Clc01G12510 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G12510
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	ClcChr01: 23444133 .. 23448182 (+)
RNA-Seq Expression	Clc01G12510
Synteny	Clc01G12510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTATTTTGGAAAGGTTTTTTTTTTAAAATCTAGGTCGCTTTTGTTTTTTGAGAACATCAGAGCCCAAGAAGGGATTCAAGCCCATGAGCCGATTGTTCAACTTGCTTGTACTTTAGGAGGGTTGGAGACACATTCTATAAGAGTCGTGGAAGAACATCAAGGAATGAGATAGGAGCTAGAGGTGGGTGTCGGGCCGTCGGATCCTTTAGCTAAAGATGGGGATCTTGGATCCAACCCATCGATTGTTAGTTATTCTGACGATGAATCGTTTCTCTCAACTTCGATGTTGAACAAAGCGACGGAGAAGGGTGTCAAGGGGCTTTTTTCGGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTCGAAAGTGTTGTTTGAGCAAGTGAGCTGGGATGGGTTAGTAAGCAATGGTGATGTCGCTCAAGTGAAGGTGCCGAAGGCTGTGGATGGAGTTGCTGACACAAAAGTGATGAATAAAACGGGCTTTGAGAATCAGAAGGCTCCGCCTTTTGATAGAGGCTATTCCTCAGGTCTTGCTATTGGGTCTTGCTCCTACTCCTATCTGATGGTAAGCACGGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGAGGCTGGTGACATTCCGTCCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTTAGTTTTGAGAGTTTCTATCACCCTTTGGTCTTTCTATAACCCTTTTCTCATATGAGGTGTGCCTTACCCTTTTCGCCCACGTTTTCTCTGGGAGATAGGTGGCTGGTGTTTGATCCTTTGGTTCATGCTGCAAGTTATAGGTCAAGGGGTGATGGTATGCTTCTTACCAACGGGGGTGTTCTTGGAGCTCCTTTAGCTACTCCTAGTTCTCTTGATTCTCAGACCTCACGATCGAGTATTGGCATTGAAAACCCGGGGTGGGCCGCTCTACCCTTGGTGGGAATCAAACAACTAAAGGTTAAGGGAGGTTAGGGGGAAAAGGGGGGCTTGGGCTCCTGGGAGATGGTGGTAGTGGAGAAGAGGAAACAAAAAGAGGGTGGTGATAAATTAGCTAGGGAGTTAAAGAAGTTGGACAGTTCGATTACCTATGGGAGTAGGAAAGCCTCAAAGGAGGCCAGGCCATCCACGTCTAAATGCTAAAAATCGTTCTTGGTATGTTAGGGGGTTGAAAGGTCAAGTTAAAAGAAGGCTTGTTAAGGAGGTTCTTAGACAAGAGTGTCCGGATATTGTCATCTTAGGAAACTAAAAGAAGTTCTTTTAGCATGAGGTGTGTTAGGAGCATTTGGAGGAGTAGGAGGGTGGAGTGGGAGGTCCTTGATTCGGTTGGGTCCTCCGGAGGAATCCTCATTATGTGGAACACAAGGTCCTGTATTGCAAAAGAGATTGTTAGGGGCAATTTTTCTCTTTCCATTTCTTTTTTGGATAGTGAAGGTGAGGAGTTTTGGATTTCTGGGGTTTATAGTCCCCCGAGCCTAGGGGAAGGGATGCTTTTTGGGAGGAGTTGAGAGATCTCTTTGGTTATTATGGATCACGATGGTGTGTGGCTGGGGATTTCAATGTTATTCGTTCTCCTGAGGAGAAGACGTCTAGGGGTAGGATCACTAGTTCCATGAGGTCGTTCAACAAGTTCATTGATGATAGTGGGCTGGTTGACCTCCTTTTGGTTGATGGTAAGTTTACCTGGGCCAATAGCAGGGCTGCTACTAGGATTGATAGATTTCTTGCAGCTAAGGATTGGATTGGTAGGTCTGGAAATTCGAGGCAAACAAGAGGGCCAAGAGTTACGTCAGATCATTGACCCATTATTCTGACTTCTGGATCTTCGAACTGAGGACCCAACCCGTTTTGTTTTGAGAATATGTGGCTTGATGGTAGGTCTGGAAATCCGAGGCAAACAAGAGGGCCAAGAGTTACGTCAGATCATTGACCCATTATTCTGACTTTTGGATCTTCGAACTGAGGACCCAACCCGTTTTGTTTTGAGAATATGTGGCTTGATCACCCGTCTTTTAAGACTAATATTTTGTGTTGGTGGAGTACAACGGTCCTCGGAAAGTGGGAAGGCTATCGTCTTATGGGAGAGCTGAGGGTGTTAAAAGGGAAACCTTAAAGTGTGGAATAGAGAAGTTTTTGGAGATATCTGAATAAGGAAGAAAGAGATCTTAGCTAGAATTGATGAGATCGACGCGCTCGAGCTAGAAGGCCCTCTTGTTAGCCCACTGAAAGGTGAGAGAAATGCCTTGAAAGGGGTTTTGCTAAGTTGATAAGAAAGGAGAATGTTAGTTGGAGTCAAAAGGCCAAAGTAAAATGGGCCACAAGTGGATTGTAACACTAGCTACTTCCATAGAGTGGCTAGTGGTAGAAGGAATAGGAATCACATTGGGACTTTGGTTCTTGAGAATGGGGTGCGTACTAGCAACGACAAGGAGACTAAGGAAGAGATTCTTTTGGCCTTCTCTAAGCTTTATAGCCCAACTATTCAGGAGAAGCTGTTTGTGGAAGGCATTGAATGGAGCCCCATTTCCTCTAGGGAGGATGAGGAGCTTGTGGCTCTGTTCACTTTGGAGGAAATCAGAAAGGCGGTTTTCAGCAGTGATAGGAATAAATCCCCTGGCCTGGATGACTTTACCATGGCTTTCTTCTCGGACAATTGGAATCTTGTTAAGGGTGATTTGGAGGGGGTCTTTAAAGAGTTCTTCAAAAGAGGTATCTTGAATCGGTCCATAGTGGAGACTTTCGTGTGTCTAATTCCTAAGAAGGAAAATGCTATCAGGGTGAAGGAGTCTAGACCTATTAGTCTCATAACCAATGTTTATAAGATCTTGGCTAAGGTTCTCGCTAATCGATTAAGGAAAGTGATGCCCTCTACCATTTTTAAGCTGCAAGGAGCTTTTTTGGCTGGAAGGCAGATCTTAGATCAAGCTCTTATAGCCAACAAGGCCATTGAGGACACCCACATGAAGAAAAAGGACGGAGTTGTCCTCAAACTTGATTTCTTGGACAAGGTAATGATGAAGAAAGGTTTTGGGTTTAGATGCAGGATGGGGATGTGGGGTTGCATTAGGAATGTGCAGTACTCTATTCTAATCAATGGAACCCTAAAAGGGTCGATTCAAGCGTCTAGAGGTCTAAGGCAAGGGGACCCCTTGTCCCCTTTCTTATTCTTACTCGTTGTGGATGTCCTAAGCCAACTTATTGTTAAGGGGGTGGAAGGAAACATCATAGAACCTTTTAGGGTTAGTTCAAACGAGGTGACCTTGTCACACACCTTCAGTTTGCTTATGACACTATCTTGTTTTGTTTGGGTAAAGAGGATTCCTTCTTGATCCTTAATCACATGGTTGAGTTTTTTGAAGCCATGTCTGATCTTAAAATTAACAGGAGCAAGTGTCAAATTTTGGGGATTAATAGTGACCTTGAGAAGATTGAGAGATGGGTAGAGATGTTTGGGTGTGAGGTTGGATCATTCCCTTCTTCTTATCTTGGGCTTCCCTTGGGAGGTAACCAGGGGGCTGTGACTTTTTGGAATCCCATTTATGAGAAGATCCATAAGAGGCTTGCCACATGGAAGAAAAGTTTCTCTTCCAAAGTGGGTAGGTTAACTCTAATTAGATCGGTGCTAAGTGGTATTCCTGTGTATTACTTTTCCTTATTTTTTTTTTTCGGGTTCCTAGTTTGATTTGCAAGAGTTCAGAAAAGTTCATGAGGGGACTTTATGTGAGATGGGATGGATGAAGGGAAGGGTTCTCATTTGGTCAGTTGAGAGGTGATTGGGTGGCCTATGCATCAGGAGGGGCTGGAGATTGATATCTTAAGGACTCGCAATAGAGCTTTGTTGGCTATGTGGCTTTGGCGCTTCCCTCTTGAGCCCGAGGCTTTGTGGTGTAGGATCATTGTGAGCAAGCATGGTAGCCATCCTTTTGATTGGGTGGAGAAAAGGGTTAAAGGCACCCTAGAAAGACATTTCGTTTGA

