHTHRRSSRRAY 165

[Close]

BLAST of Clc01G17740 vs. ExPASy TrEMBL
Match: A0A6J1BT69 (uncharacterized protein LOC111005494 OS=Momordica charantia OX=3673 GN=LOC111005494 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.9e-62
Identity = 125/160 (78.12%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IK G++ KKMNKG+KL +LVKAS R+LS+VRDFYI+SLT+CSNHLDYGMAL+GPAGQ+PT
Sbjct: 3   IKTGNEPKKMNKGSKLRELVKASGRLLSRVRDFYIRSLTECSNHLDYGMALTGPAGQLPT 62

Query: 64  NLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVARSQSV 123
           +LP+SYSVGSTASSHGGDDYSELLRAAS RSLSKK+EPDL+A +   M GP NV RSQSV
Sbjct: 63  HLPKSYSVGSTASSHGGDDYSELLRAASTRSLSKKIEPDLQAARKSPMAGPNNVPRSQSV 122

Query: 124 GIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSR 164
           GIGRIDE+KTYEFE+DFK SN ++AYPRSRSYAVH R SR
Sbjct: 123 GIGRIDEEKTYEFEEDFKPSN-SDAYPRSRSYAVHRRRSR 161

[Close]

BLAST of Clc01G17740 vs. ExPASy TrEMBL
Match: A0A6J1INU9 (uncharacterized protein LOC111478121 OS=Cucurbita maxima OX=3661 GN=LOC111478121 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.8e-56
Identity = 126/166 (75.90%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IKNG Q KK NK NKLSQL+KASSR+LSKVRDFY++SLTDCSNHLDYGMAL+GP  QVPT
Sbjct: 3   IKNGHQMKKSNKENKLSQLIKASSRLLSKVRDFYVRSLTDCSNHLDYGMALTGPTSQVPT 62

Query: 64  NLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLE---ARKSPMMGGPKNVARS 123
            LP+SYSVGST SSHG DD+ ELLRAAS RSLSK VEPD +   ARKSP M  P NV RS
Sbjct: 63  TLPKSYSVGSTVSSHGSDDFRELLRAASTRSLSKNVEPDFQIQAARKSP-MAEPNNVPRS 122

Query: 124 QSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSRRVY 167
           QSVGIGRIDE+KT EFE+DFKV N  +AYPRSRSYAV  R  RRVY
Sbjct: 123 QSVGIGRIDEEKTCEFEEDFKVCN-TDAYPRSRSYAV--RRRRRVY 164

[Close]

BLAST of Clc01G17740 vs. ExPASy TrEMBL
Match: A0A6J1GGE2 (uncharacterized protein LOC111453674 OS=Cucurbita moschata OX=3662 GN=LOC111453674 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.9e-56
Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 0


Query: 4   IKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPT 63
           IKNG Q KK NK NKLSQL+KASSR+LSKVRDFY++SLTDCSNHLDYGMA++GP  QVPT
Sbjct: 3   IKNGHQMKKSNKENKLSQLIKASSRLLSKVRDFYVRSLTDCSNHLDYGMAMTGPTSQVPT 62

Query: 64  NLPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLE---ARKSPMMGGPKNVARS 123
            LP+SYSVGST SSHG DD+ ELLRAAS RSLSK VEPD +   ARKSP M   KNV RS
Sbjct: 63  TLPKSYSVGSTVSSHGSDDFRELLRAASTRSLSKNVEPDFQIQGARKSP-MAEVKNVPRS 122

Query: 124 QSVGIGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSRRVY 167
           QSVGIGRIDE+K+ EFE+DFKV N  +AYPRSRSYAVH R  RRVY
Sbjct: 123 QSVGIGRIDEEKSCEFEEDFKVCN-TDAYPRSRSYAVHRR--RRVY 164

[Close]

BLAST of Clc01G17740 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 )

HSP 1 Score: 72.8 bits (177), Expect = 2.9e-13
Identity = 58/165 (35.15%), Postives = 81/165 (49.09%), Query Frame = 0


Query: 17  NKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPTNLPRSYSVGSTAS 76
           +K  +++    R L K RDFY++S+T C+    Y  + S     V    PRS S  S A 
Sbjct: 6   SKFLRIISTPLRALGKARDFYVRSITGCAARTQYSSSAS-----VSAPFPRSRSSSSAAF 65

Query: 77  SHGG-----------DDYSELLRAASIRSLSKKVEPD------LEARKSPMMGGPKNVAR 136
           S              +DYSEL+RAAS+RSL  K E D      L+ +K    GG   + +
Sbjct: 66  SSSASSRRTTDFGIDEDYSELVRAASVRSLGHKNEIDMLIQEKLQQQKQQKQGG---LPK 125

Query: 137 SQSVGIGRIDEDKTYE-------FEDDFKVSNFNNAYPRSRSYAV 158
           S S G+ RI+E++  E        +   KVS+    YPRS+SYAV
Sbjct: 126 SSSAGMARIEEEEETEEGSVNPKVKKTKKVSDL--LYPRSKSYAV 160

[Close]

BLAST of Clc01G17740 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 59/177 (33.33%), Postives = 86/177 (48.59%), Query Frame = 0


