Clc01G17680 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G17680
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Cyclin-D1-1-like
Location	ClcChr01: 30315446 .. 30317771 (-)
RNA-Seq Expression	Clc01G17680
Synteny	Clc01G17680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTGTCAGGCGGCGGAGGCGGCGACGGTGGTGATTCAGCACCCTGGGAATCAAAAGATCGAGAGGATTTATTGGTCGGTAAGTGCACACGAAATCATGAACTCTAACCCCGGCCATTACGTTGCCCTCCTTCTCACCTCCTCCACTATGAAGACCGAAAATGGAAACCCAATTAAGCAGCTCAAGCTCCTCCGCCCCGATGACACGCTTCTCATCGGCCACGTTTATCGTCTCATCACATTCGAAGGTATTTTCCCTTTTTCTTTAACTATATACTTACTCATTATGAAATATCTTTATACATCTCTCGATTATTATAAAATGTACAAAGTTTCGTTTTTCTTTTTCTTTTTCTTTTTTTTAAAAAAAAAAGAAAAAAAAAAGAAAAGAACTTGTAGGACCCTACATCATTGTGGTAGTCTTAAATAATTTATCTTTACTTTGAGCTTTAAATCACACACATATAGATGTATATTTTTTTTTGAAACTCTAAATTTAAATTTTTGTAAGGGATTCTAAATTGTAAACTTAAAATACAATTTGGGTCACACCTATTTTTATTTTTATGCATTCTACCAAACTATCCAATAATAATTAGACAAGTGACAAATTTTTATATTTGTTGTGAAATATTTTAATTTTTTTTTTTTTTTTTTTTTGTTTATAGGAGTAAAAAAGATACCTAATTTAATTATTAGTTGACATTTTTAAAAATAAATAGATAACCGTATTTTGAACTTACATAAAATGATTTTTTTTTTTTGTTTTAATAATATGAGGAGGTCAAACTATAGCTTCGAAGTTAAAAATGTATTTTATGCTAGTTGAGACATGCTCATTTTGACAGATAAAATGGTTTTTGGAACAAATTGCCAACTAGCAACTATGTTTAACACTTGGTTATTATTATTATTTTGTTGATATGTGAGTTGGTGTCCATCCCTGACAAGATTGAATCAACTAAATGAATAAAATTCAACTATTATATATATATATATATTAGTAATTAAGAAGTCTATGATTCGAATATATCATGATATTGTACTAAAAAAGATTGGATCAACCCATATTTTGTTTATTATTACTCATGTCAAATGTTTTTTTTTTTTTTCATCTGAAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATGAAGGGCTCAGATTCTGCTTCAAATCCAAATGCTAATTCTAATTCCGAAAATTACATGAAGGTAATCAAATACCCATAACCCTTAATCATACTCCAAATCCCAAAAAGTGGATCTTTTTTATTTTTTAAAAAAATCCCATTGGTTTAGGAAAATATTGCGATTTATTGAATTTCGTTTTCATGATTGCACTCTGATTAAAGCCAAAAAATAAAAGAAAAAACAAAAAGTTGTTTTTCTGAATAAAGAAGCATCTGAAATTGGTTTGAAATTTAAGGCCACGGATATCGAGGGAAAAGGCTTTTTATGGGTCACTTCATGAATCTTGTCAGAAATTGAAGTAGAGCTGTATAGTGCACAGGTATTTATTTTTATTTCTTAAGTCAAATATTCACTCAACCCATTTTTTTTTCTTTTCTGAAAATTCAACCCCATTATAAATTAATTAGGATTGAAAGAAAGAAAATAAATAAATAAAAGAAGAAAATTTTAATCAGCTTTTGCAAGCATTCCCTGCATGCTGTGTCTTGTGGATTTAGAAAAGGGAACAAAAAAAAGGAGAAAAAAAAAAAAACAGTTTGCTTAACTTAAAAGTTGAATTAATTATTCAAGGGACCAAATCATAATGGGCCTTTGCCTGTATATTGAAACTAACTCATTTTGAATTTGAGTTCCATTTCCCACTGACTTCAACAACAATTTAAGCATTTAAATTTACTATAATCTTTTGAAACCTTTAGCTAGTGGGGCTCTTTTCAAAACAACACTTTCTTTTTCCCCCTAAATCGAAATAACATGGCCTTTTCTTTGATCATAATCATAAAGTTGAAAGATATTTATTGGTTTCCTGTTTGCAAAGTCTAAATCCAATATCTTCAAATCAACGTGAACATTCCTACTTTTTCATCATTGGGGTCAAATCAAAACATGATATGCTAAAATCATTCTTTTGATCAATATGGTCAGGCGGAGCAGGTTGCCGGGCATAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGCGGAGGAGGACAAAGAGGTATGGGAAGGCATTATGGTGGTGGAAGTCAATGGAGGCCAGCTTTACAGAGCATTGCAGAAATTGAAATTAATTGA

mRNA sequence

ATGGGGAACTGTCAGGCGGCGGAGGCGGCGACGGTGGTGATTCAGCACCCTGGGAATCAAAAGATCGAGAGGATTTATTGGTCGGTAAGTGCACACGAAATCATGAACTCTAACCCCGGCCATTACGTTGCCCTCCTTCTCACCTCCTCCACTATGAAGACCGAAAATGGAAACCCAATTAAGCAGCTCAAGCTCCTCCGCCCCGATGACACGCTTCTCATCGGCCACGTTTATCGTCTCATCACATTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATGAAGGGCTCAGATTCTGCTTCAAATCCAAATGCTAATTCTAATTCCGAAAATTACATGAAGGCGGAGCAGGTTGCCGGGCATAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGCGGAGGAGGACAAAGAGGTATGGGAAGGCATTATGGTGGTGGAAGTCAATGGAGGCCAGCTTTACAGAGCATTGCAGAAATTGAAATTAATTGA

Coding sequence (CDS)

ATGGGGAACTGTCAGGCGGCGGAGGCGGCGACGGTGGTGATTCAGCACCCTGGGAATCAAAAGATCGAGAGGATTTATTGGTCGGTAAGTGCACACGAAATCATGAACTCTAACCCCGGCCATTACGTTGCCCTCCTTCTCACCTCCTCCACTATGAAGACCGAAAATGGAAACCCAATTAAGCAGCTCAAGCTCCTCCGCCCCGATGACACGCTTCTCATCGGCCACGTTTATCGTCTCATCACATTCGAAGATGTACTGAAGGAGTTTGCTGCAAAGAAATGTGTGAAATTAGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCGGTTGGGATGAAGATGAAGGGCTCAGATTCTGCTTCAAATCCAAATGCTAATTCTAATTCCGAAAATTACATGAAGGCGGAGCAGGTTGCCGGGCATAGCAACGCCGGAAGCAGCGGCGGTGGAAGAGGCGGAGGAGGACAAAGAGGTATGGGAAGGCATTATGGTGGTGGAAGTCAATGGAGGCCAGCTTTACAGAGCATTGCAGAAATTGAAATTAATTGA

Protein sequence

MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSASNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAEIEIN

Homology

[Close]

BLAST of Clc01G17680 vs. NCBI nr
Match: XP_038883937.1 (uncharacterized protein LOC120074768 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 171/183 (93.44%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSST KTENG PI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTTKTENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSD-S 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMK+KGSD S
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDNS 120

Query: 121 ASNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAEI 180
           ASNPNANS S+NYMK EQ  G S+AGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAEI
Sbjct: 121 ASNPNANSKSQNYMKPEQDGGRSDAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAEI 180

Query: 181 EIN 183
            IN
Sbjct: 181 GIN 183

[Close]

BLAST of Clc01G17680 vs. NCBI nr
Match: XP_004141857.1 (uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical protein Csa_004276 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 168/186 (90.32%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALL+TSSTMK+ENG PI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSA 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMK+KGSDS 
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSNSENYMKAEQVAGH----SNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSI 180
           SNPNANS S+NYMK EQ A H    SNAGSSGGGR   GQRGMGRHYGGGSQWRPALQSI
Sbjct: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQSI 180

Query: 181 AEIEIN 183
           AEI IN
Sbjct: 181 AEIGIN 183

[Close]

BLAST of Clc01G17680 vs. NCBI nr
Match: XP_016899236.1 (PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALL+TSST+K+ENG PI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSA 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMK+KGSDS 
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSNSENYMKA--EQVAGH----SNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQ 180
           SNPNANS S+NYMK+  EQ A H    S+AGSSGGGR   GQRGMGRHYGGGSQWRPALQ
Sbjct: 121 SNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGR---GQRGMGRHYGGGSQWRPALQ 180

Query: 181 SIAEIEIN 183
           SIAEI IN
Sbjct: 181 SIAEIGIN 185

[Close]

BLAST of Clc01G17680 vs. NCBI nr
Match: XP_023003398.1 (uncharacterized protein LOC111497021 [Cucurbita maxima])

HSP 1 Score: 298.9 bits (764), Expect = 3.0e-77
Identity = 156/187 (83.42%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNP 60
           MGNCQAAEAATVVIQHPG N +IERIYWSVSAH+IMNSNPGHYVAL++TSST+KT+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPGINPRIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDS 120
           IK LKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMK K +DS
Sbjct: 61  IKHLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKKKDTDS 120

Query: 121 ASNPNANSNSENYMKAEQVAG----HSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQS 180
           ASNPN+NS S+NYMKAEQ  G    + +AGSS GGRGGGG RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIEIN 183
           IAE+ IN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of Clc01G17680 vs. NCBI nr
Match: XP_022963138.1 (uncharacterized protein LOC111463436 [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 1.5e-76
Identity = 155/187 (82.89%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+KT+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMK+  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120

Query: 121 ASNPNANSNSENYMKAEQVAG----HSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQS 180
           ASNPN+NS S+NYMKAEQ  G    + +AGS  GGRGGGG RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIEIN 183
           IAE+ IN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of Clc01G17680 vs. ExPASy TrEMBL
Match: A0A0A0KLJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.7e-83
Identity = 168/186 (90.32%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALL+TSSTMK+ENG PI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTMKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSA 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMK+KGSDS 
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSNSENYMKAEQVAGH----SNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSI 180
           SNPNANS S+NYMK EQ A H    SNAGSSGGGR   GQRGMGRHYGGGSQWRPALQSI
Sbjct: 121 SNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGR---GQRGMGRHYGGGSQWRPALQSI 180

Query: 181 AEIEIN 183
           AEI IN
Sbjct: 181 AEIGIN 183

[Close]

BLAST of Clc01G17680 vs. ExPASy TrEMBL
Match: A0A1S4DTC0 (uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALL+TSST+K+ENG PI
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITSSTLKSENGTPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSA 120
           KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMK+KGSDS 
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDSG 120

Query: 121 SNPNANSNSENYMKA--EQVAGH----SNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQ 180
           SNPNANS S+NYMK+  EQ A H    S+AGSSGGGR   GQRGMGRHYGGGSQWRPALQ
Sbjct: 121 SNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGR---GQRGMGRHYGGGSQWRPALQ 180

Query: 181 SIAEIEIN 183
           SIAEI IN
Sbjct: 181 SIAEIGIN 185

[Close]

BLAST of Clc01G17680 vs. ExPASy TrEMBL
Match: A0A6J1KWE0 (uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.4e-77
Identity = 156/187 (83.42%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNP 60
           MGNCQAAEAATVVIQHPG N +IERIYWSVSAH+IMNSNPGHYVAL++TSST+KT+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPGINPRIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDS 120
           IK LKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMK K +DS
Sbjct: 61  IKHLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKKKDTDS 120

Query: 121 ASNPNANSNSENYMKAEQVAG----HSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQS 180
           ASNPN+NS S+NYMKAEQ  G    + +AGSS GGRGGGG RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIEIN 183
           IAE+ IN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of Clc01G17680 vs. ExPASy TrEMBL
Match: A0A6J1HGV9 (uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC111463436 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.2e-77
Identity = 155/187 (82.89%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNP 60
           MGNCQAAEAATVVIQHPG N KIERIYWSVSAH+IMNSNPGHYVAL++TSST+KT+NG P
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTSSTLKTQNGTP 60

Query: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDS 120
           IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALS+GMK+  ++S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTNS 120

Query: 121 ASNPNANSNSENYMKAEQVAG----HSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQS 180
           ASNPN+NS S+NYMKAEQ  G    + +AGS  GGRGGGG RGMGRHYGGG QWRPALQS
Sbjct: 121 ASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQS 180

Query: 181 IAEIEIN 183
           IAE+ IN
Sbjct: 181 IAEVGIN 187

[Close]

BLAST of Clc01G17680 vs. ExPASy TrEMBL
Match: A0A6J1GER4 (uncharacterized protein LOC111453516 OS=Cucurbita moschata OX=3662 GN=LOC111453516 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.4e-72
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATVVI HPGN KIERIYWSVSAHE+MNSNPGHYVALLLTSST  ++NGNPI
Sbjct: 1   MGNCQAAEAATVVIHHPGNHKIERIYWSVSAHEVMNSNPGHYVALLLTSSTFNSQNGNPI 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSA 120
           KQLKLLRPDDTLLIGHVYRLI+FEDVLKEFAAKKCVKLGKLL+EGGALSVGMK+K SDSA
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLISFEDVLKEFAAKKCVKLGKLLREGGALSVGMKIKPSDSA 120

Query: 121 SNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAEIE 180
           SN     +S+N+ K E+    SNAGSSGGG GGGGQR MG+HYGGG QWRPALQSIAE  
Sbjct: 121 SN-----SSQNHRKPERRLESSNAGSSGGG-GGGGQRSMGKHYGGGCQWRPALQSIAEFG 176

Query: 181 IN 183
           IN
Sbjct: 181 IN 176

[Close]

BLAST of Clc01G17680 vs. TAIR 10
Match: AT5G67620.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48
Identity = 109/191 (57.07%), Postives = 125/191 (65.45%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAATV+I HP   K+ERIYWSV+A +IM SNPGHYVA+++TS TMK E G P+
Sbjct: 1   MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKGLPL 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSV--------GM 120
           KQLKLLRPDDTLLIGHVYRL++FE+VL EFA KKCVKLGKLLKEGG L +          
Sbjct: 61  KQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKEGGGLDLTKKKTKHRKK 120

Query: 121 KMKGSDSASNPNANSNSENYMKAEQVAGHSNAG-----SSGGGRGGGGQRGMGRHYGGGS 179
           K+       NPN++ N         VAG +        S GGGRGGGG            
Sbjct: 121 KLDQETGKVNPNSDPNPNQDGADNAVAGENGGDGFMRRSHGGGRGGGG------------ 178

[Close]

BLAST of Clc01G17680 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-21
Identity = 75/181 (41.44%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTMKTENGNPI 60
           MGNCQAAEAAT VIQ P  + + R Y +V+A E++ S+PGH+VALLL SS +       +
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSV-RFYCTVNASEVIKSHPGHHVALLL-SSAVPHGGSLRV 60

Query: 61  KQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMKGSDSA 120
            ++KLLRP D LL+GHVYRLI+ E+V+K   AKK    GK+ K  G  SV      ++  
Sbjct: 61  TRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKS---GKMKKIHGEFSV------AEEE 120

Query: 121 SNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQ---WRPALQSIA 179
            NP    +     K  Q   H              QRGM    G  ++   W+P+LQSI+
Sbjct: 121 INPLTLRSESASDKDTQRRIHEK------------QRGMMNTGGATNKVRAWQPSLQSIS 158

[Close]

BLAST of Clc01G17680 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 4.2e-21
Identity = 71/183 (38.80%), Postives = 96/183 (52.46%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTS---STMKTENG 60
           MGNCQA + A VVIQHP N K E++   VSA  +M  NPGH V+LL+++   S+  + +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  NPIK--QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMK 120
            P++  ++KLLRP DTL++GHVYRLIT ++V+K   AKKC KL K            + K
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKK------------ESK 120

Query: 121 GSDSASNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQS 179
           GSD         NS      +Q    S    S                     W+P+LQS
Sbjct: 121 GSDDKLEMVKAINSTKLDNEDQEKERSRISRS---------------------WQPSLQS 149

[Close]

BLAST of Clc01G17680 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-21
Identity = 72/189 (38.10%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTS---STMKTENG 60
           MGNCQA + A VVIQHP N K E++   VSA  +M  NPGH V+LL+++   S+  + +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  NPIK--QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKMK 120
            P++  ++KLLRP DTL++GHVYRLIT ++V+K   AKKC KL K            + K
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKK------------ESK 120

Query: 121 GSD------SASNPNANSNSENYMKAEQVAGHSNAGSSGGGRGGGGQRGMGRHYGGGSQW 179
           GSD       A N     N +     +Q    S    S                     W
Sbjct: 121 GSDDKLEMVKAINSTKLDNEDQLQMKKQEKERSRISRS---------------------W 155

[Close]

BLAST of Clc01G17680 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALL-------LTSSTMK 60
           MGNCQA +AA +V+QHP + KI+R Y  VS  EIM   PGHYV+L+       + ++T  
Sbjct: 1   MGNCQAVDAAALVLQHP-DGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTT 60

Query: 61  TENGNPIK-----QLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGAL 120
           T++ +  K     ++KLLRP + L++GH YRLIT ++V+K   AKK  K  K   E    
Sbjct: 61  TDDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKHQSE---T 120

Query: 121 SVGMKMKGSDSASNPNANSNSENYMKAE-QVAGHSNAGSSGGGRGGGGQRGMGRHYGGGS 179
           S   K   S+   +  ++ N     K E Q +  +N+ SS                    
Sbjct: 121 SKEKKKPSSEKKIDEESDKNQNLETKDEKQRSVLTNSASS-----------------RSK 170

The following BLAST results are available for this feature:

BLAST of Clc01G17680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883937.1	3.9e-85	93.44	uncharacterized protein LOC120074768 [Benincasa hispida]	[more]
XP_004141857.1	1.8e-82	90.32	uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical ...	[more]
XP_016899236.1	2.9e-80	88.30	PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]	[more]
XP_023003398.1	3.0e-77	83.42	uncharacterized protein LOC111497021 [Cucurbita maxima]	[more]
XP_022963138.1	1.5e-76	82.89	uncharacterized protein LOC111463436 [Cucurbita moschata]	[more]

BLAST of Clc01G17680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G17680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLJ3	8.7e-83	90.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1	[more]
A0A1S4DTC0	1.4e-80	88.30	uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=...	[more]
A0A6J1KWE0	1.4e-77	83.42	uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021...	[more]
A0A6J1HGV9	7.2e-77	82.89	uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1GER4	2.4e-72	82.42	uncharacterized protein LOC111453516 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]

BLAST of Clc01G17680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67620.1	3.1e-48	57.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G62900.1	2.5e-21	41.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	4.2e-21	38.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G50090.1	5.5e-21	38.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G60010.1	1.3e-17	36.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..178 e-value: 4.8E-30 score: 105.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..168
None	No IPR available	PANTHER	PTHR33413:SF1	EXPRESSED PROTEIN	coord: 1..179
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 1..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G17680.2	Clc01G17680.2	mRNA