Clc01G14490 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAGGAGAAATTCTCAGTCAAAATTTCTGCTCGAAATCCAGCGTTATCCTCAACTCCTCGTCTTCTTCATCTCTGGATCGCCTTCTTCTTCTTATAAATCTTCAATGGCTTCTTTCTTCTACCATTTCGGAAATCTACTGAAAGAGAAATGACTGAAGGATTGATTGCTAATTAAGAGCTGAAGAGTATGTTTTTCCTCTTCTTCTCTCTTTGATTTTTCCTTTCCTTTTGCTTTCACTTGTCATTCTCTATAATCAATTCCACGACTCTGCCGCTGAATTTGCTTTTTCCTTTTTTCTTTTTTTTTTTTCTATTTCTTTTGTTCTTTCCTTTTTCACCAGCCGGATTCCTCGATCAGGTGCTTCTTTCATTCTTCTATATATTCAAATCAACTAATTCGTCCGAGACCACCGGAAAACTCACATTCTTCCAAAAACCTAGCCGGAATTCCGATCGGAGAAGACGATAAGAAAGAGAAATCAATGGCTCAAACGGCGTCGTTTAGTTCCGGTAACCATAAAACTTCTTCCAATTTGGAGCGCTTTCTTCAATGCGTTACTCCTTGTGTTCCTTGGCGAACTCTTCCTCGGGTAATTTTCTTCTTCTTACAATTTATTTTTTTTTATTTTATTGTTTCATTATTCTTTATTCTTCACTACAATTCCTACATTTTCCCCCAATTCCCACCATAACTTTTCATTTATTTATTTCTGCATTTGTCGATGCTCATCCATGTGATGCACGTTTGGGTAATTTTTATTTTAACTTTCTTTCCAATTTCCACCATAATCTTAATCCAATCGACAAAATAACAATTTAAAATGCCCCCATTTTTTCAATCGACGTTGTAGTATTCCATTCCTCCACGGTCAGCTTTGTAATATTTTCTTGTTTAAAATGAAAAAGGGGTTGAAAAAAAGGCCATTCTTAATTTTCTTACCATTTCTGATTTTTTACAGATATTAATTATATTTTTGATATTTTGTGTGGAGGAGAGAGAGAGAGAGAGTTTTTTTTCTTTTTCTTTTTTTTTTTTCCATAAAAAATGAAAGAGTCCGGCATAATACAAAACGTGGCGGATAGATTTCTAATTTCCTTAAACTCGCTGAGTCACTCTCCTTGCCTTTCAATGTCAATTTTCTATGGGCCCTTAATGGGCCGATGTCTTTACCGTTCTGGGCCCATTAAGACGTCGACTGGTCCTATATTCTCCGAATATACTCGGAATATACCTCCCTCTTTCTATACCAATTTTTAACCATTATTTTCCATTCAACATGTATTTTTTTTCCTTCTCTTTCTTGAGGGGGCGAAATTTGTAGTGAGAAGATAAATATTTAAACATAAATATTTTTTTTTTGGTTTTAATTTTTAAAAAATTAAATCTATTTTTTCCGTATTTCTTACAATAATTTACTATTGTTTAAAAATATAATAATTAAATTTTTAGCCAATTTTTAGCCAAAATTCGAAAACTAAAAGAATTAGACAGCAAAAAAATAAATTTGGGATGAAATTAGTGTTACAAAAACATAGCCTTAATTATAGGTTTAAATACTGATTTGATCCCGTATTTTTAAATTTTTTTTTGTTCATTTTTGTCATTTTACTTTGAAAATGTTCATTTTAGTTCCTACAATTTCAAATTTTAGTTCATTTTGGTTATTGTACTTATATAATATTAATTTGAGTCTTTGTGTTTTCAATTTTGGAATATTTTTTTCATTGTATTTTTAAAAAGTGACTTCTCTTGAACAAAATGAACCAATGTAGAAACCAAAATAAATATTTAGAAACCAAAATGAAAACCATCAGAATGTAGTATTTAAATCTTAATGATAAGAATTTGAATATAATTTATTAAACTACTATTTTTTAAAAAACATATTTATAAAAAAGACGGAAAATGAAATGGCCTTCCTGTTCTTGTCTCGTCTCTTGATCCTTAATATAATGAAATTTTAGAAACTAATTTTTAAAGCACAATTGTTTTGAAACTAATTGACAGAAATAAGAAAATTTAGTGCTGGATCGAAGCCGCCCCCACCTTATCTTCAAAATTTCCTATTTTTGTCGTTTGCTTAAAAATACAAAAACAAAAAATAACTCTAATTTTGAAATTACCCTACAAGAATGGCCATAAAGTAACGTGCCTAAGAAACTGGTCCCAAATTAAATAGAAACGACATATAAGATGTTATCAAATGCCTCATCTTTAGAAGTCCTCCCCCCCGCGTCACGTGGCATTTTGATTGGTTTAAAGTTCTATTTTTCCCTTCCATAAATAAAGAGTTTTATAAATTAAATTTCATTCATACTCATCCACACAGACGACAGAAGTTATGGGTCATCATATGTTGTCGTGATATGCTTAAAAAATGTTGTCATCATTTCATTATTATTTTAACTTGTAAATTAAATATTCTTCATAATACTTACTTGACTAGTTTTCAGTTGGCTCCACTTGTTTTCTCTGCCCATCATTATTTCTCTAATCAAAGTTTTTTTTTTCTTTTTTAAAAGAGGATTGTTATATATGATTAAATTTACCAATTAACTTTTTAGATTTGGTGCTAAGCATTCGAACATTTATAATCTCATTTTCTCTGCGCTTAATATTTGATAAATATTTGATAAGATTTCTAGCCCTTCAGCTTAAGGGAGGGAGTAATGTAAAATTAAGGGAGGGAGTAATGTAAAATTAAATTTATTGCTGTATCTTAAGATTTTGTGTTTAGTGGTGACTTGCCAAAGTTATTAGGAAGGAAGACTATCACAAACGTGAGAACTAAGCATGATTTGTTGTTTTACTAAGTTCTAACTAGTAAAAAATCTAAACTTTTTTTTTAAAAAAAAAATTATGTAAAAATTTCTCACTTCAGGCATCATTCTGCTGTATGATGATTTGCTCCAGTAGAGTAGAATTTGCCTCTCTGATGTGAAAATGGAAAAAGTAAATCATGATTTGCTCCATTTTGTTTCCATCTATGGTTGCCAGCTTGATCTTCTCTTGTGCAGACTGCAGTCATTCAAAATGGGCTATGACTGACTTTTAATCTTCTTTGCTTATTCATTTCTGATATCTCTACATTTCATCCTTTTGTTAGTGAGAATGTAATATGTTTCTATCTTACTTGCTCTGAACCTAACAGCTTTCTTTTTCGTATAGAGCTGCCTTAATGATCTCAATAGTCAGTGGCAACAGCCCGATAAAGATGCCATTCAATACTTCACGCTCGGCGAGCTGTGGGATTACTACGATGAGTGGAGTGCATATGGTGCTGGGATCCCGATACAGTTGAATGGTTCGGAAACTGCTACGCAGTTCTACGTGCCGTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCTCCTTCCAGGTATACAGAAACAACTTTCATTTTATGTTGCTGCCTTTGAAGTTGGAAGACTCTGTTTCTCTTTGAAAAATGGTTGTTTACAATCTTCATTAAGATTAGTATTGGTTTTAAAGGGAAATTTTTTATATGCAATTTAGTTGTCATTGCATTGCATTGCACCTAAGCTTACATTTGTTCGATTCCTCTTTGTAGAAACCGAAGATATGATAGTGACATGGCAGAATGTGAAAGTGATTCTTGGAGCGATGATAGCTGGAGCGATAACCTGTCAAGATCCCTGAGCAACAACTCCAGCAGAACATGGGATGCGGTTTCTGAAGATTCGAGCTTCGACCAGGAGGGATCATGGCCGCTGAGGGAAAAGCTTGGATACCTCTCTTTACAGTATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTCATGGACAAGGTAGATCTTTAGTCTATTGTTTTAAATAGATCTCCATTATTGTTGATGTTACAAAAGGAATTTCTCATAATGTTTTCAAATTTAACAGTTCTACAGTTGTTGTTGGTAAGCGTTGGATAGAAGATCTTAAGAAAGTTTTGATATTCAAATGAAAAGATTAGGTGGAATTATACATAGAGCATAGAAGAAATGTAATATGATATTATCAAAATCTTCTTCCTTGCTTATGTTGGACAATCTTCATTTCAGATAACAGAGCTATCTCAAACTTATCCTGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCTTGGTAAAAATCGCCTTCCTCTATCAACCGATTTACGCAAGAGCTTCTTTGCTGTTGTTTCTTTTATTCTCCTCTCTTCATGTTTCCTTTTAGTAGTTTTTTCTTTACCGTTTTCAACTTGATTCAGGTACCCTATTTATCATATCCCTAGTCAGAAAAACGACAAAGACTTTGCGACGTGCTTTCTAACCTATCATACATTGTCTTCATCTTTCCAAGGTGTGGGACAGTCTATACTTCTTTCCAGAATTGTAAGAAACCTTTATCTGTCTATAATACTTAAGATCAATGTTTGATTGATGACTGCAGATTGCTCTATGGATCATGAAGGGCAAGATGGATGTAGTAGTTCCGGATCTGATACCGGGGGTCAAACCGATGACAAAACTAGTACTTCTACTTCTACTTGCCTTTACCCATTTGGGCTGGCCACTTATAGAATGCAGGGAGATCTTTGGTTGAAGCCAGAGACGTCTGATTACGAACGAATCGTTGATCTCTATCATGCTGCCGATTCATGGTTGAAGCAGCTCGGCGTCCATCACCACGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAAATAATCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCATTTCTTAGGCTGCCTCACTGTCTCCTTCATGCAGGTTGTATGTTTGTGTTCATGGTTTTGCAACCAACATGAGAAACTCTTTACCTTTTTTGCCTCTGCCCCCTGCAGTTAGGGGTTTGATTCAAAACCAGCCCTTTTGTAGTTTTTAACTCAGGAAAAATGATGAACATTGTTGTGGTTTTAAAAGCAGAGGCATCTCCCACTGAGTTTTGGTGGAGTTCTTTTTTTTTCTTTTTCTTTTTTTCTTTTTGGATTCAGGCTTCACTTTTTCTCTCCCCACTCTGTGTTATGA AAAAAAAAAAGGAGAAATTCTCAGTCAAAATTTCTGCTCGAAATCCAGCGTTATCCTCAACTCCTCGTCTTCTTCATCTCTGGATCGCCTTCTTCTTCTTATAAATCTTCAATGGCTTCTTTCTTCTACCATTTCGGAAATCTACTGAAAGAGAAATGACTGAAGGATTGATTGCTAATTAAGAGCCGGATTCCTCGATCAGGTGCTTCTTTCATTCTTCTATATATTCAAATCAACTAATTCGTCCGAGACCACCGGAAAACTCACATTCTTCCAAAAACCTAGCCGGAATTCCGATCGGAGAAGACGATAAGAAAGAGAAATCAATGGCTCAAACGGCGTCGTTTAGTTCCGGTAACCATAAAACTTCTTCCAATTTGGAGCGCTTTCTTCAATGCGTTACTCCTTGTGTTCCTTGGCGAACTCTTCCTCGGAGCTGCCTTAATGATCTCAATAGTCAGTGGCAACAGCCCGATAAAGATGCCATTCAATACTTCACGCTCGGCGAGCTGTGGGATTACTACGATGAGTGGAGTGCATATGGTGCTGGGATCCCGATACAGTTGAATGGTTCGGAAACTGCTACGCAGTTCTACGTGCCGTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCTCCTTCCAGAAACCGAAGATATGATAGTGACATGGCAGAATGTGAAAGTGATTCTTGGAGCGATGATAGCTGGAGCGATAACCTGTCAAGATCCCTGAGCAACAACTCCAGCAGAACATGGGATGCGGTTTCTGAAGATTCGAGCTTCGACCAGGAGGGATCATGGCCGCTGAGGGAAAAGCTTGGATACCTCTCTTTACAGTATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTCATGGACAAGATCTCCATTATTGTTGATGTTACAAAAGGAATTTCTCATAATGTTTTCAAATTTAACAGTTCTACAGTTGTTGTTGGTAAGCGTTGGATAGAAGATCTTAAGAAAATAACAGAGCTATCTCAAACTTATCCTGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCTTGGTACCCTATTTATCATATCCCTAGTCAGAAAAACGACAAAGACTTTGCGACGTGCTTTCTAACCTATCATACATTGTCTTCATCTTTCCAAGATTGCTCTATGGATCATGAAGGGCAAGATGGATGTAGTAGTTCCGGATCTGATACCGGGGGTCAAACCGATGACAAAACTAGTACTTCTACTTCTACTTGCCTTTACCCATTTGGGCTGGCCACTTATAGAATGCAGGGAGATCTTTGGTTGAAGCCAGAGACGTCTGATTACGAACGAATCGTTGATCTCTATCATGCTGCCGATTCATGGTTGAAGCAGCTCGGCGTCCATCACCACGACTTCAACTTCTTTTCCCTTCACTCAACCTTGCTTCACTTTTTCTCTCCCCACTCTGTGTTATGA ATGGCTCAAACGGCGTCGTTTAGTTCCGGTAACCATAAAACTTCTTCCAATTTGGAGCGCTTTCTTCAATGCGTTACTCCTTGTGTTCCTTGGCGAACTCTTCCTCGGAGCTGCCTTAATGATCTCAATAGTCAGTGGCAACAGCCCGATAAAGATGCCATTCAATACTTCACGCTCGGCGAGCTGTGGGATTACTACGATGAGTGGAGTGCATATGGTGCTGGGATCCCGATACAGTTGAATGGTTCGGAAACTGCTACGCAGTTCTACGTGCCGTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCTCCTTCCAGAAACCGAAGATATGATAGTGACATGGCAGAATGTGAAAGTGATTCTTGGAGCGATGATAGCTGGAGCGATAACCTGTCAAGATCCCTGAGCAACAACTCCAGCAGAACATGGGATGCGGTTTCTGAAGATTCGAGCTTCGACCAGGAGGGATCATGGCCGCTGAGGGAAAAGCTTGGATACCTCTCTTTACAGTATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTCATGGACAAGATCTCCATTATTGTTGATGTTACAAAAGGAATTTCTCATAATGTTTTCAAATTTAACAGTTCTACAGTTGTTGTTGGTAAGCGTTGGATAGAAGATCTTAAGAAAATAACAGAGCTATCTCAAACTTATCCTGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCTTGGTACCCTATTTATCATATCCCTAGTCAGAAAAACGACAAAGACTTTGCGACGTGCTTTCTAACCTATCATACATTGTCTTCATCTTTCCAAGATTGCTCTATGGATCATGAAGGGCAAGATGGATGTAGTAGTTCCGGATCTGATACCGGGGGTCAAACCGATGACAAAACTAGTACTTCTACTTCTACTTGCCTTTACCCATTTGGGCTGGCCACTTATAGAATGCAGGGAGATCTTTGGTTGAAGCCAGAGACGTCTGATTACGAACGAATCGTTGATCTCTATCATGCTGCCGATTCATGGTTGAAGCAGCTCGGCGTCCATCACCACGACTTCAACTTCTTTTCCCTTCACTCAACCTTGCTTCACTTTTTCTCTCCCCACTCTGTGTTATGA MAQTASFSSGNHKTSSNLERFLQCVTPCVPWRTLPRSCLNDLNSQWQQPDKDAIQYFTLGELWDYYDEWSAYGAGIPIQLNGSETATQFYVPYLSAIQIYTSKPVAPSRNRRYDSDMAECESDSWSDDSWSDNLSRSLSNNSSRTWDAVSEDSSFDQEGSWPLREKLGYLSLQYMEMSSPYWRVPFMDKISIIVDVTKGISHNVFKFNSSTVVVGKRWIEDLKKITELSQTYPALTTLRSVDLSPASWMAVSWYPIYHIPSQKNDKDFATCFLTYHTLSSSFQDCSMDHEGQDGCSSSGSDTGGQTDDKTSTSTSTCLYPFGLATYRMQGDLWLKPETSDYERIVDLYHAADSWLKQLGVHHHDFNFFSLHSTLLHFFSPHSVL Homology
BLAST of Clc01G14490 vs. NCBI nr
Match: XP_038895490.1 (uncharacterized protein LOC120083714 isoform X1 [Benincasa hispida]) HSP 1 Score: 647.5 bits (1669), Expect = 7.2e-182 Identity = 318/374 (85.03%), Postives = 327/374 (87.43%), Query Frame = 0
BLAST of Clc01G14490 vs. NCBI nr
Match: XP_008437273.1 (PREDICTED: uncharacterized protein LOC103482746 [Cucumis melo] >TYJ99085.1 uncharacterized protein E5676_scaffold248G002890 [Cucumis melo var. makuwa]) HSP 1 Score: 635.6 bits (1638), Expect = 2.8e-178 Identity = 313/374 (83.69%), Postives = 323/374 (86.36%), Query Frame = 0
BLAST of Clc01G14490 vs. NCBI nr
Match: XP_004137643.2 (uncharacterized protein LOC101213420 [Cucumis sativus] >KGN64231.1 hypothetical protein Csa_014014 [Cucumis sativus]) HSP 1 Score: 635.2 bits (1637), Expect = 3.7e-178 Identity = 312/374 (83.42%), Postives = 322/374 (86.10%), Query Frame = 0
BLAST of Clc01G14490 vs. NCBI nr
Match: KAG6584275.1 (hypothetical protein SDJN03_20207, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 613.2 bits (1580), Expect = 1.5e-171 Identity = 306/374 (81.82%), Postives = 316/374 (84.49%), Query Frame = 0
BLAST of Clc01G14490 vs. NCBI nr
Match: XP_022955129.1 (uncharacterized protein LOC111457189 isoform X1 [Cucurbita moschata]) HSP 1 Score: 612.8 bits (1579), Expect = 2.0e-171 Identity = 302/378 (79.89%), Postives = 318/378 (84.13%), Query Frame = 0
BLAST of Clc01G14490 vs. ExPASy TrEMBL
Match: A0A5D3BL53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002890 PE=4 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 1.4e-178 Identity = 313/374 (83.69%), Postives = 323/374 (86.36%), Query Frame = 0
BLAST of Clc01G14490 vs. ExPASy TrEMBL
Match: A0A1S3ATR9 (uncharacterized protein LOC103482746 OS=Cucumis melo OX=3656 GN=LOC103482746 PE=4 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 1.4e-178 Identity = 313/374 (83.69%), Postives = 323/374 (86.36%), Query Frame = 0
BLAST of Clc01G14490 vs. ExPASy TrEMBL
Match: A0A0A0LW14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044320 PE=4 SV=1) HSP 1 Score: 635.2 bits (1637), Expect = 1.8e-178 Identity = 312/374 (83.42%), Postives = 322/374 (86.10%), Query Frame = 0
BLAST of Clc01G14490 vs. ExPASy TrEMBL
Match: A0A6J1GV34 (uncharacterized protein LOC111457189 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457189 PE=4 SV=1) HSP 1 Score: 612.8 bits (1579), Expect = 9.5e-172 Identity = 302/378 (79.89%), Postives = 318/378 (84.13%), Query Frame = 0
BLAST of Clc01G14490 vs. ExPASy TrEMBL
Match: A0A6J1KKF0 (uncharacterized protein LOC111495384 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495384 PE=4 SV=1) HSP 1 Score: 610.1 bits (1572), Expect = 6.2e-171 Identity = 305/374 (81.55%), Postives = 315/374 (84.22%), Query Frame = 0
BLAST of Clc01G14490 vs. TAIR 10
Match: AT1G17830.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 312.0 bits (798), Expect = 6.7e-85 Identity = 178/370 (48.11%), Postives = 231/370 (62.43%), Query Frame = 0
BLAST of Clc01G14490 vs. TAIR 10
Match: AT1G73210.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 288.9 bits (738), Expect = 6.1e-78 Identity = 171/361 (47.37%), Postives = 219/361 (60.66%), Query Frame = 0
BLAST of Clc01G14490 vs. TAIR 10
Match: AT4G03420.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 288.9 bits (738), Expect = 6.1e-78 Identity = 162/357 (45.38%), Postives = 209/357 (58.54%), Query Frame = 0
BLAST of Clc01G14490 vs. TAIR 10
Match: AT1G73210.2 (Protein of unknown function (DUF789) ) HSP 1 Score: 287.0 bits (733), Expect = 2.3e-77 Identity = 170/361 (47.09%), Postives = 218/361 (60.39%), Query Frame = 0
BLAST of Clc01G14490 vs. TAIR 10
Match: AT1G03610.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 281.6 bits (719), Expect = 9.7e-76 Identity = 158/353 (44.76%), Postives = 202/353 (57.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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