mRNA sequence

ATGGGCTATTTTGGAAAGGAGCTAGAGGTGGGTGTCGGGCCGTCGGATCCTTTAGCTAAAGATGGGGATCTTGGATCCAACCCATCGATTGTTAGTTATTCTGACGATGAATCGTTTCTCTCAACTTCGATGTTGAACAAAGCGACGGAGAAGGGTGTCAAGGGGCTTTTTTCGGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTCGAAAGTGTTGTTTGAGCAAGTGAGCTGGGATGGGTTAGTAAGCAATGGTGATGTCGCTCAAGTGAAGGTGCCGAAGGCTGTGGATGGAGTTGCTGACACAAAAGTGATGAATAAAACGGGCTTTGAGAATCAGAAGGCTCCGCCTTTTGATAGAGGCTATTCCTCAGGTCTTGCTATTGGGTCTTGCTCCTACTCCTATCTGATGGTAAGCACGGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGAGGCTGGTGACATTCCGTCCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTGGCTGGTGTTTGATCCTTTGGTTCATGCTGCAAGTTATAGGTCAAGGGGTGATGGTATGCTTCTTACCAACGGGGGTGTTCTTGGAGCTCCTTTAGCTACTCCTAGTTCTCTTGATTCTCAGACCTCACGATCGAGTATTGGCATTGAAAACCCGGGGTGGGCCGCTCTACCCTTGGTGGGAATCAAACAACTAAAGTCCCCCGAGCCTAGGGGAAGGGATGCTTTTTGGGAGGAGTTGAGAGATCTCTTTGGTTATTATGGATCACGATGGTGTGTGGCTGGGGATTTCAATGTTATTCGTTCTCCTGAGGAGAAGACGTCTAGGGGTAGGATCACTAGTTCCATGAGGTCGTTCAACAAGTTCATTGATGATAGTGGGCTGGTTGACCTCCTTTTGGTTGATGGTAAGTTTACCTGGGCCAATAGCAGGGCTGCTACTAGGATTGATAGATTTCTTGCAGCTAAGGATTGGATTGGTAGGAAGAAAGAGATCTTAGCTAGAATTGATGAGATCGACGCGCTCGAGCTAGAAGGCCCTCTTGTTAGCCCACTGAAAGTGGATTGTAACACTAGCTACTTCCATAGAGTGGCTAGTGGTAGAAGGAATAGGAATCACATTGGGACTTTGGTTCTTGAGAATGGGGTGCGTACTAGCAACGACAAGGAGACTAAGGAAGAGATTCTTTTGGCCTTCTCTAAGCTTTATAGCCCAACTATTCAGGAGAAGCTGTTTGTGGAAGGCATTGAATGGAGCCCCATTTCCTCTAGGGAGGATGAGGAGCTTGTGGCTCTGTTCACTTTGGAGGAAATCAGAAAGGCGGTTTTCAGCAGTGATAGGAATAAATCCCCTGGCCTGGATGACTTTACCATGGCTTTCTTCTCGGACAATTGGAATCTTGTTAAGGGTGATTTGGAGGGGGTCTTTAAAGAGTTCTTCAAAAGAGGTATCTTGAATCGGTCCATAGTGGAGACTTTCGTGTGTCTAATTCCTAAGAAGGAAAATGCTATCAGGGTGAAGGAGTCTAGACCTATTAGTCTCATAACCAATGTTTATAAGATCTTGGCTAAGGTTCTCGCTAATCGATTAAGGAAAGTGATGCCCTCTACCATTTTTAAGCTGCAAGGAGCTTTTTTGGCTGGAAGGCAGATCTTAGATCAAGCTCTTATAGCCAACAAGGCCATTGAGGACACCCACATGAAGAAAAAGGACGGAGTTGTCCTCAAACTTGATTTCTTGGACAAGGTAATGATGAAGAAAGGTTTTGGGTTTAGATGCAGGATGGGGATGTGGGGTTGCATTAGGAATGTGCAGTACTCTATTCTAATCAATGGAACCCTAAAAGGGTCGATTCAAGCGTCTAGAGGTCTAAGGCAAGGGGACCCCTTGTCCCCTTTCTTATTCTTACTCGTTGTGGATGTCCTAAGCCAACTTATTGTTAAGGGGGTGGAAGGAAACATCATAGAACCTTTTAGGGAGGGGCTGGAGATTGATATCTTAAGGACTCGCAATAGAGCTTTGTTGGCTATGTGGCTTTGGCGCTTCCCTCTTGAGCCCGAGGCTTTGTGGTGTAGGATCATTGTGAGCAAGCATGGTAGCCATCCTTTTGATTGGGTGGAGAAAAGGGTTAAAGGCACCCTAGAAAGACATTTCGTTTGA

Coding sequence (CDS)

