Clc01G17490 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G17490
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionFormin-like protein 6
LocationClcChr01: 30199195 .. 30200461 (+)
RNA-Seq ExpressionClc01G17490
SyntenyClc01G17490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAACCCATAATTAATTACCATTAAAGCTTTTTCGACCTAGCAGTTCTGATTTTTGAATCTTCTTGAACACAAACCGTAATTATTCGCCATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAGCCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAATTTCCTCAGGACCCAAAGATTTTTCTGTTCTTGGAAGAAACCGAGGTTGTTTGTTTCTTCAGTGTTATTTTGGTTGAGAAAAAAAATGGAATTGCGAGAGTTCATTTTGCTTAGTCGTACGAAGTAAATTTTGATTTCATTTCTTGATCTGTGATGTACACAAAGAATACAAATTGGGGCAATCAAAAGAACAAAAATTTTACAGATTGAATTTGTTTATACAAAAAAAATACAGGTTTTCATCCCTGGCCTCTCATTATATGGTTTCTATCGTCAAAAAGAATGGTGTTCTTGCTACTCCCTTCGTCCTTAGAATCTTTTTTACTAACAATTTC

mRNA sequence

AAAAAAAAAAAAACCCATAATTAATTACCATTAAAGCTTTTTCGACCTAGCAGTTCTGATTTTTGAATCTTCTTGAACACAAACCGTAATTATTCGCCATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAGCCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAATTTCCTCAGGACCCAAAGATTTTTCTGTTCTTGGAAGAAACCGAGGTTGTTTGTTTCTTCAGTGTTATTTTGGTTGAGAAAAAAAATGGAATTGCGAGAGTTCATTTTGCTTAGTCGTACGAAGTAAATTTTGATTTCATTTCTTGATCTGTGATGTACACAAAGAATACAAATTGGGGCAATCAAAAGAACAAAAATTTTACAGATTGAATTTGTTTATACAAAAAAAATACAGGTTTTCATCCCTGGCCTCTCATTATATGGTTTCTATCGTCAAAAAGAATGGTGTTCTTGCTACTCCCTTCGTCCTTAGAATCTTTTTTACTAACAATTTC

Coding sequence (CDS)

ATGAAACCTTCTTTTCTCATCTTCTTTCTCAGTTTGGATTTGTTGGTTCTTCTCAATCATCCTCGCGTCAATGCCAATAGTCAAAGAAGAAGTTTGCACCAGCCATTGGATCCTACCACATTCTCGTCGCCGCCGTCTCCACCGCCGCCGCTTGGGTCTGCAGATTCCAACCAACCAACTCCTGCCCCTTCGAATGTCTCTCTGCCTAATCTACCCTCGTCGACACAACAATCTTTTAAACCAATCAAAACTTTGGGGATTGTATGCTCTGTTGCGATTGTGACTCTGGGAATGCTATCGGCGCTTGCCTTCTTTCTGTATCGGCAGCGGATTAAGTACCGATGCAAGTCTCGTATGCTCGTCGAGAAGGAGCGTTCTCTGAGTTTTCGGCCTGATTCTGGTATCCCACCATCGAGTTTCTTGAATTTCGGAACCATGGAACGGAGGCCGTGCTCGATCATCGAGCGGAAGGGTGGAAAGGGAGAAGATCAATCTTCGCCGCATCGGCCGGTGGATTCTGTGAATAAATTGGATTCTCACCTTCTTAGCCCTGAGTTGCAGCCACTGCCTCCTCTCTCGCAAAATCAGATCGTAAATCCATCATTTGAGACGCCCTTGTCCGATGACGAGAGCCGAGAGACAGTATTTCACACGCCGGAGTGGTCGGCGGCGGTTTCCTACGGCGGTGGTGTTTTTCCTAAAAGCAAAAGAGAATCTCGCAGCCACTCGCTCAATGTTCAAGCCAAAGGAACTTCTCCTTTACCTTATTTAGAGGATTCGTCGATAAAACAGGATGCAGCGTCTACGCCGCCACATCCGACGACAACGTTATAA

Protein sequence

MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPPLGSADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRSHSLNVQAKGTSPLPYLEDSSIKQDAASTPPHPTTTL
Homology
BLAST of Clc01G17490 vs. NCBI nr
Match: KAA0036422.1 (Formin-like protein 6 [Cucumis melo var. makuwa] >TYK12818.1 Formin-like protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 424.9 bits (1091), Expect = 5.5e-115
Identity = 236/284 (83.10%), Postives = 246/284 (86.62%), Query Frame = 0

Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPS----PPPPLGSADS 60
           MK SFLIF LSLD LV+LNH RVNA+S RRSLHQPLDP TFSSPPS    PPPPL SA S
Sbjct: 1   MKISFLIFILSLDSLVVLNHLRVNADSWRRSLHQPLDPATFSSPPSPPPPPPPPLESAHS 60

Query: 61  NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCK 120
           +QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR K
Sbjct: 61  DQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRYK 120

Query: 121 SRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNK 180
           SRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI ERKG KGED+SSP R VDSV K
Sbjct: 121 SRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIDERKGRKGEDESSPDRRVDSVKK 180

Query: 181 LDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSK 240
           LDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG     K
Sbjct: 181 LDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG-----K 240

Query: 241 RESRSHSLNVQAKGTSPLPYLEDSSIKQD----AASTPPHPTTT 277
           RESR++ L+V+ KGTSPLPYLE S IKQD    AAS PPHPT T
Sbjct: 241 RESRNNLLSVEPKGTSPLPYLEGSLIKQDHRRPAASPPPHPTAT 279

BLAST of Clc01G17490 vs. NCBI nr
Match: KAG6594983.1 (Formin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.8 bits (961), Expect = 6.5e-100
Identity = 203/271 (74.91%), Postives = 223/271 (82.29%), Query Frame = 0

Query: 7   IFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPSPPPPLGSADSNQPTPAPSNV 66
           IFF SL L +L   PRVN +S+RRSLHQPLDP TF    SPPPP GSA+S+QPTPAPSNV
Sbjct: 7   IFFFSLQLFLLFIDPRVNGDSRRRSLHQPLDPATF---VSPPPPGGSANSDQPTPAPSNV 66

Query: 67  SLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERS 126
           S+PNLPSS QQSFKPIKT+GIVCSVAIVTLGMLSALAFFLY QRIKYRCKSRMLV+KER 
Sbjct: 67  SMPNLPSSAQQSFKPIKTMGIVCSVAIVTLGMLSALAFFLYWQRIKYRCKSRMLVDKERC 126

Query: 127 LSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNKLDSHLLSPEL 186
           LSFR DSGIP SSFLNFGTME+R CS +E KG  G+D+S   R VDSV K DS LLSPEL
Sbjct: 127 LSFRADSGIPQSSFLNFGTMEQRSCSSVEPKGVNGQDESPAQRRVDSVKKWDSRLLSPEL 186

Query: 187 QPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRSHSLNV 246
            PLPPL   QI NPSFET LSDDESRETVFHTPEW+AAVSYGGG+FP+SK+E+R  S  V
Sbjct: 187 HPLPPLPHQQIGNPSFETTLSDDESRETVFHTPEWTAAVSYGGGIFPRSKKETRYGSPIV 246

Query: 247 QAKGTSPLPYLEDSSIKQD----AASTPPHP 274
            A+GTSPLPYL++S IKQD    AAS PP P
Sbjct: 247 HAQGTSPLPYLQESLIKQDYRRPAASPPPPP 274

BLAST of Clc01G17490 vs. NCBI nr
Match: KAE8647520.1 (hypothetical protein Csa_003054 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-72
Identity = 154/184 (83.70%), Postives = 161/184 (87.50%), Query Frame = 0

Query: 98  MLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERK 157
           MLSALAFFLYRQRIKYR KSRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI+ERK
Sbjct: 1   MLSALAFFLYRQRIKYRYKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERK 60

Query: 158 GGKGEDQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFH 217
           GGKGED SSP R VDSV KLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFH
Sbjct: 61  GGKGEDGSSPDRRVDSVKKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFH 120

Query: 218 TPEWSAAVSYGGGVFPKSKRESRSHSLNVQAK-GTSPLPYLEDSSIKQD----AASTPPH 277
           TPEW+AAV Y GG     KRESR++SL+V+ K GTSPLPYLEDS IKQD    AAS PPH
Sbjct: 121 TPEWAAAVPYSGG-----KRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPH 179

BLAST of Clc01G17490 vs. NCBI nr
Match: XP_023532921.1 (formin-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.7 bits (400), Expect = 7.3e-35
Identity = 123/308 (39.94%), Postives = 157/308 (50.97%), Query Frame = 0

Query: 4   SFLIFFLSL--DLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPS-----PPPPLGS--- 63
           SF IFFLSL    +   +  R +A S RR LHQPL P     PP      PPPP  S   
Sbjct: 7   SFFIFFLSLFTSFIGAFSLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPPDSPSD 66

Query: 64  -----------ADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSAL 123
                       D  QP P  +N ++P +P++T Q  KP KT+ I  SV IVTLGMLSAL
Sbjct: 67  VPPFFHDPPTTQDQTQPPPPSTNGTMP-IPAATAQQSKPTKTVAIAISVGIVTLGMLSAL 126

Query: 124 AFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGE 183
           AFFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S++E+ G  G 
Sbjct: 127 AFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGA 186

Query: 184 DQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWS 243
           + SSP+R ++S+   D +  SPELQPLPPL +  +         SDDES+ T FHTP+ S
Sbjct: 187 N-SSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQCS 246

Query: 244 AAVSYGGGVFPKSKRESRS-----------HSLNVQA------KGTSPLPYLEDSSIKQD 274
           + VS+  G F  + R S S             +N  A      K TSP      SS K++
Sbjct: 247 SIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNAPPIPHSKRTSPKSRFSVSSTKRN 306

BLAST of Clc01G17490 vs. NCBI nr
Match: KAG7035193.1 (Formin-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-34
Identity = 123/307 (40.07%), Postives = 157/307 (51.14%), Query Frame = 0

Query: 4   SFLIFFLSLDLLVLLNHP--RVNANSQRRSLHQPLDPTTFSSPP----SPPPPLGS---- 63
           SF IF LSL    +   P  R +A S RR LHQPL P     PP    +PPPP  S    
Sbjct: 7   SFFIFSLSLFTSFIGAFPLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPDSPSDV 66

Query: 64  ----------ADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALA 123
                      D  QP P  +N ++P +P++T Q  KP KT+ I  SV IVTLGMLSALA
Sbjct: 67  PPFFHDPPTTQDQTQPPPPSTNGTMP-IPAATAQQSKPTKTVAIAISVGIVTLGMLSALA 126

Query: 124 FFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGED 183
           FFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S++E+ G  G +
Sbjct: 127 FFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGAN 186

Query: 184 QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSA 243
            SSP+R ++S+   D +  SPELQPLPPL +  +         SDDES+ T FHTP+ S+
Sbjct: 187 -SSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQCSS 246

Query: 244 AVSYGGGVFPKSKRESRS-----------HSLNVQA------KGTSPLPYLEDSSIKQDA 274
            VS+  G F  + R S S             +N  A      K TSP      SS K++ 
Sbjct: 247 IVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNAPPIPHSKRTSPKSRFSVSSTKRNT 306

BLAST of Clc01G17490 vs. ExPASy Swiss-Prot
Match: Q9FJX6 (Formin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=FH6 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.4e-26
Identity = 107/271 (39.48%), Postives = 138/271 (50.92%), Query Frame = 0

Query: 23  VNANSQRRSLHQPLDPTTFSSPP-----SPPPPLGSADSN-------------------Q 82
           V++ + RR LHQPL P + + PP     +P PPL                          
Sbjct: 22  VSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQQTLFPPPPP 81

Query: 83  PTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSR 142
           P  A  N  LP +P++T QS KP K + IV SV IVTLGMLSALAFFLYR + K+   ++
Sbjct: 82  PVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRHKAKHASDTQ 141

Query: 143 MLV----EKERSLSFRPDSGIP---PSSFLNFGTMERRPCSIIERKGG-KGEDQSSPHRP 202
            LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G   SSP+R 
Sbjct: 142 KLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNGPVNSSPYRK 201

Query: 203 VDSVNKLDSHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETVFHTPEWSAA 254
           ++S  + + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T F+TP  SA 
Sbjct: 202 LNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTAFYTPHGSAI 261

BLAST of Clc01G17490 vs. ExPASy Swiss-Prot
Match: Q10Q99 (Formin-like protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=FH8 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 86/325 (26.46%), Postives = 118/325 (36.31%), Query Frame = 0

Query: 3   PSFLIFFLSLDLLVLLNHPRVNA-------NSQRRSLHQPLDPTTFSSPPSPPPP----L 62
           P  +  F+++  ++L  H  V A        S RR LHQPL P  ++ PPSPPPP     
Sbjct: 2   PPAIARFVAIAAVLLCGHVAVAAESGGVGGGSARRVLHQPLFPIEWTPPPSPPPPPAPDF 61

Query: 63  GSADSNQPTP-APSNVSLPNLPSSTQQSFKP----------------------------- 122
            S  S  P P APS    P  P +T     P                             
Sbjct: 62  TSDPSTPPAPDAPSGDFFPPAPPTTTTPTSPGTTPSPTTVAADVSKTPSGSGSGHHGGGP 121

Query: 123 ----IKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPP 182
               I   G   + A+  LG   A   FL   R + R  S+ L+  +R+ + R  +    
Sbjct: 122 TKATIVAAGAGAAAAVALLGFACA---FLITGRARRRGDSQKLLGPDRAGAHR-SAATSA 181

Query: 183 SSFLNFGTMERRPCSIIERKGGKGED-QSSPHRPVDSVNKL-------DSHLLSPELQPL 242
           + FL  GT+E  P +     G    D   SP+R + S           D+   SPEL+PL
Sbjct: 182 ADFLYVGTVE--PTTPARHHGPTTADLVGSPYRKLRSERARRGVSRDEDADHPSPELRPL 241

Query: 243 PPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSKRESRSHSLNVQAK 274
           PPL +   +            S E  ++TP   +  S GGG        S S        
Sbjct: 242 PPLRRAATLG----------SSDEDGYYTPRQLSGGSGGGGAAEAWSSASASSPPTTTTA 301

BLAST of Clc01G17490 vs. ExPASy TrEMBL
Match: A0A0A0KIH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495090 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.0e-115
Identity = 237/287 (82.58%), Postives = 247/287 (86.06%), Query Frame = 0

Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPS------PPPPLGSA 60
           MK SFLIF LSLD  V+LNH RVN +S RRSLHQPLDP TFSSPPS      PPPPL SA
Sbjct: 1   MKISFLIFILSLDFFVVLNHLRVNGDSWRRSLHQPLDPATFSSPPSPPPPPPPPPPLESA 60

Query: 61  DSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120
            S+QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR
Sbjct: 61  HSDQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR 120

Query: 121 CKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSV 180
            KSRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI+ERKGGKGED SSP R VDSV
Sbjct: 121 YKSRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIVERKGGKGEDGSSPDRRVDSV 180

Query: 181 NKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPK 240
            KLD HLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG    
Sbjct: 181 KKLDFHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG---- 240

Query: 241 SKRESRSHSLNVQAK-GTSPLPYLEDSSIKQD----AASTPPHPTTT 277
            KRESR++SL+V+ K GTSPLPYLEDS IKQD    AAS PPHPTTT
Sbjct: 241 -KRESRNNSLSVKPKEGTSPLPYLEDSLIKQDHRRPAASPPPHPTTT 282

BLAST of Clc01G17490 vs. ExPASy TrEMBL
Match: A0A5A7SYW9 (Formin-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004100 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.6e-115
Identity = 236/284 (83.10%), Postives = 246/284 (86.62%), Query Frame = 0

Query: 1   MKPSFLIFFLSLDLLVLLNHPRVNANSQRRSLHQPLDPTTFSSPPS----PPPPLGSADS 60
           MK SFLIF LSLD LV+LNH RVNA+S RRSLHQPLDP TFSSPPS    PPPPL SA S
Sbjct: 1   MKISFLIFILSLDSLVVLNHLRVNADSWRRSLHQPLDPATFSSPPSPPPPPPPPLESAHS 60

Query: 61  NQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCK 120
           +QPTPAPSNVSLPNLPSS QQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYR K
Sbjct: 61  DQPTPAPSNVSLPNLPSSGQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRYK 120

Query: 121 SRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGEDQSSPHRPVDSVNK 180
           SRMLVEKERSLSFR DSGIPPSSFLN+GTMERRP SI ERKG KGED+SSP R VDSV K
Sbjct: 121 SRMLVEKERSLSFRHDSGIPPSSFLNYGTMERRPGSIDERKGRKGEDESSPDRRVDSVKK 180

Query: 181 LDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSAAVSYGGGVFPKSK 240
           LDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEW+AAV Y GG     K
Sbjct: 181 LDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWAAAVPYSGG-----K 240

Query: 241 RESRSHSLNVQAKGTSPLPYLEDSSIKQD----AASTPPHPTTT 277
           RESR++ L+V+ KGTSPLPYLE S IKQD    AAS PPHPT T
Sbjct: 241 RESRNNLLSVEPKGTSPLPYLEGSLIKQDHRRPAASPPPHPTAT 279

BLAST of Clc01G17490 vs. ExPASy TrEMBL
Match: A0A6J1G6X4 (Formin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451385 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-34
Identity = 123/307 (40.07%), Postives = 157/307 (51.14%), Query Frame = 0

Query: 4   SFLIFFLSLDLLVLLNHP--RVNANSQRRSLHQPLDPTTFSSPP----SPPPPLGS---- 63
           SF IF LSL    +   P  R +A S RR LHQPL P     PP    +PPPP  S    
Sbjct: 7   SFFIFSLSLFTSFIGAFPLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPDSPSDV 66

Query: 64  ----------ADSNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALA 123
                      D  QP P  +N ++P +P++T Q  KP KT+ I  SV IVTLGMLSALA
Sbjct: 67  PPFFHDPPTTQDQTQPPPPSTNGTMP-IPAATAQQSKPTKTVAIAISVGIVTLGMLSALA 126

Query: 124 FFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGED 183
           FFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S++E+ G  G +
Sbjct: 127 FFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGAN 186

Query: 184 QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWSA 243
            SSP+R ++S+   D +  SPELQPLPPL +  +         SDDES+ T FHTP+ S+
Sbjct: 187 -SSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQCSS 246

Query: 244 AVSYGGGVFPKSKRESRS-----------HSLNVQA------KGTSPLPYLEDSSIKQDA 274
            VS+  G F  + R S S             +N  A      K TSP      SS K++ 
Sbjct: 247 IVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNAPPIPHSKRTSPKSRFSVSSTKRNT 306

BLAST of Clc01G17490 vs. ExPASy TrEMBL
Match: A0A6J1D705 (Formin-like protein OS=Momordica charantia OX=3673 GN=LOC111017931 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34
Identity = 122/310 (39.35%), Postives = 163/310 (52.58%), Query Frame = 0

Query: 4   SFLIFFLSL-DLLVLLNHPRVNANS--QRRSLHQPL----DPTTFSSPPSPPPPLGSAD- 63
           +F I FLSL D L +   P ++ ++   RR LHQP      P     PP PPPP   +D 
Sbjct: 10  TFFILFLSLFDTLTIRGLPVLHDSAIVSRRILHQPFFPSEPPPVTDFPPPPPPPYSPSDD 69

Query: 64  -------------SNQPTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSAL 123
                        S+QP P+ SN ++P +P++TQ S KP KT+ I  SV IVTLGMLSAL
Sbjct: 70  QPFFHESPPSPDQSSQPPPSGSNGTMP-IPAATQPS-KPTKTVAIAISVGIVTLGMLSAL 129

Query: 124 AFFLYRQRIKYRCKSRMLVEKERSLSFRPDSGIPPSSFLNFGTMERRPCSIIERKGGKGE 183
           AFFLYR R K+  +S+ LV       F  DS  PPSSF   GT+E    S++E+ G  G 
Sbjct: 130 AFFLYRHRAKHPGESQKLVGGNNPERFAEDSRAPPSSFFYIGTVEPSQSSLVEQSGANGA 189

Query: 184 DQSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVNPSFETPLSDDESRETVFHTPEWS 243
           + SSP+R ++S+ + D +  SPELQPLPPL +   V        SD+ES +T FHTP+ S
Sbjct: 190 N-SSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPAVMSPPALSSSDEESHDTAFHTPQCS 249

Query: 244 AAVSYGGGVF-PKSKRESRSHSLNV------------------QAKGTSPLPYLEDSSIK 274
           + VS   G F P S+R +   S +                    +K TSP      SS K
Sbjct: 250 SVVSNDDGYFSPGSRRSNSVQSCSTASFKNVHMNSNSNPPPIPHSKRTSPKSRFSVSSTK 309

BLAST of Clc01G17490 vs. ExPASy TrEMBL
Match: W9RIZ3 (Formin-like protein OS=Morus notabilis OX=981085 GN=L484_009403 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-34
Identity = 121/303 (39.93%), Postives = 161/303 (53.14%), Query Frame = 0

Query: 5   FLIFFLSLDLLVLL---NHPRVNANSQRRSLHQPLDP-------------TTFSSPPSPP 64
           + +FFL L  LVL    +   V+  S RR LHQPL P              + SSPP PP
Sbjct: 6   YFVFFLILPQLVLTLTKSFAIVDNLSHRRILHQPLFPASSAPPPGTDDSTVSSSSPPPPP 65

Query: 65  PPLGSADS-----------NQPTPAPSNVSL-PNLPS-------STQQSFKPIKTLGIVC 124
           PP   A S           N PTP  S  S  PN PS       +  Q  KPIK + I  
Sbjct: 66  PPSPDAYSTPDQPFFHEIPNGPTPDQSQQSTPPNSPSNGTVAIPTATQPPKPIKKVAIAI 125

Query: 125 SVAIVTLGMLSALAFFLYRQRIKYRCKSRMLVE-------KERSLSFRPDSGIPPSSFLN 184
           SV IVTLGMLSALAFFLYR R+K+  +++ LV        ++ S SF  DS +PPSSF+ 
Sbjct: 126 SVGIVTLGMLSALAFFLYRHRVKHPSETQKLVAGGGGGGGRDNSQSFTEDSRVPPSSFIY 185

Query: 185 FGTMERRPCSIIERKGGKGED---QSSPHRPVDSVNKLDSHLLSPELQPLPPLSQNQIVN 244
            GTME    S+ E  GG   +     SP+R ++S+ + D +  SPELQPLPPL++   +N
Sbjct: 186 IGTMEPSRTSLSEANGGHSRELAPNKSPYRKLNSIKRSDRYRPSPELQPLPPLAKPPSMN 245

Query: 245 PSFETPLSDDESRETVFHTPEWSAAVSYGGGVF--PKSKRESRSHSLNVQAKGTSPLPYL 261
                  SD+ESRET FH+P+ S +VSY    +  P S++  +S++ N   K + P+P +
Sbjct: 246 SPSAMDSSDEESRETAFHSPQCS-SVSYDDSYYYTPVSRQSGKSNNGNASVKSSIPMPSV 305

BLAST of Clc01G17490 vs. TAIR 10
Match: AT5G67470.1 (formin homolog 6 )

HSP 1 Score: 119.0 bits (297), Expect = 6.0e-27
Identity = 107/271 (39.48%), Postives = 138/271 (50.92%), Query Frame = 0

Query: 23  VNANSQRRSLHQPLDPTTFSSPP-----SPPPPLGSADSN-------------------Q 82
           V++ + RR LHQPL P + + PP     +P PPL                          
Sbjct: 22  VSSEAHRRILHQPLFPESSTPPPPDFQSTPSPPLPDTPDQPFFPENPSTPQQTLFPPPPP 81

Query: 83  PTPAPSNVSLPNLPSSTQQSFKPIKTLGIVCSVAIVTLGMLSALAFFLYRQRIKYRCKSR 142
           P  A  N  LP +P++T QS KP K + IV SV IVTLGMLSALAFFLYR + K+   ++
Sbjct: 82  PVSADVNGGLP-IPTATTQSAKPGKKVAIVISVGIVTLGMLSALAFFLYRHKAKHASDTQ 141

Query: 143 MLV----EKERSLSFRPDSGIP---PSSFLNFGTMERRPCSIIERKGG-KGEDQSSPHRP 202
            LV    +   S  F+ DSG P    S+FL  GT+E    S  E  GG  G   SSP+R 
Sbjct: 142 KLVTGGGDGGGSRRFQEDSGPPTTTSSTFLYMGTVEPTRVSASESNGGTNGPVNSSPYRK 201

Query: 203 VDSVNKLDSHLLSPELQPLPPLS---QNQIVNPSFETPLSD---DESRETVFHTPEWSAA 254
           ++S  + + +  SPELQPLPPL+   Q    +PS  +P S    +E R+T F+TP  SA 
Sbjct: 202 LNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSALSPSSSSSGEECRDTAFYTPHGSAI 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0036422.15.5e-11583.10Formin-like protein 6 [Cucumis melo var. makuwa] >TYK12818.1 Formin-like protein... [more]
KAG6594983.16.5e-10074.91Formin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia][more]
KAE8647520.11.2e-7283.70hypothetical protein Csa_003054 [Cucumis sativus][more]
XP_023532921.17.3e-3539.94formin-like protein 6 [Cucurbita pepo subsp. pepo][more]
KAG7035193.12.1e-3440.07Formin-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
Q9FJX68.4e-2639.48Formin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=FH6 PE=2 SV=1[more]
Q10Q992.4e-0426.46Formin-like protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=FH8 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KIH82.0e-11582.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495090 PE=4 SV=1[more]
A0A5A7SYW92.6e-11583.10Formin-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25... [more]
A0A6J1G6X41.0e-3440.07Formin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451385 PE=3 SV=1[more]
A0A6J1D7051.3e-3439.35Formin-like protein OS=Momordica charantia OX=3673 GN=LOC111017931 PE=3 SV=1[more]
W9RIZ33.9e-3439.93Formin-like protein OS=Morus notabilis OX=981085 GN=L484_009403 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G67470.16.0e-2739.48formin homolog 6 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..175
NoneNo IPR availablePANTHERPTHR23213:SF338FORMIN-LIKE PROTEIN 6coord: 13..262
NoneNo IPR availablePANTHERPTHR23213FORMIN-RELATEDcoord: 13..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G17490.1Clc01G17490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane