Clc01G13060 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G13060
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
Location	ClcChr01: 24863728 .. 24865729 (-)
RNA-Seq Expression	Clc01G13060
Synteny	Clc01G13060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTAGCTGAGAAATCCGAAGAAACGGCGTCAACTGTAAGAATTTCTCTCTTACAATTAACATTTCTCCGTCTTTGACAATTTATCATCAGAAGGCTGTTTCTTTTGCGATCATTCAGCATTGCCCTTTTATTGAATTAGGTTTTTCTTTATAATGATTTTGAGTAATTTGCGTTTACTGATGATTCACTGGGTCTAGAACCGCCTTTTCTCATCGCTCACTTCATCAATGTTCATTTAACCAGAGTACTAAAAAATTGCCCGGAACGGTGAACTGGGGTACGGCAACAACTATTGGAGTGTTTGCAGGCATGTTTTATGGAGGAAGCAAAGAAGCGGCCGCTTCGGTGGTAAGTTAATTTTGTGTGAACATATATATATCCCTAATGTTCTATTGTAATTGAATTTTCAAAGTTGGGAAGTTTTTCTTTTCTCTTGCTGCTTGGATGATTTAAAGTTGTGAAGAAATGATACAACGATGGGATAGTGTGAATGAAAATTTGTTCCCCTTGATCTCATTATTCATTCCAACCTCAGGTTCGTTTGTTATGTAAATATTTTGAGGGTGTTAATTTGAATGATTTCATGGAAGCTTCAGAATTGATCATTAAATGTATTAAGAGTAGTGAGTAATTCTAGTATTGCATAAATGTCATGACAACAAATGATGATTGCATCTGCTCAAGAGAATACGCTCGAAAGTTGTAGATCACGGGAAACCAAAAGGGTAGACAGTAGACTTCTTTTATCCATATAAGGTTTTCATGGTAGTAGACTTCTCTTTTATGACAAGTGTACATAAGGTTTTTTATTTGTTAATTGAACCTAACTTCTTTCATGAGTTTTCAAACAAATATAAATAAGGAAAACAGGGCTTCTATCATTTTAATGCCTTTAACTTTTTGCTTCTGAATCCATGGCTATAAGAGAAAGAAGAGGGAAAGAAATAAACGGTTTAGACAAATACTTGGAGATGTTAAATGTAGAAATGCCAGTTGCACCGCATATACTCAGTATCTTTTGCAATTTGCCTTTCTGAAAAGACTCACCTTTAATAACATTAAAATTTTCCAACTGGATGAAATTTGAGAGTACTATGACAATTGGCAGAGTAAGGATGCAGAAGTTACATTGAAGCTTGGTAGCACACCTGACAAGCGTGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCCGAGTTACACGAGGCTCAATAGTTGGTGGTGTGCGCCTTGGGATGTTTACAGCTGCATTCTATGGTCTACAAAATCTTCTAGCTGAGAAGCGTGGTGTACATGATGTCTTAAATGTTGCTGCAGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATGTAAGTAATACTAATGCGAATAATTTGTTTGCTCACTTGTTATCCCTTGGATCTAATTGCATCGGGTTATTCCTTATCTTAAGTTTTATCAATTTTTACTTTGAAGCTTGGGGCAGCTTAAGTTTGAAGATGTGAACAACAGAGTTGTATCAAATACTTAAACATGCAGCTGCAACTTAACTTATTTTGTTATTTGGCTTACTGTAACAGTGCCAGGATCACTCAAGTGGCGCGCAAGGAATGTAGCATTGGGATCTGTCCTAGGTGCAGCATTTTGCTTCCCTCTTGGTAATGGTCTATTCATTTTTCTTTCTCTTCAAAATTATATGGATGCTGTGATCTTTTATAGGATGGTTTTAGGAATCTTTTCTACATGAAAATTCCCTCAATCATAAGAACTTTTTCAAGTATGAACAACAAAGAGGAAAAAGTGGTGGTTAAGTTTGTTAGAAAGCGTTGGACGCCTGTTACTAAAGAGACATTGCGATGACAGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGTAATGAAGCGCTTGCTTATACCAATACAGTTCAAAAGGGAGAATCAAAGAGTGGTGTCGGTGCTGCTATTGAGAGATTTGAAGAAAACTTGAAGAAGTAG

mRNA sequence

ATGGAAGTAGCTGAGAAATCCGAAGAAACGGCGTCAACTAGTACTAAAAAATTGCCCGGAACGGTGAACTGGGGTACGGCAACAACTATTGGAGTGTTTGCAGGCATGTTTTATGGAGGAAGCAAAGAAGCGGCCGCTTCGGTGAGTAAGGATGCAGAAGTTACATTGAAGCTTGGTAGCACACCTGACAAGCGTGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCCGAGTTACACGAGGCTCAATAGTTGGTGGTGTGCGCCTTGGGATGTTTACAGCTGCATTCTATGGTCTACAAAATCTTCTAGCTGAGAAGCGTGGTGTACATGATGTCTTAAATGTTGCTGCAGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCAGGATCACTCAAGTGGCGCGCAAGGAATGTAGCATTGGGATCTGTCCTAGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGTAATGAAGCGCTTGCTTATACCAATACAGTTCAAAAGGGAGAATCAAAGAGTGGTGTCGGTGCTGCTATTGAGAGATTTGAAGAAAACTTGAAGAAGTAG

Coding sequence (CDS)

ATGGAAGTAGCTGAGAAATCCGAAGAAACGGCGTCAACTAGTACTAAAAAATTGCCCGGAACGGTGAACTGGGGTACGGCAACAACTATTGGAGTGTTTGCAGGCATGTTTTATGGAGGAAGCAAAGAAGCGGCCGCTTCGGTGAGTAAGGATGCAGAAGTTACATTGAAGCTTGGTAGCACACCTGACAAGCGTGAACAATATAGATTAATCAGAGATGCAATGGAGAAAAGATTTATCCGAGTTACACGAGGCTCAATAGTTGGTGGTGTGCGCCTTGGGATGTTTACAGCTGCATTCTATGGTCTACAAAATCTTCTAGCTGAGAAGCGTGGTGTACATGATGTCTTAAATGTTGCTGCAGCTGGTTCTGCCACAGCTGCTACATTTGGTCTAATATTGCCAGGATCACTCAAGTGGCGCGCAAGGAATGTAGCATTGGGATCTGTCCTAGGTGCAGCATTTTGCTTCCCTCTTGGTTGGCTTCATTTAAAGCTTGTAGAGAAAGCAAATGAAGGTAATGAAGCGCTTGCTTATACCAATACAGTTCAAAAGGGAGAATCAAAGAGTGGTGTCGGTGCTGCTATTGAGAGATTTGAAGAAAACTTGAAGAAGTAG

Protein sequence

MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGSTPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVAAAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYTNTVQKGESKSGVGAAIERFEENLKK

Homology

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BLAST of Clc01G13060 vs. NCBI nr
Match: XP_038893751.1 (uncharacterized protein LOC120082584 [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 199/205 (97.07%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKR VHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRAVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEAL Y 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALGYP 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           N VQKGESKSGVGAAIERFEENL K
Sbjct: 181 NKVQKGESKSGVGAAIERFEENLNK 205

[Close]

BLAST of Clc01G13060 vs. NCBI nr
Match: XP_004152481.1 (uncharacterized protein LOC101204093 [Cucumis sativus] >KGN64318.1 hypothetical protein Csa_013422 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 196/205 (95.61%), Postives = 201/205 (98.05%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEVAE+SEET STSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANEGNEAL YT
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQ+G+SKSGVGAAIERFEENL K
Sbjct: 181 NTVQEGKSKSGVGAAIERFEENLNK 205

[Close]

BLAST of Clc01G13060 vs. NCBI nr
Match: XP_008438544.1 (PREDICTED: uncharacterized protein LOC103483606 [Cucumis melo] >KAA0055237.1 Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 [Cucumis melo var. makuwa] >TYJ99164.1 Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 [Cucumis melo var. makuwa])