Query: 10  GKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPTNLPRSY 69
           GK+  K N+  ++V    ++L K RD Y++S+T C+    Y  A+   +   P +   S 
Sbjct: 2   GKRGQKQNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTSS 61

Query: 70  SVGSTASSHG-------GDDYSELLRAASIRSLSKKVEPDLEARKSPM-----------M 129
           +  S+ASS          DDYSELLRAAS+RSL  K E D+  ++              M
Sbjct: 62  AFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQQRQENRVAM 121

Query: 130 GG---PKNVARSQSVG--IGRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAVHGRSSR 164
           G       + +S SVG  + RIDE+   E     +    +  YPRSRS+AV  R S+
Sbjct: 122 GAVTVKGGLPKSSSVGMTMARIDEEDEEEGSVKNQKKGSDFLYPRSRSHAVTIRGSK 178

[Close]

BLAST of Clc01G17740 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 15  KGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNH--LDYGMALSGPAGQVPTNLPRSYSVG 74
           K  KLS+ +K   +ML K RD YI+S+   S+H     GM+   P   V T LPRS+S  
Sbjct: 5   KETKLSKYIKVPIKMLVKARDMYIRSMNQFSSHDLPGSGMSFGIPVCNVST-LPRSFSAS 64

Query: 75  STASSHGGDD--YSELLRAASIRSLS---KKVEPD--LEARKSPMMGGPKNVARSQSVGI 134
            +  S   +D   ++L+RAAS R+ +    + EP    +A+ S   GG +        G 
Sbjct: 65  HSQYSVRAEDDRVAKLVRAASARNATIDGARHEPSKLRKAKSSRSCGGHR--------GF 124

Query: 135 GRIDEDKTYEFEDDFKVSNFNNAYPRSRSYAV 158
            +IDE             + +  + RS+SY+V
Sbjct: 125 EKIDEASPL-----ISFGSKHKMFQRSKSYSV 142

[Close]

BLAST of Clc01G17740 vs. TAIR 10
Match: AT3G49820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 5.0e-05
Identity = 43/143 (30.07%), Postives = 65/143 (45.45%), Query Frame = 0


Query: 9   QGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPTN---- 68
           + K + K N    LVKA  R+L   RD YI+S+T CS    Y    S   GQ+  N    
Sbjct: 2   KAKVIEKENCFVWLVKAPFRLLIMARDAYIRSITSCSGAGIYSGGGSSGFGQLSGNFQIC 61

Query: 69  ------LPRSYSVGSTASSHGGDDYSELLRAASIRSLSKKVEPDLEARKSPMMGGPKNVA 128
                 LPRS+++ S A   G               L++  +P +  R+S  +   KN  
Sbjct: 62  DPPSTALPRSFTLTSAAHDQG--------------CLTRGGQPTIAMRQSLSLDHRKN-- 121

Query: 129 RSQSVGIGRIDEDKTYEFEDDFK 142
               V +GRIDE+ + + +D+F+
Sbjct: 122 NRCVVVMGRIDEEMSCDDDDEFQ 128

The following BLAST results are available for this feature:

BLAST of Clc01G17740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036403.1	7.7e-64	82.14	uncharacterized protein E6C27_scaffold18G002050 [Cucumis melo var. makuwa] >TYK1...	[more]
KGN48992.2	5.5e-62	82.32	hypothetical protein Csa_003129 [Cucumis sativus]	[more]
XP_022132695.1	1.2e-61	78.13	uncharacterized protein LOC111005494 [Momordica charantia]	[more]
XP_023543992.1	2.0e-56	75.90	uncharacterized protein LOC111803699 [Cucurbita pepo subsp. pepo]	[more]
XP_022978000.1	5.9e-56	75.90	uncharacterized protein LOC111478121 [Cucurbita maxima]	[more]

BLAST of Clc01G17740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G17740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0J1	3.7e-64	82.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KLJ6	3.1e-63	81.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495800 PE=4 SV=1	[more]
A0A6J1BT69	5.9e-62	78.13	uncharacterized protein LOC111005494 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1INU9	2.8e-56	75.90	uncharacterized protein LOC111478121 OS=Cucurbita maxima OX=3661 GN=LOC111478121...	[more]
A0A6J1GGE2	4.9e-56	75.30	uncharacterized protein LOC111453674 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]

BLAST of Clc01G17740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10140.1	2.9e-13	35.15	Uncharacterised conserved protein UCP031279	[more]
AT1G58420.1	1.5e-12	33.33	Uncharacterised conserved protein UCP031279	[more]
AT4G37700.1	1.7e-05	31.58	unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bac...	[more]
AT3G49820.1	5.0e-05	30.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016972	Uncharacterised conserved protein UCP031279	PIRSF	PIRSF031279	UCP031279	coord: 9..164 e-value: 1.3E-25 score: 88.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..118
None	No IPR available	PANTHER	PTHR33526	OS07G0123800 PROTEIN	coord: 11..160
None	No IPR available	PANTHER	PTHR33526:SF4	OS07G0123800 PROTEIN	coord: 11..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G17740.1	Clc01G17740.1	mRNA