Clc01G15570 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTGAGTTTTAATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAGCGATGGCGATGGATCAACCCGCACCAGCATAATCCTATGGTTAAAGTACTATCACTACCCTTTGTTATGTTTTGAAATTTTTTAACTCATTGAATTATGTTCGTGTGGAAAATTATAAACTATATATATATATATATATTGTTAATTTTGAATATGAAAGCTTGGAAATTAGTGGTAGAATTGTACATTTTGCCTTCCTGCTTCTTCCTATGCAATGTCATTGGAAGTCGAAAAGAGATGAAAATTATAGTGAATGAATTTAAACTTTATGCTTTTTATTTCAATTATCAATCTTTGCATTTCATTCTTGCCTATTTAATAT TTTTTTTTTGAGTTTTAATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAGCGATGGCGATGGATCAACCCGCACCAGCATAATCCTATGGTTAAAGTACTATCACTACCCTTTGTTATGTTTTGAAATTTTTTAACTCATTGAATTATGTTCGTGTGGAAAATTATAAACTATATATATATATATATATTGTTAATTTTGAATATGAAAGCTTGGAAATTAGTGGTAGAATTGTACATTTTGCCTTCCTGCTTCTTCCTATGCAATGTCATTGGAAGTCGAAAAGAGATGAAAATTATAGTGAATGAATTTAAACTTTATGCTTTTTATTTCAATTATCAATCTTTGCATTTCATTCTTGCCTATTTAATAT ATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAG MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPININGRFSANTIVGCWTRRWWQ Homology
BLAST of Clc01G15570 vs. NCBI nr
Match: KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 168.3 bits (425), Expect = 4.6e-38 Identity = 104/136 (76.47%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Clc01G15570 vs. NCBI nr
Match: XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus]) HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36 Identity = 104/137 (75.91%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of Clc01G15570 vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia]) HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30 Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 0
BLAST of Clc01G15570 vs. NCBI nr
Match: KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135.6 bits (340), Expect = 3.3e-28 Identity = 88/133 (66.17%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of Clc01G15570 vs. NCBI nr
Match: KGN48398.1 (hypothetical protein Csa_004350 [Cucumis sativus]) HSP 1 Score: 135.2 bits (339), Expect = 4.3e-28 Identity = 88/115 (76.52%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Clc01G15570 vs. ExPASy TrEMBL
Match: A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38 Identity = 104/136 (76.47%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Clc01G15570 vs. ExPASy TrEMBL
Match: A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 7.7e-31 Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 0
BLAST of Clc01G15570 vs. ExPASy TrEMBL
Match: A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.1e-28 Identity = 88/115 (76.52%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Clc01G15570 vs. ExPASy TrEMBL
Match: A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 2.0e-23 Identity = 81/127 (63.78%), Postives = 91/127 (71.65%), Query Frame = 0
BLAST of Clc01G15570 vs. ExPASy TrEMBL
Match: A0A6J5V3C5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38002 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09 Identity = 51/109 (46.79%), Postives = 68/109 (62.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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