HSP 1 Score: 377.9 bits (969), Expect = 5.7e-101
Identity = 194/205 (94.63%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEVAE+SEET STSTKKLPGTVNWGTATTI VFAGM YGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIAVFAGMLYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANEGNEAL YT
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQKG+SKSGVGAAIERFEEN+ K
Sbjct: 181 NTVQKGKSKSGVGAAIERFEENMNK 205

[Close]

BLAST of Clc01G13060 vs. NCBI nr
Match: XP_022136982.1 (uncharacterized protein LOC111008556 [Momordica charantia])

HSP 1 Score: 370.9 bits (951), Expect = 6.9e-99
Identity = 192/205 (93.66%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME AEKSEETAS+ T KLPG VNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEAAEKSEETASSGTNKLPGMVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFG+ILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGN+ALAY 
Sbjct: 121 AAGSATAATFGVILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNQALAYP 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQKGESKSGVGAAIER  E+L K
Sbjct: 181 NTVQKGESKSGVGAAIERLGESLNK 205

[Close]

BLAST of Clc01G13060 vs. NCBI nr
Match: XP_022954601.1 (uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothetical protein SDJN02_25004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.5 bits (942), Expect = 7.7e-98
Identity = 189/205 (92.20%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME  EKSEET S  TKKLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEKANEGNEALAY 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           + +QKGESKSGVGAAIER EE+L K
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

[Close]

BLAST of Clc01G13060 vs. ExPASy TrEMBL
Match: A0A0A0LR90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 196/205 (95.61%), Postives = 201/205 (98.05%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEVAE+SEET STSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANEGNEAL YT
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQ+G+SKSGVGAAIERFEENL K
Sbjct: 181 NTVQEGKSKSGVGAAIERFEENLNK 205

[Close]

BLAST of Clc01G13060 vs. ExPASy TrEMBL
Match: A0A5A7UKY0 (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003720 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 194/205 (94.63%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEVAE+SEET STSTKKLPGTVNWGTATTI VFAGM YGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIAVFAGMLYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANEGNEAL YT
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQKG+SKSGVGAAIERFEEN+ K
Sbjct: 181 NTVQKGKSKSGVGAAIERFEENMNK 205

[Close]

BLAST of Clc01G13060 vs. ExPASy TrEMBL
Match: A0A1S3AWM6 (uncharacterized protein LOC103483606 OS=Cucumis melo OX=3656 GN=LOC103483606 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 194/205 (94.63%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           MEVAE+SEET STSTKKLPGTVNWGTATTI VFAGM YGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEVAEESEETPSTSTKKLPGTVNWGTATTIAVFAGMLYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+GSVLGAAFCFPLGW+HLKLVEKANEGNEAL YT
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGSVLGAAFCFPLGWIHLKLVEKANEGNEALGYT 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQKG+SKSGVGAAIERFEEN+ K
Sbjct: 181 NTVQKGKSKSGVGAAIERFEENMNK 205

[Close]

BLAST of Clc01G13060 vs. ExPASy TrEMBL
Match: A0A6J1C6Y4 (uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008556 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.4e-99
Identity = 192/205 (93.66%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME AEKSEETAS+ T KLPG VNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEAAEKSEETASSGTNKLPGMVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFG+ILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGN+ALAY 
Sbjct: 121 AAGSATAATFGVILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNQALAYP 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           NTVQKGESKSGVGAAIER  E+L K
Sbjct: 181 NTVQKGESKSGVGAAIERLGESLNK 205

[Close]

BLAST of Clc01G13060 vs. ExPASy TrEMBL
Match: A0A6J1GRB7 (uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC111456818 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98
Identity = 189/205 (92.20%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME  EKSEET S  TKKLPGTVNWGTATTI VFAGMFYGGSKEAAASVSKDAEVTLKLGS
Sbjct: 1   MEATEKSEETVSNVTKKLPGTVNWGTATTIAVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDV NVA
Sbjct: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVFNVA 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
           AAGSATAATFGLILPGSLKWRARNVA+G+VLGAAFCFPLGWLHLKLVEKANEGNEALAY 
Sbjct: 121 AAGSATAATFGLILPGSLKWRARNVAMGAVLGAAFCFPLGWLHLKLVEKANEGNEALAYP 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           + +QKGESKSGVGAAIER EE+L K
Sbjct: 181 SAIQKGESKSGVGAAIERLEESLNK 205

[Close]

BLAST of Clc01G13060 vs. TAIR 10
Match: AT5G63000.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-76
Identity = 145/205 (70.73%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MEVAEKSEETASTSTKKLPGTVNWGTATTIGVFAGMFYGGSKEAAASVSKDAEVTLKLGS 60
           ME  EK EET   ++ +L G  NWGTAT +GVFAG+ YGGSKEA+ASVSKDAEV LK+GS
Sbjct: 1   MEAVEKPEETIPGNSSRLAGNPNWGTATVVGVFAGLLYGGSKEASASVSKDAEVMLKMGS 60

Query: 61  TPDKREQYRLIRDAMEKRFIRVTRGSIVGGVRLGMFTAAFYGLQNLLAEKRGVHDVLNVA 120
           T DKREQ+RL+RDAMEKRFIRVTRGS++GG+RLGMFTA+F+ LQN LAE RGVHDV NV 
Sbjct: 61  TQDKREQHRLMRDAMEKRFIRVTRGSLIGGMRLGMFTASFFSLQNFLAETRGVHDVFNVV 120

Query: 121 AAGSATAATFGLILPGSLKWRARNVALGSVLGAAFCFPLGWLHLKLVEKANEGNEALAYT 180
            AGSATAA FGLI+PGSL WRARNV LGSVLGA  CFPLGW+ LKL++KANEGN      
Sbjct: 121 GAGSATAAVFGLIMPGSLAWRARNVLLGSVLGATVCFPLGWVQLKLMKKANEGNN----V 180

Query: 181 NTVQKGESKSGVGAAIERFEENLKK 206
           +T   GE  SGVGAAIER E+ L+K
Sbjct: 181 DTGHHGEVTSGVGAAIERLEQQLRK 201

The following BLAST results are available for this feature:

BLAST of Clc01G13060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893751.1	1.8e-102	97.07	uncharacterized protein LOC120082584 [Benincasa hispida]	[more]
XP_004152481.1	3.9e-102	95.61	uncharacterized protein LOC101204093 [Cucumis sativus] >KGN64318.1 hypothetical ...	[more]
XP_008438544.1	5.7e-101	94.63	PREDICTED: uncharacterized protein LOC103483606 [Cucumis melo] >KAA0055237.1 Mit...	[more]
XP_022136982.1	6.9e-99	93.66	uncharacterized protein LOC111008556 [Momordica charantia]	[more]
XP_022954601.1	7.7e-98	92.20	uncharacterized protein LOC111456818 [Cucurbita moschata] >KAG7012252.1 hypothet...	[more]

BLAST of Clc01G13060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G13060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR90	1.9e-102	95.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046150 PE=4 SV=1	[more]
A0A5A7UKY0	2.7e-101	94.63	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal p...	[more]
A0A1S3AWM6	2.7e-101	94.63	uncharacterized protein LOC103483606 OS=Cucumis melo OX=3656 GN=LOC103483606 PE=...	[more]
A0A6J1C6Y4	3.4e-99	93.66	uncharacterized protein LOC111008556 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1GRB7	3.7e-98	92.20	uncharacterized protein LOC111456818 OS=Cucurbita moschata OX=3662 GN=LOC1114568...	[more]

BLAST of Clc01G13060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63000.1	2.3e-76	70.73	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 25..155 e-value: 2.9E-9 score: 37.3
None	No IPR available	PANTHER	PTHR13002	C3ORF1 PROTEIN-RELATED	coord: 18..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G13060.1	Clc01G13060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion