Clc01G13850 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G13850
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal RNA small subunit methyltransferase G
LocationClcChr01: 26741846 .. 26745213 (+)
RNA-Seq ExpressionClc01G13850
SyntenyClc01G13850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGATGGCAGTTACAGTCTCGTTCTCTTTTAGGACTTTTATCAAACAGTTTTCGGCTCTTTCAAACCGAACGGCGTTCAATATTCCGATCAGAACCAGATTCAAGCGACTCGCCGTCACCTGCAGTACTCCGAGATGTCTCCATTTCGAAACCCTAACATCCCGCCAAAAAGACCAGGTTCATCTTTTCGTCGACGCTCTTCTTCAATGGAACCAGGTACCTGGTTTCTCTCTTACGCTGGTTTCATTTCCTGAAATTTTATCGCTATTTCTTGTCGTTAGCTTTAATTTGATGGCTGTACGGTTGAATTCTGGTAGAAAATGAATCTTACGGCTGTTGCGGAAGTAAGCGAAGTAATGGAAAGGCACGTCGAGGATTCTCTCGCGATTTTACCGCCAATGCGGAATCTGTACTTGTCGCATTGTTCGACTACTCCATGCGATGACATTAAACTCGTTGATGTTGGAACGGGGGCCGGGCTTCCTGGATTGATTATAGCTATTGCTTGCCCAGGTGAACATAATCGATTACTATGATGATGAAAATGCGTTATGTGTGTCCGGGATTATTCTGTGATATGAGGAATATTGATTGCTTCAATATCCTTTATTTTCTTTTGGGAATTTAACTCTGTCTATTTGGATGAACTAGAATGGCAAGTAACGTTGATGGAGTCTATGAATAAGCGGTGTCTTTTCTTGGAGCATGTTGTGGGTCATACCGGTTTGACAAATGTTCAAGTTGTGCGAGGAAGAGCAGAGGTACGTGGACATTGCGTTTACGCAATTAAACACCCTGGCCTGTTTAGCCATTCAAGTTTGATTCTCTTGTCTTGATTAGTTCACATACCTGGTGATTAGTATCGATTTTATTGGTTAATGAACAAAATTTCTTGAATGGTGCCTTTCTTAAAAAATGTGGAAGTGGCTCGTTGTTTGCTTATGGTAAAGAGATTTGCATGCTCAAGGGTAGAGCTGGCAGCAGTCTCGATTTCATCATTATATTCATTGTATTATGAATACTTGAAGAAGTTATAAGTTATTGATGAGGGTTACCCTTGAGACCAATTTTTATTTTATACTAGGGTAATTGCAATAGATAGCACTTTTAGGGTTAATAATTAAGTATATAACAACATTTTGAAAGAATTGCAAATATAGCAAAATCTATCAGTGATAGACTCTTGCTGATAGACTTCTTTTGCATTGTGTTATATTTGTTAACACTTTGGATCTAGTTGCTATATTTGCAACTACCTCTTTATATTATGTATTATTATCTTTTGAGAGAGAAGGGGAAGAACACCTGCTCACAGCTCATGTCTCCAAACTTTCTCTGTTTAATAGTTAATGTGGCAGTGATATATCCTGATGTAGGGCAGAATTTGGGACATGATCCTTGCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAGTTTTAGGTACCTTCTAAATTCGATATATATTACTTCTACCAATCTTCAAAACATTTGTGGTTTTGCTTACAATTTTTCTTTGATATCTCTTCTTTCAGCTGAATATTGTCTTCCCATGGTTCGTGTTGGTGGCTTGTTTTTAGCTGCCAAGGGTCATGATCCTCTTGTATGTTCTCTATCCATTAACATTATGAACGTCTACTCTCTGATTGCATTGTTCTATTTTATTGGGAGTCTGGGACTGTATGCACGTCAGTACCACCATTGATATTGTTATTGCTTTTTTGAGGTAGAGGTATTTGATGTGAAAATCCCCATTCCACTTTAATTATTTGCAGTTTCTTGTTTTATTTTCCATCTTTGAAAGTAATCCTTTACAAATTATAATGCACAATAGGAAATTAATTTTTATATGGTCAAAAAATATTGTAATGAATGATATAAATATAAAGATATTGTGGTTGCGGATAGGTGGTAATTGTATATTTCTTACTACCATTTAAGTAGACTCCTCTTGATTTAGGTCAGACCTCTTGTATACTTCGTGACAATGGTGCTACGGAGAATCTTGTTTCTAATTATGGAGATTTCCTTGAACTGAATTAATTTAGAATTGTTGAGAAATTTTATTTGCTTAATTGGTATTCCTTTGGATTTTAATTTTAAATAATCTTGTTGATTTTTAGTTTGTTTATTTTTTTGTTGCATGACTTATGCTAGAATTTTTCATTTGACAGGCAGAAGTCACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCCTCCTTACTGCAAATATGCCCTGGTGTGTTTGCCTTTCTTTTGGTCTTCCTGCAATGTCATAATCTCCTGTGTACAGTAATGAAGTCAACAGATTTGTGTGTCCTTGAGGATTGCTCTATAGTACAGAGGTTTCCTCCTGAAAAGACACTCCCACTTTAAGCCCGTAGCCAGTTGGTTTTCTAGATACTTCTACTTAGTTACTCCAATGTGTACTTGAACTACAAGAAATTTTCTGACGCTGGCAATTTCTGCTACAATAATATCTATATGCACTCGATGTAAAAACTATAGGATTTGCCCGTTAGATATTTGGAATTTTCACCCATTCCAGTGAATTTTGTCAAACTTATTTTATTTATTGGCTTATGTTCATCTAATTTGCATGCAGAACTTCCTAAATTGTAGTATTCTTGTGGATTGATTTAGAATTACTTTCTCAACTAATCATACTGGATAATTTTATTTTTAGTTTGATCCATGAAGTATTTCCAACTTATGCTTTTGCACAAAATTTACCCTCCTCTCTTTATGATGTAATTATGTAAATATTGTCTGATGATCCATTTTTTACTTACGCAGTGGAATCACATAGTCCATATGGGCAGCGAACTGCCGTTGTTTGTTTAAAAGAACGGCACACGCCAAGGAAGTATCCTCGTGATCCAGGTACACCAGCGAAAGCCCCATTATAGCTCCTCTCTGGACATTCAGTTTAGTTTCAATTTCGTGTGTTCTTCACGACACAAACCAGTTGTTTAGTATGCGAGATGTTTCAAGAATCTGAGTCTGCGAGTATCACCTGAAGATAGGCACCTTGTTATTTGGTGAAAATCCTTCTCTTTTGCTGTTTTGCTTATCTATTTTTTTTTATCTAATTTAATTTTATATATAGTGAGTCCACATAATTGGTAATTCAGGTATTAGAAATTTATCTGTCGCGTTGTTGTCTTTCCTTTAAAAACTTATATGTACTTTTGCAGTTCAACTTAAAAGTGGCTATTTTGTCAGTTATACTGCCACTATTGACAATATATGTATTTAGCTCTTGTAAAACTACAGGGGCCTTCAAGGTCATTGGTTCGTCATGGGCTTTACAGGTTGATAAATCTAGTACAACATTTACTTTTTAG

mRNA sequence

GGAAGATGGCAGTTACAGTCTCGTTCTCTTTTAGGACTTTTATCAAACAGTTTTCGGCTCTTTCAAACCGAACGGCGTTCAATATTCCGATCAGAACCAGATTCAAGCGACTCGCCGTCACCTGCAGTACTCCGAGATGTCTCCATTTCGAAACCCTAACATCCCGCCAAAAAGACCAGGTTCATCTTTTCGTCGACGCTCTTCTTCAATGGAACCAGAAAATGAATCTTACGGCTGTTGCGGAAGTAAGCGAAGTAATGGAAAGGCACGTCGAGGATTCTCTCGCGATTTTACCGCCAATGCGGAATCTGTACTTGTCGCATTGTTCGACTACTCCATGCGATGACATTAAACTCGTTGATGTTGGAACGGGGGCCGGGCTTCCTGGATTGATTATAGCTATTGCTTGCCCAGAATGGCAAGTAACGTTGATGGAGTCTATGAATAAGCGGTGTCTTTTCTTGGAGCATGTTGTGGGTCATACCGGTTTGACAAATGTTCAAGTTGTGCGAGGAAGAGCAGAGGTACGTGGACATTGCGTTTACGCAATTAAACACCCTGGCCTGTTTAGCCATTCAATTAATGTGGCAGTGATATATCCTGATGTAGGGCAGAATTTGGGACATGATCCTTGCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAGTTTTAGCTGAATATTGTCTTCCCATGGTTCGTGTTGGTGGCTTGTTTTTAGCTGCCAAGGGTCATGATCCTCTTGCAGAAGTCACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCCTCCTTACTGCAAATATGCCCTGTGGAATCACATAGTCCATATGGGCAGCGAACTGCCGTTGTTTGTTTAAAAGAACGGCACACGCCAAGGAAGTATCCTCGTGATCCAGGGGCCTTCAAGGTCATTGGTTCGTCATGGGCTTTACAGGTTGATAAATCTAGTACAACATTTACTTTTTAG

Coding sequence (CDS)

ATGGCAGTTACAGTCTCGTTCTCTTTTAGGACTTTTATCAAACAGTTTTCGGCTCTTTCAAACCGAACGGCGTTCAATATTCCGATCAGAACCAGATTCAAGCGACTCGCCGTCACCTGCAGTACTCCGAGATGTCTCCATTTCGAAACCCTAACATCCCGCCAAAAAGACCAGGTTCATCTTTTCGTCGACGCTCTTCTTCAATGGAACCAGAAAATGAATCTTACGGCTGTTGCGGAAGTAAGCGAAGTAATGGAAAGGCACGTCGAGGATTCTCTCGCGATTTTACCGCCAATGCGGAATCTGTACTTGTCGCATTGTTCGACTACTCCATGCGATGACATTAAACTCGTTGATGTTGGAACGGGGGCCGGGCTTCCTGGATTGATTATAGCTATTGCTTGCCCAGAATGGCAAGTAACGTTGATGGAGTCTATGAATAAGCGGTGTCTTTTCTTGGAGCATGTTGTGGGTCATACCGGTTTGACAAATGTTCAAGTTGTGCGAGGAAGAGCAGAGGTACGTGGACATTGCGTTTACGCAATTAAACACCCTGGCCTGTTTAGCCATTCAATTAATGTGGCAGTGATATATCCTGATGTAGGGCAGAATTTGGGACATGATCCTTGCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAGTTTTAGCTGAATATTGTCTTCCCATGGTTCGTGTTGGTGGCTTGTTTTTAGCTGCCAAGGGTCATGATCCTCTTGCAGAAGTCACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCCTCCTTACTGCAAATATGCCCTGTGGAATCACATAGTCCATATGGGCAGCGAACTGCCGTTGTTTGTTTAAAAGAACGGCACACGCCAAGGAAGTATCCTCGTGATCCAGGGGCCTTCAAGGTCATTGGTTCGTCATGGGCTTTACAGGTTGATAAATCTAGTACAACATTTACTTTTTAG

Protein sequence

MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYPRDPGAFKVIGSSWALQVDKSSTTFTF
Homology
[Close]
BLAST of Clc01G13850 vs. NCBI nr
Match: XP_038894980.1 (ribosomal RNA small subunit methyltransferase G [Benincasa hispida])

HSP 1 Score: 501.9 bits (1291), Expect = 4.1e-138
Identity = 256/304 (84.21%), Postives = 260/304 (85.53%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA TVSFS RTFIKQFSALS  TAFN P+RT FKRL VTCST R LHFETLTSRQKDQVH
Sbjct: 1   MATTVSFSLRTFIKQFSALSKPTAFNFPVRTSFKRLNVTCSTTRYLHFETLTSRQKDQVH 60

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTAV EVSEVMERHVEDSLAI+PP+RNLYLSHCST  CDDIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAVTEVSEVMERHVEDSLAIIPPIRNLYLSHCSTISCDDIKLVDV 120

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEWQVTLMESMNKRC+FLEH VGHTGLTNVQVVRGRAE       
Sbjct: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCVFLEHAVGHTGLTNVQVVRGRAE------- 180

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD CLREKFDVVVARAVAEMRVLAEYCLPMVRVG
Sbjct: 181 -----------------------NLGHDLCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP
Sbjct: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 274

Query: 301 RDPG 305
           RDPG
Sbjct: 301 RDPG 274

[Close]
BLAST of Clc01G13850 vs. NCBI nr
Match: XP_031738668.1 (uncharacterized protein LOC101219448 [Cucumis sativus] >KGN64286.1 hypothetical protein Csa_013533 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 5.6e-135
Identity = 248/304 (81.58%), Postives = 258/304 (84.87%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA TVSFS RTFIKQFS L  RT F+ PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 1   MASTVSFSLRTFIKQFSPLPKRTPFSFPIRTSFKRLTVTCNSSRFLHFETLTSRQKDQVH 60

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLY+SHCST+PCDDIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDV 120

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 180

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 181 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 240

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 274

Query: 301 RDPG 305
           RDPG
Sbjct: 301 RDPG 274

[Close]
BLAST of Clc01G13850 vs. NCBI nr
Match: KAA0055205.1 (ribosomal RNA small subunit methyltransferase G isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 488.8 bits (1257), Expect = 3.6e-134
Identity = 248/304 (81.58%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 1   MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 60

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PCDDIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCDDIKLVDV 120

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 121 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 180

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 181 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 240

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 241 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 274

Query: 301 RDPG 305
           RDPG
Sbjct: 301 RDPG 274

[Close]
BLAST of Clc01G13850 vs. NCBI nr
Match: XP_008437991.2 (PREDICTED: ribosomal RNA small subunit methyltransferase G isoform X2 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 1.4e-133
Identity = 247/304 (81.25%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 41  MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 100

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PC+DIKLVDV
Sbjct: 101 LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDV 160

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 161 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 220

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 221 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 280

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 281 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 314

Query: 301 RDPG 305
           RDPG
Sbjct: 341 RDPG 314

[Close]
BLAST of Clc01G13850 vs. NCBI nr
Match: XP_008437984.2 (PREDICTED: ribosomal RNA small subunit methyltransferase G isoform X1 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 1.4e-133
Identity = 247/304 (81.25%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 41  MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 100

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PC+DIKLVDV
Sbjct: 101 LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDV 160

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 161 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 220

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 221 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 280

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 281 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 314

Query: 301 RDPG 305
           RDPG
Sbjct: 341 RDPG 314

[Close]
BLAST of Clc01G13850 vs. ExPASy Swiss-Prot
Match: A8MKR7 (Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus oremlandii (strain OhILAs) OX=350688 GN=rsmG PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-38
Identity = 99/256 (38.67%), Postives = 142/256 (55.47%), Query Frame = 0 

Query: 51  LTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTT 110
           +T  Q +Q+  + D LL+WNQKMNLTA+ E  +VM +H  DSL+ +   ++ YL      
Sbjct: 18  ITDAQINQLIKYKDILLEWNQKMNLTAIEEEKDVMIKHFLDSLSCI---QSKYLKR---- 77

Query: 111 PCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRG 170
              + K++DVGTGAG PG+ + IA P  ++TL++S+ KR  FLE V   T L  V  V G
Sbjct: 78  ---EGKMIDVGTGAGFPGVPLKIALPGIELTLLDSLRKRISFLEEVCAETKLGQVDFVHG 137

Query: 171 RAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLA 230
           RAE                          D+GQ+  +    REK+D  V+RAVA + VL 
Sbjct: 138 RAE--------------------------DIGQSKDY----REKYDYAVSRAVAALNVLV 197

Query: 231 EYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRT--AVV 290
           EYCLP V+VGG F+  KG   + E+ +AEKAI+++G  +++   V+   P+   T   +V
Sbjct: 198 EYCLPFVKVGGYFICQKGPQIIEELPDAEKAIKVLGGEVVEQISVD--LPFSDITHHILV 231

Query: 291 CLKERHTPRKYPRDPG 305
             K + TP KYPR  G
Sbjct: 258 IKKIKQTPSKYPRKAG 231

[Close]
BLAST of Clc01G13850 vs. ExPASy Swiss-Prot
Match: A3DHY6 (Ribosomal RNA small subunit methyltransferase G OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsmG PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-38
Identity = 95/256 (37.11%), Postives = 138/256 (53.91%), Query Frame = 0 

Query: 51  LTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTT 110
           L   Q D+   + D L +WNQKMNLTA+ +  E++ +H  DS++I P +++         
Sbjct: 23  LDDEQIDKFFAYKDVLKEWNQKMNLTAIEDDEEIILKHFIDSISICPIIKD--------- 82

Query: 111 PCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRG 170
              ++ L+DVGTGAG PG+ + I  PE +V L++S+ KR  FL  V+    L ++  V  
Sbjct: 83  --KNLALIDVGTGAGFPGIPVKIVFPELKVKLLDSLEKRTKFLNEVIERLDLKDISTVHA 142

Query: 171 RAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLA 230
           RAE +                              G DP  REK+D+ VARAVA + VL 
Sbjct: 143 RAEEK------------------------------GVDPDYREKYDISVARAVASLPVLL 202

Query: 231 EYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYG--QRTAVV 290
           EYCLP V+VGG F+A KG+    EV N++KA+E++G  +  I  +E + P+   +R  +V
Sbjct: 203 EYCLPFVKVGGCFIAMKGNS-TEEVENSKKALEILGGKIEDI--LEFNLPFSDIKRNVIV 234

Query: 291 CLKERHTPRKYPRDPG 305
             K R TP KYPR  G
Sbjct: 263 IKKFRQTPTKYPRKSG 234

[Close]
BLAST of Clc01G13850 vs. ExPASy Swiss-Prot
Match: C0ZA63 (Ribosomal RNA small subunit methyltransferase G OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=rsmG PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.3e-37
Identity = 91/256 (35.55%), Postives = 133/256 (51.95%), Query Frame = 0 

Query: 50  TLTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCST 109
           +LT RQK+Q   F   L++WN+KMNLT + E  +V  +H  DS           ++    
Sbjct: 16  SLTDRQKEQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDS-----------ITPAFY 75

Query: 110 TPCDDIK-LVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVV 169
            P D ++ +VD+G GAG P + + I  P  ++T+++S+NKR  FL+HV    GL NV  V
Sbjct: 76  FPFDQVQSVVDIGGGAGFPSIPLKICFPHLKMTIIDSLNKRMSFLQHVAKELGLENVNPV 135

Query: 170 RGRAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRV 229
            GRAE R                              G +   REKFD+VVARAVA + +
Sbjct: 136 HGRAEDR------------------------------GQEAMYREKFDLVVARAVARLNL 195

Query: 230 LAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVV 289
           L+E+CLP  +VGG F+A KG +   E+  A+KAI+ +G    ++   +     G+R  V+
Sbjct: 196 LSEFCLPFAKVGGHFVALKGAEITPELAEAKKAIKTLGGKTRKVETFQLLEEAGERNIVI 230

Query: 290 CLKERHTPRKYPRDPG 305
             K   TP+ YPR  G
Sbjct: 256 MEKIEATPKSYPRKAG 230

[Close]
BLAST of Clc01G13850 vs. ExPASy Swiss-Prot
Match: A6TXE3 (Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus metalliredigens (strain QYMF) OX=293826 GN=rsmG PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-36
Identity = 95/256 (37.11%), Postives = 136/256 (53.12%), Query Frame = 0 

Query: 51  LTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTT 110
           +   Q  Q+  + D LL+WN+KMNLTA+ E  EVM +H  DSL+ +   ++ YL    T 
Sbjct: 18  IDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSLSCI---QSQYLKEEGT- 77

Query: 111 PCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRG 170
                 ++DVGTGAG PG+ + +  P+ ++TL++S+NKR  FL+ V    GL +V  V G
Sbjct: 78  ------MIDVGTGAGFPGIPLKVYFPKLKLTLLDSLNKRVEFLKEVSQELGLEDVNFVHG 137

Query: 171 RAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLA 230
           RAE                          + GQ   H    RE++D  VARAVA + VL 
Sbjct: 138 RAE--------------------------ECGQEETH----REQYDYAVARAVASLNVLV 197

Query: 231 EYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRT--AVV 290
           EYCLP V+VGG F+  KG     E+ N++ AI ++G  +++    E   P+   T   +V
Sbjct: 198 EYCLPFVKVGGYFICQKGPQLKEEIQNSQNAITVLGGKVVE--QKEITLPFSDITHSLLV 231

Query: 291 CLKERHTPRKYPRDPG 305
             K + TP KYPR PG
Sbjct: 258 IEKIKQTPTKYPRKPG 231

[Close]
BLAST of Clc01G13850 vs. ExPASy Swiss-Prot
Match: A4J9R9 (Ribosomal RNA small subunit methyltransferase G OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=rsmG PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-36
Identity = 96/254 (37.80%), Postives = 132/254 (51.97%), Query Frame = 0 

Query: 51  LTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTT 110
           LT  Q      + + L++WN+ +NLTA+ E  EV  +H  DSL  L  +           
Sbjct: 19  LTENQTLAFEKYYNLLIEWNKNINLTAIIEPKEVALKHFIDSLTCLKILE---------I 78

Query: 111 PCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRG 170
           PC    ++D+GTGAG PG+ I I  P+  VTLM+S+NKR  FL  V+   GLTN+  +  
Sbjct: 79  PC-QANVLDIGTGAGFPGIPIKIFRPDINVTLMDSLNKRVNFLNEVIKKLGLTNICAIHD 138

Query: 171 RAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLA 230
           RAE                          D GQ   H    REK+D V++RAVA+++VL+
Sbjct: 139 RAE--------------------------DFGQKKEH----REKYDYVLSRAVAKLKVLS 198

Query: 231 EYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCL 290
           EYCLP  ++ G F++ KG D   EV  A KAIE++G SLL I  ++       R+ VV  
Sbjct: 199 EYCLPCTKLDGYFISQKGPDIDEEVKEASKAIEVLGGSLLNIHKLQLPFINDGRSLVVIK 232

Query: 291 KERHTPRKYPRDPG 305
           K + TP  YPR  G
Sbjct: 259 KVKQTPSVYPRKAG 232

[Close]
BLAST of Clc01G13850 vs. ExPASy TrEMBL
Match: A0A0A0LW74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045840 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.7e-135
Identity = 248/304 (81.58%), Postives = 258/304 (84.87%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA TVSFS RTFIKQFS L  RT F+ PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 1   MASTVSFSLRTFIKQFSPLPKRTPFSFPIRTSFKRLTVTCNSSRFLHFETLTSRQKDQVH 60

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLY+SHCST+PCDDIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDV 120

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 180

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 181 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 240

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 274

Query: 301 RDPG 305
           RDPG
Sbjct: 301 RDPG 274

[Close]
BLAST of Clc01G13850 vs. ExPASy TrEMBL
Match: A0A5A7UNI8 (Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00460 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.8e-134
Identity = 248/304 (81.58%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 1   MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 60

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PCDDIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCDDIKLVDV 120

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 121 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 180

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 181 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 240

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 241 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 274

Query: 301 RDPG 305
           RDPG
Sbjct: 301 RDPG 274

[Close]
BLAST of Clc01G13850 vs. ExPASy TrEMBL
Match: A0A5D3BLB2 (Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003410 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.7e-134
Identity = 247/304 (81.25%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 1   MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 60

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PC+DIKLVDV
Sbjct: 61  LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDV 120

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 121 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 180

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 181 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 240

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 241 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 274

Query: 301 RDPG 305
           RDPG
Sbjct: 301 RDPG 274

[Close]
BLAST of Clc01G13850 vs. ExPASy TrEMBL
Match: A0A1S3AV93 (ribosomal RNA small subunit methyltransferase G isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483237 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.7e-134
Identity = 247/304 (81.25%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 41  MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 100

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PC+DIKLVDV
Sbjct: 101 LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDV 160

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 161 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 220

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 221 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 280

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 281 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 314

Query: 301 RDPG 305
           RDPG
Sbjct: 341 RDPG 314

[Close]
BLAST of Clc01G13850 vs. ExPASy TrEMBL
Match: A0A1S3AVW1 (ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483237 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.7e-134
Identity = 247/304 (81.25%), Postives = 256/304 (84.21%), Query Frame = 0 

Query: 1   MAVTVSFSFRTFIKQFSALSNRTAFNIPIRTRFKRLAVTCSTPRCLHFETLTSRQKDQVH 60
           MA T+SFS RTFIKQFS LS RT FN PIRT FKRL VTC++ R LHFETLTSRQKDQVH
Sbjct: 41  MASTLSFSLRTFIKQFSPLSKRTRFNFPIRTSFKRLNVTCNSSRFLHFETLTSRQKDQVH 100

Query: 61  LFVDALLQWNQKMNLTAVAEVSEVMERHVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDV 120
           LFVDALLQWNQKMNLTA+ EV+EVMERHVEDSLAI+PP+RNLYLSHCST PC+DIKLVDV
Sbjct: 101 LFVDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYLSHCSTIPCNDIKLVDV 160

Query: 121 GTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVY 180
           GTGAGLPGLIIAIACPEW VTLMESMNKRCLFLEH VGHTGLTNVQVVRGRAE       
Sbjct: 161 GTGAGLPGLIIAIACPEWHVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAE------- 220

Query: 181 AIKHPGLFSHSINVAVIYPDVGQNLGHDPCLREKFDVVVARAVAEMRVLAEYCLPMVRVG 240
                                  NLGHD  LREKFDVVVARAVAEMR+LAEYCLPMVRVG
Sbjct: 221 -----------------------NLGHDLSLREKFDVVVARAVAEMRILAEYCLPMVRVG 280

Query: 241 GLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQRTAVVCLKERHTPRKYP 300
           GLFLAAKGHDPLAEVTNA KAIEMMGASLLQICPVESHSPYGQRTAVVC KERHTPRKYP
Sbjct: 281 GLFLAAKGHDPLAEVTNAGKAIEMMGASLLQICPVESHSPYGQRTAVVCFKERHTPRKYP 314

Query: 301 RDPG 305
           RDPG
Sbjct: 341 RDPG 314

[Close]
BLAST of Clc01G13850 vs. TAIR 10
Match: AT5G50110.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 324.7 bits (831), Expect = 8.5e-89
Identity = 165/277 (59.57%), Postives = 199/277 (71.84%), Query Frame = 0 

Query: 30  RTRFKRL--AVTCSTPRCLHFETLTSRQKDQVHLFVDALLQWNQKMNLTAVAEVSEVMER 89
           R  +K L  A   +T  C  F+TL+S Q+DQ+HL+VD LLQWNQKMNLTA  E  EVMER
Sbjct: 42  RFHYKALSNATVSTTASC--FKTLSSSQQDQIHLYVDTLLQWNQKMNLTATKEADEVMER 101

Query: 90  HVEDSLAILPPMRNLYLSHCSTTPCDDIKLVDVGTGAGLPGLIIAIACPEWQVTLMESMN 149
           H+EDSLAILPP++  Y  H S+   D I L+DVG+GAGLPGL++AIACP+W+VTL+ES+N
Sbjct: 102 HIEDSLAILPPIKTCYNLH-SSDLFDHINLIDVGSGAGLPGLVLAIACPDWRVTLLESIN 161

Query: 150 KRCLFLEHVVGHTGLTNVQVVRGRAEVRGHCVYAIKHPGLFSHSINVAVIYPDVGQNLGH 209
           KRC+FLEHVV  TGLTNV +VRGRAE                              + GH
Sbjct: 162 KRCVFLEHVVNVTGLTNVTIVRGRAE------------------------------SCGH 221

Query: 210 DPCLREKFDVVVARAVAEMRVLAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGA 269
           D   REKFDV +ARAVAEMRVLAEYCLP+VR+GGLF+AAKGHDP  EV NAE A+ ++G 
Sbjct: 222 DVMYREKFDVAIARAVAEMRVLAEYCLPLVRIGGLFVAAKGHDPKEEVQNAENAVRLLGG 281

Query: 270 SLLQICPVESHSPYGQRTAVVCLKERHTPRKYPRDPG 305
           S+LQI PV+SHSPYGQRT VVC K+  TP+KYPR+ G
Sbjct: 282 SILQISPVDSHSPYGQRTTVVCRKDHSTPQKYPREAG 285

The following BLAST results are available for this feature:
BLAST of Clc01G13850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894980.14.1e-13884.21ribosomal RNA small subunit methyltransferase G [Benincasa hispida][more]
XP_031738668.15.6e-13581.58uncharacterized protein LOC101219448 [Cucumis sativus] >KGN64286.1 hypothetical ... [more]
KAA0055205.13.6e-13481.58ribosomal RNA small subunit methyltransferase G isoform X2 [Cucumis melo var. ma... [more]
XP_008437991.21.4e-13381.25PREDICTED: ribosomal RNA small subunit methyltransferase G isoform X2 [Cucumis m... [more]
XP_008437984.21.4e-13381.25PREDICTED: ribosomal RNA small subunit methyltransferase G isoform X1 [Cucumis m... [more]
BLAST of Clc01G13850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A8MKR73.0e-3838.67Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus oremlandii (stra... [more]
A3DHY63.0e-3837.11Ribosomal RNA small subunit methyltransferase G OS=Hungateiclostridium thermocel... [more]
C0ZA633.3e-3735.55Ribosomal RNA small subunit methyltransferase G OS=Brevibacillus brevis (strain ... [more]
A6TXE32.8e-3637.11Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus metalliredigens ... [more]
A4J9R92.8e-3637.80Ribosomal RNA small subunit methyltransferase G OS=Desulfotomaculum reducens (st... [more]
BLAST of Clc01G13850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW742.7e-13581.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045840 PE=3 SV=1[more]
A0A5A7UNI81.8e-13481.58Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. ... [more]
A0A5D3BLB26.7e-13481.25Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. ... [more]
A0A1S3AV936.7e-13481.25ribosomal RNA small subunit methyltransferase G isoform X1 OS=Cucumis melo OX=36... [more]
A0A1S3AVW16.7e-13481.25ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo OX=36... [more]
BLAST of Clc01G13850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G50110.18.5e-8959.57S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003682rRNA small subunit methyltransferase GPFAMPF02527GidBcoord: 56..174
e-value: 2.1E-31
score: 108.7
coord: 211..272
e-value: 2.0E-11
score: 43.6
IPR003682rRNA small subunit methyltransferase GTIGRFAMTIGR00138TIGR00138coord: 61..174
e-value: 8.9E-31
score: 104.9
IPR003682rRNA small subunit methyltransferase GPANTHERPTHR31760S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEINcoord: 4..305
IPR003682rRNA small subunit methyltransferase GHAMAPMF_0007416SrRNA_methyltr_Gcoord: 48..288
score: 25.475721
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 41..308
e-value: 1.6E-75
score: 255.4
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 45..304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G13850.2Clc01G13850.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031167 rRNA methylation
biological_process GO:0006364 rRNA processing
cellular_component GO:0005737 cytoplasm
molecular_function GO:0008649 rRNA methyltransferase activity