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Clc01G12830 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCAAAGCAGACGAGAGGGGACGTTGAAGCCCTCTCTTGCCGCTCTAACGGCGGGAATGGTGGCTTTTACTGCCGTCGATTGCTTGGTAGGTGGTATCGTTACACTGGATTTGGGCTTTGGTAGGGGAGGGCTCCTTCCAACTTATATGGTGAGTATGTGGGGGTTTTTTTTTTTTTTTTTTTCATCTTCCGGTGTTGTATGTTCATATAGTCGTTCGATTTTTTGTTCTTTTCAACATTTGGCCGAGATTAGGTGCAGATTTGTTTGCCATTTCTTTTTTCTTCGGATATCTGTTGTTTTATAATTTTTTCCTTTCTCATCTTGTTACATGTTCATGGATCTATGGTCTAATCTTCTTCCTTTCATGTTTTGCATATTTATCATACTCATCTTCGATGTTGCATGTTCATATATTTGTTCCATTTTTTTTTCGACATTCGGCCGAGATTGGATGTAGACTTGTGTTCCATTATTTTTTTCATTGAAGATCTGTTGTTGTATAATTTTTTCGTCTTCTGATTTTGTTACATGTTTGTAGATATATGGTTCTTTCATGTTTAGATGAATCTCTTTTGATAGATCTTATTGCCATTTTTTTCCTCTTCTGATTATGTTGCATGTTCATAGATTCATAGTTTCAATTTTTTTTTGTCATTTTCGGATGGGTTTGCATTTTGTTACTCTATTCCTTCCATTTTTTGGATGTTTACATATATGTGGTTTTCATTTTCCATATTGGCCGATGATGATGGTTTTTCCAATTTTCCTTCAAACTGTTTTATCTGGATAATTTTCTTTCCTCGATTACCATTTCGAACTCTACAATTTTCATCTTACCTTTTCAAATGAACATTTGTTTGAAGCATGCTAGATTTTTTCTTTGATTTTAACCAGTTGATCGGTTCCGTTTCTATTTTCTAACTAAAAATGATTGTTTATTTCGTTTTTTTTTACCACACCTGAGGCCATTTTCAAAAAGTAAAATCATAGTAATTGAGTAATTGGATATCTAGTTCTATTCAAACCGAATCTGTTGGATCACAACTATTTTTTTAATTATTATGTTATTATTGTATGTGGTTGTTGGTTTATTAAAATGGTTGTCATTTCTATTAAAAACGTGCACTGTTCCTCATTTTAATTTGGGTGGTTGGATTGCTTAACCTCATTAACTCTATGTTTATATTCACTCTTATTCTTGATCGCACACCATTTGAAGAAGAAATTCTCTCTCCAACTTGTTCCTGTCTAGTGGTGAGTCCCCTTGAAGCCCGACCCCCCTTTTTTTCCTCCTTATGTTATGAATTTGTTTTCATCAAACTTTGTTCTCAATTTGTTCTACTTCCTTGTTTCATGTGACGGTGGACTTGTTATTTCTTCTATGTCTTATTCATTTGCTTGTTCAACCCAATTGATAGTCGGTTTTTAACGGGTACGTACATATGCTTCGGTCTTTTCTATATTTCTGTTCTTGTTCGTAATCTTTACTTAATTAATATATATATATATATTTTTTTTGTCAATGTAGGGTGGAAATTGACATTTAACCAATCTACCCTGTCCAATCGTCACTACATTATACATAAATCATTTGTACTACTCTTTTTTGTTTTTTAAGTACATGTTATTTGTAGAACTTGTTGTTTGAAAAATGTATGTTTTATTTTGTTTGAAATGTTTCTGTATAATTCATTTTGTTCCACCTTTGTTTAAAAACAGTTTGAAAAATTAATGTGTATTTTACGTATTTCATTATTGATCAATGAATTTGAATTGTATATTTTAGTTTATCATTTGTATTATACAATTTTCTTTTTATTTTATATAAAACGCATCTTAGGATATGTGATTAAATATGTGTATTCAAGGTGTAAAAATAAAAAATAAAAAATAATACAGTCAAGAACAACAAAAAAAAATTTTAAGTCAAATTTTCTTTCACCTAATTCATGAGAGCATAAAAGAAAGAACCAAAAAAATAAAATAAAATAAAATACCAATTCAATTCTCGATCCTATTTGAAAGATTTATACGAAAAAGAATTTTTACTTTCAAAATATAAGGTATAATTTATAATTAAAATACAAATGTTCCATCATGAAAAAATAAATGAAGAAGAAGAAGCACAAGAAAGATTTCTTGGTGGTGTCCCAAGAAGAACTACTGCATTCCTTGGAGGAGTTTTCATACTTGTCGGGATTTTGGTGAAAAGATTTACATCCTACCTAAAGACGGTTATTAAAGGTGGAAGTATTTCTAATCCTTAATTCTTCTTAATAGCATGCTAATTGTATTAGTTTATCAAAATTGTTTATTCTTTGTAATTTGTATTTTTCAAAAGAAACTTATTGGCATAAGGCGATCGTTCGTTTCTACTAAGGATTCAAATCCTTCAATTTTTAACACTTATATAAATTTGAGGGCTCCATTTTCAAAATTGAAAGTTGGGTATAATTGCAGCTGCTAAAATATTTGTAGGAAATTTTTGCAAATTTGCCTTCTTTTTATAAGTAGTTTAGTATTTGTAAGATAAATCAAAGTTCTAGGCAAGAAATTCTCCATTCTTGAAAATTTTAAAAGCAAGACAACAATTTTTACTTTTTTTTATTTTATATTCTTAATTAAAGTTTCTTTGTCCAGGTTTATCTTGTTGCATTCACCACCATTCCACTTTATTTAAGTGATTGTAGTGGTTTTTTTTTTTTTTCCCACTCTTTTGTTTGTGTTAAGATTTTCTTTTCCATGTACCAAATGTTGTCAAGTAAAAAAAATAAAAGATTTAAAAAGTAATAATACCGTTATTGACACTTAAAGTTAAATAATTCAAATCACAATAAGATAATATGATTTTCCTCAATGGAGAGGGTGCATATGTTATGTCAAACATTGACCCATTCATCACCATTTATATAGTTTAGACACTCACCGAAAACCTAAGTGAATTTCCTGAGTTATTCAACTTTAGATTGTATGATTTAGTCTTCTACCTGGTAGTAATATAATTTAATTAATCATGAGTTAAAATGAGTTTGACTCAATAGTATTGGCATGTGCTCCGTCCCTAGAGGCTAGAAGTTTAATCCACCTCGCAATTGATGTACTAAAAAAAATAATAAATTAAAATAAAATAATTCATGATCTTTAGAGTGTAACAATTTTGTCCATGTACTTTCAAATTTGTAATAGTTTAGAATCCAATTGGTTTTTTATTTTTAAAAATTAAGTATATTTTCTCCATATTTGTTATAATGATTTGCATCTTTCTTAAATACAATAGTTGAATTCTTAGCTAAATTCTAAAAACAAAAAAAAGTTTTTAAAAGCTACTTTTTTAGTTTTCAAAATTTGATTTGGTTTTTTAAACCATTGATAAAAAGGTAGATAACAAAGGAAGAAAATTGGAGGTAGAAGTAGTTTCTATAAGCTTAATTTTCAAAAACAAAAAAACCATTTATCAAACGGGGCCATAATTACTACTATAAAATATTTTATCAAAATTCAATGCCAATTTCTATTATTTAATGATGTAGACTTCATAATTTATAAACATATTGGATCTCTACTTAGTTTATCAATCTACCTTTCCATGAAATCTCATTAAATCTTAACATTTATTTTAATTACTATAGAGACTAATTAAATCGTTGCAATTTTTAAAGTACAAAAATTTAATTATTTATATAGTAAAATTTAAGAATTAAAATGTTATAAAATTGAAAGTAGGCAAAATAAATCATTACAAACCAAAATTAAATTGAGGAATGATACTAACATAAAAATTGGTTGTTGATGAGAAAGAGAAATAAAGTAAATGTATATAGATACGTTATAATATAAAGTATAAATTTTGAATCTCATTCAAAATAAACTTTATATTATAAGAGAGATGAATATTTAAATGAGATTTAAATATTAATTATATGAATGAGATTCATGTAAAAACTATAGGTTAAAATTAATATGAATGAGATTCATATGAACAACCTAACAATCTCATTCATGGAGGGAGGTCCATGAGATAGCCGGATGGAGAGGCGAGGTCTGGGTCGGAACTTTGTTAGGTTGTTCAAGGAAAGGCAGGGTTGCATTTGTTACTAATGTGTTTTTGTATGTATGATATATCATTTGGAAGGGCTTTCAACTAAAGAAAAAATGCATTTAAAAGTTTTGAAGTTCCTACCTTGAATGTACTTTATACATGACGAGGAAGTAAAGATATTTTAACTATTGAGCTATGTTCATTTTCGAAATTCATTCTTAATCTATTAATTCTTAATATGCCTTCTTTTTGGTATTATTTTCTGCACGTACTCTACTAACTTTTCAAAGAGCAAATTTTCTCTTACCAACTTTTTTATTTTCTCTACAGACATTTCTTCCCAATCTCTCATCAACACACACTTACTCATTACACATGTAGTTCATCTCATTGTTCTGTTTTCAAACTTATCTCACTCAATTTTTTTTCGTTGTAATTTAAAATTTTCAAATATAGAAATAGATCAACATCAAAATGTTAAATACTTTTTGTTAAAAACAGTTTTTATAGAACTTCTATAGAATCATTCGTAAACACCCTTGCTGCTGAAGTCACTTTCAACTCTAGAATCTATCTTAGGTTCCATATAATTGAATCCATTTACTGTTATTCTCAGAGCACAAAGAGTATCAATATAATGGATTTAACCTAGTAGTAGGTGACATATGTCCAAAAACCATGGCTTACATGTGCTAGCTGATGCAGAACTTGATTCCGCTTGGCATAAGGTTTGTAACTTGTAACCTTAATATTATTCAAGTCACATAAATAAATAAATAAATAAATATATATATATATATAATATATATATATATTATATATATATATATATATATATATATATATATATATATATATATATATGCACATGAAAAGCCAAACCAACATGGAAGAAAGAAAAAGTGAAGAAAAATAAAATAGTGAGTGGCTGAAGGCTTTGACTTGCATACAGGCGCAACACTTGAGGCTAAAATTTAATGAACAGCTTCGTGCATTTGCCGAAGGTGAAATACCTAAGAAAGGGTGGATTGAGAGGTTAATGAGGGACGTCGTTAAAGCTGATGAAGGCAAACTTCCTCATATATGCTCCCCTGACTTCGACCCGTCTTTGTCCAATTTCACACCCTTCTGGTAA ATGCTTCAAAGCAGACGAGAGGGGACGTTGAAGCCCTCTCTTGCCGCTCTAACGGCGGGAATGGTGGCTTTTACTGCCGTCGATTGCTTGGTAGGTGGTATCGTTACACTGGATTTGGGCTTTGGTAGGGGAGGGCTCCTTCCAACTTATATGGCGCAACACTTGAGGCTAAAATTTAATGAACAGCTTCGTGCATTTGCCGAAGGTGAAATACCTAAGAAAGGGTGGATTGAGAGGTTAATGAGGGACGTCGTTAAAGCTGATGAAGGCAAACTTCCTCATATATGCTCCCCTGACTTCGACCCGTCTTTGTCCAATTTCACACCCTTCTGGTAA ATGCTTCAAAGCAGACGAGAGGGGACGTTGAAGCCCTCTCTTGCCGCTCTAACGGCGGGAATGGTGGCTTTTACTGCCGTCGATTGCTTGGTAGGTGGTATCGTTACACTGGATTTGGGCTTTGGTAGGGGAGGGCTCCTTCCAACTTATATGGCGCAACACTTGAGGCTAAAATTTAATGAACAGCTTCGTGCATTTGCCGAAGGTGAAATACCTAAGAAAGGGTGGATTGAGAGGTTAATGAGGGACGTCGTTAAAGCTGATGAAGGCAAACTTCCTCATATATGCTCCCCTGACTTCGACCCGTCTTTGTCCAATTTCACACCCTTCTGGTAA MLQSRREGTLKPSLAALTAGMVAFTAVDCLVGGIVTLDLGFGRGGLLPTYMAQHLRLKFNEQLRAFAEGEIPKKGWIERLMRDVVKADEGKLPHICSPDFDPSLSNFTPFW Homology
BLAST of Clc01G12830 vs. NCBI nr
Match: XP_008462211.1 (PREDICTED: transport and Golgi organization 2 homolog [Cucumis melo] >XP_008462220.1 PREDICTED: transport and Golgi organization 2 homolog [Cucumis melo]) HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Clc01G12830 vs. NCBI nr
Match: KAA0052070.1 (transport and Golgi organization 2-like protein [Cucumis melo var. makuwa] >TYK00685.1 transport and Golgi organization 2-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Clc01G12830 vs. NCBI nr
Match: XP_022153121.1 (transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153123.1 transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153124.1 transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153125.1 transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153126.1 transport and Golgi organization 2 homolog [Momordica charantia]) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-11 Identity = 39/58 (67.24%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Clc01G12830 vs. NCBI nr
Match: XP_011654181.1 (transport and Golgi organization 2 homolog [Cucumis sativus] >XP_011654185.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739931.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739936.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739942.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739946.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739952.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739957.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739963.1 transport and Golgi organization 2 homolog [Cucumis sativus] >XP_031739965.1 transport and Golgi organization 2 homolog [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-10 Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 0
BLAST of Clc01G12830 vs. NCBI nr
Match: KAF3973804.1 (hypothetical protein CMV_002802 [Castanea mollissima]) HSP 1 Score: 70.9 bits (172), Expect = 8.0e-09 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Clc01G12830 vs. ExPASy TrEMBL
Match: A0A1S3CGF4 (transport and Golgi organization 2 homolog OS=Cucumis melo OX=3656 GN=LOC103500621 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Clc01G12830 vs. ExPASy TrEMBL
Match: A0A5A7UA61 (Transport and Golgi organization 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00250 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Clc01G12830 vs. ExPASy TrEMBL
Match: A0A6J1DFX0 (transport and Golgi organization 2 homolog OS=Momordica charantia OX=3673 GN=LOC111020699 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.4e-11 Identity = 39/58 (67.24%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Clc01G12830 vs. ExPASy TrEMBL
Match: A0A0A0LSJ0 (Sterile domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G144330 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.6e-10 Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 0
BLAST of Clc01G12830 vs. ExPASy TrEMBL
Match: A0A5N6RBW6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014100 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.9e-09 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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