Clc01G14580 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G14580
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CDT1-like protein a
Location	ClcChr01: 27383787 .. 27388798 (+)
RNA-Seq Expression	Clc01G14580
Synteny	Clc01G14580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGGTCAAAAAACATTGAGAAAATATATATATATATATGGAAAAATGGGGCACAGGAATCAAAGGCAAAATTTCCCTCGTATCGGTAATTCACTACTTTCCTCGGCAGCTCCATATATTGTTTTTGTTGCTGTTAATCAAGGTATTTCTTGTTCTTGCAATGTTCTTCCCCTTCAATTGGTTCTTGTAATGTTTCTTCATTTTACCCTTAGTTAATCACAGTAAGGAATATTGTTGTTATTTATTCTCCCTTACGTGCCATTGGTAATTGGGGGTTTCAAATTAATCTATTATTAATTTGTTACTTTAGTTGCTAGGAAATTCTTTGACAGTCCACATTAATGAGGAATTGAGCAAAATGCTCTTTGAAGACGTTTTCTTTCTAATCCTTGTGTGGTGGTTCCATGGTCTGTAGTGAATTTGAGATTAAAGTTCTGTTTCTTTGTAGGAGGCCACTTGTTGAGTTATTCTAGAATGGGTGAAAAAACATTTGAAGATGGTGGCCAAAATGTTTCAGGCATTGAAACCAATCCTTCTATTGACAAACCAATTGAAGGAATTTATGGTAAACAGAATTCAGACAGTAACATTGCATGTGTGACACCAGAGAAAGCAGATGAGTATTTGAAAGGAAAATTGAAAGAAGAAGGGATCAAACTTCAAGAAAAGTGGGTATATTTACTCGATGCAATGTCTAACACAAGCTTTGTAGTACTTATTTCATTGTGCTTATGCCGTGTTATAGTTATTAAACTTTAGATTACGAATTATTTAGCCCTTATTATTTTTCGAAGAGATAAATATATTTAGAATTAGTAGTACTCTATGTTTTTAGAAAGCCCTTCTAGGCGCGCGCTTAGGCGTAGCCTCCTTAAAAAGGTGCTGCTCACAAAAACAAGGTGCGCATTAGGTGCATGCCATTTGTGAAGCTCCAAGGCTGAAAGACAATTCTGCCTTAACCCCACACCTTATTTTAGCCTTGCACTTAAGTCTCTGTTGAGCACGTAGCTTCAAACACTTCCCATATTAATATCCAAACATGTTCATGTTAGGTTTTTGTTGAATAATTTACTTATAACTACAATGATTTTTTATGAGAAGTTTATGGATAACATAATGCAAAATAAAATCATCTTGAACATTTATGGAAGAAAATAAGATTTATAACAACATTTTGTCACTATAAATTTGAACTTGACTTGATCTCAATTTGATTATATGCAGATGCCAATCAATTGTAGAGTTCTTTACTTGCTTGACTTCCTCTATGAGGCTGCTTAGAATGAGAAAAAAGTTGTCTACCTTTCACAATGTATCCTGCCAGGTGTCGGTTATGACAAAAAGGTATATCATAGCATTTGTTTTTTAATTCTATTTAACCTTTATGATTTTTTTTTCCTATTATTTTTTCTTTTCTTAACCAATGACAAGTGTAGATAAACGAAATGGTTAGGTTAACACATAATATATTGAACATGTGACATAGTCGGCTACTTTTATTAAATATAATGATACCATTTTCCCTAAGGGTGCAAGTCATTATTGGAAAAAGTTGAGAAAATCTACTGAATTAAGAGCAGCATGTTTGAGAGTAATGTTTGGGATAATTTTGTCATGTTTAAAATCATTCCCAAACATGTATTTAATCACTCAAAACCAATTTAGATCAGATGAAAATCATATTTAAAAGTGTAAAATCAAACATTAAATTGATTTTGAATGATCAATGACATGTTTGAGAGTGATTTTGAAATGGTTAAGTGACTTTTCCAAATATGTCCTAAATTAATATGTTTCAAGTGGATTCAATTTGTTTCGATCAATTCAATTTTGGTTGGTTTAGATTGGTTCGATCAAGATGGTTGATTTGGTTTTCAAGAAAAATGGTTTTGACATAATTTTTATTTTATTATCATTATTATTTTTTTGCCACAAAACCAACTCATAGTTCAACTCAGTCGAATATTACAGAAGTTTGATAACTAAAATTTGTATTGTTTGTTCTTTTTCTTTTTTTAGAAAGTTTTTGGACAGACATCTAGCACAGATAGTATATATCATTCCAGAAGCTGTGAATATTGACAAAGTGATGATTCATGACAAGAAGACATTATGTATGAAACCAGAAATGATAATCAGTCTTCAATTAGATATTGTAAAAGGTCACTCCGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTATCAAAATACTTTGTCATGCATCCGGAGGTACTTTTCTACATGACTATTAGAAAGCAATTGTACTTTATAATTCAAATAAAACTGCAAAAAATTATGCCAAAGTGAGACAACTCAATAGTAATGGACATGTACTCTGTCCCACGAGGTTGGAGGTTTAAATCCCCATAACCTTATTTGTTGTACACTAAATAGAACAATTATGATAACATACTATTCTCAAACATGGATCAAATGAGATGTAAAAACATTGAATTGAACCCTTGAACTTTCTATCGAGGTTGGCCGTATGAGTATTCAAGCTTTGGAGTTAAAATTTTAATAGCTCAAACCTTTGTCTTTTAGAGTCGGCTTTGGTGTGGGCAAAACCTCCTGAGAATCAGTAGGGATCCATATTTTGATTTTACTAGAATCCATGCTCATAATTTAAGTCCAGGTTGGTAACCATTTTGTTTTTAGTTTCCTCTTTTTTAAATTTATGCTTGTTTTCTCCCAGTTTCCTTACCATGGTTTTCACTTTCCTTGTATTCAAAATCTACAAAAAACCAATTTTCAAAAATTATTTTTCTTAGTTTTCAAAACTTAGTTTGGTTTTTGAAAATATTGTTAGAAAGTAGACAACATAACATAAAAATTTAGAGGTGAAAGTAAAGTCTAGAAGCTTAATTTTGAAAAAGCAAAAACCAAAATGGTTACCAAACATTTGCCTAAACCAAATCCTTCCGTGACTTGTTAGTCCATTTTTTGTGCTCATATTTTGATTATTCTTCTTATTTGGCAAGCAGAAAAGTGAAGTTCCAGAGGGGGCACTACCAGAGCCCTTCAACAGAAGAAAAATGTTCTCTCTTGATCAATTGTCTGATAATTCTTCAGAAAGATCTCAACCAATTTCCATAGAAACTGATTTGTCTTTGGAAGAACTTTGCCCACGTTCATCCTTCAAGAGACATTTCTCTAATAAAGCGGTTTCTAGCGCGGAGATATCAGAACCGGTTGCATCTTCTATCGTTGATTTGCCATCCATTCCAGCTTGTAGCAGCCTGAAAGAAGAGGATACTAATGATGATAAGTTGCTTAAAGATATTCCCACACAGTCAACCTCTCCTCAAGCTGCTGCTGCTAATTCTTCTGAGAGTCCTCATGTCAAGTCTGTACTACCTTCTGCTTCTAGTAGCATAATGACACAAACCCCGGTACAGTTGACGCCGAAGAGATCAATGCTGCCGAGTTCCGACGTGAAAACAAGGAAACCGGCAAGCATTGGAAATGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGTATAGAAGGTGATAATGGTGAGTCGAGCCTCGGTGTGGATGATTTGCAATGCTTTGAAATCCCTGGAAAGAAAAACTTTGTTGATGAGCATTTCCAAAAGAAGAATTATACTAGTGGAGGAGTAATTTGTGAAGAATCATCTTCTTGCTTGCCTGAACTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTTGTGCACAAGATCATAATGAATCGTCTTGATATTACTGAGAGAAGTATGCATGGTTCTTAAAGTGACTGATGCTAATTTGATTTGAATTTTTGCTTGACTTGTACCTGTTTCCTTGCAGGAGAAGTGGAAGAGCAAATTGAGCAGCTGGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAACTAGTGGGGATGTTACTTTTAGGTGAGTCCTTCAAATGTCTTTTAGATCTTTTATATTTATATGTGTGTGTATATATCAGTTCAAAATCATCTAAATATATTATGGTTAAATTGTAAGTTTGGTCCTCATAGTTTAGACAAAGTTAGAATTTCGTCTTTATGGTTTGATAAAACCTCATAAATTGTCCCTATATGATAAAATATTCTCTTAAATCGTCTCCACTATAGGGACTATTTATGAAGCTTTTATCAACTTTATGACTAAATTCTAATTATAAACTAGGGACCAGATTTACAATTTATCCTAATATTATACTTCTCCAAATATCCACCAAAATAGTAATAACACTGCCATCTATTTGATGATTAATTTTTATATTAATAACATTTAAAGAAGTCTTAAACACGTGTGAAAGTCACGATTTTTTTTCGATTTTAAACATAGAAAACTGGATTGTGGCAGAAGTATATAGCTTTAAGGAGATTGGATGACTCTCTCAATGGGGGATATAACTGGATGTGACCCCATGAATGCATTTGTTTACTTGCTAACAACAGTGTCATTTGCTGCAGCATCAACGCGAAGGAAGGCTTAGAATCAGTAGTGGCAAGGTGTCAGACTTCCGCCCCGTGACACGAGGACAGCTCGTATTTGAGAAGCTGCCAAAAGGGGTCACCACGTAATATTGCCTTGCTTTTATTAGGTGTTCATCGTTAAATTACAACTTTAGTCCGTATGGTTTAAAAAAAGTTAGAATTTAGTCTCTATAGTTCAAGTTAGAATTTAGTCCTTATGAGAGTTTTATCAAATTACAGGGATTAAATTCTAGTTATAAAACATAGAAAACTAAATTTCTCTTAAATTATAGGGACCAAATTTGCAATTTGACCTATTTTTACGAGGAGATGCCAATTGCAATGCCCAAGTAGTGTGATGAAAGCCATTCGGTTGGTTTGTTGTTTTATGATTTTTGTTTGACTGCTAGTTGTTTTATATGAGTGAAGCTAAGTCACAAAACTTTGCACTTTTTTTGGGGGAAAGTTCGGTAGAGAATTTAAAAACAAGGTATTCAATGAAAA

mRNA sequence

CAACGGTCAAAAAACATTGAGAAAATATATATATATATATGGAAAAATGGGGCACAGGAATCAAAGGCAAAATTTCCCTCGTATCGGTAATTCACTACTTTCCTCGGCAGCTCCATATATTGTTTTTGTTGCTGTTAATCAAGGAGGCCACTTGTTGAGTTATTCTAGAATGGGTGAAAAAACATTTGAAGATGGTGGCCAAAATGTTTCAGGCATTGAAACCAATCCTTCTATTGACAAACCAATTGAAGGAATTTATGGTAAACAGAATTCAGACAGTAACATTGCATGTGTGACACCAGAGAAAGCAGATGAGTATTTGAAAGGAAAATTGAAAGAAGAAGGGATCAAACTTCAAGAAAAATGCCAATCAATTGTAGAGTTCTTTACTTGCTTGACTTCCTCTATGAGGCTGCTTAGAATGAGAAAAAAGTTGTCTACCTTTCACAATGTATCCTGCCAGGTGTCGGTTATGACAAAAAGAAAGTTTTTGGACAGACATCTAGCACAGATAGTATATATCATTCCAGAAGCTGTGAATATTGACAAAGTGATGATTCATGACAAGAAGACATTATGTATGAAACCAGAAATGATAATCAGTCTTCAATTAGATATTGTAAAAGGTCACTCCGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTATCAAAATACTTTGTCATGCATCCGGAGAAAAGTGAAGTTCCAGAGGGGGCACTACCAGAGCCCTTCAACAGAAGAAAAATGTTCTCTCTTGATCAATTGTCTGATAATTCTTCAGAAAGATCTCAACCAATTTCCATAGAAACTGATTTGTCTTTGGAAGAACTTTGCCCACGTTCATCCTTCAAGAGACATTTCTCTAATAAAGCGGTTTCTAGCGCGGAGATATCAGAACCGGTTGCATCTTCTATCGTTGATTTGCCATCCATTCCAGCTTGTAGCAGCCTGAAAGAAGAGGATACTAATGATGATAAGTTGCTTAAAGATATTCCCACACAGTCAACCTCTCCTCAAGCTGCTGCTGCTAATTCTTCTGAGAGTCCTCATGTCAAGTCTGTACTACCTTCTGCTTCTAGTAGCATAATGACACAAACCCCGGTACAGTTGACGCCGAAGAGATCAATGCTGCCGAGTTCCGACGTGAAAACAAGGAAACCGGCAAGCATTGGAAATGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGTATAGAAGGTGATAATGGTGAGTCGAGCCTCGGTGTGGATGATTTGCAATGCTTTGAAATCCCTGGAAAGAAAAACTTTGTTGATGAGCATTTCCAAAAGAAGAATTATACTAGTGGAGGAGTAATTTGTGAAGAATCATCTTCTTGCTTGCCTGAACTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTTGTGCACAAGATCATAATGAATCGTCTTGATATTACTGAGAGAAGAGAAGTGGAAGAGCAAATTGAGCAGCTGGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAACTAGTGGGGATGTTACTTTTAGCATCAACGCGAAGGAAGGCTTAGAATCAGTAGTGGCAAGGTGTCAGACTTCCGCCCCGTGACACGAGGACAGCTCGTATTTGAGAAGCTGCCAAAAGGGGTCACCACGTAATATTGCCTTGCTTTTATTAGGTGTTCATCGTTAAATTACAACTTTAGTCCGTATGGTTTAAAAAAAGTTAGAATTTAGTCTCTATAGTTCAAGTTAGAATTTAGTCCTTATGAGAGTTTTATCAAATTACAGGGATTAAATTCTAGTTATAAAACATAGAAAACTAAATTTCTCTTAAATTATAGGGACCAAATTTGCAATTTGACCTATTTTTACGAGGAGATGCCAATTGCAATGCCCAAGTAGTGTGATGAAAGCCATTCGGTTGGTTTGTTGTTTTATGATTTTTGTTTGACTGCTAGTTGTTTTATATGAGTGAAGCTAAGTCACAAAACTTTGCACTTTTTTTGGGGGAAAGTTCGGTAGAGAATTTAAAAACAAGGTATTCAATGAAAA

Coding sequence (CDS)

ATGGGGCACAGGAATCAAAGGCAAAATTTCCCTCGTATCGGTAATTCACTACTTTCCTCGGCAGCTCCATATATTGTTTTTGTTGCTGTTAATCAAGGAGGCCACTTGTTGAGTTATTCTAGAATGGGTGAAAAAACATTTGAAGATGGTGGCCAAAATGTTTCAGGCATTGAAACCAATCCTTCTATTGACAAACCAATTGAAGGAATTTATGGTAAACAGAATTCAGACAGTAACATTGCATGTGTGACACCAGAGAAAGCAGATGAGTATTTGAAAGGAAAATTGAAAGAAGAAGGGATCAAACTTCAAGAAAAATGCCAATCAATTGTAGAGTTCTTTACTTGCTTGACTTCCTCTATGAGGCTGCTTAGAATGAGAAAAAAGTTGTCTACCTTTCACAATGTATCCTGCCAGGTGTCGGTTATGACAAAAAGAAAGTTTTTGGACAGACATCTAGCACAGATAGTATATATCATTCCAGAAGCTGTGAATATTGACAAAGTGATGATTCATGACAAGAAGACATTATGTATGAAACCAGAAATGATAATCAGTCTTCAATTAGATATTGTAAAAGGTCACTCCGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTATCAAAATACTTTGTCATGCATCCGGAGAAAAGTGAAGTTCCAGAGGGGGCACTACCAGAGCCCTTCAACAGAAGAAAAATGTTCTCTCTTGATCAATTGTCTGATAATTCTTCAGAAAGATCTCAACCAATTTCCATAGAAACTGATTTGTCTTTGGAAGAACTTTGCCCACGTTCATCCTTCAAGAGACATTTCTCTAATAAAGCGGTTTCTAGCGCGGAGATATCAGAACCGGTTGCATCTTCTATCGTTGATTTGCCATCCATTCCAGCTTGTAGCAGCCTGAAAGAAGAGGATACTAATGATGATAAGTTGCTTAAAGATATTCCCACACAGTCAACCTCTCCTCAAGCTGCTGCTGCTAATTCTTCTGAGAGTCCTCATGTCAAGTCTGTACTACCTTCTGCTTCTAGTAGCATAATGACACAAACCCCGGTACAGTTGACGCCGAAGAGATCAATGCTGCCGAGTTCCGACGTGAAAACAAGGAAACCGGCAAGCATTGGAAATGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGTATAGAAGGTGATAATGGTGAGTCGAGCCTCGGTGTGGATGATTTGCAATGCTTTGAAATCCCTGGAAAGAAAAACTTTGTTGATGAGCATTTCCAAAAGAAGAATTATACTAGTGGAGGAGTAATTTGTGAAGAATCATCTTCTTGCTTGCCTGAACTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTTGTGCACAAGATCATAATGAATCGTCTTGATATTACTGAGAGAAGAGAAGTGGAAGAGCAAATTGAGCAGCTGGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAACTAGTGGGGATGTTACTTTTAGCATCAACGCGAAGGAAGGCTTAGAATCAGTAGTGGCAAGGTGTCAGACTTCCGCCCCGTGA

Protein sequence

MGHRNQRQNFPRIGNSLLSSAAPYIVFVAVNQGGHLLSYSRMGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGIKLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPEKSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKAVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHVKSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNGESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVNCSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEGLESVVARCQTSAP

Homology

[Close]

BLAST of Clc01G14580 vs. NCBI nr
Match: XP_008437096.1 (PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo] >TYJ99077.1 CDT1-like protein a [Cucumis melo var. makuwa])

HSP 1 Score: 791.6 bits (2043), Expect = 4.3e-225
Identity = 417/486 (85.80%), Postives = 448/486 (92.18%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKTF+DGG NVS IETNPS+DK IEGI+G QNS+SNIAC+TPEKADEYLKGKLKEE I
Sbjct: 1   MGEKTFDDGGLNVSAIETNPSMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEEI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           KLQEKCQ+IVEFFTCLTSSMRLL+MRKK+STFHNVS QVSVMTKR FLD+HLAQIVYIIP
Sbjct: 61  KLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           EAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVFASRV KYF +H E
Sbjct: 121 EAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTE 180

Query: 222 KSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKA 281
           K+EVPEGALP+PFNRRK+FSLDQLSDNS ERS+P SI++DL+LEELCP SS KRHFS K+
Sbjct: 181 KNEVPEGALPKPFNRRKIFSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSKKS 240

Query: 282 VSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHV 341
           +SS EISEPVASSIV  PSIPACSSLKEEDTN DKLL+DIPT    PQ AAANSSESP V
Sbjct: 241 ISSVEISEPVASSIVFSPSIPACSSLKEEDTN-DKLLEDIPT--LPPQVAAANSSESPLV 300

Query: 342 KSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNG 401
           KSVL SASSSIMTQTPVQLTPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+EGDNG
Sbjct: 301 KSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNG 360

Query: 402 ESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVNC 461
           +SSLGVDDLQ   IPGKKNF+DEHF+KKNYTS  VI +ESSSCLPELV VVYNIFKSVNC
Sbjct: 361 KSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNC 420

Query: 462 SSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEGL 521
           SSITKEELVHKIIMN LDITERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE L
Sbjct: 421 SSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDL 480

Query: 522 ESVVAR 528
           ESVVA+
Sbjct: 481 ESVVAK 480

[Close]

BLAST of Clc01G14580 vs. NCBI nr
Match: XP_038893531.1 (CDT1-like protein a, chloroplastic [Benincasa hispida])

HSP 1 Score: 776.2 bits (2003), Expect = 1.9e-220
Identity = 417/486 (85.80%), Postives = 441/486 (90.74%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKTFEDGGQ V GIE NPS+DK  E   G +NS +NIAC+TPEKADE+LKGKLKEEGI
Sbjct: 1   MGEKTFEDGGQKVLGIEINPSLDKSTE---GTKNSGNNIACMTPEKADEHLKGKLKEEGI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           KLQEKCQ+IVEFFTCLTSS+RLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP
Sbjct: 61  KLQEKCQTIVEFFTCLTSSVRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGH EHSDFLALHKVFASRV+KYFVMHPE
Sbjct: 121 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHFEHSDFLALHKVFASRVTKYFVMHPE 180

Query: 222 KSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKA 281
           KSEVPEG LPEPFNRRKM SLDQ SDNS   SQPISIETDLSLEEL P SSFKRHFS KA
Sbjct: 181 KSEVPEGTLPEPFNRRKMSSLDQSSDNS---SQPISIETDLSLEELRPHSSFKRHFSKKA 240

Query: 282 VSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHV 341
           VSS E SE VASSIV LPS PAC SLKEED N DKLL++IPTQS SPQ  AANSSESP +
Sbjct: 241 VSSTETSESVASSIVGLPSTPAC-SLKEEDIN-DKLLEEIPTQSISPQVGAANSSESP-L 300

Query: 342 KSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNG 401
             +  SASS+IMTQTPVQLTPKRSMLPSSDVKTRKPAS+G+VCKPAKRFLNFSG+EGDNG
Sbjct: 301 GKLASSASSTIMTQTPVQLTPKRSMLPSSDVKTRKPASVGSVCKPAKRFLNFSGMEGDNG 360

Query: 402 ESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGG-VICEESSSCLPELVRVVYNIFKSVN 461
           ESSL VDDLQC+EIP KKNF+DEHFQKK+ TS G VIC+ESSSCLPE+VRVVYNIFKSVN
Sbjct: 361 ESSLDVDDLQCYEIPEKKNFLDEHFQKKSNTSSGEVICQESSSCLPEIVRVVYNIFKSVN 420

Query: 462 CSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEG 521
           CSSITKEELVHKIIMN LDITERREVE+QIEQLEKLVPNWISKK T SGDVTFSINAKE 
Sbjct: 421 CSSITKEELVHKIIMNCLDITERREVEQQIEQLEKLVPNWISKKSTPSGDVTFSINAKED 477

Query: 522 LESVVA 527
           LESV++
Sbjct: 481 LESVLS 477

[Close]

BLAST of Clc01G14580 vs. NCBI nr
Match: XP_011651063.1 (CDT1-like protein a, chloroplastic [Cucumis sativus] >KGN64220.1 hypothetical protein Csa_013532 [Cucumis sativus])

HSP 1 Score: 749.6 bits (1934), Expect = 1.9e-212
Identity = 397/488 (81.35%), Postives = 433/488 (88.73%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKTFEDGGQN+S IETNPS     +GIYG +NS+SNIAC+TPEKADEYLKGKLKE+GI
Sbjct: 1   MGEKTFEDGGQNLSAIETNPS-----KGIYGNENSESNIACMTPEKADEYLKGKLKEDGI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           KLQEKC++IVEFFTC TSS+RLL+MRK++STFHNVS QVS+MTKR FLD+HLAQI+YIIP
Sbjct: 61  KLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           EAVNIDKVMIHDKKTLCMKPEMII+LQLD+VKGHSEHSDFLALHKVFASRVSKYF MHPE
Sbjct: 121 EAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPE 180

Query: 222 KSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISI--ETDLSLEELCPRSSFKRHFSN 281
           KSEVPEG LP PFNRRK+FSLDQL DNSS RS+PISI  ++DL+LEELCP  SFKRHFS 
Sbjct: 181 KSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSK 240

Query: 282 KAVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESP 341
           K +SS EISE VASSIV  PSIPA            KLL+DIPT   SPQ A ANSS+SP
Sbjct: 241 KFISSIEISELVASSIVVSPSIPA------------KLLEDIPT--ISPQVATANSSDSP 300

Query: 342 HVKSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGD 401
            VKSV+ SASSSIMTQTPVQLTPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+E D
Sbjct: 301 LVKSVMSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESD 360

Query: 402 NGESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSV 461
           NG+SSLGVD LQC+EIPGKKNF+DEH QKKNYTS  VI +ESSSCLPELV VVYNIFKSV
Sbjct: 361 NGKSSLGVDGLQCYEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSV 420

Query: 462 NCSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKE 521
           NCSSITKEELVHKIIMN LDITERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE
Sbjct: 421 NCSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKE 469

Query: 522 GLESVVAR 528
            LESVVA+
Sbjct: 481 DLESVVAK 469

[Close]

BLAST of Clc01G14580 vs. NCBI nr
Match: XP_008437112.1 (PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 654.8 bits (1688), Expect = 6.3e-184
Identity = 349/407 (85.75%), Postives = 374/407 (91.89%), Query Frame = 0


Query: 121 MRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIPEAVNIDKVMIHDKKTLCMK 180
           MRLL+MRKK+STFHNVS QVSVMTKR FLD+HLAQIVYIIPEAVNIDKVMIHDKKT CMK
Sbjct: 1   MRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIPEAVNIDKVMIHDKKTSCMK 60

Query: 181 PEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPEKSEVPEGALPEPFNRRKMF 240
           PEMIISLQLD+VKGHSEHSDFLALHKVFASRV KYF +H EK+EVPEGALP+PFNRRK+F
Sbjct: 61  PEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTEKNEVPEGALPKPFNRRKIF 120

Query: 241 SLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKAVSSAEISEPVASSIVDLPS 300
           SLDQLSDNS ERS+P SI++DL+LEELCP SS KRHFS K++SS EISEPVASSIV  PS
Sbjct: 121 SLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSKKSISSVEISEPVASSIVFSPS 180

Query: 301 IPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHVKSVLPSASSSIMTQTPVQL 360
           IPACSSLKEEDTN DKLL+DIPT    PQ AAANSSESP VKSVL SASSSIMTQTPVQL
Sbjct: 181 IPACSSLKEEDTN-DKLLEDIPT--LPPQVAAANSSESPLVKSVLSSASSSIMTQTPVQL 240

Query: 361 TPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNGESSLGVDDLQCFEIPGKKN 420
           TPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+EGDNG+SSLGVDDLQ   IPGKKN
Sbjct: 241 TPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQ---IPGKKN 300

Query: 421 FVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVNCSSITKEELVHKIIMNRLDI 480
           F+DEHF+KKNYTS  VI +ESSSCLPELV VVYNIFKSVNCSSITKEELVHKIIMN LDI
Sbjct: 301 FLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDI 360

Query: 481 TERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEGLESVVAR 528
           TERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE LESVVA+
Sbjct: 361 TERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK 401

[Close]

BLAST of Clc01G14580 vs. NCBI nr
Match: XP_022954488.1 (CDT1-like protein a, chloroplastic [Cucurbita moschata])

HSP 1 Score: 651.7 bits (1680), Expect = 5.3e-183
Identity = 354/487 (72.69%), Postives = 403/487 (82.75%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKT EDG  +VS IE NP    P      K+    N+ C+TPEK DEY KGKLKE GI
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPP-----HKEGVSGNVVCMTPEKGDEYSKGKLKEGGI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           K QEK QSIVEFFTCL SS+RLL MRKKLSTFHNVS QVSVM+KRKFL RHLAQIVY IP
Sbjct: 61  KHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           E V IDKV IHDKKT CMK EMIISL+LD VKGHSEHSDFLALHKVFASRV+K+FVMHPE
Sbjct: 121 EVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPE 180

Query: 222 KSEVPEGALPEPFNRRKM-FSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNK 281
           KSEVPE ALPEPFNRR + FSLDQ +D+SSE+S+PIS++T+LS E+  P+S+FKRHFS K
Sbjct: 181 KSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKK 240

Query: 282 AVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPH 341
           AV   E+SEP+ SS+V LPS PAC SLKEE+  +D LL+D+P QS SP+ A ANSSESP 
Sbjct: 241 AVPKTELSEPITSSVVGLPSAPAC-SLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPV 300

Query: 342 VKSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDN 401
           VK    S SS+I+TQTPVQ TPKRSMLPSSDVK RK AS+G++CKPAKRFLNFSG+EGDN
Sbjct: 301 VKPA-TSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDN 360

Query: 402 GESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVN 461
           G  S  VDDLQC++IP K++F  E + +K+ +SG V CEE SSCLPELVRV+YN+FKSVN
Sbjct: 361 GPLSFSVDDLQCYDIPEKRDFHYERY-RKDSSSGRVTCEE-SSCLPELVRVIYNVFKSVN 420

Query: 462 CSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEG 521
           C+SITKEELVHKIIMN LDITERREVEE+IEQLEK VP+WISKKLT SGDVTFSI+AKE 
Sbjct: 421 CASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKED 477

Query: 522 LESVVAR 528
           LESVVA+
Sbjct: 481 LESVVAK 477

[Close]

BLAST of Clc01G14580 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 7.2e-42
Identity = 150/474 (31.65%), Postives = 237/474 (50.00%), Query Frame = 0


Query: 84  TPEKADEYLKGKLKEEGIKLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVM 143
           +P K     K   KE   KL EK +++ +FF  L +SM L ++R    TF N+S Q+  +
Sbjct: 95  SPSKRKSSNKNAEKE---KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHL 154

Query: 144 TKRKFLDRHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSE---HSD 203
           T+R+F   HLAQI +I+PEA+ I +V+IHD+ T CMKP++ ++L  D V+ + +    S 
Sbjct: 155 TERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESK 214

Query: 204 FLALHKVFASRVSKYFVMHPEKSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIET 263
            +AL KVF +R++ +   HP+  EVPE  LPEPFNRRK        +NS+   + +S   
Sbjct: 215 KIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKPV------ENSNVEVKRVS--- 274

Query: 264 DLSLEELCPRSSFKRHFSNKAVS-----SAEISEPVASSIVDLPSIPACSSLKEEDTNDD 323
             SL E        + FS+   S     ++ +++P +S I   P+    +S   + T  +
Sbjct: 275 --SLMEEMASIPASKLFSSPITSTPVKTTSSLAKPTSSQINIAPTPTKPTSTPAKQTLSE 334

Query: 324 KLLKDIPTQSTSPQAAAANSSESPHVKSVLPSASSSIMTQTPVQL--TPKRSMLPSSDVK 383
             +  +PT    P    +  ++ P   +++   S+ ++T TP +   TP R M  S   +
Sbjct: 335 --INILPT----PVKPVSTLAKFPSTPAIID--STPVITATPPEFASTPARLMSTSLAAR 394

Query: 384 TRKPA---------SIGNVCKPAKR--FLNFSGIEGDN--------------GESSLGVD 443
             K +         S     K  +R   LNF     D                E  +  D
Sbjct: 395 PLKRSNGHTNPDDISADPPTKLVRRSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSD 454

Query: 444 DLQCFEIPGK-KNFVDEHFQKKNYTSGGVIC-----EESSSCLPELVRVVYNIFKSVNCS 503
           D     +P K ++ + E  +K        I       +  +CLP+L  V++ + +S+   
Sbjct: 455 DEILSILPDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRW 514

Query: 504 SITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSIN 517
            ITKEELVHKII    DIT+R+EVEEQ+  L+++VP W+S+K ++SGDV   IN
Sbjct: 515 VITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCIN 546

[Close]

BLAST of Clc01G14580 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.8e-35
Identity = 130/447 (29.08%), Postives = 225/447 (50.34%), Query Frame = 0


Query: 98  EEGIKLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIV 157
           E  IKL E+ + + EFF  L +++RLL+++   +T+ N+  ++  +T R F   HLAQ+ 
Sbjct: 41  ESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSYDHLAQMK 100

Query: 158 YIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLD--IVKGHSEHSDFLALHKVFASRVSKY 217
           +I PEA+ + +V+   + T CMKP + I L  D  +V+     + ++ L KVF S++  +
Sbjct: 101 HIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYMELRKVFHSKLVDF 160

Query: 218 FVMHPEKSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKR 277
              HP K E+P+  LPEPFN  +  S   +        +      D+ +EE+      + 
Sbjct: 161 RKAHP-KDEIPKELLPEPFNSPQRDSYSGIVSVGLGEPKLEVGGFDVHMEEI----EQEE 220

Query: 278 HFSNKAVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTS-------P 337
              NK +  + +S  + S IV+ P +   S+  ++ +   +L+   PT   S       P
Sbjct: 221 QDVNKVIPDSTLSH-IESRIVETP-VKDLSTPSKDLSTPIRLMSATPTLQLSKRCIELTP 280

Query: 338 QAAAANSSESPHVKSVLPSASSSIMT--QTPVQLTPKRSMLPSSDVKTRKPASIGNVCKP 397
           +    NS  S +  +  PS S +  T  +  ++     +      +   +   + +V  P
Sbjct: 281 EGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDGLLQSVKGP 340

Query: 398 AKRFLNFSGIEGDNGESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVI----CEESS 457
           + R LNF  +E    E ++  DD+       K N+  ++    +     +I     E   
Sbjct: 341 S-RSLNFDTLE----EETIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIERPKTEPEK 400

Query: 458 SCLPELVRVVYNIFKSVNCSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWIS 517
             LP+LV +++ +F S N + ITKEEL++KII N+++IT+RREVEEQ+  + +LVP+WIS
Sbjct: 401 HNLPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWIS 460

Query: 518 KKLTTSGDVTFSINAKEGLESVVARCQ 530
           +   +SGD+   IN     E+V AR +
Sbjct: 461 ETKASSGDLLVRINKMSTAETVRARLE 475

[Close]

BLAST of Clc01G14580 vs. ExPASy TrEMBL
Match: A0A5D3BIY5 (CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002810 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 2.1e-225
Identity = 417/486 (85.80%), Postives = 448/486 (92.18%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKTF+DGG NVS IETNPS+DK IEGI+G QNS+SNIAC+TPEKADEYLKGKLKEE I
Sbjct: 1   MGEKTFDDGGLNVSAIETNPSMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEEI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           KLQEKCQ+IVEFFTCLTSSMRLL+MRKK+STFHNVS QVSVMTKR FLD+HLAQIVYIIP
Sbjct: 61  KLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           EAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVFASRV KYF +H E
Sbjct: 121 EAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTE 180

Query: 222 KSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKA 281
           K+EVPEGALP+PFNRRK+FSLDQLSDNS ERS+P SI++DL+LEELCP SS KRHFS K+
Sbjct: 181 KNEVPEGALPKPFNRRKIFSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSKKS 240

Query: 282 VSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHV 341
           +SS EISEPVASSIV  PSIPACSSLKEEDTN DKLL+DIPT    PQ AAANSSESP V
Sbjct: 241 ISSVEISEPVASSIVFSPSIPACSSLKEEDTN-DKLLEDIPT--LPPQVAAANSSESPLV 300

Query: 342 KSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNG 401
           KSVL SASSSIMTQTPVQLTPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+EGDNG
Sbjct: 301 KSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNG 360

Query: 402 ESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVNC 461
           +SSLGVDDLQ   IPGKKNF+DEHF+KKNYTS  VI +ESSSCLPELV VVYNIFKSVNC
Sbjct: 361 KSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNC 420

Query: 462 SSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEGL 521
           SSITKEELVHKIIMN LDITERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE L
Sbjct: 421 SSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDL 480

Query: 522 ESVVAR 528
           ESVVA+
Sbjct: 481 ESVVAK 480

[Close]

BLAST of Clc01G14580 vs. ExPASy TrEMBL
Match: A0A1S3ATS0 (CDT1-like protein a, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482615 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 2.1e-225
Identity = 417/486 (85.80%), Postives = 448/486 (92.18%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKTF+DGG NVS IETNPS+DK IEGI+G QNS+SNIAC+TPEKADEYLKGKLKEE I
Sbjct: 1   MGEKTFDDGGLNVSAIETNPSMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEEI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           KLQEKCQ+IVEFFTCLTSSMRLL+MRKK+STFHNVS QVSVMTKR FLD+HLAQIVYIIP
Sbjct: 61  KLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           EAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVFASRV KYF +H E
Sbjct: 121 EAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTE 180

Query: 222 KSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKA 281
           K+EVPEGALP+PFNRRK+FSLDQLSDNS ERS+P SI++DL+LEELCP SS KRHFS K+
Sbjct: 181 KNEVPEGALPKPFNRRKIFSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSKKS 240

Query: 282 VSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHV 341
           +SS EISEPVASSIV  PSIPACSSLKEEDTN DKLL+DIPT    PQ AAANSSESP V
Sbjct: 241 ISSVEISEPVASSIVFSPSIPACSSLKEEDTN-DKLLEDIPT--LPPQVAAANSSESPLV 300

Query: 342 KSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNG 401
           KSVL SASSSIMTQTPVQLTPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+EGDNG
Sbjct: 301 KSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNG 360

Query: 402 ESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVNC 461
           +SSLGVDDLQ   IPGKKNF+DEHF+KKNYTS  VI +ESSSCLPELV VVYNIFKSVNC
Sbjct: 361 KSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNC 420

Query: 462 SSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEGL 521
           SSITKEELVHKIIMN LDITERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE L
Sbjct: 421 SSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDL 480

Query: 522 ESVVAR 528
           ESVVA+
Sbjct: 481 ESVVAK 480

[Close]

BLAST of Clc01G14580 vs. ExPASy TrEMBL
Match: A0A0A0LQM9 (CDT1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043230 PE=3 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 9.0e-213
Identity = 397/488 (81.35%), Postives = 433/488 (88.73%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKTFEDGGQN+S IETNPS     +GIYG +NS+SNIAC+TPEKADEYLKGKLKE+GI
Sbjct: 1   MGEKTFEDGGQNLSAIETNPS-----KGIYGNENSESNIACMTPEKADEYLKGKLKEDGI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           KLQEKC++IVEFFTC TSS+RLL+MRK++STFHNVS QVS+MTKR FLD+HLAQI+YIIP
Sbjct: 61  KLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           EAVNIDKVMIHDKKTLCMKPEMII+LQLD+VKGHSEHSDFLALHKVFASRVSKYF MHPE
Sbjct: 121 EAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPE 180

Query: 222 KSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISI--ETDLSLEELCPRSSFKRHFSN 281
           KSEVPEG LP PFNRRK+FSLDQL DNSS RS+PISI  ++DL+LEELCP  SFKRHFS 
Sbjct: 181 KSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSK 240

Query: 282 KAVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESP 341
           K +SS EISE VASSIV  PSIPA            KLL+DIPT   SPQ A ANSS+SP
Sbjct: 241 KFISSIEISELVASSIVVSPSIPA------------KLLEDIPT--ISPQVATANSSDSP 300

Query: 342 HVKSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGD 401
            VKSV+ SASSSIMTQTPVQLTPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+E D
Sbjct: 301 LVKSVMSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESD 360

Query: 402 NGESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSV 461
           NG+SSLGVD LQC+EIPGKKNF+DEH QKKNYTS  VI +ESSSCLPELV VVYNIFKSV
Sbjct: 361 NGKSSLGVDGLQCYEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSV 420

Query: 462 NCSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKE 521
           NCSSITKEELVHKIIMN LDITERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE
Sbjct: 421 NCSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKE 469

Query: 522 GLESVVAR 528
            LESVVA+
Sbjct: 481 DLESVVAK 469

[Close]

BLAST of Clc01G14580 vs. ExPASy TrEMBL
Match: A0A1S3AT80 (CDT1-like protein a, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482615 PE=3 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 3.0e-184
Identity = 349/407 (85.75%), Postives = 374/407 (91.89%), Query Frame = 0


Query: 121 MRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIPEAVNIDKVMIHDKKTLCMK 180
           MRLL+MRKK+STFHNVS QVSVMTKR FLD+HLAQIVYIIPEAVNIDKVMIHDKKT CMK
Sbjct: 1   MRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIPEAVNIDKVMIHDKKTSCMK 60

Query: 181 PEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPEKSEVPEGALPEPFNRRKMF 240
           PEMIISLQLD+VKGHSEHSDFLALHKVFASRV KYF +H EK+EVPEGALP+PFNRRK+F
Sbjct: 61  PEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTEKNEVPEGALPKPFNRRKIF 120

Query: 241 SLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNKAVSSAEISEPVASSIVDLPS 300
           SLDQLSDNS ERS+P SI++DL+LEELCP SS KRHFS K++SS EISEPVASSIV  PS
Sbjct: 121 SLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSKKSISSVEISEPVASSIVFSPS 180

Query: 301 IPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPHVKSVLPSASSSIMTQTPVQL 360
           IPACSSLKEEDTN DKLL+DIPT    PQ AAANSSESP VKSVL SASSSIMTQTPVQL
Sbjct: 181 IPACSSLKEEDTN-DKLLEDIPT--LPPQVAAANSSESPLVKSVLSSASSSIMTQTPVQL 240

Query: 361 TPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDNGESSLGVDDLQCFEIPGKKN 420
           TPKRSMLPSS+VKTRKPAS+G+VCKPAKRFLNFSG+EGDNG+SSLGVDDLQ   IPGKKN
Sbjct: 241 TPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQ---IPGKKN 300

Query: 421 FVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVNCSSITKEELVHKIIMNRLDI 480
           F+DEHF+KKNYTS  VI +ESSSCLPELV VVYNIFKSVNCSSITKEELVHKIIMN LDI
Sbjct: 301 FLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDI 360

Query: 481 TERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEGLESVVAR 528
           TERREVEE+IEQLEKLVPNWISKKLT SGDVTFSIN KE LESVVA+
Sbjct: 361 TERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK 401

[Close]

BLAST of Clc01G14580 vs. ExPASy TrEMBL
Match: A0A6J1GR86 (CDT1-like protein a, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456741 PE=3 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 2.6e-183
Identity = 354/487 (72.69%), Postives = 403/487 (82.75%), Query Frame = 0


Query: 42  MGEKTFEDGGQNVSGIETNPSIDKPIEGIYGKQNSDSNIACVTPEKADEYLKGKLKEEGI 101
           MGEKT EDG  +VS IE NP    P      K+    N+ C+TPEK DEY KGKLKE GI
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPP-----HKEGVSGNVVCMTPEKGDEYSKGKLKEGGI 60

Query: 102 KLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIVYIIP 161
           K QEK QSIVEFFTCL SS+RLL MRKKLSTFHNVS QVSVM+KRKFL RHLAQIVY IP
Sbjct: 61  KHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIP 120

Query: 162 EAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSEHSDFLALHKVFASRVSKYFVMHPE 221
           E V IDKV IHDKKT CMK EMIISL+LD VKGHSEHSDFLALHKVFASRV+K+FVMHPE
Sbjct: 121 EVVTIDKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPE 180

Query: 222 KSEVPEGALPEPFNRRKM-FSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKRHFSNK 281
           KSEVPE ALPEPFNRR + FSLDQ +D+SSE+S+PIS++T+LS E+  P+S+FKRHFS K
Sbjct: 181 KSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKK 240

Query: 282 AVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTSPQAAAANSSESPH 341
           AV   E+SEP+ SS+V LPS PAC SLKEE+  +D LL+D+P QS SP+ A ANSSESP 
Sbjct: 241 AVPKTELSEPITSSVVGLPSAPAC-SLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPV 300

Query: 342 VKSVLPSASSSIMTQTPVQLTPKRSMLPSSDVKTRKPASIGNVCKPAKRFLNFSGIEGDN 401
           VK    S SS+I+TQTPVQ TPKRSMLPSSDVK RK AS+G++CKPAKRFLNFSG+EGDN
Sbjct: 301 VKPA-TSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDN 360

Query: 402 GESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVICEESSSCLPELVRVVYNIFKSVN 461
           G  S  VDDLQC++IP K++F  E + +K+ +SG V CEE SSCLPELVRV+YN+FKSVN
Sbjct: 361 GPLSFSVDDLQCYDIPEKRDFHYERY-RKDSSSGRVTCEE-SSCLPELVRVIYNVFKSVN 420

Query: 462 CSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSINAKEG 521
           C+SITKEELVHKIIMN LDITERREVEE+IEQLEK VP+WISKKLT SGDVTFSI+AKE 
Sbjct: 421 CASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKED 477

Query: 522 LESVVAR 528
           LESVVA+
Sbjct: 481 LESVVAK 477

[Close]

BLAST of Clc01G14580 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A )

HSP 1 Score: 173.3 bits (438), Expect = 5.1e-43
Identity = 150/474 (31.65%), Postives = 237/474 (50.00%), Query Frame = 0


Query: 84  TPEKADEYLKGKLKEEGIKLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVM 143
           +P K     K   KE   KL EK +++ +FF  L +SM L ++R    TF N+S Q+  +
Sbjct: 95  SPSKRKSSNKNAEKE---KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHL 154

Query: 144 TKRKFLDRHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDIVKGHSE---HSD 203
           T+R+F   HLAQI +I+PEA+ I +V+IHD+ T CMKP++ ++L  D V+ + +    S 
Sbjct: 155 TERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESK 214

Query: 204 FLALHKVFASRVSKYFVMHPEKSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIET 263
            +AL KVF +R++ +   HP+  EVPE  LPEPFNRRK        +NS+   + +S   
Sbjct: 215 KIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKPV------ENSNVEVKRVS--- 274

Query: 264 DLSLEELCPRSSFKRHFSNKAVS-----SAEISEPVASSIVDLPSIPACSSLKEEDTNDD 323
             SL E        + FS+   S     ++ +++P +S I   P+    +S   + T  +
Sbjct: 275 --SLMEEMASIPASKLFSSPITSTPVKTTSSLAKPTSSQINIAPTPTKPTSTPAKQTLSE 334

Query: 324 KLLKDIPTQSTSPQAAAANSSESPHVKSVLPSASSSIMTQTPVQL--TPKRSMLPSSDVK 383
             +  +PT    P    +  ++ P   +++   S+ ++T TP +   TP R M  S   +
Sbjct: 335 --INILPT----PVKPVSTLAKFPSTPAIID--STPVITATPPEFASTPARLMSTSLAAR 394

Query: 384 TRKPA---------SIGNVCKPAKR--FLNFSGIEGDN--------------GESSLGVD 443
             K +         S     K  +R   LNF     D                E  +  D
Sbjct: 395 PLKRSNGHTNPDDISADPPTKLVRRSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSD 454

Query: 444 DLQCFEIPGK-KNFVDEHFQKKNYTSGGVIC-----EESSSCLPELVRVVYNIFKSVNCS 503
           D     +P K ++ + E  +K        I       +  +CLP+L  V++ + +S+   
Sbjct: 455 DEILSILPDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRW 514

Query: 504 SITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWISKKLTTSGDVTFSIN 517
            ITKEELVHKII    DIT+R+EVEEQ+  L+++VP W+S+K ++SGDV   IN
Sbjct: 515 VITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCIN 546

[Close]

BLAST of Clc01G14580 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B )

HSP 1 Score: 151.0 bits (380), Expect = 2.7e-36
Identity = 130/447 (29.08%), Postives = 225/447 (50.34%), Query Frame = 0


Query: 98  EEGIKLQEKCQSIVEFFTCLTSSMRLLRMRKKLSTFHNVSCQVSVMTKRKFLDRHLAQIV 157
           E  IKL E+ + + EFF  L +++RLL+++   +T+ N+  ++  +T R F   HLAQ+ 
Sbjct: 41  ESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSYDHLAQMK 100

Query: 158 YIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLD--IVKGHSEHSDFLALHKVFASRVSKY 217
           +I PEA+ + +V+   + T CMKP + I L  D  +V+     + ++ L KVF S++  +
Sbjct: 101 HIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYMELRKVFHSKLVDF 160

Query: 218 FVMHPEKSEVPEGALPEPFNRRKMFSLDQLSDNSSERSQPISIETDLSLEELCPRSSFKR 277
              HP K E+P+  LPEPFN  +  S   +        +      D+ +EE+      + 
Sbjct: 161 RKAHP-KDEIPKELLPEPFNSPQRDSYSGIVSVGLGEPKLEVGGFDVHMEEI----EQEE 220

Query: 278 HFSNKAVSSAEISEPVASSIVDLPSIPACSSLKEEDTNDDKLLKDIPTQSTS-------P 337
              NK +  + +S  + S IV+ P +   S+  ++ +   +L+   PT   S       P
Sbjct: 221 QDVNKVIPDSTLSH-IESRIVETP-VKDLSTPSKDLSTPIRLMSATPTLQLSKRCIELTP 280

Query: 338 QAAAANSSESPHVKSVLPSASSSIMT--QTPVQLTPKRSMLPSSDVKTRKPASIGNVCKP 397
           +    NS  S +  +  PS S +  T  +  ++     +      +   +   + +V  P
Sbjct: 281 EGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDGLLQSVKGP 340

Query: 398 AKRFLNFSGIEGDNGESSLGVDDLQCFEIPGKKNFVDEHFQKKNYTSGGVI----CEESS 457
           + R LNF  +E    E ++  DD+       K N+  ++    +     +I     E   
Sbjct: 341 S-RSLNFDTLE----EETIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIERPKTEPEK 400

Query: 458 SCLPELVRVVYNIFKSVNCSSITKEELVHKIIMNRLDITERREVEEQIEQLEKLVPNWIS 517
             LP+LV +++ +F S N + ITKEEL++KII N+++IT+RREVEEQ+  + +LVP+WIS
Sbjct: 401 HNLPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWIS 460

Query: 518 KKLTTSGDVTFSINAKEGLESVVARCQ 530
           +   +SGD+   IN     E+V AR +
Sbjct: 461 ETKASSGDLLVRINKMSTAETVRARLE 475

The following BLAST results are available for this feature:

BLAST of Clc01G14580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437096.1	4.3e-225	85.80	PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo] >TYJ9907...	[more]
XP_038893531.1	1.9e-220	85.80	CDT1-like protein a, chloroplastic [Benincasa hispida]	[more]
XP_011651063.1	1.9e-212	81.35	CDT1-like protein a, chloroplastic [Cucumis sativus] >KGN64220.1 hypothetical pr...	[more]
XP_008437112.1	6.3e-184	85.75	PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_022954488.1	5.3e-183	72.69	CDT1-like protein a, chloroplastic [Cucurbita moschata]	[more]

BLAST of Clc01G14580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW9	7.2e-42	31.65	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]
Q9M1S9	3.8e-35	29.08	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]

BLAST of Clc01G14580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIY5	2.1e-225	85.80	CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G...	[more]
A0A1S3ATS0	2.1e-225	85.80	CDT1-like protein a, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LQM9	9.0e-213	81.35	CDT1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043230 PE=3 S...	[more]
A0A1S3AT80	3.0e-184	85.75	CDT1-like protein a, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1GR86	2.6e-183	72.69	CDT1-like protein a, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456741...	[more]

BLAST of Clc01G14580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31270.1	5.1e-43	31.65	homolog of yeast CDT1 A	[more]
AT3G54710.1	2.7e-36	29.08	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 476..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..378
None	No IPR available	PANTHER	PTHR28637	DNA REPLICATION FACTOR CDT1	coord: 71..529
None	No IPR available	PANTHER	PTHR28637:SF13	EXPRESSED PROTEIN	coord: 71..529
None	No IPR available	CDD	cd08674	Cdt1_m	coord: 84..238 e-value: 1.33252E-34 score: 126.656
IPR014939	CDT1 Geminin-binding domain-like	SMART	SM01075	CDT1_2	coord: 103..232 e-value: 4.5E-5 score: 28.6
IPR014939	CDT1 Geminin-binding domain-like	PFAM	PF08839	CDT1	coord: 108..170 e-value: 4.5E-10 score: 40.1
IPR038090	DNA replication factor Cdt1, C-terminal WH domain superfamily	GENE3D	1.10.10.1420		coord: 439..532 e-value: 2.4E-20 score: 74.5
IPR032054	DNA replication factor Cdt1, C-terminal	PFAM	PF16679	CDT1_C	coord: 442..503 e-value: 1.1E-7 score: 32.1
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 100..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G14580.2	Clc01G14580.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0071163	DNA replication preinitiation complex assembly
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0070182	DNA polymerase binding