Clc01G13200 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G13200
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionshort-chain dehydrogenase TIC 32, chloroplastic-like
LocationClcChr01: 24967365 .. 24970834 (-)
RNA-Seq ExpressionClc01G13200
SyntenyClc01G13200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAGACTATTAGGTATTTGGTTGGAATAGCAGGGCCAAGTGGGTATGGCTCTAAAGCAAGTGCAGAGCAAGTTACTGAAACTTATCAGTTTTCTTCTCCTTTCACTGCCATTATCACTGGTTAGTATTTCAATAAACCTTCTACAATTACACCTACTATATTAAAAATAAAATAAAATAAACATATTTGATTGTCTAAGTTCACTTTATTCTGCATGTTGCATCTAATTTTTGGATGGTGCTAAGTTCGAAGTTCTGGTCACTTGTGCAAAGTTAAAGCTATCTTTTTTAAGGGGAAGAAAAAAAAAGCCACAAAAAAGAGTACTGAACAGAACCAAACTGTTCTATGATTTGGTTTGTGGTTTTGTATTTAAAATGGTTAAAATTTAGAAACCTAAATGAACAAAATTCATGTGTGTATACGGGATAATCAAACTAAATATCATAGGGGGTTTACTAGTTTAGTTACTCTTTTACTTCATTTTTGTAACTTTACTTCCTACACGTGTGAGAAGGAAATCAAATCTTTAACCTTTTGGTCAATGTCCTAGTTTTTTAACTAACTGAATTATGTTTAGCTTGATTTTAATTAATGTCTTACCGTCAAGGCTCCATCTCTCTAATTTGGTTCATGCGAGTGTTCAAAGTTAAATCTATTAAACCAAATTGAAGACGGTCTATTTTGGTTTTGATCTTGTCAGTAGTTTCAAAATTATAGAGAAAGTTTAGACTATTCGACAATCATTTAATTTTGAAAATTAAGCTCGTAAATATAGTTAAACGATACATCTATTAATTTCTTTGATTTGCTATCTACTTTTTTAGAAATATTTTGAAAAGTATTTAAAAATTTGTTTTTGTTATATAATTTGGCAAAAATTTAAATACCAAAAATCAAAACTAAATGATGACCGACACAACTTTAATTATACATCTACAAAGAAAAATAAGGTGAGAAATCTCTAAGCATCATCAATCAAACCTCACTCATTAGGGTCTTTGAGCATATCAGCAACATCAATCAAACCATATAATGTAACCCAAAGAAGAATATTAACATTAAAAGATGATGCTTAAAACAAGACAAAATAATCCACAAGAATGATGAAAAACAAGAGCATCAAACAAGGAAAATATTTATTTATTTATTTATTTATTATTCTTGTGGGTGCAAAAAGGGACAACATCAGGAATTGGAGAGGAAACAGCAAGAGTTTTGGCAAAAAGAGGAGTGAGAATAGTAATGGCAGCAAGGGACATGAAGAAGGCAGCAAAAGTGAAAGAGAGGATCAAAAGAGAAAGTCCAGAGGCAGAAATTTTAGTGTCAGAAATAGACCTCAGCTCTCTTGCTTCTGTTAGGAGGTTCTGTGTCGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATGTGAGTTTGTCTCTACTTTTCCCAACCAAAATCCCATTTTTCCCTCTCTAACTTCATCCCCTTTTTGGACACATTTTTGCCTTTTTGCAGAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAATTTGAATTGACATTTGCTACTAATTATTTGGGTAATTATTTTTCTTCTCATTCCTAAACTCAAACAGAGAAGACCAGTTTGATTGTAATATGTGAACACATGAAAAACATTCAAATAGATAGATGAATGTTAAAAGGGAAAATACCTGTGAAGCACCTGCATGTAAATTATATCAACTCTGGAAAGTTGGGAACTCCTTATAGCATCATTTGTAAGCAATGATTAAAATGAATTAGTTCTACAAAGTCAGAGAAACTTGATTTTACTTAATAATGGCTAAAGAAGAATGAAGTTATGTCAAATTTAGCATAAAAAAGGATACAAAATAATGCATTTCAAAATGTTGTTCTCTCTGTATAATTTACTCAAACAAGATAATTGGCAGTGTTTCAATCTGCGTGTCTCTTTGTTCCTGCAGGACATTACCTTCTGACAGAACTGCTTTTAGATAAATTGATAGAAACATCAAAGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTCTCCACGGGTGGGTGAAGAAGGATGATTTCTGCTTCAGTCACCTGCTCAACCCAAACAAGTTAGAAAAACTTGCACCACCCTCTTCTAAAGTATTTTCTTTTGGTCAATTACAAATTTCATCCTTCAATTTTAGGATAGTGTCTACTTGTTCTTTAAACTTTCAAAAAGCATCTAAGGGTCTTGCACCTACAATTTTGTGTTTAACAAATCCTTAAACTTTAAAATGTGTCTAATATGTCCTTAAACCTTAAAAAGTGTAATAGATCTTTAAACTTTCAATTTCATGTCCAATAAATTTTTGAAATTTCAATTTTGTGTTTAATAGATCAATGACTTATTCCTTATTTTTTAAACTTCATTGGACTGGTGGAAAAAAAATTGGAAGCTTAAAATTCTATCAAACATAAAATTAAAATTTATGACTAATTGATTGGATAATTTTGAATTTTAAAATAAATTGGAGACATGTTAAATACAAAATTCTAAGTTCAATAACTCATGAGTCATTTTTTAAAGTTCAAAAGGTATTAGTCACAAAACTAAAAGTTTGGGGACCAAACGGACACAAAAAAGTTCCTAAACTTGCAATTTGACTTCTTCGTTGAGTTCCATTCCTCAAAACACAAAAGGTTCTCTAGCTGGTTTCTGGTCAACAATCAGCCATGGTTAGAGAATCAAACTAATACCTGTTTGGGACTTCTGCAGATACAATGGCACGCGTGCTTATGCTCAGTCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGTTATCTTCCTTCTTCACCTTCTACATTTCCTGCAAAGAGTTAACAAAAACAGCCCACATTCTAAAATTCCAGCCATTTTTACAGGAAAGAGATGCCAATGTGACAATCAATGCAGTGCATCCAGGAATTGTGAAGACTGCAATTATCAGAGCACATCGAGGATTTATCACAGGCATGAACTATTTACTCTCTCATTTCTCCTTCAACCTAAAGGAAAATGCAGAAGAGGACATTGACTTATCATAACTATATTCTAACATCTTTTGCAGATTCTCTGTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGTATATTCATGAGTAAAAGCAGTTCAGAGGGTTTGGATTTGCCTAGGTTTTTTTTTTTTTTTTTTTTTCCTCCCATACAAACGGCTTGCTAGTAACAATTATTGCGGCTACAGGGTGCTGCTACAACATGCTATGTAGCTCTAAGTCCACAAACACAAAGAAAAACAGGAAAATATTTTGCAGATTGTAATGAAACTAAGTGTTCATCCGTGGCCAACGACGAGCTAGCAGCACGAACGCTATGGATGCAAACTCGTGCCCTAATTCTCAGAGAACTTGGTGAAGCAGCTCTAGCTACTTAA

mRNA sequence

ATGAAGGAGACTATTAGGTATTTGGTTGGAATAGCAGGGCCAAGTGGGTATGGCTCTAAAGCAAGTGCAGAGCAAGTTACTGAAACTTATCAGTTTTCTTCTCCTTTCACTGCCATTATCACTGGGACAACATCAGGAATTGGAGAGGAAACAGCAAGAGTTTTGGCAAAAAGAGGAGTGAGAATAGTAATGGCAGCAAGGGACATGAAGAAGGCAGCAAAAGTGAAAGAGAGGATCAAAAGAGAAAGTCCAGAGGCAGAAATTTTAGTGTCAGAAATAGACCTCAGCTCTCTTGCTTCTGTTAGGAGGTTCTGTGTCGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAATTTGAATTGACATTTGCTACTAATTATTTGGGACATTACCTTCTGACAGAACTGCTTTTAGATAAATTGATAGAAACATCAAAGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTCTCCACGGGTGGGTGAAGAAGGATGATTTCTGCTTCAGTCACCTGCTCAACCCAAACAAATACAATGGCACGCGTGCTTATGCTCAGTCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGAAAGAGATGCCAATGTGACAATCAATGCAGTGCATCCAGGAATTGTGAAGACTGCAATTATCAGAGCACATCGAGGATTTATCACAGATTCTCTGTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGGTGCTGCTACAACATGCTATGTAGCTCTAAGTCCACAAACACAAAGAAAAACAGGAAAATATTTTGCAGATTGTAATGAAACTAAGTGTTCATCCGTGGCCAACGACGAGCTAGCAGCACGAACGCTATGGATGCAAACTCGTGCCCTAATTCTCAGAGAACTTGGTGAAGCAGCTCTAGCTACTTAA

Coding sequence (CDS)

ATGAAGGAGACTATTAGGTATTTGGTTGGAATAGCAGGGCCAAGTGGGTATGGCTCTAAAGCAAGTGCAGAGCAAGTTACTGAAACTTATCAGTTTTCTTCTCCTTTCACTGCCATTATCACTGGGACAACATCAGGAATTGGAGAGGAAACAGCAAGAGTTTTGGCAAAAAGAGGAGTGAGAATAGTAATGGCAGCAAGGGACATGAAGAAGGCAGCAAAAGTGAAAGAGAGGATCAAAAGAGAAAGTCCAGAGGCAGAAATTTTAGTGTCAGAAATAGACCTCAGCTCTCTTGCTTCTGTTAGGAGGTTCTGTGTCGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAATTTGAATTGACATTTGCTACTAATTATTTGGGACATTACCTTCTGACAGAACTGCTTTTAGATAAATTGATAGAAACATCAAAGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTCTCCACGGGTGGGTGAAGAAGGATGATTTCTGCTTCAGTCACCTGCTCAACCCAAACAAATACAATGGCACGCGTGCTTATGCTCAGTCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGAAAGAGATGCCAATGTGACAATCAATGCAGTGCATCCAGGAATTGTGAAGACTGCAATTATCAGAGCACATCGAGGATTTATCACAGATTCTCTGTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGGTGCTGCTACAACATGCTATGTAGCTCTAAGTCCACAAACACAAAGAAAAACAGGAAAATATTTTGCAGATTGTAATGAAACTAAGTGTTCATCCGTGGCCAACGACGAGCTAGCAGCACGAACGCTATGGATGCAAACTCGTGCCCTAATTCTCAGAGAACTTGGTGAAGCAGCTCTAGCTACTTAA

Protein sequence

MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDELAARTLWMQTRALILRELGEAALAT
Homology
[Close]
BLAST of Clc01G13200 vs. NCBI nr
Match: XP_038895224.1 (short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 605.9 bits (1561), Expect = 2.1e-169
Identity = 309/327 (94.50%), Postives = 321/327 (98.17%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSKASAE+VTE++QFSSPFTAIITG TSGIGEETARVLAKRGV
Sbjct: 1   MKETLRYLVGIAGPSGYGSKASAEKVTESFQFSSPFTAIITGATSGIGEETARVLAKRGV 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYS+DKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSV+H 
Sbjct: 121 NGGVFSPNLEYSEDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVVHY 180

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVK++D CF HLLNPNKYNGTRAYAQSKLACILHAKEVAR+LKE+DANVTINAVHPGIVK
Sbjct: 181 WVKREDLCFIHLLNPNKYNGTRAYAQSKLACILHAKEVARKLKEQDANVTINAVHPGIVK 240

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCN+TKCSS
Sbjct: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNKTKCSS 300

Query: 301 VANDELAARTLWMQTRALILRELGEAA 328
           +ANDEL ARTLWMQTRALILRELGE A
Sbjct: 301 LANDELTARTLWMQTRALILRELGEPA 327

[Close]
BLAST of Clc01G13200 vs. NCBI nr
Match: XP_023000696.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 599.4 bits (1544), Expect = 1.9e-167
Identity = 306/325 (94.15%), Postives = 316/325 (97.23%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSK+SAEQVTE  Q SSP TAIITG TSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKRE PEAEILVSEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYSDDK ELTFATNYLGHYLLTELLLDKLIETS+RTGIQGRIINVSSV+H 
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVKKDD CF+HLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAII+AHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTG+YFADCNETKCSS
Sbjct: 254 TAIIKAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGRYFADCNETKCSS 313

Query: 301 VANDELAARTLWMQTRALILRELGE 326
           +ANDELAARTLWMQTRALILRELGE
Sbjct: 314 LANDELAARTLWMQTRALILRELGE 338

[Close]
BLAST of Clc01G13200 vs. NCBI nr
Match: XP_038895223.1 (short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 590.9 bits (1522), Expect = 6.9e-165
Identity = 309/355 (87.04%), Postives = 321/355 (90.42%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSKASAE+VTE++QFSSPFTAIITG TSGIGEETARVLAKRGV
Sbjct: 1   MKETLRYLVGIAGPSGYGSKASAEKVTESFQFSSPFTAIITGATSGIGEETARVLAKRGV 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYS+DKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSV+H 
Sbjct: 121 NGGVFSPNLEYSEDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVVHY 180

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK----------------- 240
           WVK++D CF HLLNPNKYNGTRAYAQSKLACILHAKEVAR+LK                 
Sbjct: 181 WVKREDLCFIHLLNPNKYNGTRAYAQSKLACILHAKEVARKLKVIFLLHLLHFLHRINKT 240

Query: 241 -----------ERDANVTINAVHPGIVKTAIIRAHRGFITDSLFFMASKLLKSIPQGAAT 300
                      E+DANVTINAVHPGIVKTAIIRAHRGFITDSLFFMASKLLKSIPQGAAT
Sbjct: 241 AHILRFQPFLQEQDANVTINAVHPGIVKTAIIRAHRGFITDSLFFMASKLLKSIPQGAAT 300

Query: 301 TCYVALSPQTQRKTGKYFADCNETKCSSVANDELAARTLWMQTRALILRELGEAA 328
           TCYVALSPQTQRKTGKYFADCN+TKCSS+ANDEL ARTLWMQTRALILRELGE A
Sbjct: 301 TCYVALSPQTQRKTGKYFADCNKTKCSSLANDELTARTLWMQTRALILRELGEPA 355

[Close]
BLAST of Clc01G13200 vs. NCBI nr
Match: XP_022924073.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 590.9 bits (1522), Expect = 6.9e-165
Identity = 301/325 (92.62%), Postives = 314/325 (96.62%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVG+AGPSGYGSK+SAEQVTE  Q SSP TAIITG TSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKR  PEAEIL+SEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYSDDK ELTFATNYLGHYLLTELLLDKLIETS+RTGIQGRIINVSSV+H 
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVKKDD CF+HLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAII+AHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQT RKTG+YFADCNETKCSS
Sbjct: 254 TAIIKAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSS 313

Query: 301 VANDELAARTLWMQTRALILRELGE 326
           +ANDELAARTLW+QTRALILRELGE
Sbjct: 314 LANDELAARTLWIQTRALILRELGE 338

[Close]
BLAST of Clc01G13200 vs. NCBI nr
Match: XP_023519347.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.1 bits (1520), Expect = 1.2e-164
Identity = 300/325 (92.31%), Postives = 314/325 (96.62%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSK+SAEQVTE  Q SSP TAIITG TSGIGEETARVLAKRG+
Sbjct: 1   MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGM 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVKERIKRE PEAEILVSEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYSDDK ELTFATNYLGHY++TELLLDKLIETSKRTGIQGRIINVSSV+H 
Sbjct: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYIMTELLLDKLIETSKRTGIQGRIINVSSVVHC 180

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVKKDD CF+HLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK
Sbjct: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAI++AHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQT+RKTG+YFADCNETKCSS
Sbjct: 241 TAILKAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTRRKTGRYFADCNETKCSS 300

Query: 301 VANDELAARTLWMQTRALILRELGE 326
           +ANDELAAR LW+QTRALILREL E
Sbjct: 301 LANDELAARKLWIQTRALILRELDE 325

[Close]
BLAST of Clc01G13200 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-71
Identity = 148/305 (48.52%), Postives = 202/305 (66.23%), Query Frame = 0 

Query: 8   LVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGVRIVMAAR 67
           + G AG SGYGS ++AE VT +   +   TAIITG TSGIG E ARVL  RG  +++A+R
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHSID-AKHLTAIITGGTSGIGLEAARVLGMRGAHVIIASR 66

Query: 68  DMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSP 127
           + K A   KE I +  P A I   ++DLSS+ SVR F  +F AL +PLNILINN GV   
Sbjct: 67  NTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVMFC 126

Query: 128 NLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDDF 187
             + S+D  E  FATN++GH+LLT LLLDK+  +++ +GI+GRI+N+SS+ H +   +  
Sbjct: 127 PFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTEGI 186

Query: 188 CFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIRAH 247
            F ++ +P++Y+  +AY QSKLA +LH+  ++R+L+E   N+TIN+VHPG++ T + R H
Sbjct: 187 MFDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTNLFR-H 246

Query: 248 RGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDELA 307
            G     L  M+  L K+IPQGAATTCYVAL P  +  TGKYFADCN T  S+ A D   
Sbjct: 247 SGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKDVTGKYFADCNVTTPSNFAIDTTL 306

Query: 308 ARTLW 313
           A  LW
Sbjct: 307 ADKLW 309

[Close]
BLAST of Clc01G13200 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.7e-71
Identity = 148/305 (48.52%), Postives = 201/305 (65.90%), Query Frame = 0 

Query: 8   LVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGVRIVMAAR 67
           + G AG SGYGS ++AE VT +   +   TAIITG TSGIG E ARVL  RG  +++AAR
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHSID-AKHLTAIITGGTSGIGLEAARVLGMRGAHVIIAAR 66

Query: 68  DMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSP 127
           + K A   KE I +  P A I   ++DLSS+ SVR F  +F AL +PLNILINN GV   
Sbjct: 67  NTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVMFC 126

Query: 128 NLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDDF 187
             + S+D  E  FATN++GH+LLT LLLDK+  +++ +GI+GRI+N+SS+ H +   +  
Sbjct: 127 PFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTEGI 186

Query: 188 CFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIRAH 247
            F ++ +P++Y+  +AY QSKLA +LH+  ++R+L+E   N+TIN+VHPG++ T + R H
Sbjct: 187 MFDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTNLFR-H 246

Query: 248 RGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDELA 307
            G     L  M+  L K+IPQGAATTCYVAL P  +  TGKYF DCN T  S+ A D   
Sbjct: 247 SGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKGVTGKYFTDCNVTTPSNFAIDTTL 306

Query: 308 ARTLW 313
           A  LW
Sbjct: 307 ADKLW 309

[Close]
BLAST of Clc01G13200 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.6e-68
Identity = 142/321 (44.24%), Postives = 206/321 (64.17%), Query Frame = 0 

Query: 7   YLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGVRIVMAA 66
           +  G  G SG+ S+++AE+VT      +  TAI+TG +SGIG ETARVL+ RGV +VMA 
Sbjct: 2   WFFGSKGASGFSSRSTAEEVTHGVD-GTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 61

Query: 67  RDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFS 126
           R+    AKVKE I ++ P A++ V E+DLSS+ SVR+F  E+ + GLPLN+LINN G+ +
Sbjct: 62  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 121

Query: 127 PNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDD 186
                S D  EL FATN+LGH+LLT+LLLD +  TS+ +  +GRI+N+SS  H +   + 
Sbjct: 122 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 181

Query: 187 FCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIRA 246
             F  + + + Y+  RAY QSKL  +LHA E+ +QLKE   N+T N++HPG + T + R 
Sbjct: 182 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 241

Query: 247 HRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDEL 306
              ++  ++  +A  +LKS+PQGAATTCYVAL+PQ    +G+YF D N  K   +  D  
Sbjct: 242 FNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTE 301

Query: 307 AARTLWMQTRALILRELGEAA 328
            A+ +W  +  L   + GE++
Sbjct: 302 LAKKVWDFSTKLTDSQSGESS 321

[Close]
BLAST of Clc01G13200 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 9.3e-64
Identity = 131/300 (43.67%), Postives = 190/300 (63.33%), Query Frame = 0 

Query: 13  GPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGVRIVMAARDMKKA 72
           G SG+   ++AEQVT     ++  TAI+TG +SGIG ET RVLA RG  ++M  R+M  A
Sbjct: 9   GVSGFSGSSTAEQVTHGID-ATGLTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAA 68

Query: 73  AKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPNLEYS 132
             VK+ I ++ P A++   E+DLSSL SV++F  EF + G PLNILINN G+ +   + S
Sbjct: 69  KDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFKLS 128

Query: 133 DDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDDFCFSHL 192
            D  EL FATN++GH+LLT LLLD + +T++ +  +GRI+NV+S  H +   +   F  +
Sbjct: 129 KDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKI 188

Query: 193 LNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIRAHRGFIT 252
            + + YN  RAY QSKLA +LHA ++ + LKE   N+T N++HPG + T + R H   + 
Sbjct: 189 NDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFR-HNSAVN 248

Query: 253 DSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDELAARTLW 312
             +  +   +LK++ QGAATTCYVAL PQ +  +G+YF+D N  K +    D   A+ LW
Sbjct: 249 GLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVDLAKKLW 306

[Close]
BLAST of Clc01G13200 vs. ExPASy Swiss-Prot
Match: Q9HBH5 (Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.9e-43
Identity = 113/291 (38.83%), Postives = 163/291 (56.01%), Query Frame = 0 

Query: 37  TAIITGTTSGIGEETARVLAKRGVRIVMAARDMKKAAKVKERIKRESPEA---------- 96
           T +ITG  SG+G  TA  L + G R++M  RD  +A +   +++RE  +A          
Sbjct: 45  TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVS 104

Query: 97  ---EILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPNLEYSDDKFELTFATN 156
              E++V E+DL+SL SVR FC E       L++LINN G+F      ++D FE+ F  N
Sbjct: 105 GVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVN 164

Query: 157 YLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDDFCFSHLLNPNKYNGTRA 216
           +LGH+LLT LLL  L     ++    RI+ VSS L+   K  D  F  L +   YN +  
Sbjct: 165 HLGHFLLTNLLLGLL-----KSSAPSRIVVVSSKLY---KYGDINFDDLNSEQSYNKSFC 224

Query: 217 YAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIR-AHRGFITDSLFFMAS-K 276
           Y++SKLA IL  +E+AR+L+    NVT+N +HPGIV+T + R  H   +   LF + S  
Sbjct: 225 YSRSKLANILFTRELARRLE--GTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWA 284

Query: 277 LLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDELAARTLW 313
             K+  +GA T+ Y+A SP+ +  +G+YF DC E +    A DE  AR LW
Sbjct: 285 FFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLW 325

[Close]
BLAST of Clc01G13200 vs. ExPASy TrEMBL
Match: A0A6J1KGJ5 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111495058 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.4e-168
Identity = 306/325 (94.15%), Postives = 316/325 (97.23%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSK+SAEQVTE  Q SSP TAIITG TSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKRE PEAEILVSEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYSDDK ELTFATNYLGHYLLTELLLDKLIETS+RTGIQGRIINVSSV+H 
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVKKDD CF+HLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAII+AHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTG+YFADCNETKCSS
Sbjct: 254 TAIIKAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGRYFADCNETKCSS 313

Query: 301 VANDELAARTLWMQTRALILRELGE 326
           +ANDELAARTLWMQTRALILRELGE
Sbjct: 314 LANDELAARTLWMQTRALILRELGE 338

[Close]
BLAST of Clc01G13200 vs. ExPASy TrEMBL
Match: A0A6J1EBB9 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111431615 PE=3 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.3e-165
Identity = 301/325 (92.62%), Postives = 314/325 (96.62%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYLVG+AGPSGYGSK+SAEQVTE  Q SSP TAIITG TSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKR  PEAEIL+SEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           NGGVFSPNLEYSDDK ELTFATNYLGHYLLTELLLDKLIETS+RTGIQGRIINVSSV+H 
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVKKDD CF+HLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAII+AHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQT RKTG+YFADCNETKCSS
Sbjct: 254 TAIIKAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSS 313

Query: 301 VANDELAARTLWMQTRALILRELGE 326
           +ANDELAARTLW+QTRALILRELGE
Sbjct: 314 LANDELAARTLWIQTRALILRELGE 338

[Close]
BLAST of Clc01G13200 vs. ExPASy TrEMBL
Match: A0A6J1C5L3 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111008680 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.2e-156
Identity = 287/329 (87.23%), Postives = 307/329 (93.31%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           MKET+RYL GIAG SGYGSK++AEQVT+   FSSP TAIITG TSGIGEETARV+AKRGV
Sbjct: 1   MKETLRYLAGIAGQSGYGSKSTAEQVTQHSHFSSPLTAIITGATSGIGEETARVMAKRGV 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIV+AARD+KKAAKVKERIKRES EAEILVSEIDLSSLASVRRFCV+FAA GLPLNILIN
Sbjct: 61  RIVIAARDLKKAAKVKERIKRESAEAEILVSEIDLSSLASVRRFCVDFAASGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           N GVFSPNLEYSDDKFELTFATNYLGHYLLTE+LLD LIETSKRTGIQGRIINVSSV+H 
Sbjct: 121 NAGVFSPNLEYSDDKFELTFATNYLGHYLLTEMLLDNLIETSKRTGIQGRIINVSSVVHC 180

Query: 181 WVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240
           WVKKD  CF+HLLNPNKYN T AYAQSKLACILHAKEVARQLKER ANVT+NA+HPGIVK
Sbjct: 181 WVKKDGLCFTHLLNPNKYNATLAYAQSKLACILHAKEVARQLKERAANVTVNALHPGIVK 240

Query: 241 TAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSS 300
           TAIIRAH GFITDSLFFMASKLLKSIPQGAATTCYVAL+PQT+RKTGKYF+DCNETKCS+
Sbjct: 241 TAIIRAHGGFITDSLFFMASKLLKSIPQGAATTCYVALNPQTERKTGKYFSDCNETKCSA 300

Query: 301 VANDELAARTLWMQTRALILRELGEAALA 330
           +AN+ELAAR LWMQTRALI R+LGE A A
Sbjct: 301 LANNELAARKLWMQTRALIHRQLGETASA 329

[Close]
BLAST of Clc01G13200 vs. ExPASy TrEMBL
Match: A0A6J1JJF7 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485650 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.8e-132
Identity = 248/327 (75.84%), Postives = 283/327 (86.54%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFS--SPFTAIITGTTSGIGEETARVLAKR 60
           MK+T+RYL GIAGPSGYGSK++AEQVT+   FS  S  TAIITG TSGIG ETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNIL 120
           GVRIVM ARDMKKAA+VKE I+RESPEAEI+V EIDLSSLASV+ FC  F AL LPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVL 180
           INN GVFS NLE+S+DK ELTFATNYLGHY LTE LL+K+IET+ +TGI+GRIINVSSV+
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAQTGIEGRIINVSSVV 196

Query: 181 HGWVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGI 240
           HGWVKKD   F  +LNPN YNGTRAYAQSKLA ILHAKEV+RQL+ R+A VTINAVHPGI
Sbjct: 197 HGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKC 300
           VKTAIIRAH+GFITDSLFFMASKLLK+  QGA+TTCYVALS QT+ K+GK++ADCNET C
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

Query: 301 SSVANDELAARTLWMQTRALILRELGE 326
           SS+ANDE+ A+ LW +TR LI ++L +
Sbjct: 317 SSLANDEIEAQKLWTRTRNLINKQLSK 343

[Close]
BLAST of Clc01G13200 vs. ExPASy TrEMBL
Match: A0A6J1E617 (short-chain dehydrogenase TIC 32, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429765 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.8e-132
Identity = 248/327 (75.84%), Postives = 283/327 (86.54%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFS--SPFTAIITGTTSGIGEETARVLAKR 60
           MK+T+RYL GIAGPSGYGSK++AEQVT+   FS  S  TAIITG TSGIG ETARVLAKR
Sbjct: 17  MKDTLRYLAGIAGPSGYGSKSTAEQVTQCSSFSSTSQLTAIITGATSGIGAETARVLAKR 76

Query: 61  GVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNIL 120
           GVRIVM ARDMKKAA+VKE I+RESPEAEI+V EIDLSSLASV+ FC  F AL LPLNIL
Sbjct: 77  GVRIVMPARDMKKAAQVKEAIQRESPEAEIIVCEIDLSSLASVQSFCNHFLALRLPLNIL 136

Query: 121 INNGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVL 180
           INN GVFS NLE+S+DK ELTFATNYLGHY LTE LL+K+IET+ +TGI+GRIIN+SSV+
Sbjct: 137 INNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETATKTGIEGRIINISSVV 196

Query: 181 HGWVKKDDFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGI 240
           HGWVKKD   F  +LNPN YNGTRAYAQSKLA ILHAKEV+RQL+ R+A VTINAVHPGI
Sbjct: 197 HGWVKKDGLNFGQMLNPNNYNGTRAYAQSKLANILHAKEVSRQLQGRNARVTINAVHPGI 256

Query: 241 VKTAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKC 300
           VKTAIIRAH+GFITDSLFFMASKLLK+  QGA+TTCYVALS QT+ K+GK++ADCNET C
Sbjct: 257 VKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNC 316

Query: 301 SSVANDELAARTLWMQTRALILRELGE 326
           SS+ANDEL A+ LW +TR LI ++L +
Sbjct: 317 SSLANDELEAQKLWTRTRNLINKQLSK 343

[Close]
BLAST of Clc01G13200 vs. TAIR 10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-123
Identity = 229/327 (70.03%), Postives = 275/327 (84.10%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQF-SSPFTAIITGTTSGIGEETARVLAKRG 60
           MK T+RYL GIAGP+G+GS+++AEQVT+   F  S  TAIITG TSGIG ETARVLAKRG
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRG 60

Query: 61  VRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILI 120
           VR+VMA RDMKKA  VKERI RE+PEA+I++ EIDLSSL+SV RFC +F +  LPLNILI
Sbjct: 61  VRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILI 120

Query: 121 NNGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLH 180
           NN GVFSPNLE+S++K ELTFATN+LGHYLLTE+L++K+I+T++++GI+GRIIN+SSV+H
Sbjct: 121 NNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIH 180

Query: 181 GWVKKDDFCFSHLLNP-NKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGI 240
            WVK D F F  LL+P ++YNGTRAYAQSKLA ILHAK +++QLK+R+ANVTINAVHPGI
Sbjct: 181 NWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGI 240

Query: 241 VKTAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKC 300
           VKT IIRAH+G  TDSLF +ASKLLKSI QGAATTCYVALS +T+  +GKYFADCNET C
Sbjct: 241 VKTGIIRAHKGLFTDSLFLIASKLLKSISQGAATTCYVALSNETKGLSGKYFADCNETNC 300

Query: 301 SSVANDELAARTLWMQTRALILRELGE 326
           S +ANDE  A  L  Q+RALI   L E
Sbjct: 301 SDLANDEYVALKLCTQSRALIHDHLHE 327

[Close]
BLAST of Clc01G13200 vs. TAIR 10
Match: AT5G50130.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 373.2 bits (957), Expect = 2.1e-103
Identity = 192/270 (71.11%), Postives = 233/270 (86.30%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQF-SSPFTAIITGTTSGIGEETARVLAKRG 60
           MK T+RYL GIAGP+G+GS+++AEQVT+   F  S  TAIITG TSGIG ETARVLAKRG
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRG 60

Query: 61  VRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILI 120
           VR+VMA RDMKKA  VKERI RE+PEA+I++ EIDLSSL+SV RFC +F +  LPLNILI
Sbjct: 61  VRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILI 120

Query: 121 NNGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLH 180
           NN GVFSPNLE+S++K ELTFATN+LGHYLLTE+L++K+I+T++++GI+GRIIN+SSV+H
Sbjct: 121 NNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIH 180

Query: 181 GWVKKDDFCFSHLLNP-NKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGI 240
            WVK D F F  LL+P ++YNGTRAYAQSKLA ILHAK +++QLK+R+ANVTINAVHPGI
Sbjct: 181 NWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGI 240

Query: 241 VKTAIIRAHRGFITDSLFFMASKLLKSIPQ 269
           VKT IIRAH+G  TDSLF +ASKLLKSI Q
Sbjct: 241 VKTGIIRAHKGLFTDSLFLIASKLLKSISQ 270

[Close]
BLAST of Clc01G13200 vs. TAIR 10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 334.7 bits (857), Expect = 8.3e-92
Identity = 176/321 (54.83%), Postives = 226/321 (70.40%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           M ET+++L+G  GPSG+GS+++A+ VT      S  TAIITG TSGIG ETARVLAKRG 
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRS-LTAIITGATSGIGAETARVLAKRGA 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           R+V+ AR +K A + K RI  E P+AEI+V  +DLSSL SVRRF  +F +L LPLNILIN
Sbjct: 61  RLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           N G ++     S+D  E+TFATNYLGH+LLT+LLL K+IET+ +TG+QGRI+NV+SV+H 
Sbjct: 121 NAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHS 180

Query: 181 WVKKD--DFCFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGI 240
           W   D   +      N   Y+ TRAYA SKLA +LH  E++R L + DANVT N VHPGI
Sbjct: 181 WFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGI 240

Query: 241 VKTAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKC 300
           VKT + R   G +TD +FF+ SKLLKS+PQ AATTCYVA SP+ +   GKYF+DCNE + 
Sbjct: 241 VKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEARS 300

Query: 301 SSVANDELAARTLWMQTRALI 320
           S   +  L A+ LW  +  L+
Sbjct: 301 SKSGSCNLKAQRLWTASDLLV 320

[Close]
BLAST of Clc01G13200 vs. TAIR 10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-91
Identity = 171/321 (53.27%), Postives = 231/321 (71.96%), Query Frame = 0 

Query: 1   MKETIRYLVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGV 60
           M ET +YL+G AG SG+GSK++AE+VTE     S  TA+ITG TSGIG ETARVLAKRG 
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRS-ITAVITGATSGIGAETARVLAKRGA 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           R++  AR++K A + KERI  E PE EI+V ++DLSS+ASVR F  +F +L LPLN+LIN
Sbjct: 61  RLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHG 180
           N G  +     S+D  E+TFATNYLGH+LLT LLL+K+I+T++ TG+QGRI+NV+S +HG
Sbjct: 121 NAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHG 180

Query: 181 WVKKDDFCFSHLLNPNK--YNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGI 240
           W   D   +  L++  K  ++ TRAYA SKLA +LH KE++ +L++  ANVT+N VHPG+
Sbjct: 181 WFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGV 240

Query: 241 VKTAIIRAHRGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKC 300
           V+T + R   G +TD +FF+ASKL+K++PQ AATTCYVA +P+    +GKYF DCNET  
Sbjct: 241 VRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTP 300

Query: 301 SSVANDELAARTLWMQTRALI 320
           S +  +   A  LW  +  L+
Sbjct: 301 SGLGTNSSEATKLWAASEILV 320

[Close]
BLAST of Clc01G13200 vs. TAIR 10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 281.6 bits (719), Expect = 8.3e-76
Identity = 151/305 (49.51%), Postives = 205/305 (67.21%), Query Frame = 0 

Query: 8   LVGIAGPSGYGSKASAEQVTETYQFSSPFTAIITGTTSGIGEETARVLAKRGVRIVMAAR 67
           + G  GPSG+GS ++AE+VT+    ++  TAIITG T GIG ETARVL+KRG  +V+ AR
Sbjct: 7   ITGRRGPSGFGSASTAEEVTQGID-ATNLTAIITGGTGGIGMETARVLSKRGAHVVIGAR 66

Query: 68  DMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSP 127
           +M  A   K  I R++  A + + ++DLSS+ S++ F  EF AL LPLN+LINN GV   
Sbjct: 67  NMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFC 126

Query: 128 NLEYSDDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVLHGWVKKDDF 187
             + S+D  EL FATN++GH+LLT LLLD +  T+K +G++GRI+NVSSV H +  ++  
Sbjct: 127 PYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGI 186

Query: 188 CFSHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVKTAIIRAH 247
            F  + +   Y+  RAY QSKLA ILHA E++RQL+E   N+T N+VHPG++ T + + H
Sbjct: 187 QFDSINDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNLFQ-H 246

Query: 248 RGFITDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSVANDELA 307
              +   L F +  L K+IPQGAATTCYVAL P  +  TGKYFADCNE   S +A DE  
Sbjct: 247 TALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETL 306

Query: 308 ARTLW 313
           A+ LW
Sbjct: 307 AQKLW 309

The following BLAST results are available for this feature:
BLAST of Clc01G13200 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895224.12.1e-16994.50short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X2 [Benincasa his... [more]
XP_023000696.11.9e-16794.15short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima][more]
XP_038895223.16.9e-16587.04short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X1 [Benincasa his... [more]
XP_022924073.16.9e-16592.62short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata][more]
XP_023519347.11.2e-16492.31short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Clc01G13200 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A0A078IS662.1e-7148.52Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T... [more]
A0A078ISJ62.7e-7148.52Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T... [more]
A2RVM01.6e-6844.24Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
Q6RVV49.3e-6443.67Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3... [more]
Q9HBH56.9e-4338.83Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1[more]
BLAST of Clc01G13200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KGJ59.4e-16894.15short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1EBB93.3e-16592.62short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=36... [more]
A0A6J1C5L32.2e-15687.23short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3... [more]
A0A6J1JJF72.8e-13275.84short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita max... [more]
A0A6J1E6172.8e-13275.84short-chain dehydrogenase TIC 32, chloroplastic isoform X1 OS=Cucurbita moschata... [more]
BLAST of Clc01G13200 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G50130.11.1e-12370.03NAD(P)-binding Rossmann-fold superfamily protein [more]
AT5G50130.22.1e-10371.11NAD(P)-binding Rossmann-fold superfamily protein [more]
AT1G64590.18.3e-9254.83NAD(P)-binding Rossmann-fold superfamily protein [more]
AT4G24050.11.8e-9153.27NAD(P)-binding Rossmann-fold superfamily protein [more]
AT5G02540.18.3e-7649.51NAD(P)-binding Rossmann-fold superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 169..177
score: 61.15
coord: 204..223
score: 26.08
coord: 113..124
score: 38.63
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 163..179
score: 32.28
coord: 204..223
score: 27.97
coord: 227..244
score: 33.16
coord: 37..54
score: 42.87
coord: 113..124
score: 39.38
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 37..177
e-value: 2.3E-26
score: 92.5
NoneNo IPR availableGENE3D3.40.50.720coord: 33..322
e-value: 1.6E-71
score: 242.8
NoneNo IPR availablePANTHERPTHR24320RETINOL DEHYDROGENASEcoord: 4..323
NoneNo IPR availablePANTHERPTHR24320:SF198NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 4..323
NoneNo IPR availableCDDcd05327retinol-DH_like_SDR_c_likecoord: 37..312
e-value: 1.07166E-90
score: 270.25
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 37..297

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G13200.2Clc01G13200.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity