Clc01G17280 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G17280
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	nuclear transcription factor Y subunit alpha-like
Location	ClcChr01: 30009401 .. 30010912 (-)
RNA-Seq Expression	Clc01G17280
Synteny	Clc01G17280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTAGTGCTTCCAAATGCTGCCCCTTTATATACTCTGTTTCCCTCTGCCTTCACATTCCATCTCTCTCATTCTGTTTTTGGTTTCTCTTGTTATTTAACGAAACCAAATTCACTGTGCTGTTTCTCAGAATTTAACCATAAATCTTTCTCTGTTTCTCTCACTCGCTCTCTGCAGCTTAGACTTGAAAATGGGGAGAAGCTTCGCCAGTGAAAGATGGGGTGAAGATGGATTTTACATGGAAGAACCCGATGAAGAAGATGAAACTTTATCCTTATGCGATCTTCCCATAAATCTAGTCAACGACGACAATCCACATTTTCTCTTAGAAATAAAACCCAGAGCCGGCGAGACTCCCATTGCCACCGCTGACGACGAATTTGATTTCGGTTCTTTAGGGGGTTTCAGTAATTCCGCCGCTCAGCCGCCGCCGGAAATGTGTTTGGCCGACGAGGTCTTCTACCAGGGCCAACTTTTGCCCGTTCGCCTCTCTGTTAGCTCCGACAATACCTACGCCGGATTCTACCGCCGGCACGGCTCCGGCTCCGGTTCGTTAGCGAACTTTAGAAGCATCAATAGCGGTGGAAGCGGAAGCAGTAGCAGTAGAAGTCAGTGTTCTTCCTCGAGCGTAACTAACAATTCCTTAACAACTACCTCCGCCGCTAGAAATACGCGGCTCACGGTCCCGAATTTATTCCACTCCCACCCGAGCCCTAAACCCCAAATTAAAGCTTCGCCGACCACATTTCGACAGGTGAGCACTGGCGGAGGCCGCCAAAGATCCTCCTCCACGTGGGATTTTTTCAGGCTAGGAGTAGTGAAAACGCCGGGAATGGAATTGCAGGACCTCAAACACCGGAGCAGCACGAGGAGGAACTCCTCCGTCAGCCGAAGCAACAGCGGGAAGGCCTTTATTCCGGCCGGCGCCATCGCCGCAAGCAACGAGAGCAGCGTGAAGGAGATGATGAGGAGACCTCGAGCGAGTGTATCCATAGAGAGGAAAAGCGGGGGAATTCTGAGTGGAGTTGGGTGTAAGTGTTCGGTGGAGTCGACGGTGGCGCCGGCGCCGAAGGCGGCGGTGGTGGTGAGGAGGAGAGAGGAAAACAGTAAGAATATTCCGGCGCAGGCGATGGCGAAAAGGGAGAATCCGATGAGTGAATTGAGGATGAAGAAGGTGGAAAAGGAAAAAGAGGAAGAGGAAAAGTTAGCATTGTCTCGTCATCGGACATTTGAATGGCTAAAGCAGCTCTCGCATGCAAGCTTTCCCTGTGAGGTTTAGACTTAGCGTTGGATACCTACAAGTACAACAATCCCACGCATGCTTCTAATACTTCATCTCTCTCTCTCTCTTCTCTTAAGAAAGATTTATTATTACGGGTTGGTTAATAATTCAAATGGGAAACTCCAACTTTGAGATTTGGTTGTTTTGGATGGTTATATATAATGTTTTAGTTTATCTTGTTCGATAATTTAGACTTTAACTTTCGAAAAGATCATGAATATTTCGCGTT

mRNA sequence

CTTTTTAGTGCTTCCAAATGCTGCCCCTTTATATACTCTGTTTCCCTCTGCCTTCACATTCCATCTCTCTCATTCTGTTTTTGGTTTCTCTTGTTATTTAACGAAACCAAATTCACTGTGCTGTTTCTCAGAATTTAACCATAAATCTTTCTCTGTTTCTCTCACTCGCTCTCTGCAGCTTAGACTTGAAAATGGGGAGAAGCTTCGCCAGTGAAAGATGGGGTGAAGATGGATTTTACATGGAAGAACCCGATGAAGAAGATGAAACTTTATCCTTATGCGATCTTCCCATAAATCTAGTCAACGACGACAATCCACATTTTCTCTTAGAAATAAAACCCAGAGCCGGCGAGACTCCCATTGCCACCGCTGACGACGAATTTGATTTCGGTTCTTTAGGGGGTTTCAGTAATTCCGCCGCTCAGCCGCCGCCGGAAATGTGTTTGGCCGACGAGGTCTTCTACCAGGGCCAACTTTTGCCCGTTCGCCTCTCTGTTAGCTCCGACAATACCTACGCCGGATTCTACCGCCGGCACGGCTCCGGCTCCGGTTCGTTAGCGAACTTTAGAAGCATCAATAGCGGTGGAAGCGGAAGCAGTAGCAGTAGAAGTCAGTGTTCTTCCTCGAGCGTAACTAACAATTCCTTAACAACTACCTCCGCCGCTAGAAATACGCGGCTCACGGTCCCGAATTTATTCCACTCCCACCCGAGCCCTAAACCCCAAATTAAAGCTTCGCCGACCACATTTCGACAGGTGAGCACTGGCGGAGGCCGCCAAAGATCCTCCTCCACGTGGGATTTTTTCAGGCTAGGAGTAGTGAAAACGCCGGGAATGGAATTGCAGGACCTCAAACACCGGAGCAGCACGAGGAGGAACTCCTCCGTCAGCCGAAGCAACAGCGGGAAGGCCTTTATTCCGGCCGGCGCCATCGCCGCAAGCAACGAGAGCAGCGTGAAGGAGATGATGAGGAGACCTCGAGCGAGTGTATCCATAGAGAGGAAAAGCGGGGGAATTCTGAGTGGAGTTGGGTGTAAGTGTTCGGTGGAGTCGACGGTGGCGCCGGCGCCGAAGGCGGCGGTGGTGGTGAGGAGGAGAGAGGAAAACAGTAAGAATATTCCGGCGCAGGCGATGGCGAAAAGGGAGAATCCGATGAGTGAATTGAGGATGAAGAAGGTGGAAAAGGAAAAAGAGGAAGAGGAAAAGTTAGCATTGTCTCGTCATCGGACATTTGAATGGCTAAAGCAGCTCTCGCATGCAAGCTTTCCCTGTGAGGTTTAGACTTAGCGTTGGATACCTACAAGTACAACAATCCCACGCATGCTTCTAATACTTCATCTCTCTCTCTCTCTTCTCTTAAGAAAGATTTATTATTACGGGTTGGTTAATAATTCAAATGGGAAACTCCAACTTTGAGATTTGGTTGTTTTGGATGGTTATATATAATGTTTTAGTTTATCTTGTTCGATAATTTAGACTTTAACTTTCGAAAAGATCATGAATATTTCGCGTT

Coding sequence (CDS)

ATGGGGAGAAGCTTCGCCAGTGAAAGATGGGGTGAAGATGGATTTTACATGGAAGAACCCGATGAAGAAGATGAAACTTTATCCTTATGCGATCTTCCCATAAATCTAGTCAACGACGACAATCCACATTTTCTCTTAGAAATAAAACCCAGAGCCGGCGAGACTCCCATTGCCACCGCTGACGACGAATTTGATTTCGGTTCTTTAGGGGGTTTCAGTAATTCCGCCGCTCAGCCGCCGCCGGAAATGTGTTTGGCCGACGAGGTCTTCTACCAGGGCCAACTTTTGCCCGTTCGCCTCTCTGTTAGCTCCGACAATACCTACGCCGGATTCTACCGCCGGCACGGCTCCGGCTCCGGTTCGTTAGCGAACTTTAGAAGCATCAATAGCGGTGGAAGCGGAAGCAGTAGCAGTAGAAGTCAGTGTTCTTCCTCGAGCGTAACTAACAATTCCTTAACAACTACCTCCGCCGCTAGAAATACGCGGCTCACGGTCCCGAATTTATTCCACTCCCACCCGAGCCCTAAACCCCAAATTAAAGCTTCGCCGACCACATTTCGACAGGTGAGCACTGGCGGAGGCCGCCAAAGATCCTCCTCCACGTGGGATTTTTTCAGGCTAGGAGTAGTGAAAACGCCGGGAATGGAATTGCAGGACCTCAAACACCGGAGCAGCACGAGGAGGAACTCCTCCGTCAGCCGAAGCAACAGCGGGAAGGCCTTTATTCCGGCCGGCGCCATCGCCGCAAGCAACGAGAGCAGCGTGAAGGAGATGATGAGGAGACCTCGAGCGAGTGTATCCATAGAGAGGAAAAGCGGGGGAATTCTGAGTGGAGTTGGGTGTAAGTGTTCGGTGGAGTCGACGGTGGCGCCGGCGCCGAAGGCGGCGGTGGTGGTGAGGAGGAGAGAGGAAAACAGTAAGAATATTCCGGCGCAGGCGATGGCGAAAAGGGAGAATCCGATGAGTGAATTGAGGATGAAGAAGGTGGAAAAGGAAAAAGAGGAAGAGGAAAAGTTAGCATTGTCTCGTCATCGGACATTTGAATGGCTAAAGCAGCTCTCGCATGCAAGCTTTCCCTGTGAGGTTTAG

Protein sequence

MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATADDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSGSLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIKASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKAFIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVRRREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPCEV

Homology

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BLAST of Clc01G17280 vs. NCBI nr
Match: XP_038882249.1 (uncharacterized protein LOC120073475 [Benincasa hispida])

HSP 1 Score: 578.6 bits (1490), Expect = 3.9e-161
Identity = 313/361 (86.70%), Postives = 326/361 (90.30%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+A+ERW EDGFYM EPDEEDE+LSLCDLPINLV DDNPHFL EIKPRAGETP+A A
Sbjct: 1   MGRSYANERWREDGFYMAEPDEEDESLSLCDLPINLVKDDNPHFLSEIKPRAGETPVAAA 60

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DDEFDFG L  FSNSAAQP PEMCLADEVFYQGQLLPVRLSVSSDNT A FY RHGSGSG
Sbjct: 61  DDEFDFGFLRDFSNSAAQPLPEMCLADEVFYQGQLLPVRLSVSSDNTSARFYHRHGSGSG 120

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
           S ANFRSINS  S SSSSRSQCSSSS TNNSLTTTSAAR +RLTVPNLFHSHPSPKPQIK
Sbjct: 121 SFANFRSINS--SRSSSSRSQCSSSSATNNSLTTTSAARISRLTVPNLFHSHPSPKPQIK 180

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASPTTFRQ +TGGGRQ+SSS WDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA
Sbjct: 181 ASPTTFRQANTGGGRQKSSSPWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           FIPA AIAASNESSVKEM R+PRASVSIERK GGILSGVGCKCSV+STVAPAPK AVVVR
Sbjct: 241 FIPAAAIAASNESSVKEMTRKPRASVSIERKGGGILSGVGCKCSVDSTVAPAPK-AVVVR 300

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           RR+ N KNIPAQA       M ELR+KKVEKEKEEEEKLALSR RTFEWLK+LSHA+FPC
Sbjct: 301 RRKVNGKNIPAQA-------MRELRIKKVEKEKEEEEKLALSRQRTFEWLKELSHATFPC 351

Query: 361 E 362
           E
Sbjct: 361 E 351

[Close]

BLAST of Clc01G17280 vs. NCBI nr
Match: XP_011658482.1 (uncharacterized protein LOC105436026 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 3.3e-144
Identity = 293/362 (80.94%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ SER GED  YMEEPDE DE+LSLCDLPINLV D NPHFLLEIKPRAGET IA A
Sbjct: 1   MGRSYDSERCGEDKLYMEEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAA 60

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DDEFDFGSLGGFSN A QPPPEMCLADEVFYQGQLLPVRLSVSSDNT AG YRRH     
Sbjct: 61  DDEFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRH----- 120

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLT TSAARN +L VPNLFHSHPSPKPQIK
Sbjct: 121 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTITSAARNPQLRVPNLFHSHPSPKPQIK 180

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP TFRQ STGG RQ+SS  WDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 181 ASPMTFRQASTGGNRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 240

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA     SNE SVK MMR+PR SV IERKS GIL GVGCKCSVESTVAPAPKA V VR
Sbjct: 241 FVPA---PLSNERSVKVMMRKPRESVLIERKSRGILGGVGCKCSVESTVAPAPKAMVGVR 300

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  NSKNIPAQA AKR     E+RMKKV KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 301 RK-GNSKNIPAQATAKR-----EMRMKKVGKEKEEEEKLELSRHRTFEWLKELSHANFSC 342

Query: 361 EV 363
           EV
Sbjct: 361 EV 342

[Close]

BLAST of Clc01G17280 vs. NCBI nr
Match: KGN48582.1 (hypothetical protein Csa_004362 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 3.3e-144
Identity = 293/362 (80.94%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ SER GED  YMEEPDE DE+LSLCDLPINLV D NPHFLLEIKPRAGET IA A
Sbjct: 3   MGRSYDSERCGEDKLYMEEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAA 62

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DDEFDFGSLGGFSN A QPPPEMCLADEVFYQGQLLPVRLSVSSDNT AG YRRH     
Sbjct: 63  DDEFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRH----- 122

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLT TSAARN +L VPNLFHSHPSPKPQIK
Sbjct: 123 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTITSAARNPQLRVPNLFHSHPSPKPQIK 182

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP TFRQ STGG RQ+SS  WDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 183 ASPMTFRQASTGGNRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 242

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA     SNE SVK MMR+PR SV IERKS GIL GVGCKCSVESTVAPAPKA V VR
Sbjct: 243 FVPA---PLSNERSVKVMMRKPRESVLIERKSRGILGGVGCKCSVESTVAPAPKAMVGVR 302

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  NSKNIPAQA AKR     E+RMKKV KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 303 RK-GNSKNIPAQATAKR-----EMRMKKVGKEKEEEEKLELSRHRTFEWLKELSHANFSC 344

Query: 361 EV 363
           EV
Sbjct: 363 EV 344

[Close]

BLAST of Clc01G17280 vs. NCBI nr
Match: TYK12838.1 (putative membrane-associated kinase regulator 1 [Cucumis melo var. makuwa])

HSP 1 Score: 508.4 bits (1308), Expect = 4.9e-140
Identity = 286/362 (79.01%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ +E+  ED  YMEEPDE+DE+LSLCDLPINLV DDNPHFLLEIKPRAG+  IA A
Sbjct: 3   MGRSYDNEKC-EDELYMEEPDEKDESLSLCDLPINLVKDDNPHFLLEIKPRAGKASIAAA 62

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DD+FDFGSLGGFSN A QPPPEMCLADEVFYQGQLLP+RLSVSSDNT AG YRRH     
Sbjct: 63  DDDFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPLRLSVSSDNTSAGVYRRH----- 122

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLTTTSAAR+ RL VPNLFHSHPSPKPQIK
Sbjct: 123 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTTTSAARDPRLRVPNLFHSHPSPKPQIK 182

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP T RQ STGG RQ+SS TWDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 183 ASPITSRQASTGGNRQKSSFTWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 242

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA   A SNE SVK MMRRPR SV IERKS GILSGVGCKCSV STVAPAPKA VVVR
Sbjct: 243 FVPA---APSNERSVKVMMRRPRESVLIERKSSGILSGVGCKCSVGSTVAPAPKAMVVVR 302

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  N KNIPA+         SELRMKK+ KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 303 RK-GNGKNIPAK---------SELRMKKLGKEKEEEEKLELSRHRTFEWLKELSHANFSC 339

Query: 361 EV 363
           EV
Sbjct: 363 EV 339

[Close]

BLAST of Clc01G17280 vs. NCBI nr
Match: XP_008440345.2 (PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis melo])

HSP 1 Score: 508.4 bits (1308), Expect = 4.9e-140
Identity = 286/362 (79.01%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ +E+  ED  YMEEPDE+DE+LSLCDLPINLV DDNPHFLLEIKPRAG+  IA A
Sbjct: 1   MGRSYDNEKC-EDELYMEEPDEKDESLSLCDLPINLVKDDNPHFLLEIKPRAGKASIAAA 60

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DD+FDFGSLGGFSN A QPPPEMCLADEVFYQGQLLP+RLSVSSDNT AG YRRH     
Sbjct: 61  DDDFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPLRLSVSSDNTSAGVYRRH----- 120

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLTTTSAAR+ RL VPNLFHSHPSPKPQIK
Sbjct: 121 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTTTSAARDPRLRVPNLFHSHPSPKPQIK 180

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP T RQ STGG RQ+SS TWDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 181 ASPITSRQASTGGNRQKSSFTWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 240

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA   A SNE SVK MMRRPR SV IERKS GILSGVGCKCSV STVAPAPKA VVVR
Sbjct: 241 FVPA---APSNERSVKVMMRRPRESVLIERKSSGILSGVGCKCSVGSTVAPAPKAMVVVR 300

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  N KNIPA+         SELRMKK+ KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 301 RK-GNGKNIPAK---------SELRMKKLGKEKEEEEKLELSRHRTFEWLKELSHANFSC 337

Query: 361 EV 363
           EV
Sbjct: 361 EV 337

[Close]

BLAST of Clc01G17280 vs. ExPASy TrEMBL
Match: A0A0A0KJN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493900 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.6e-144
Identity = 293/362 (80.94%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ SER GED  YMEEPDE DE+LSLCDLPINLV D NPHFLLEIKPRAGET IA A
Sbjct: 3   MGRSYDSERCGEDKLYMEEPDENDESLSLCDLPINLVKDGNPHFLLEIKPRAGETSIAAA 62

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DDEFDFGSLGGFSN A QPPPEMCLADEVFYQGQLLPVRLSVSSDNT AG YRRH     
Sbjct: 63  DDEFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPVRLSVSSDNTSAGVYRRH----- 122

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLT TSAARN +L VPNLFHSHPSPKPQIK
Sbjct: 123 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTITSAARNPQLRVPNLFHSHPSPKPQIK 182

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP TFRQ STGG RQ+SS  WDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 183 ASPMTFRQASTGGNRQKSSFGWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 242

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA     SNE SVK MMR+PR SV IERKS GIL GVGCKCSVESTVAPAPKA V VR
Sbjct: 243 FVPA---PLSNERSVKVMMRKPRESVLIERKSRGILGGVGCKCSVESTVAPAPKAMVGVR 302

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  NSKNIPAQA AKR     E+RMKKV KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 303 RK-GNSKNIPAQATAKR-----EMRMKKVGKEKEEEEKLELSRHRTFEWLKELSHANFSC 344

Query: 361 EV 363
           EV
Sbjct: 363 EV 344

[Close]

BLAST of Clc01G17280 vs. ExPASy TrEMBL
Match: A0A5D3CNV0 (Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004300 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.4e-140
Identity = 286/362 (79.01%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ +E+  ED  YMEEPDE+DE+LSLCDLPINLV DDNPHFLLEIKPRAG+  IA A
Sbjct: 3   MGRSYDNEKC-EDELYMEEPDEKDESLSLCDLPINLVKDDNPHFLLEIKPRAGKASIAAA 62

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DD+FDFGSLGGFSN A QPPPEMCLADEVFYQGQLLP+RLSVSSDNT AG YRRH     
Sbjct: 63  DDDFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPLRLSVSSDNTSAGVYRRH----- 122

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLTTTSAAR+ RL VPNLFHSHPSPKPQIK
Sbjct: 123 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTTTSAARDPRLRVPNLFHSHPSPKPQIK 182

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP T RQ STGG RQ+SS TWDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 183 ASPITSRQASTGGNRQKSSFTWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 242

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA   A SNE SVK MMRRPR SV IERKS GILSGVGCKCSV STVAPAPKA VVVR
Sbjct: 243 FVPA---APSNERSVKVMMRRPRESVLIERKSSGILSGVGCKCSVGSTVAPAPKAMVVVR 302

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  N KNIPA+         SELRMKK+ KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 303 RK-GNGKNIPAK---------SELRMKKLGKEKEEEEKLELSRHRTFEWLKELSHANFSC 339

Query: 361 EV 363
           EV
Sbjct: 363 EV 339

[Close]

BLAST of Clc01G17280 vs. ExPASy TrEMBL
Match: A0A1S3B0H1 (probable membrane-associated kinase regulator 1 OS=Cucumis melo OX=3656 GN=LOC103484825 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.4e-140
Identity = 286/362 (79.01%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+ +E+  ED  YMEEPDE+DE+LSLCDLPINLV DDNPHFLLEIKPRAG+  IA A
Sbjct: 1   MGRSYDNEKC-EDELYMEEPDEKDESLSLCDLPINLVKDDNPHFLLEIKPRAGKASIAAA 60

Query: 61  DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGSG 120
           DD+FDFGSLGGFSN A QPPPEMCLADEVFYQGQLLP+RLSVSSDNT AG YRRH     
Sbjct: 61  DDDFDFGSLGGFSNLADQPPPEMCLADEVFYQGQLLPLRLSVSSDNTSAGVYRRH----- 120

Query: 121 SLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQIK 180
                RSINS  SGSSSSRSQCSSSSVTNNSLTTTSAAR+ RL VPNLFHSHPSPKPQIK
Sbjct: 121 ----LRSINS--SGSSSSRSQCSSSSVTNNSLTTTSAARDPRLRVPNLFHSHPSPKPQIK 180

Query: 181 ASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGKA 240
           ASP T RQ STGG RQ+SS TWDFFRLGVVKTPGMEL+DLKHRSSTRRNSSVSRSNS KA
Sbjct: 181 ASPITSRQASTGGNRQKSSFTWDFFRLGVVKTPGMELEDLKHRSSTRRNSSVSRSNSEKA 240

Query: 241 FIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVVR 300
           F+PA   A SNE SVK MMRRPR SV IERKS GILSGVGCKCSV STVAPAPKA VVVR
Sbjct: 241 FVPA---APSNERSVKVMMRRPRESVLIERKSSGILSGVGCKCSVGSTVAPAPKAMVVVR 300

Query: 301 RREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFPC 360
           R+  N KNIPA+         SELRMKK+ KEKEEEEKL LSRHRTFEWLK+LSHA+F C
Sbjct: 301 RK-GNGKNIPAK---------SELRMKKLGKEKEEEEKLELSRHRTFEWLKELSHANFSC 337

Query: 361 EV 363
           EV
Sbjct: 361 EV 337

[Close]

BLAST of Clc01G17280 vs. ExPASy TrEMBL
Match: A0A6J1GEW9 (uncharacterized protein LOC111453545 OS=Cucurbita moschata OX=3662 GN=LOC111453545 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.2e-133
Identity = 272/360 (75.56%), Postives = 291/360 (80.83%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+A+E WGED FYME+ D EDETLSLCDLPI++V  D PHFL E KP AGE PIA A
Sbjct: 1   MGRSYANEGWGEDEFYMEQLDHEDETLSLCDLPIHVVKADKPHFLFEEKPGAGEKPIAAA 60

Query: 61  -DDEFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSGS 120
            DDEFDFGSLGGFSNS+AQPPP+MCLADEVFYQG+LLPVRLSVSSD T  GF+RR GSG 
Sbjct: 61  DDDEFDFGSLGGFSNSSAQPPPQMCLADEVFYQGKLLPVRLSVSSDTTSTGFHRRQGSGY 120

Query: 121 GSLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQI 180
           GS  N RSINS  SGSSSSRSQCSSSSVT  S+T+TSA RN+   VPNLFHSHPSPKPQI
Sbjct: 121 GSFGNVRSINS--SGSSSSRSQCSSSSVTTTSITSTSAVRNSLPRVPNLFHSHPSPKPQI 180

Query: 181 KASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSGK 240
           KASP TFRQ STGGGRQ SSS WDFFRLGVVK PGMELQDLKHRSSTRRNSSVSRS+S K
Sbjct: 181 KASPITFRQASTGGGRQISSSKWDFFRLGVVKAPGMELQDLKHRSSTRRNSSVSRSDSEK 240

Query: 241 AFIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVVV 300
           AFIP    AASN +SVKE+MRRPRASVSIERK GGILSGVGCKCSV STV PAPK  VVV
Sbjct: 241 AFIP----AASNGNSVKEIMRRPRASVSIERKRGGILSGVGCKCSVGSTVTPAPK-TVVV 300

Query: 301 RRREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASFP 360
           RRR+ N K  P                   +KEKEE+EKLALSR RTFEWLK+LSHASFP
Sbjct: 301 RRRKGNRKKTP-------------------KKEKEEQEKLALSRDRTFEWLKELSHASFP 334

[Close]

BLAST of Clc01G17280 vs. ExPASy TrEMBL
Match: A0A6J1IVT1 (uncharacterized protein LOC111478847 OS=Cucurbita maxima OX=3661 GN=LOC111478847 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.4e-132
Identity = 271/361 (75.07%), Postives = 291/361 (80.61%), Query Frame = 0


Query: 1   MGRSFASERWGEDGFYMEEPDEEDETLSLCDLPINLVNDDNPHFLLEIKPRAGETPIATA 60
           MGRS+A+E WGED FYME+ D EDETLSLCDLPI++V D+ PHFL E KP AGE PIA  
Sbjct: 1   MGRSYANEGWGEDEFYMEQLDHEDETLSLCDLPIHVVKDNKPHFLFEEKPGAGENPIAAV 60

Query: 61  DD--EFDFGSLGGFSNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSG 120
           DD  EFDFGSLGGFSNS+AQPPP+MCLADEVF+QG+LLPVRLSVSSD T  GF+RR GSG
Sbjct: 61  DDDEEFDFGSLGGFSNSSAQPPPQMCLADEVFHQGKLLPVRLSVSSDTTSTGFHRRQGSG 120

Query: 121 SGSLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLFHSHPSPKPQ 180
            GS  N RSINS  SGSSSSRSQCSSSSVT  S+T+TSA RN+   VPNLFHSHPSPKPQ
Sbjct: 121 YGSFGNVRSINS--SGSSSSRSQCSSSSVTTTSITSTSAVRNSLPRVPNLFHSHPSPKPQ 180

Query: 181 IKASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDLKHRSSTRRNSSVSRSNSG 240
           IKASP TFRQ STGGGRQ S S WDFFRLGVVK PGMELQDLKHRSSTRRNSSVSRS+S 
Sbjct: 181 IKASPITFRQASTGGGRQISPSKWDFFRLGVVKAPGMELQDLKHRSSTRRNSSVSRSDSE 240

Query: 241 KAFIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKAAVV 300
           KAFIP    AASN +SVKE+MRRPRASVSIERK GGILSGVGCKCSV STV PAPK  V 
Sbjct: 241 KAFIP----AASNGNSVKEIMRRPRASVSIERKRGGILSGVGCKCSVGSTVTPAPK-TVE 300

Query: 301 VRRREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQLSHASF 360
           VRRR+ NSKN P                   EKEKEE+EKLALSR RTFEWLK+LSHASF
Sbjct: 301 VRRRKGNSKNTP-------------------EKEKEEQEKLALSRDRTFEWLKELSHASF 335

[Close]

BLAST of Clc01G17280 vs. TAIR 10
Match: AT5G67350.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 107/358 (29.89%), Postives = 157/358 (43.85%), Query Frame = 0


Query: 7   SERWGEDGFYMEEPDEEDETLSLCDLP------INLVNDDNPHFLLEIKPRAGETPIATA 66
           S R+ ED   +EE +EE+E LSLCDLP       ++V +++  F                
Sbjct: 16  SHRYQEDDDDVEE-EEEEEALSLCDLPNEKGELRSIVKEEDEEF---------------- 75

Query: 67  DDEFDFGSLGGF--SNSAAQPPPEMCLADEVFYQGQLLPVRLSVSSDNTYAGFYRRHGSG 126
           D  F+FG    F   + + +P PEM  ADE+F++G++LP+R SVS D   AG        
Sbjct: 76  DSGFEFGIGSSFRAGSDSCEPAPEMSTADELFFKGRILPLRHSVSLD---AGL------- 135

Query: 127 SGSLANFRSINSGGSGSSSSRSQCSSSSVTNNSLTTTSAARNTRLTVPNLF-HSHPSPKP 186
                           +  +R    S SV       T   R+ R    N   +S PSP+P
Sbjct: 136 ----------------NEPTRLITRSESV---EFRRTGIIRSDRKIKNNFIDYSQPSPQP 195

Query: 187 QIKASPTTFRQVSTGGGRQRSSSTWDFFRLGVVKTPGMELQDL--KHRSSTRRNSSVSRS 246
           QI+ S +   +V++     +SSS WDF RLG+V+TP +EL+      + S  RNSS S +
Sbjct: 196 QIRRSSSMTARVNS-IRNPKSSSIWDFLRLGLVRTPEIELRTTAGNAKLSVSRNSSCSST 255

Query: 247 NSGKAFIPAGAIAASNESSVKEMMRRPRASVSIERKSGGILSGVGCKCSVESTVAPAPKA 306
           ++           +SN   +     R R      R+   + S   CKCSV +    AP  
Sbjct: 256 ST-----------SSNSKKIGSGESRSR-----NRRRSFMFS--DCKCSVSTETKMAPVK 290

Query: 307 AVVVRRREENSKNIPAQAMAKRENPMSELRMKKVEKEKEEEEKLALSRHRTFEWLKQL 354
             V     E  + +  +  AK+                  EEK A++R RTFEWL Q+
Sbjct: 316 IKVSSGETEEKQRMMEKKTAKK------------------EEKSAMARKRTFEWLSQV 290

The following BLAST results are available for this feature:

BLAST of Clc01G17280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882249.1	3.9e-161	86.70	uncharacterized protein LOC120073475 [Benincasa hispida]	[more]
XP_011658482.1	3.3e-144	80.94	uncharacterized protein LOC105436026 [Cucumis sativus]	[more]
KGN48582.1	3.3e-144	80.94	hypothetical protein Csa_004362 [Cucumis sativus]	[more]
TYK12838.1	4.9e-140	79.01	putative membrane-associated kinase regulator 1 [Cucumis melo var. makuwa]	[more]
XP_008440345.2	4.9e-140	79.01	PREDICTED: probable membrane-associated kinase regulator 1 [Cucumis melo]	[more]

BLAST of Clc01G17280 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G17280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJN1	1.6e-144	80.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G493900 PE=4 SV=1	[more]
A0A5D3CNV0	2.4e-140	79.01	Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B0H1	2.4e-140	79.01	probable membrane-associated kinase regulator 1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GEW9	8.2e-133	75.56	uncharacterized protein LOC111453545 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]
A0A6J1IVT1	1.4e-132	75.07	uncharacterized protein LOC111478847 OS=Cucurbita maxima OX=3661 GN=LOC111478847...	[more]

BLAST of Clc01G17280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67350.1	1.1e-17	29.89	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..238
None	No IPR available	PANTHER	PTHR33922:SF2	OS01G0888066 PROTEIN	coord: 16..358
None	No IPR available	PANTHER	PTHR33922	OS01G0888066 PROTEIN-RELATED	coord: 16..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G17280.1	Clc01G17280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity