Clc01G13750 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G13750
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUbiquitin-conjugating enzyme, E2
LocationClcChr01: 26627792 .. 26638945 (-)
RNA-Seq ExpressionClc01G13750
SyntenyClc01G13750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTAGCAGATTTGATGGCTAATTCCAGCTCCTCTTGCCATCATAATGTGGCTGCGTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGGAAAGTTCAGAAGCTTCGGTGGGTGGTGCCCGGTGGTCGAGGGTTGCGACAGGAACATCTCTTCGCCAAAACAGCTCATTATATATTGCATTTGAGATTGAAAGTTTGTGCTCTTGAAACTGTTCTCAAATTGCAGGAAGAGGCTTGACAAATGAGTCATATTATGATTTTTCTCATCTTCAACTATGAGGCTCTTCTTTGTTATATAAATTTGTTTATTTTTCTTTAATTTTGTTTCCTGTGGATCTGGTTGACATTGTGGAGTGTCTATTGTATATTTGTGTTGGTAAATATGTATACGAGTTGAGCATCTTTAAGCTTACAGTTGGGTTCAAGGATCTCCCTTCCTTACTATTAGAATTTCGATCTTTGTTTGTATAATTGTTGTACTAAAGGGAATATCTATGAAGTAGTGTAGATGCTAAAGGGAATATCTACGAAGTAACTGAGCTTAGATGCAACAAATTAGCAGTGATTGTCAGTGTTCAATCATGAAAATTTTTAAATATGCTTCTATTGACTAAAAATATCTATTACCACTTTTTAATTTTTTTTAACCAAATGCAAAGAAAACATTTTTAGTTCTCCATATGATTTTTTATCTTTAAAATCACTTTTTACCTTTCTATAAGCACTTTTAATTATTTTTTAACCCTCTTAATTGGATGATCATGTACGTCCCTTAATAAAGATTCTTAAAAATTTATAAGAACTTAAATTCAAGTTGAGTAAGGGAGATTTTGTATCTCAAATTCGAGTAGTGGAAATACATATGAAGGTATAATAATCCGTCAACTCAAATATTAGTTCATTTTGTTTATGCATAAGTTTTTTAAATAAGAGGCTCAAGTCCATTTATCTTAAAAGAGTGTCATCTATTATCTAAACAACAGACAGAGAAGTTAATTTTTAATATTGTAGAAGTGTCATATTCACTTTTAAAAATATATTAACATGACAAACAATAAATGAAATTTCATATAGTCTAAAGATTAGGTGTCACTTAGTTTTGAGTGAATTTACTTCTAAAGAATGTATTTAATATCAAATTATTTAATAAAAAAGAAGGAAAAGATAAACTAAAACTTGTTTAATAAAAGAGAAGGAAGGAAAAGATAAAATAAAAATTGTTAATATTTATGGCCAATAATACTTGGGCAATTGGAACAAACGTGGCTACAATTTTGGCGTCTTTGTGTTTACCTATTTCTTTAATATGTTTGGGGTTTGACTCATTTTTCTACTAAATTATCGCTGAAAAAAGTACTAATAAGCTATCTATGTGACGTTGTACATTTTCAGTTTTTTTTTTTTTTTTAAATAATTATCCTAAATTATTTGGTGAGTTGTTTGAATTTTGAGGCTTAATTGGATTATTTTGAAAAAACAATTCAATTTAAAGTAATTGTGATAAAATATTTGAATTTAATTCAATCAGTGGAAAAATTGAATTCATTTGTGGTAAATTTAAAAATTGGATTTAACTAATTGGGTGAGATTTAATTTAAAAAAAATAGGATAAATTGGAATTGAATTTAAGTTGAGAAATTGATTTGTTAGGAGATGTGTTAAATAAATTGTTAGGTGATGGTTGGAAAAGATTTGATTTGATGGGTTGAGTAAAATTATATTAAATAGCTTGTATTTTATTTTGGAAAAGAAAAAGGAAAAGAGAATTTAAAGAAGTATATATATAAAGTCAATTTCAAATTTTTGGTTCGGCGTATGCAAGTCTATCGCGCAGCTGATTCTGCTTCGCTGGTATCATCCGTTCTTGGTGGGTTACACCAGAATTTGAACATTTGGTTAGTCCAATTGTTGGGTTTTCTTGTAATTTCGTGATTATACATCGATGTTGTTTTGATTGTTGTTACCCATCGGATTTGAGTTTTAGATTCAAACTTCAAAGGATTTTGTACAAGCTAATTAAGTCTGGATTTATGTTCTAGGGTTTTAATTTAAGGATTTTGTAAGAATTGGTGGCTTGGTTAGCTATTTGCATCCAGTGTCAAGGTATGTAATTTTACTATTGGAACCGCCTACGTGCCAAGACAATTTAGTTATTAAAATGTTGTTGGCTTCTTTTAGCCATCTATGAAATATTCTGTTTGCATGTAATTCTTATGACTGCATATATGAGCATGATGATGTTTGTATGAGAGACATTATGAATATATGTTGTGGGATTTTTATGTATGTTACCAGTTATGCATGTTAGTGATAGTTATCCTCCTACGTTGGTTGTGTGTCCACTAGAGTATTTGTGTTCCTTCGACATCACCAGAGATTTTGTGTTCTTTCGAGATCACTAGAGATTTTGTTTTCCTTTGATTTCACCAGAGGCTTTGTGTTTCTTCAAGATCACCAGAGGTTTCGTGTTCCTTTGGGATACACTTGAGCTAAGTGTCTCCTGCGAGATTCACCAGAGGCTCGTGGATACCATTTGCCAATAGTAGGGCAGGTCTAACCAATCACTCAAATAAGTGAAGTGTGAAAAGTGAAATATGCATGTCTCACTAGTATAATGCAAGTGTTTAGCCCGACCCGGTAGTGGGTTACTTACGGAGCATTTTGTACTCATTCTTTTCATGTTATGTTTTTCAGGTAAGGAAAAGGACACCTCAACGAATGAAAGGATACCTTGACCGTGCTATTAAGATTAGTTAGATGCTTCCGCACAAAGATTTCATGTTTTCTGTTGGGCCGGTATGGTAACCCTAGAGGGGGGTGAATAGGGTTTAATTAAACTTATTCCTAAATATGCTCAAATTAAACTAATTGAATTAATTTTTGAATTAAATTAATAAAAACCTTAATTGATGCTAAATATCAAGATTGATAAAAAATATATGAAACACAAGATTTAATCAATCTCAACAAAGAAGGACAGTGATTTATAATATGCTACTAAAAATTGAATGCAAAATAAATTGAGAAAGAGTTGGAGAAGAAGACACCGTGATTTTTATAGTGGTTCGGTCCAACTCGACCTACATCCACTTTCCCAAGCGCCTCTTGGGATTTCGATTAAAAAATCTCCTTTGACTCTTTCCACGGATGAGAGTCGAACCGCTACCTTGCTCCTTTTTCGGGTTCAAGAGCAAACCCGATCCTTTCCACGGGTTAGGATCCAACCGTTACAATATTCTTGAAATTTTAAATCACACACTAAAACTCTCTAAAAAAAGTAGATGTACAAATTTGAACTCACAATACTCAATCCTCACAATACAATGAAAGTATCTCTCTAGAATAAGATGAAAAGAAAGAAATTTGAAAGCTTGGAGAGAGAGCAACAATGGTGACCTTTTTCAATTTTTTAGAATTGTAAAATTGTAAAATTGTAAAAGTTGGGAAAACTTTTTGGAGAAGATGAAGTATTTAAAAAGAAATGAAAGTGAGTGAAAATCAAATTAATTTGGACCATTAGATCTTTGTAAAAGAAAATTGAATGGTGGAGATTTAAACTCAACTAGCCGTTAGACACGAACATATAATAATATTAAATTAATCTTTTTAAAAAGGCAACTAGCTGTTAGACACGAACATATATAATATTAAATTAATCCTTTTAAAAAATCAACTAGTCGTTAGACACAAACATATATAATAATATTAAATTCATCTTCTTTTTAAATTCATTTTCTTCTTAAAATCATTTTCTTTTTAACATCAATCCAAAAATAAAAGACTCACCGATTGTCACTTCTCCATTACTACCTTTCAATTTGTCCACTTTGATTAAAAAAAATCTGCCACGTCATCAGCTCGGGAATTTTTCCATTAAGCTTGTTTCTGTCATATCTTCTTCATTTGAATTCCGATTTGAGTGATTCAAATTGCATTGGAACCGTTGTTCCAAGCTCCACACAATAGACACTTCAAAACACTCAAATGATTAATAAATAAAATCAGGTTTGTTATCATCAAAACACTAATTAATCAATCCATTAAAATTAATTAATTTGAGATTAAGGGCCAAAAAGCCAACATTTTCATCTTTAAGAATTTTGGTTCTGTCATTTGAAATCAGAACTTTATTTTTCTTTTAAAATTTCTCATGGTCAGATGTTTTATACAAGTTTCTTGTTTATTAAATTGCACAAGGAGTACCCGATCAAAGATTTTTAGTTATTTGGATTTTGCAAAAAATATTTATTTTAGTAAAAATTTCTTTTGATTTTTAGTAAAATTACGAAGAATAGCCATTTGAGATGTATGCATGCTTGTAGTAACGATCTAGTTCAAGTCCTAGAATGTCGGGTCGTTACAATCTCAACCTTTTAAAATAAAATAAATATCAAAGGAGGAGGGTGTTTTAAACTTGTGACTAATATCCTAACTAGTTAACAATTAAGTTAATACAATATTAACATTTTAATCCTCAAATTCATCTTAATATGTTGTTACAAATACAAATAAATGCAATAACAGTGCTATGTAAATTAACAAAATTCGAAAGAATGTTTACTATAAATGTAATCTAAAACAAGATATTCATCTCTATTTTTTAGTTCAAACATTATAGAATAAAGATCGAATATTAGTATTTGATATGACAATTGATGTCTTATCCCTTGAACACTCAGACGGACATAAAGTTAGAAACTCTCATTATTAAAAAAAAAAAAAAAAGTTAGGAATTCTCAAACTTATATTGGCCATGCATTGAGAAGAAATTTGAGACGAGAAAGATGAAGGTTGACAATGGACAAAAACTTTTGCGATAAAAGATGGAATTTATAGAGTGACACAAAACACAATTACAAATAGATATTTAATATTTAGGTTAAAATACCACTTTGGTCCCCATATCTTGAAGTTTGTTCAGTTTCATTTCCCATACTTTCAATCATTTAATGTTAGTTTTTGTACTTTCAATAAATCTAATTTGGTCACTCAAACTTACTTTTTTACCAAAATTAATTAAATAATAATAATAATAATAATTTTCATGCAAAAAAAAAAAACATGTGAATATGTTTTCGAATAACGAAAGTTTGATTAAAAATTATTTTTGGTCCATGAAAGTAACAATTTAGTCCATTTACTTTGGTTTATAAACATGTAGTCTATGTACATTCAATTTTGTAACAATTTAGTCTCTAAACTTTAGTATGTAACAATTTAGTTCTTATATTTTCAAATTTGTAACAATTAAATCCCTAACGTAAAAAAATTTATCAAAATTAGATGTCATTATTTTATTATGTAGACTTTGTATTTTGTAAAAGCATTGATTCTTTAATTAGTTTCGGTTTATTTATGCAATGAATCTCATTAAACCTTAACACTAATTTCTATAATAGAGACTAAATCATTACAAATTTTAAAATATAAGGGCGACAAAGTTTAGGACTAAATTATTACAAAATTGAAAGTACAAAGACTAAATTGTTACAAACTAAAGTATACGGATTAAATTGTTATTTCTATAAAAGTTTAGGAACTAAAAGTGATTTTTAACCTAAAAATTTTATAGATAACAAAAATCAACAAAATTTAGTACTGGGGACTAAATTTAAAATTTATTAAAAGTATAGAGACTAAAATTGAACAATTGTAACTAAAATAGAACAAACTTCAAACATATTTTAACCTAATATTTATAATCCTTACTTTTTATTTATTTATTTTTATAATATTACATCATATTTACTATAGGGTTCAAACTTTTTGACTTTTAAAAGGTACTTTTAACACTGAGTTGACACACATATTCAATCCTCACTATCCTAACTTGAGTAATTTCAAGTGAATTCCATTGCTTCTTATCATATAAATTATTTGGAATTTTAATTGATCTCAAACCTTGTTTTATGTACAAAAGATAACTAATCAAGATGGTAGGATTGTGTAGCATCACATTCATTCAATGTTGAGATTAATTTTTATTTAACCTTATTAGATTTATATCTTTTTTAATTAATCAATTGACATTAAAAGCCTATATCAATACACTTTTTATTTTATTTTATTTTCAGGGCATCCAAACTAAGAAAATATTATTATATTCATTTCAAATCTTTTTCATTATAAATTGCATATAAAATTCAAAACTAACTCTCAATTTTCAAATACTTCATTATTTTACTTCTTTTAATCTCAAAGAAGGAATAATTACACCGTCTTAATATATATAGAGCAAATTGTAAAAAAAATACCTTAAAAGTAGGGTGGTAGTTGCAATTAGACCTTGAATTTTCTATTTTAAAAATTAAACTCTCAAAACTATAAAAAAAAAAATGTTAAAATTGAGTCAAATTCGACCTTTAAACTTACATAATTGTATAAATTATAATATTTGTATAAGTTCAATAGTCCAATTTTTTATCATTTATGAGTTCAATTTCTATAATTATTGTAAGCTTGAGGGTCTAGGGCCCAATTTTTACAATTGAAAGTTTGAGTGTCTAATTGCAATTATCACAATATCTCAAAGGTGGTTTTTGCAATTTGTCCATATAGATATATAAACAAAATAAATATATTTTAAGAGTAAGTAAACACTCATTTTTATGCAAATTTGAATTTTTGACCTCTTTAATTGTGAATGTATATAAATCACATTTTATTTTTAAGTATAGTAATAGATAGAGATTTTAATTTACTATTTAAATTTATGGCAAAAATCAAAAACCACCATCAATGGTAAAACTAAGCTCTCAAGTTTATATAAATGATAAAATTAGACCTCAAACTTAAGTAAGTATAGAAATACTAACAATGGAATAAATTTGACTGCTTACTTTTTATTATTATTTGGAGATCTACTTTTTATAACTAAAGTTTGAAGTTCCAAATTTAATACTTAGCTTAATTTTCATGTAATTACACCTCCCACCGTATTTCACAATGGATTTTGCAATTTGCCATTGAATTTAGGATATATTTGATTTGACAAGACAATTTGATGTCTTTTAAAAGAACTGTGCATATTTTTAAAATTTCAAGAACAAAATTCAATTCAAGCATTTACTAAAAAGTCTCAAACCAATATTTTATCCGACTTTTCGTATGAAAATTTGGCTCTGATCCTTGTGTCAATGATGAAAAATTGATTACTCCTCTCCCATTTCTGTACTTATTCTCTGTGGCCGATTAAACCTTTCTTCTTTGTCATTCCAGAGCTTTCCCCTTGTCTTCTACTTCTGGGTTTTCTTCATTGAGCTGGGATTTTCACGCCATTGCGAACCTGCACTTGTAAGAATCAAGCTTCCCTTTTTCCCTTTTTTCTTTAGGGGAAATGAACCATTTTTCATTCAAAAATCAATATTGGGTCAAGTGGGTAGGACATGGATCTTCGAACAAGTCCTGTTTTAGACCATATCCAAGGGGATTAGATTCTGGGATGTCTGTAAAATATTATTTCTTTCTTGTTGGTTTGATATCTGGTGTAATGCTTCTGTTTGATTGAGTGTGGGAGAAGGAAAAGGATTATTTCTTTATTTATTCTTGTTGATGTTGTCCTTTTCTCATTGTCCATAAGTTAAAAGAGGGGCTATTTGTTTAGAAATATTATTGTGGATGATGGATTATACCCTTTGAGTATGCTATCGCTCAGGCATTGGAGTCATCTATCAGACAACTTTAAATATTATCTTCTGCTGTATAAGATGTTGAAGGTTGAACTCTGATATGCCTGTCTAATTTAGGTCTTAATGGACAAGGGGATCTAGTTTCTTGTAAGGCTTTGTTATTTGATGGTTTATTTCAAATTTTGTACGGCTTGTGGAGTTGTATAAAAAGTTGTTGTAAGTCTGATATATTTGTTTCTGTGGATTCATTGGCAACTTTACTAGCATAATACAGCCCCTTGATTATCATGTTTTTTTGTTTGTAATATTAGATCTTTGTGGAATTCTTGTTTTTAAAGGTTGTCTAAATAATTTGGTTCATTTGGTTGATGCAAATGTTCTACTTTTTGGGGAGCATATGGGTGAGAGATAATATGATGCTATAGTTTTACATGTCTGACAAGTGATGCCATTGTGCAATTCTTGGCAGGCTTTCTTTTGAAATATTTTAGGTGTTGGAATTCAAAATGTCGTCTCCAAACAAGCGGAGAGATATGGATGTCATGAAGTTGTAAGTTGATTTACAAATGAAGTTTTCTCATTAGTTTCTGTTTGACTGCTGCTACATTCAGTTTCTTGTTCTTGCATATAGAAAAATTAATGAAAAACTATGATGAAGGTGCTGATACCTGATCTTTAGATATTATAATGTAGTCCTGGATTTTGGGGTATATGCAGTAGAAGGACAAGAAGAATCAACAAGGAAAAATAGTAGTGTTAAAGTTTAATGACCTTGAAACTTGAAAGTACTAATGTAGTGATAATCCTGAACTTTTTCTTTTTCTACATAATGTTGTTCTTTCAACAGTGATATAAAAATGCTGATACCATTTTCCTTGATGAATTGTAAGAGAAATTAAGGAATGATTTACTTTCTTAGAGCTCTATGACCTACCATTATGATGTTAGAGGATCCCAGGGAACTTAGTTTAGACATAAATTTGGAGTAGTAACTACCAAATTTTCATTACGTTTCATGCATCAGCTGGAGAACAAAAATAGTTGCATATATTTGCAAATTGACAGAAATAGGATTGAATCTTTTATTATGAAATCCACATGGGAAAATAAATATTTCATGTAATTGATGTTTTGGATGGCCATGATTGAAACATCTACGGAGTTTGTCAGTTTATTTGATTAATAGGAGCTTTATTATGCACTAAAAGTTTGTAATTCTATTTTCATAGATCCCCATTATGCTTCCTTAAGTTGAAGAAGGTATTGATTTGTTATTTCTTTGTTGAAATTCTCACATACTAAATCCAGGATGATGAGTGATTACAAAGTGGAGATGATCGACGATGGGCTCAGTGAATTTAATGTCGAATTCAATGGTCCAAAAGAAAGTATTCCCTATTCTCATTCTTCTACTTCTATTACAATGTATTTCTAGTTGCTCCAATGAGTAGGGATGGTGCTGAGTAGTATATTGCAGGTTCCAATTGACTTTTTCATTTTCTTGAGACCTTTAGTTTATGAGTATGCATATGGATGGATGGCAAAGTTTTCCCCTTAACTAGCGGTTCAACTTCCAAATGTTGCTCCATAGTCTCGTCTAGATTGTTCATTTTCATAGTTACATAGCATGATCCTTGAGCTTTAAATAGGCTTCATAACCCCAAAGTCTTAGAATGTTTAACTTTTATGGTGAATTAAAGTTCTGATGAAGTTCTCGTGTGTTTGCTTTCAAATACATTACCCATGATTTGCTTGAACATTCTAATGTATAAAATGCCTGAAACATTGACAGGCTTGTATGAAGCTGGGGTTTGGAAAATCCACGTCGAACTTCCTGATGCTTATCCATACAAGTCCCCATCTATTGGGTTTGTGAACAAGATATATCATCCAAATGTTGATGAACTGTGAGCAAGCTAGACCTCACTTAGTGTGGCTCTCAACTTCTTTAAGATTGTTATGTTATCACTCTAGGGTCACTGCTGATTCTTATTTTTATGAGGTAGGATTTTTTTCAATGGTTTTAAAACTCCTTTCCACTTGCAGATCTGGTTCTGTATGCCTGGATGTGATTAACCAAACTTGGAGTCCAATGTTTGGTAACTTTATACCAATTGTCATTTTACTTATTCAAGCTCAAAACCTGACATGAATGTTGACTGACAAGTTTTTTTTTTTTCTTCTTTACTTCTTTTTTGTTGCATACTTCTGTTTTTCAGACCTATTGAATGTTTTTGAAGTTTTCCTTCCACAGCTTTTGCTCTATCCCAATCCTTCAGACCCCCTTAATGGTGACGCAGCGTCTTTAATGTTAAAAGACAGAAGCCAATACGAACAAAAAGTCAAAGGTATGAGTTTATTTTGGTAATTAGAAAGAAGGTTATGTCATAATAATGCCATGTCAAGATCGTAAACGAGTGTCCGACTTAGGTAAGTATGTATCTGTAGTAACACAGCTGTTCATTTGTATGTTTCTTTTGGCATCTGTATACTGGATATTGTTGAATGTGCTACTCCTCCCTAAGGTATCAACTCTCCATGTACAATCTTGGTTATGAACCATTACACTTATATCGTTTTTAGTCCCAATACTATGAATTCTCTACTACGATCTTGAGTTTTGCATAAAGTCTACTTTTATCATTGTATTGAGATTTCTCTGTCGCATTTAATAAGAATATTGCATAGTGGGATGTAGATTTGTATTTGAAACCATTATTAATGTCTTGAAATGCTTTGCATCTGTAATCTAGCACTTTGAATGACTAAGCACGGGATCTCGTTGCATGATCAGTGAGTTGGAGTTTAGGGGCGAAGCGTCCTGTTATCTGATGCTCTTACTTGCATTTTGTACTTTGTTACTTCTCAAGATAATAAAACGTTTCTTTCCCTGCCTATGAATAATAGCTATTAGCTAATACACTATTAGTGAACTACGTAAATCTGTAATCGATTTTCTTATTTGATTCTTTGCTAATCGCATAACATAATTTATTTGCAAAATTGTGAAAAAAAATATACATATATAGAAGTACAAGACAAGGATGAGACCAAGATCTTGGAAAGTTAGAATTGAGTAAAGTTTTTATGAGACATAAATGGAAGTGCATATTGTTAGTTTGTTGTTTGGTATGACAGAGTATTGCGAACGATACGCAAAAAGGGAAAATGTGGCGAATTCGGCTGCAGAAGACGAGAGTGAAGAAGATGTAAGTGATGATGAAAGTGATTCAAGTGACAATCATATTGCTGGTCATGTTGATCTCTAAAGGCCTTACTAGATTCAAAGTATCCCTCATTCAGACCAAAAAAGAAGAAAAACATGGAATGATATGTTCCATTACATTGACTTGTTTGTAATGAAATGATATTGCTCTTTGTTTTGCCAACTTACAATTAGGCTGTAAAATAATGAATGGTTTTCATGTTTTGGGGGTAAGTGGAAGTACACACTTAGATGTTGCTGAAATTGCTAACTTTGGTTTGGATGTTAAATTAATGTCAGGTTTGAA

mRNA sequence

ATGGCTTTAGCAGATTTGATGGCTAATTCCAGCTCCTCTTGCCATCATAATGTGGCTGCGTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGGAAAGTTCAGAAGCTTCGGTGGGTGGTGCCCGGTGGTCGAGGGTTGCGACAGGAACATCTCTTCGCCAAAACAGCTCATTATATATTGCATTTGAGATTGAAAAGCTTTCCCCTTGTCTTCTACTTCTGGGTTTTCTTCATTGAGCTGGGATTTTCACGCCATTGCGAACCTGCACTTGTGTTGGAATTCAAAATGTCGTCTCCAAACAAGCGGAGAGATATGGATGTCATGAAGTTGATGATGAGTGATTACAAAGTGGAGATGATCGACGATGGGCTCAGTGAATTTAATGTCGAATTCAATGGTCCAAAAGAAAGCTTGTATGAAGCTGGGGTTTGGAAAATCCACGTCGAACTTCCTGATGCTTATCCATACAAGTCCCCATCTATTGGGTTTGTGAACAAGATATATCATCCAAATGTTGATGAACTATCTGGTTCTGTATGCCTGGATGTGATTAACCAAACTTGGAGTCCAATGTTTGACCTATTGAATGTTTTTGAAGTTTTCCTTCCACAGCTTTTGCTCTATCCCAATCCTTCAGACCCCCTTAATGGTGACGCAGCGTCTTTAATGTTAAAAGACAGAAGCCAATACGAACAAAAAGTCAAAGAGTATTGCGAACGATACGCAAAAAGGGAAAATGTGGCGAATTCGGCTGCAGAAGACGAGAGTGAAGAAGATGTAAGTGATGATGAAAGTGATTCAAGTGACAATCATATTGCTGGTCATGTTGATCTCTAAAGGCCTTACTAGATTCAAAGTATCCCTCATTCAGACCAAAAAAGAAGAAAAACATGGAATGATATGTTCCATTACATTGACTTGTTTGTAATGAAATGATATTGCTCTTTGTTTTGCCAACTTACAATTAGGCTGTAAAATAATGAATGGTTTTCATGTTTTGGGGGTAAGTGGAAGTACACACTTAGATGTTGCTGAAATTGCTAACTTTGGTTTGGATGTTAAATTAATGTCAGGTTTGAA

Coding sequence (CDS)

ATGGCTTTAGCAGATTTGATGGCTAATTCCAGCTCCTCTTGCCATCATAATGTGGCTGCGTCAAGCTTGAAGAGGAAGAGGAGAGAAGCACGAGAGGTTCGCCGGAAAGTTCAGAAGCTTCGGTGGGTGGTGCCCGGTGGTCGAGGGTTGCGACAGGAACATCTCTTCGCCAAAACAGCTCATTATATATTGCATTTGAGATTGAAAAGCTTTCCCCTTGTCTTCTACTTCTGGGTTTTCTTCATTGAGCTGGGATTTTCACGCCATTGCGAACCTGCACTTGTGTTGGAATTCAAAATGTCGTCTCCAAACAAGCGGAGAGATATGGATGTCATGAAGTTGATGATGAGTGATTACAAAGTGGAGATGATCGACGATGGGCTCAGTGAATTTAATGTCGAATTCAATGGTCCAAAAGAAAGCTTGTATGAAGCTGGGGTTTGGAAAATCCACGTCGAACTTCCTGATGCTTATCCATACAAGTCCCCATCTATTGGGTTTGTGAACAAGATATATCATCCAAATGTTGATGAACTATCTGGTTCTGTATGCCTGGATGTGATTAACCAAACTTGGAGTCCAATGTTTGACCTATTGAATGTTTTTGAAGTTTTCCTTCCACAGCTTTTGCTCTATCCCAATCCTTCAGACCCCCTTAATGGTGACGCAGCGTCTTTAATGTTAAAAGACAGAAGCCAATACGAACAAAAAGTCAAAGAGTATTGCGAACGATACGCAAAAAGGGAAAATGTGGCGAATTCGGCTGCAGAAGACGAGAGTGAAGAAGATGTAAGTGATGATGAAAGTGATTCAAGTGACAATCATATTGCTGGTCATGTTGATCTCTAA

Protein sequence

MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRQEHLFAKTAHYILHLRLKSFPLVFYFWVFFIELGFSRHCEPALVLEFKMSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGHVDL
Homology
[Close]
BLAST of Clc01G13750 vs. NCBI nr
Match: KAG6573044.1 (Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.1 bits (1141), Expect = 8.9e-121
Identity = 238/291 (81.79%), Postives = 254/291 (87.29%), Query Frame = 0 

Query: 1   MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRQEHLFAKTA 60
           MA  DL+ NS+SS + NVA S LKRKRREARE+RRKVQKLRWVV GGR LR+EHLFAKTA
Sbjct: 1   MASPDLVPNSTSSFYDNVAPSRLKRKRREAREIRRKVQKLRWVVAGGRALRREHLFAKTA 60

Query: 61  HYILHLRLKSFPLVFYFWVFFIELGFSRH-------CEPALVLEFKMSSPNKRRDMDVMK 120
            YIL+L   SFPL+F    F + LGFSRH       C    VL FKMSSPNKRRDMDVMK
Sbjct: 61  SYILYL---SFPLLFS--PFVLHLGFSRHWRLPLHSCGIFEVLLFKMSSPNKRRDMDVMK 120

Query: 121 LMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYPYKSPSIGFVNKIYH 180
           LMMSDYKVEM+DDGL EFNVEFNGPKESLYE GVWKIHVELPDAYPYKSPSIGFVNKIYH
Sbjct: 121 LMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVNKIYH 180

Query: 181 PNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQ 240
           PNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDR+Q
Sbjct: 181 PNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRNQ 240

Query: 241 YEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSS--DNHIAGHVDL 283
           Y++KVKEYCERYAKRENV N++AEDESEE+VSD+ESDSS  DN IAGHVDL
Sbjct: 241 YDKKVKEYCERYAKRENVVNASAEDESEEEVSDEESDSSENDNDIAGHVDL 286

[Close]
BLAST of Clc01G13750 vs. NCBI nr
Match: XP_038895241.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 [Benincasa hispida])

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-95
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKES+YE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGH 279
           NGDAASLMLKDRSQYEQKVKEYCERYAKRENV NSAAEDESEEDVSDDESDSSDN IAGH
Sbjct: 121 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVVNSAAEDESEEDVSDDESDSSDNDIAGH 180

Query: 280 VDL 283
           VDL
Sbjct: 181 VDL 183

[Close]
BLAST of Clc01G13750 vs. NCBI nr
Match: XP_004152466.1 (ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_008438150.1 PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cucumis melo] >XP_008438158.1 PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cucumis melo] >XP_011651462.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_031743574.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_031743578.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >KGN64301.2 hypothetical protein Csa_013725 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.9e-94
Identity = 177/183 (96.72%), Postives = 179/183 (97.81%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKES+YE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGH 279
           NGDAASLMLKDRSQY+QKVKEYCERYAKRENV NS AEDESEEDVSDDESDSSDN IAGH
Sbjct: 121 NGDAASLMLKDRSQYDQKVKEYCERYAKRENVTNSGAEDESEEDVSDDESDSSDNDIAGH 180

Query: 280 VDL 283
           VDL
Sbjct: 181 VDL 183

[Close]
BLAST of Clc01G13750 vs. NCBI nr
Match: XP_038895240.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 2.5e-91
Identity = 179/206 (86.89%), Postives = 180/206 (87.38%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKES+YE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVK-----------------------EYCERYAKRENVANSAA 279
           NGDAASLMLKDRSQYEQKVK                       EYCERYAKRENV NSAA
Sbjct: 121 NGDAASLMLKDRSQYEQKVKVQMTKHRSLNARSVSPGRSTLLSEYCERYAKRENVVNSAA 180

Query: 280 EDESEEDVSDDESDSSDNHIAGHVDL 283
           EDESEEDVSDDESDSSDN IAGHVDL
Sbjct: 181 EDESEEDVSDDESDSSDNDIAGHVDL 206

[Close]
BLAST of Clc01G13750 vs. NCBI nr
Match: XP_022954942.1 (ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954943.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954944.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022994669.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994670.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994671.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994672.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_023541208.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo] >XP_023541209.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo] >XP_023541210.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.4 bits (882), Expect = 9.6e-91
Identity = 171/185 (92.43%), Postives = 179/185 (96.76%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEM+DDGL EFNVEFNGPKESLYE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSS--DNHIA 279
           NGDAASLMLKDR+QY++KVKEYCERYAKRENV N++AEDESEE+VSD+ESDSS  DN IA
Sbjct: 121 NGDAASLMLKDRNQYDKKVKEYCERYAKRENVVNASAEDESEEEVSDEESDSSENDNDIA 180

Query: 280 GHVDL 283
           GHVDL
Sbjct: 181 GHVDL 185

[Close]
BLAST of Clc01G13750 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-74
Identity = 134/183 (73.22%), Postives = 161/183 (87.98%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSP+KRR+MD+MKLMMSDYKV+MI+DG+ EF V F+GPK+S+Y+ GVWK+ VEL +AYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGF NKIYHPNVDE+SGSVCLDVINQTWSPMFDL+N+FEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDES-DSSDNHIAG 279
           NG+AASLM++D++ YE KVKEYCERYAK E+++    E+ES+E++SD E  DS D  I G
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180

Query: 280 HVD 282
           H D
Sbjct: 181 HAD 183

[Close]
BLAST of Clc01G13750 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-72
Identity = 134/184 (72.83%), Postives = 160/184 (86.96%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSP+KRR+MD+MKLMMSDYKVEMI+DG+ EF VEF+GPK+S+YE GVWKI VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAK-RENVANSAAEDE-SEEDVSDDESDSSDNHIA 279
           NG+AA+LM++DR  YEQ+VKEYCE+YAK R +    +++DE SE++ + D  D  D  IA
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTEEMSSDDEMSEDEYASDGDDEDDVAIA 180

Query: 280 GHVD 282
           G +D
Sbjct: 181 GKLD 184

[Close]
BLAST of Clc01G13750 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 2.7e-72
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSP+KRR+MD+MKLMMSDYKVE I+DG+ EF VEFNGPK+SLY+ GVWKI VELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPS+GF+ KIYHPNVDELSGSVCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDE--SEEDVSDDESDSSDNHIA 278
           NG+AA+LM++DR  YEQ+VKEYCE+YAK    +   + DE  SEE+   D  D  D+ +A
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPGEGSEDKSSDEELSEEEYGSDNEDDDDDDVA 180

[Close]
BLAST of Clc01G13750 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-68
Identity = 123/182 (67.58%), Postives = 149/182 (81.87%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           M+SP+KRR+MD+MKLMMSDYKV+ ++D L  F V F+GP +SLY+ GVWKI VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGH 279
           NG+AASL+++DR+ YE KVKEYCE+YAK E + +   +D+S  +   D  D  D+ I G 
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

Query: 280 VD 282
            D
Sbjct: 181 AD 182

[Close]
BLAST of Clc01G13750 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.9e-58
Identity = 108/182 (59.34%), Postives = 142/182 (78.02%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSP +R + DVMKL+MSDY+V +++D + EF V F+GP E+ Y  G+WK+HVELP  YP
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           +KSPSIGFVN+I+HPN+DELSGSVCLDVINQTWSPMFD++N+FEVFLPQLL YPN SDPL
Sbjct: 61  WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGH 279
           NG+AA+L+L++ + Y  KV++Y  RYA +E+ A+    D S++D        S + IAG 
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKED-ADITLNDSSDDDTMSSIDTESGDEIAGP 180

Query: 280 VD 282
           +D
Sbjct: 181 MD 181

[Close]
BLAST of Clc01G13750 vs. ExPASy TrEMBL
Match: A0A0A0LQU9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045930 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.6e-102
Identity = 206/263 (78.33%), Postives = 217/263 (82.51%), Query Frame = 0 

Query: 1   MALADLMANSSSSCHHNVAASSLKRKRREAREVRRKVQKLRWVVPGGRGLRQEHLFAKTA 60
           MALADLMANSSSSCHH+V ASSLKRKRREAREVRRKVQKLR  +          LF+ + 
Sbjct: 1   MALADLMANSSSSCHHSVTASSLKRKRREAREVRRKVQKLRVFL----------LFSTSG 60

Query: 61  HYILHLRLKSFPLVFYFWVFFIELGFSRHCEPALVLEFKMSSPNKRRDMDVMKLMMSDYK 120
              L     +  ++    +   E           VLEF+MSSPNKRRDMDVMKLMMSDYK
Sbjct: 61  FSSLSWDFHAIAILSLLSLEIFE-----------VLEFEMSSPNKRRDMDVMKLMMSDYK 120

Query: 121 VEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELS 180
           VEMIDDGLSEFNVEFNGPKES+YE GVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELS
Sbjct: 121 VEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELS 180

Query: 181 GSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQYEQKVKE 240
           GSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQY+QKVKE
Sbjct: 181 GSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQYDQKVKE 240

Query: 241 YCERYAKRENVANSAAEDESEED 264
           YCERYAKRENV NS AEDESEED
Sbjct: 241 YCERYAKRENVTNSGAEDESEED 242

[Close]
BLAST of Clc01G13750 vs. ExPASy TrEMBL
Match: A0A1S3AVD3 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483342 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 9.0e-95
Identity = 177/183 (96.72%), Postives = 179/183 (97.81%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKES+YE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGH 279
           NGDAASLMLKDRSQY+QKVKEYCERYAKRENV NS AEDESEEDVSDDESDSSDN IAGH
Sbjct: 121 NGDAASLMLKDRSQYDQKVKEYCERYAKRENVTNSGAEDESEEDVSDDESDSSDNDIAGH 180

Query: 280 VDL 283
           VDL
Sbjct: 181 VDL 183

[Close]
BLAST of Clc01G13750 vs. ExPASy TrEMBL
Match: A0A6J1JWI6 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111490313 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.6e-91
Identity = 171/185 (92.43%), Postives = 179/185 (96.76%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEM+DDGL EFNVEFNGPKESLYE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSS--DNHIA 279
           NGDAASLMLKDR+QY++KVKEYCERYAKRENV N++AEDESEE+VSD+ESDSS  DN IA
Sbjct: 121 NGDAASLMLKDRNQYDKKVKEYCERYAKRENVVNASAEDESEEEVSDEESDSSENDNDIA 180

Query: 280 GHVDL 283
           GHVDL
Sbjct: 181 GHVDL 185

[Close]
BLAST of Clc01G13750 vs. ExPASy TrEMBL
Match: A0A6J1GUH1 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111457050 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.6e-91
Identity = 171/185 (92.43%), Postives = 179/185 (96.76%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEM+DDGL EFNVEFNGPKESLYE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSS--DNHIA 279
           NGDAASLMLKDR+QY++KVKEYCERYAKRENV N++AEDESEE+VSD+ESDSS  DN IA
Sbjct: 121 NGDAASLMLKDRNQYDKKVKEYCERYAKRENVVNASAEDESEEEVSDEESDSSENDNDIA 180

Query: 280 GHVDL 283
           GHVDL
Sbjct: 181 GHVDL 185

[Close]
BLAST of Clc01G13750 vs. ExPASy TrEMBL
Match: A0A6J1C614 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008728 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 3.0e-90
Identity = 174/185 (94.05%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYE GVWKIHVELPDAYP
Sbjct: 1   MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEGGVWKIHVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPSIGFVNKIYHPNVDELSGSVCLDVINQ WSPMFDLLNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDELSGSVCLDVINQAWSPMFDLLNVFEVFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDES-EEDVSDDESD-SSDNHIA 279
           NGDAASLMLKDR+QY+QKVKEYCERYAKRENV  S AEDES EEDVSD+ESD SSDN IA
Sbjct: 121 NGDAASLMLKDRNQYDQKVKEYCERYAKRENVVTSTAEDESEEEDVSDEESDHSSDNDIA 180

Query: 280 GHVDL 283
           GHVDL
Sbjct: 181 GHVDL 185

[Close]
BLAST of Clc01G13750 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 274.6 bits (701), Expect = 8.7e-74
Identity = 134/184 (72.83%), Postives = 160/184 (86.96%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSP+KRR+MD+MKLMMSDYKVEMI+DG+ EF VEF+GPK+S+YE GVWKI VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAK-RENVANSAAEDE-SEEDVSDDESDSSDNHIA 279
           NG+AA+LM++DR  YEQ+VKEYCE+YAK R +    +++DE SE++ + D  D  D  IA
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTEEMSSDDEMSEDEYASDGDDEDDVAIA 180

Query: 280 GHVD 282
           G +D
Sbjct: 181 GKLD 184

[Close]
BLAST of Clc01G13750 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 273.5 bits (698), Expect = 1.9e-73
Identity = 132/180 (73.33%), Postives = 153/180 (85.00%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           MSSP+KRR+MD+MKLMMSDYKVE I+DG+ EF VEFNGPK+SLY+ GVWKI VELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPS+GF+ KIYHPNVDELSGSVCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDE--SEEDVSDDESDSSDNHIA 278
           NG+AA+LM++DR  YEQ+VKEYCE+YAK    +   + DE  SEE+   D  D  D+ +A
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPGEGSEDKSSDEELSEEEYGSDNEDDDDDDVA 180

[Close]
BLAST of Clc01G13750 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 259.2 bits (661), Expect = 3.8e-69
Identity = 123/182 (67.58%), Postives = 149/182 (81.87%), Query Frame = 0 

Query: 100 MSSPNKRRDMDVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYP 159
           M+SP+KRR+MD+MKLMMSDYKV+ ++D L  F V F+GP +SLY+ GVWKI VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 160 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPL 219
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 220 NGDAASLMLKDRSQYEQKVKEYCERYAKRENVANSAAEDESEEDVSDDESDSSDNHIAGH 279
           NG+AASL+++DR+ YE KVKEYCE+YAK E + +   +D+S  +   D  D  D+ I G 
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

Query: 280 VD 282
            D
Sbjct: 181 AD 182

[Close]
BLAST of Clc01G13750 vs. TAIR 10
Match: AT1G78870.2 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-20
Identity = 47/122 (38.52%), Postives = 71/122 (58.20%), Query Frame = 0 

Query: 125 DDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 184
           +D +  FNV   GP +S YE GV+K+ + LP+ YP  +P + F+ KIYHPN+D+L G +C
Sbjct: 31  EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRIC 90

Query: 185 LDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQYEQKVKEYCER 244
           LD++   WSP   +  V  + +  LL  PNP DPL+ + A     + ++     KE+   
Sbjct: 91  LDILKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRL 150

Query: 245 YA 247
           YA
Sbjct: 151 YA 150

[Close]
BLAST of Clc01G13750 vs. TAIR 10
Match: AT1G16890.2 (ubiquitin-conjugating enzyme 36 )

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-20
Identity = 46/122 (37.70%), Postives = 72/122 (59.02%), Query Frame = 0 

Query: 125 DDGLSEFNVEFNGPKESLYEAGVWKIHVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 184
           ++ +  FNV   GP +S YE GV+K+ + LP+ YP  +P + F+ KIYHPN+D+L G +C
Sbjct: 31  EENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRIC 90

Query: 185 LDVINQTWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRSQYEQKVKEYCER 244
           LD++   WSP   +  V  + +  LL  PNP DPL+ + A     + ++  +  KE+   
Sbjct: 91  LDILKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 150

Query: 245 YA 247
           YA
Sbjct: 151 YA 150

The following BLAST results are available for this feature:
BLAST of Clc01G13750 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573044.18.9e-12181.79Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038895241.12.9e-9597.81ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 [Benincasa hispida][more]
XP_004152466.11.9e-9496.72ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_00843815... [more]
XP_038895240.12.5e-9186.89ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Benincasa hispida][more]
XP_022954942.19.6e-9192.43ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954943.1... [more]
BLAST of Clc01G13750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P165772.2e-7473.22Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1... [more]
P427491.2e-7272.83Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S... [more]
P427482.7e-7273.33Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S... [more]
P427505.3e-6867.58Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S... [more]
Q9P7R42.9e-5859.34Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of Clc01G13750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQU92.6e-10278.33UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045930 PE... [more]
A0A1S3AVD39.0e-9596.72ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483... [more]
A0A6J1JWI64.6e-9192.43ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GUH14.6e-9192.43ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1C6143.0e-9094.05ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Momordica charantia OX... [more]
BLAST of Clc01G13750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G63800.18.7e-7472.83ubiquitin-conjugating enzyme 5 [more]
AT5G41340.11.9e-7373.33ubiquitin conjugating enzyme 4 [more]
AT2G46030.13.8e-6967.58ubiquitin-conjugating enzyme 6 [more]
AT1G78870.22.5e-2038.52ubiquitin-conjugating enzyme 35 [more]
AT1G16890.24.2e-2037.70ubiquitin-conjugating enzyme 36 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..43
NoneNo IPR availableSMARTSM00212ubc_7coord: 103..247
e-value: 2.2E-47
score: 173.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..282
NoneNo IPR availablePANTHERPTHR24068:SF332UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKEcoord: 102..281
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 102..281
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 110..241
e-value: 6.2E-39
score: 132.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 99..247
score: 41.522919
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 109..242
e-value: 2.87224E-50
score: 160.446
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 95..261
e-value: 2.3E-48
score: 165.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 103..248
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 172..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G13750.2Clc01G13750.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity