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Clc01G13690 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGAAAAAAGGTTTTGGCGTAACATCCAAACGCGGGTCGTTCCTAATTGAATCAAAGGGCCGGAATCCCACTTGACCTACCATCGCCCAATCGTGACCGTGAAATTAAAATCCAATTCACTCATCACTTTCCTTTCATATTCAGATATTTGGAAGAAGAAATTGTGATTTGGAGAGAAATAGGAACAATAATGAAGGCATGGTTGTAAAATCCATCCCCCAAAATTTTCTCTTCCATTAGGAACCAAACAAATTAGAAAAAGCAAGCAAGCAAGAATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGGTTTCTTCTTCTTCTTTCGTTTCTATTCCTTTCTACGTCTAAATCGAAAAATTATTCAATGAAATCGGTACATTTGGAGGGTATAGTGCTCCATTCTTTCATTTTGTATAGTTTTACCAATGTAGAGGAAATTTTAATTTAGGAATAAAATATATCTATTAGTATGTTGATATATATCCGTAAATCGTAGTGTTCAACATACTTTGAGAATTAATTGATAACTCCGATTTTTTTATTATTATTTTTTATGTTTATAAATACCCATAAAACATGAAGAAATATCACCTACTGATCTCAATGCAGAGATATGCTAATACAAAAATCCATATCTATGATTTCAATGTTGGGTAATTTATTATATTAAAAAAAGAATTAAGAATTTTAAAGGTTTGTCTTCTCTTCAATAGGTTGGTAGCTGTACTTTCTTGGTGGGTTTCCTCTTCTTCTTTCCTCAAAATTTTGTACCATTTTTTGTTTGTTTGTTTTCTTTTTCTTTTTCTTTTTTTAAAAAGTGGAGTTGTGCAAATGACATGGTACCATTTGGATACAAGTTTAAAATATGTATATCACAATGGATAAATGCATGGTTATAAGAATTAAGTTTTTGAAGTATACATGTTTTAAAATTATTTTATTCAATATATAAAATTATCAGCCACATTATGGTAGAGTATAAAAAAGATATTTATTTTGATTTTACACAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAATTATTTAATTTCTACCTAATTCTCTTCTCATTTTTCTAATCATTATTTTTTTTATTCAATTTCTGTCAAATAAAATAATGTCTTCTTTAACTAGTTGATAAGTTCGAATTAATAAAATTTTAGCATCTTTTTAGGTTATTTAGTGTTCTTTCTAATTGTCACTAAATTATTAAATTATGCTGTTAAATTATGAAATAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTAGAAAAAGTTGTGTAATTATAATAATTTGGCATTCTCTCAATGGGGAACTGTGTAGTTTATTTTAGAAATATTATGGGTTATTTTCCAGTTTTTCTCCTCAATTTTTCAAAAAAGTTTTAATTTTATTTTTTATGTATGTAAAGAAAATATGTTAATTTGATATTCATAAAATGGTTATAATAATGTTAAAACATAGTTTCTTAATTGAGTTGAAAACACTCTCATCTATATATGTTTATATTTAATATTGGTGTAAAAAAGACATATCTACCCACAAAATCGAAATTTACCTACTTTTATATATGTGACATAATATTGGAGGTGTAACTTACCTAACCCACGAGTGCCTCTATATTTTATGAAAACAATACCCTTTGAAAAAAAGTATTCTACTACGTACTAAATTAACAAGAGAAATTATCTTAAATGACAAAACTACTAAAAATATTTATAATTAATAGTAAAATACACAGCCTATTAACGATAGATCGTGATAATAGATAGTGAAATTTTACTATATTTATAAATATTTTGGTTTTTTTTGTTATATCTAAAAAGAGTCCAATTAACAATATTTTGTTTCTTAACTAAAAAGATTTTTTCTCTTTTAATATGGAACAACAACACTTCAACATTGAATGAAAACAAAATACGCAAAAGGAATAAATTTGAAACGAAATAAAATCAATGATATGAAATTGAAAAATAACACAAATATTAGAACCTAAGTTTGACACATTTTTTCCATGCATCTTGAAAAAAATTATACAATGTCTTCTCAAACATTGTGTAGCTAGCTAATATAGTTATCCAGACTAAGAGCCCTGAGAAAAAATTATCTAAAATACCCAGACTTTGAAGTAGTTGTCGAACACTCTAATTTTTTTTAAATGATTTATTTTTTAAATTAAACAGTTGAAAATGTATTTTAAACACACCTTAAGTATTCTATAGAGCTTCTTATAAATTGAGCTTCATTTTTATATGTTCTGTGTGATTAAGTCAACTACTTTATTATGGGTGATTTAGGTCATCGCGATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAGGAGGAAGAAGAAGAAGAATTATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATTAACTTATTACATTTTTCATTTCGTTTAATTAATTATATACCAACCTTTCTTTTTTCTATTTATATTTTAATGCAATAATAATTGTAATAATTCATTGCAGTGCACATGATCTCCACGTGTAATTATTAATTGATCTCACCATACACAATTATTATTTAACAAACCCCAG AAAAAAGAAAAAAGGTTTTGGCGTAACATCCAAACGCGGGTCGTTCCTAATTGAATCAAAGGGCCGGAATCCCACTTGACCTACCATCGCCCAATCGTGACCGTGAAATTAAAATCCAATTCACTCATCACTTTCCTTTCATATTCAGATATTTGGAAGAAGAAATTGTGATTTGGAGAGAAATAGGAACAATAATGAAGGCATGGTTGTAAAATCCATCCCCCAAAATTTTCTCTTCCATTAGGAACCAAACAAATTAGAAAAAGCAAGCAAGCAAGAATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTAGAAAAAGTTGTGTCATCGCGATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAGGAGGAAGAAGAAGAAGAATTATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATTAACTTATTACATTTTTCATTTCGTTTAATTAATTATATACCAACCTTTCTTTTTTCTATTTATATTTTAATGCAATAATAATTGTAATAATTCATTGCAGTGCACATGATCTCCACGTGTAATTATTAATTGATCTCACCATACACAATTATTATTTAACAAACCCCAG ATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTAGAAAAAGTTGTGTCATCGCGATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAGGAGGAAGAAGAAGAAGAATTATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA MAVIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDPFRFCSLGCKVVQVVPLVCNVVLFIIFPSRKSCVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF Homology
BLAST of Clc01G13690 vs. NCBI nr
Match: XP_038895394.1 (uncharacterized protein LOC120083632 isoform X1 [Benincasa hispida]) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93 Identity = 191/240 (79.58%), Postives = 195/240 (81.25%), Query Frame = 0
BLAST of Clc01G13690 vs. NCBI nr
Match: XP_023538148.1 (uncharacterized protein LOC111799005 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 333.2 bits (853), Expect = 1.9e-87 Identity = 175/236 (74.15%), Postives = 186/236 (78.81%), Query Frame = 0
BLAST of Clc01G13690 vs. NCBI nr
Match: XP_022969532.1 (uncharacterized protein LOC111468520 [Cucurbita maxima]) HSP 1 Score: 331.3 bits (848), Expect = 7.1e-87 Identity = 175/236 (74.15%), Postives = 186/236 (78.81%), Query Frame = 0
BLAST of Clc01G13690 vs. NCBI nr
Match: XP_022938109.1 (uncharacterized protein LOC111444296 [Cucurbita moschata]) HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86 Identity = 174/236 (73.73%), Postives = 185/236 (78.39%), Query Frame = 0
BLAST of Clc01G13690 vs. NCBI nr
Match: XP_004139563.1 (uncharacterized protein LOC101204359 [Cucumis sativus] >KGN64871.1 hypothetical protein Csa_022811 [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 4.6e-86 Identity = 182/242 (75.21%), Postives = 189/242 (78.10%), Query Frame = 0
BLAST of Clc01G13690 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26 Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = 0
BLAST of Clc01G13690 vs. ExPASy TrEMBL
Match: A0A6J1HWK1 (uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.4e-87 Identity = 175/236 (74.15%), Postives = 186/236 (78.81%), Query Frame = 0
BLAST of Clc01G13690 vs. ExPASy TrEMBL
Match: A0A6J1FD43 (uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC111444296 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86 Identity = 174/236 (73.73%), Postives = 185/236 (78.39%), Query Frame = 0
BLAST of Clc01G13690 vs. ExPASy TrEMBL
Match: A0A0A0LY15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86 Identity = 182/242 (75.21%), Postives = 189/242 (78.10%), Query Frame = 0
BLAST of Clc01G13690 vs. ExPASy TrEMBL
Match: A0A1S3CGK9 (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.4e-85 Identity = 180/242 (74.38%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of Clc01G13690 vs. ExPASy TrEMBL
Match: A0A6J1DG68 (uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020539 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 1.2e-79 Identity = 170/238 (71.43%), Postives = 182/238 (76.47%), Query Frame = 0
BLAST of Clc01G13690 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein ) HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55 Identity = 122/241 (50.62%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of Clc01G13690 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 166.8 bits (421), Expect = 2.2e-41 Identity = 102/240 (42.50%), Postives = 129/240 (53.75%), Query Frame = 0
BLAST of Clc01G13690 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 162.5 bits (410), Expect = 4.1e-40 Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0
BLAST of Clc01G13690 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 162.5 bits (410), Expect = 4.1e-40 Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0
BLAST of Clc01G13690 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein ) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-39 Identity = 106/254 (41.73%), Postives = 133/254 (52.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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