ATGGGCTATTTTGGAAAGGAGCTAGAGGTGGGTGTCGGGCCGTCGGATCCTTTAGCTAAAGATGGGGATCTTGGATCCAACCCATCGATTGTTAGTTATTCTGACGATGAATCGTTTCTCTCAACTTCGATGTTGAACAAAGCGACGGAGAAGGGTGTCAAGGGGCTTTTTTCGGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTCGAAAGTGTTGTTTGAGCAAGTGAGCTGGGATGGGTTAGTAAGCAATGGTGATGTCGCTCAAGTGAAGGTGCCGAAGGCTGTGGATGGAGTTGCTGACACAAAAGTGATGAATAAAACGGGCTTTGAGAATCAGAAGGCTCCGCCTTTTGATAGAGGCTATTCCTCAGGTCTTGCTATTGGGTCTTGCTCCTACTCCTATCTGATGGTAAGCACGGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGAGGCTGGTGACATTCCGTCCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTGGCTGGTGTTTGATCCTTTGGTTCATGCTGCAAGTTATAGGTCAAGGGGTGATGGTATGCTTCTTACCAACGGGGGTGTTCTTGGAGCTCCTTTAGCTACTCCTAGTTCTCTTGATTCTCAGACCTCACGATCGAGTATTGGCATTGAAAACCCGGGGTGGGCCGCTCTACCCTTGGTGGGAATCAAACAACTAAAGTCCCCCGAGCCTAGGGGAAGGGATGCTTTTTGGGAGGAGTTGAGAGATCTCTTTGGTTATTATGGATCACGATGGTGTGTGGCTGGGGATTTCAATGTTATTCGTTCTCCTGAGGAGAAGACGTCTAGGGGTAGGATCACTAGTTCCATGAGGTCGTTCAACAAGTTCATTGATGATAGTGGGCTGGTTGACCTCCTTTTGGTTGATGGTAAGTTTACCTGGGCCAATAGCAGGGCTGCTACTAGGATTGATAGATTTCTTGCAGCTAAGGATTGGATTGGTAGGAAGAAAGAGATCTTAGCTAGAATTGATGAGATCGACGCGCTCGAGCTAGAAGGCCCTCTTGTTAGCCCACTGAAAGTGGATTGTAACACTAGCTACTTCCATAGAGTGGCTAGTGGTAGAAGGAATAGGAATCACATTGGGACTTTGGTTCTTGAGAATGGGGTGCGTACTAGCAACGACAAGGAGACTAAGGAAGAGATTCTTTTGGCCTTCTCTAAGCTTTATAGCCCAACTATTCAGGAGAAGCTGTTTGTGGAAGGCATTGAATGGAGCCCCATTTCCTCTAGGGAGGATGAGGAGCTTGTGGCTCTGTTCACTTTGGAGGAAATCAGAAAGGCGGTTTTCAGCAGTGATAGGAATAAATCCCCTGGCCTGGATGACTTTACCATGGCTTTCTTCTCGGACAATTGGAATCTTGTTAAGGGTGATTTGGAGGGGGTCTTTAAAGAGTTCTTCAAAAGAGGTATCTTGAATCGGTCCATAGTGGAGACTTTCGTGTGTCTAATTCCTAAGAAGGAAAATGCTATCAGGGTGAAGGAGTCTAGACCTATTAGTCTCATAACCAATGTTTATAAGATCTTGGCTAAGGTTCTCGCTAATCGATTAAGGAAAGTGATGCCCTCTACCATTTTTAAGCTGCAAGGAGCTTTTTTGGCTGGAAGGCAGATCTTAGATCAAGCTCTTATAGCCAACAAGGCCATTGAGGACACCCACATGAAGAAAAAGGACGGAGTTGTCCTCAAACTTGATTTCTTGGACAAGGTAATGATGAAGAAAGGTTTTGGGTTTAGATGCAGGATGGGGATGTGGGGTTGCATTAGGAATGTGCAGTACTCTATTCTAATCAATGGAACCCTAAAAGGGTCGATTCAAGCGTCTAGAGGTCTAAGGCAAGGGGACCCCTTGTCCCCTTTCTTATTCTTACTCGTTGTGGATGTCCTAAGCCAACTTATTGTTAAGGGGGTGGAAGGAAACATCATAGAACCTTTTAGGGAGGGGCTGGAGATTGATATCTTAAGGACTCGCAATAGAGCTTTGTTGGCTATGTGGCTTTGGCGCTTCCCTCTTGAGCCCGAGGCTTTGTGGTGTAGGATCATTGTGAGCAAGCATGGTAGCCATCCTTTTGATTGGGTGGAGAAAAGGGTTAAAGGCACCCTAGAAAGACATTTCGTTTGA

Protein sequence

MGYFGKELEVGVGPSDPLAKDGDLGSNPSIVSYSDDESFLSTSMLNKATEKGVKGLFSEDANAQGDSNPNPLSKVLFEQVSWDGLVSNGDVAQVKVPKAVDGVADTKVMNKTGFENQKAPPFDRGYSSGLAIGSCSYSYLMVSTVGNMSQVSPLSLVSYPPSELGLLESEAGDIPSNLLFSFPCNVGGGDGRWLVFDPLVHAASYRSRGDGMLLTNGGVLGAPLATPSSLDSQTSRSSIGIENPGWAALPLVGIKQLKSPEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSGLVDLLLVDGKFTWANSRAATRIDRFLAAKDWIGRKKEILARIDEIDALELEGPLVSPLKVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLITNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVLKLDFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLFLLVVDVLSQLIVKGVEGNIIEPFREGLEIDILRTRNRALLAMWLWRFPLEPEALWCRIIVSKHGSHPFDWVEKRVKGTLERHFV

Homology

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BLAST of Clc01G12510 vs. NCBI nr
Match: RVW16207.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-97
Identity = 228/643 (35.46%), Postives = 307/643 (47.74%), Query Frame = 0


Query: 265 RDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSGLVDLL 324
           R  FW EL D+FG     W V GDFNVIR   EK     +T SM+ F+ FI D  L+D  
Sbjct: 116 RQDFWVELSDIFGLSSPCWWVGGDFNVIRRSSEKLGGSSLTPSMKDFDDFIRDCELIDSP 175

Query: 325 LVDGKFTWANSR---AATRIDRFLAAKDW------------------------------- 384
           L    FTW+N +      R+DRFL + +W                               
Sbjct: 176 LRSAPFTWSNLQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLPRWTLAHWPIVLETNPFKW 235

Query: 385 ------------------------------------------------------------ 444
                                                                       
Sbjct: 236 GPTPFRFENMWLQHPSFKESFGSWWREFQGNGWEGHKFMRKLQFVKAKLKEWNKDSFGEL 295

Query: 445 IGRKKEILARIDEIDALELEGPLVSPLKV------------------------------- 504
             RKK IL+ +   D LE EG L   L V                               
Sbjct: 296 NERKKSILSDLANFDTLEQEGGLSPKLLVQRALRKGELEELILREEIHWRKKARVKWVKE 355

Query: 505 -DCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSPTIQEKLFV 564
            DCN+++FH+VA+GRRNR  I  L  E  +  +N +  KEEIL  F KLY+   +E   V
Sbjct: 356 GDCNSNFFHKVANGRRNRKFIKVLENERALMLNNSESIKEEILRYFEKLYASPSEEPWRV 415

Query: 565 EGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLE 624
           EG++WSPIS      L + FT EEI KA+F  DR+K+PG DDFT+A F D W ++K DL 
Sbjct: 416 EGLDWSPISGESASRLESPFTEEEISKAIFQLDRDKAPGPDDFTIAVFQDCWEVIKEDLV 475

Query: 625 GVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLITNVYKILAKVLANRLRKV 684
            VF +F + GI+N+S   +F+ L+PKK  + ++    PISLIT++YKI+ KVLA  LR+V
Sbjct: 476 RVFAKFHRSGIINQSTNASFIVLLPKKSMSKKISYYIPISLITSLYKIIVKVLARHLREV 535

Query: 685 MPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVLKLD-----------FLDK 744
           +  TI   QGAF+ GRQILD  LIAN+ + +     ++GVV K+D           FLD 
Sbjct: 536 LHKTIHSTQGAFVQGRQILDAVLIANEIVNEKRRSGEEGVVFKIDFEKAYDHVSWGFLDH 595

[Close]

BLAST of Clc01G12510 vs. NCBI nr
Match: RVX23556.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 366.7 bits (940), Expect = 4.8e-97
Identity = 219/583 (37.56%), Postives = 296/583 (50.77%), Query Frame = 0


Query: 241 IENPGWAALPLVGIKQLKSPEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTS 300
           + N  W  LP  G        P  R  FW EL D+ G     WCV GDFNVIR   EK  
Sbjct: 76  VRNKDWDFLPACGASVYGPNSPSLRKDFWVELYDICGLTFPLWCVGGDFNVIRRSSEKLG 135

Query: 301 RGRITSSMRSFNKFIDDSGLVDLLLVDGKFTWAN---SRAATRIDRFLAAKDW------- 360
             R+TSSMR F+ FI +S L+D  L +  FTW+N   S    R+DRFL + +W       
Sbjct: 136 GSRLTSSMRDFDSFISESELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGQLFPQG 195

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 196 TQETLIRRTSDHWPIALDTNPFTWGPTPFRFENMWLQHPSFKENFRNWWRGFQGNGWEGH 255

Query: 421 ------------------------IGRKKEILARIDEIDALELEGPLVSPL--------- 480
                                     +KK IL  +  +DA+E +G L S L         
Sbjct: 256 KFMRRLQFVKAKAKEWNKLSFGVLNEKKKSILKDLANLDAIEQDGGLTSELLGQRALRKG 315

Query: 481 -----------------------KVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDK 540
                                  + DCN+ +FH+VA+GRRNR +I +L  E G+  +N  
Sbjct: 316 ELEDLILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKYIKSLENETGLVLNNAM 375

Query: 541 ETKEEILLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNK 600
              EEILL F KLY+  I E   +EG++WSPIS      LVA FT EEI KA+F  DR+K
Sbjct: 376 SITEEILLYFEKLYANPIGESWSIEGLDWSPISEESAISLVAPFTEEEISKAIFKMDRDK 435

Query: 601 SPGLDDFTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKES 660
           +PG D FT+A F D W+++K DL  VF EF + G++N+S   +F+ L+PKK    ++ + 
Sbjct: 436 APGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGVINQSTNASFIVLLPKKSTTKKISDF 495

Query: 661 RPISLITNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKK 687
           RPISLIT++YKI+AKVL+ RLR V+  TI   QGAF+ GRQI+D  LIAN+ +++     
Sbjct: 496 RPISLITSLYKIIAKVLSGRLRGVLHETIHSTQGAFVQGRQIMDAVLIANEIVDERRRSG 555

[Close]

BLAST of Clc01G12510 vs. NCBI nr
Match: CAN74944.1 (hypothetical protein VITISV_000894 [Vitis vinifera])

HSP 1 Score: 365.9 bits (938), Expect = 8.1e-97
Identity = 208/468 (44.44%), Postives = 270/468 (57.69%), Query Frame = 0


Query: 262  PRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSGLV 321
            P  R  FW EL DLFG     WCV GDFNVIR   EK    R+TSSMR F+ FI +S L 
Sbjct: 737  PPIRKEFWVELSDLFGLTYPSWCVGGDFNVIRRKSEKLGGSRVTSSMRDFDGFIRESELH 796

Query: 322  DLLLVDGKFTWANSRAATRIDRFLAAKDWIGRKKEILARIDEIDALELEGPLVSPLKV-- 381
            D  L +  FTW+N + +              RKK I   I  IDA+E EG L S L    
Sbjct: 797  DPPLRNASFTWSNMQESPE------------RKKTISDEIANIDAIEQEGALSSDLAAQR 856

Query: 382  ------------------------------DCNTSYFHRVASGRRNRNHIGTLVLENGVR 441
                                          DCN+  FH+VA+GRRN+N I  L  E G+ 
Sbjct: 857  AIRKGELEELILREEIHWKQKAKIKWVKEGDCNSKLFHKVANGRRNKNFIKILENERGLV 916

Query: 442  TSNDKETKEEILLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFS 501
              + +   EEILL F KLYS   +E   VEGI+WSPIS      L + F   EI  A+F 
Sbjct: 917  LDSSESITEEILLYFKKLYSCPTRESWRVEGIDWSPISEESASRLDSPFAEAEIFNAIFQ 976

Query: 502  SDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAI 561
             DR+K+PG D FT+A F D W+++K DL  VF EF   GI+N++   +F+ L+PKK  + 
Sbjct: 977  LDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIVLLPKKSQSK 1036

Query: 562  RVKESRPISLITNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIED 621
            ++ + RPISLIT +YKI+AKVL+ RLR V+  TI   QGAF+ GRQILD  LI N+ +++
Sbjct: 1037 KISDFRPISLITCLYKIIAKVLSGRLRGVLQETIHSTQGAFVQGRQILDAVLITNEIVDE 1096

Query: 622  THMKKKDGVVLKL-----------DFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGT 681
                 ++GVV K+           DFLD V+ KKGF  R R  M GC+ +V Y+IL+NG 
Sbjct: 1097 KKRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRSWMRGCLSSVSYAILVNGN 1156

Query: 682  LKGSIQASRGLRQGDPLSPFLFLLVVDVLSQLIVKGVEGNIIEPFREG 687
             KG ++A+RGLRQGDPLSPFLF +V DVLS++++K  E N++E FR G
Sbjct: 1157 AKGWVKAARGLRQGDPLSPFLFTIVADVLSRMLLKAEERNLLEGFRVG 1192

[Close]

BLAST of Clc01G12510 vs. NCBI nr
Match: KAA0032235.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 361.7 bits (927), Expect = 1.5e-95
Identity = 222/498 (44.58%), Postives = 286/498 (57.43%), Query Frame = 0


Query: 260 PEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSG 319
           P   GR+ FWEEL DL+ Y G RWCV GDFNV+ SP+EK   G+IT S+R FN FIDDSG
Sbjct: 226 PRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSG 285

Query: 320 LVDLLLVDGKFTWANSRAATRIDRFLAAKDWIGR-------------------KKEILAR 379
           L D  L++GKFT AN RA+TRIDR L +K WI R                   KKE +AR
Sbjct: 286 LFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERFGTLGREFGFWWNTVSKAKKKENVAR 345

Query: 380 IDEIDALELEGPLVSPLKVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEI 439
           I++ID LEL GP                               LENG+            
Sbjct: 346 INDIDYLELNGP-------------------------------LENGL------------ 405

Query: 440 LLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDD 499
                      ++E+  V+      IS REDEE V  FT+E I K VF+ D N++ G D 
Sbjct: 406 -----------VEERFSVKWSLDEAISPREDEEHVVPFTIEVIEKVVFNCDGNRALGADG 465

Query: 500 FTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLI 559
           F+MAFF D+W+L+KGDLEGVFKEFF+RGILN+ +VETFVCLIPKK+NA +VK+ +PISLI
Sbjct: 466 FSMAFFQDDWDLIKGDLEGVFKEFFERGILNKLVVETFVCLIPKKDNANKVKDFQPISLI 525

Query: 560 TNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVL 619
           T+VYKILAKVLAN LRKV+P  +   + AFL  R+ILDQALI+N+AIE+           
Sbjct: 526 TSVYKILAKVLANCLRKVLPLNLSDYRKAFLPRRKILDQALISNEAIEEYR--------- 585

Query: 620 KLDFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLF 679
            + F + +  K     + R+  W   +N  +S     TL  S     G+ +G       +
Sbjct: 586 AMSFWNPIYEK----IQKRLATW---KNGFFSKAGKLTLIKS-----GVVEGHD----SY 633

Query: 680 LLVVDVLSQLIVKGVEGNIIEPFREGLEIDILRTRNRALLAMWLWRFPLEPEALWCRIIV 739
           L+ ++ +   + +G           GL +  LR RNRALLA WLW F LEP++LW RII+
Sbjct: 646 LISLEAVGLPVSQG-----------GLGVGNLRIRNRALLAKWLWCFHLEPDSLWNRIIL 633

[Close]

BLAST of Clc01G12510 vs. NCBI nr
Match: TYK22164.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 3.4e-95
Identity = 222/498 (44.58%), Postives = 281/498 (56.43%), Query Frame = 0


Query: 260 PEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSG 319
           P   GR+ FWEEL DL+ Y G RWCV GDFNV+ SP+EK   G+IT S+R FN FIDDSG
Sbjct: 176 PRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSG 235

Query: 320 LVDLLLVDGKFTWANSRAATRIDRFLAAKDWIGR-------------------KKEILAR 379
           L D  L++GKFT AN RA+TRIDR L +K WI R                   KKE +AR
Sbjct: 236 LFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERFGTLGREFGFWWNTVSKAKKKENVAR 295

Query: 380 IDEIDALELEGPLVSPLKVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEI 439
           I++ID LEL GP                               LENG+            
Sbjct: 296 INDIDYLELNGP-------------------------------LENGL------------ 355

Query: 440 LLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDD 499
                      ++E+  V+      IS REDEE V  FT+E I K VF+ D N++ G D 
Sbjct: 356 -----------VEERFSVKWSLDEAISPREDEEHVVPFTIEVIEKVVFNCDGNRALGADG 415

Query: 500 FTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLI 559
           F+MAFF D+W+L+KGDLEGVFKEFF+RGILN+ +VETFVCLIPKK+NA +VK+ +PISLI
Sbjct: 416 FSMAFFQDDWDLIKGDLEGVFKEFFERGILNKLVVETFVCLIPKKDNANKVKDFQPISLI 475

Query: 560 TNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVL 619
           T+VYKILAKVLAN LRKV+P  +   + AFL  R+ILDQALI+N+AIE+           
Sbjct: 476 TSVYKILAKVLANCLRKVLPLNLSDYRKAFLPRRKILDQALISNEAIEEYR--------- 535

Query: 620 KLDFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLF 679
            + F + +  K     + R+  W   +N  +S     TL  S+ +           P  +
Sbjct: 536 AMSFWNPIYEK----IQKRLATW---KNGFFSKAGKLTLIKSVLSD---------IPMYY 579

Query: 680 LLVVDVLSQLIVKGVEGNIIEPFREGLEIDILRTRNRALLAMWLWRFPLEPEALWCRIIV 739
           L +V   S                 GL +  LR RNRALLA WLW F LEP++LW RII+
Sbjct: 596 LSLVRASS---------------GGGLGVGNLRIRNRALLAKWLWCFHLEPDSLWNRIIL 579

[Close]

BLAST of Clc01G12510 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 5.6e-24
Identity = 87/319 (27.27%), Postives = 146/319 (45.77%), Query Frame = 0


Query: 379 VDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSP-TIQEKLF 438
           +D  + +F+ +   + NR  I  L  E+G    + +  ++     +  L+SP  I     
Sbjct: 368 MDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDAC 427

Query: 439 VEGIEWSP-ISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGD 498
            E  +  P +S R  E L    TL+E+ +A+     NKSPGLD  T+ FF   W+ +  D
Sbjct: 428 EELWDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPD 487

Query: 499 LEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLITNVYKILAKVLANRLR 558
              V  E FK+G L  S     + L+PKK +   +K  RP+SL++  YKI+AK ++ RL+
Sbjct: 488 FHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLK 547

Query: 559 KVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVLKLDFLDK--------- 618
            V+   I   Q   + GR I D   +    +   H  ++ G+ L    LD+         
Sbjct: 548 SVLAEVIHPDQSYTVPGRTIFDNVFLIRDLL---HFARRTGLSLAFLSLDQEKAFDRVDH 607

Query: 619 -----VMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLFLL 678
                 +    FG +    +     + +  + IN +L   +   RG+RQG PLS  L+ L
Sbjct: 608 QYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSL 667

Query: 679 VVDVLSQLIVKGVEGNIIE 682
            ++    L+ K + G +++
Sbjct: 668 AIEPFLCLLRKRLTGLVLK 683

[Close]

BLAST of Clc01G12510 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 4.6e-18
Identity = 86/325 (26.46%), Postives = 154/325 (47.38%), Query Frame = 0


Query: 388 RVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSPTIQE----KLFVEGIEW 447
           R+  G R++  I  +  E G  T++ +E +  I   + +LYS  ++       F++  + 
Sbjct: 386 RLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQV 445

Query: 448 SPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFKE 507
             ++  + + L +  + +EI   + S    KSPG D F+  F+      +   L  +F +
Sbjct: 446 PKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHK 505

Query: 508 FFKRGILNRSIVETFVCLIPK-KENAIRVKESRPISLITNVYKILAKVLANRLRKVMPST 567
               G L  S  E  + LIPK +++  +++  RPISL+    KIL K+LANR+++ + + 
Sbjct: 506 IEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAI 565

Query: 568 IFKLQGAFLAGRQILDQALIANKAIEDTH----MKKKDGVVLKLD-----------FLDK 627
           I   Q  F+ G Q         K+I   H    +K K+ +++ LD           F+ K
Sbjct: 566 IHPDQVGFIPGMQ---GWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIK 625

Query: 628 VMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLFLLVVDVL 687
           V+ + G        +         +I +NG    +I    G RQG PLSP+LF +V++VL
Sbjct: 626 VLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVL 685

Query: 688 SQLIVKGVEGNIIEPFREGLEIDIL 693
           ++ I +  E   I+  +E ++I +L
Sbjct: 686 ARAIRQQKEIKGIQIGKEEVKISLL 707

[Close]

BLAST of Clc01G12510 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-18
Identity = 91/316 (28.80%), Postives = 142/316 (44.94%), Query Frame = 0


Query: 388 RVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSPTIQE----KLFVEGIEW 447
           R+   +R +N I T+  + G  T++  E +  I   +  LY+  ++       F++    
Sbjct: 379 RLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTL 438

Query: 448 SPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFKE 507
             ++  E E L    T  EI   + S    KSPG D FT  F+      +   L  +F+ 
Sbjct: 439 PRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQS 498

Query: 508 FFKRGILNRSIVETFVCLIPKKENAIRVKES-RPISLITNVYKILAKVLANRLRKVMPST 567
             K GIL  S  E  + LIPK       KE+ RPISL+    KIL K+LANR+++ +   
Sbjct: 499 IEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKL 558

Query: 568 IFKLQGAFLAGRQILDQALIANKAIED-THMKKKDGVVLKLD-----------FLDKVMM 627
           I   Q  F+ G Q       +   I+     K K+ V++ +D           F+ K + 
Sbjct: 559 IHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLN 618

Query: 628 KKGFGFRCRMGMWGCIRNVQY-----SILINGTLKGSIQASRGLRQGDPLSPFLFLLVVD 677
           K G       GM+  I    Y     +I++NG    +     G RQG PLSP LF +V++
Sbjct: 619 KLGID-----GMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLE 678

[Close]

BLAST of Clc01G12510 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-15
Identity = 82/305 (26.89%), Postives = 138/305 (45.25%), Query Frame = 0


Query: 393 RRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSPTIQE----KLFVEGIEWSPISS 452
           +R ++ I ++   N   T++  E ++ +   + KLYS   +       ++E      +S 
Sbjct: 383 KRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQ 442

Query: 453 REDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFKEFFKRG 512
           +E E L    +  EI   + +  + KSPG D FT  F+      +   L  +F+   K G
Sbjct: 443 KEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEG 502

Query: 513 ILNRSIVETFVCLIPKK-ENAIRVKESRPISLITNVYKILAKVLANRLRKVMPSTIFKLQ 572
           IL  +  E  + LIPK  ++  R +  RPISL+    KIL K+L NR+++ +   I   Q
Sbjct: 503 ILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQ 562

Query: 573 GAFLAGRQILDQALIANKAIEDTH-MKKKDGVVLKLD-----------FLDKVMMKKGFG 632
             F+ G Q       +   I+  + +K KD ++L +D           F+ + + K G  
Sbjct: 563 VGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIE 622

Query: 633 FRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLFLLVVDVLSQLI---- 676
                 +         +I++NG    S     G RQG PLSP LF +V++VL+  I    
Sbjct: 623 GTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIREEK 682

[Close]

BLAST of Clc01G12510 vs. ExPASy Swiss-Prot
Match: Q03278 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 9.5e-08
Identity = 58/237 (24.47%), Postives = 100/237 (42.19%), Query Frame = 0


Query: 443 WSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFK 502
           W PIS+ E +E+ A               +  + G D  T    +  WN +   ++ +F 
Sbjct: 316 WRPISNDEIKEVEAC--------------KRTAAGPDGMT----TTAWNSIDECIKSLFN 375

Query: 503 EFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLITNVYKILAKVLANRLRKVMPST 562
                G   R  +++   LIPK+   +     RP+S+ +   +   ++LANR+ +     
Sbjct: 376 MIMYHGQCPRRYLDSRTVLIPKEPGTMDPACFRPLSIASVALRHFHRILANRIGE--HGL 435

Query: 563 IFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVLKLD------------FLDKVMM 622
           +   Q AF+    + +   + +  I++  MK K   +  LD             LD +  
Sbjct: 436 LDTRQRAFIVADGVAENTSLLSAMIKEARMKIKGLYIAILDVKKAFDSVEHRSILDALRR 495

Query: 623 KKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLFLLVVDVL 668
           KK      R  +    RN +  + +  T    I+ +RG+RQGDPLSP LF  V+D +
Sbjct: 496 KK-LPLEMRNYIMWVYRNSKTRLEVVKTKGRWIRPARGVRQGDPLSPLLFNCVMDAV 531

[Close]

BLAST of Clc01G12510 vs. ExPASy TrEMBL
Match: A0A438BZ22 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_121 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 7.9e-98
Identity = 228/643 (35.46%), Postives = 307/643 (47.74%), Query Frame = 0


Query: 265 RDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSGLVDLL 324
           R  FW EL D+FG     W V GDFNVIR   EK     +T SM+ F+ FI D  L+D  
Sbjct: 116 RQDFWVELSDIFGLSSPCWWVGGDFNVIRRSSEKLGGSSLTPSMKDFDDFIRDCELIDSP 175

Query: 325 LVDGKFTWANSR---AATRIDRFLAAKDW------------------------------- 384
           L    FTW+N +      R+DRFL + +W                               
Sbjct: 176 LRSAPFTWSNLQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLPRWTLAHWPIVLETNPFKW 235

Query: 385 ------------------------------------------------------------ 444
                                                                       
Sbjct: 236 GPTPFRFENMWLQHPSFKESFGSWWREFQGNGWEGHKFMRKLQFVKAKLKEWNKDSFGEL 295

Query: 445 IGRKKEILARIDEIDALELEGPLVSPLKV------------------------------- 504
             RKK IL+ +   D LE EG L   L V                               
Sbjct: 296 NERKKSILSDLANFDTLEQEGGLSPKLLVQRALRKGELEELILREEIHWRKKARVKWVKE 355

Query: 505 -DCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSPTIQEKLFV 564
            DCN+++FH+VA+GRRNR  I  L  E  +  +N +  KEEIL  F KLY+   +E   V
Sbjct: 356 GDCNSNFFHKVANGRRNRKFIKVLENERALMLNNSESIKEEILRYFEKLYASPSEEPWRV 415

Query: 565 EGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVKGDLE 624
           EG++WSPIS      L + FT EEI KA+F  DR+K+PG DDFT+A F D W ++K DL 
Sbjct: 416 EGLDWSPISGESASRLESPFTEEEISKAIFQLDRDKAPGPDDFTIAVFQDCWEVIKEDLV 475

Query: 625 GVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLITNVYKILAKVLANRLRKV 684
            VF +F + GI+N+S   +F+ L+PKK  + ++    PISLIT++YKI+ KVLA  LR+V
Sbjct: 476 RVFAKFHRSGIINQSTNASFIVLLPKKSMSKKISYYIPISLITSLYKIIVKVLARHLREV 535

Query: 685 MPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVLKLD-----------FLDK 744
           +  TI   QGAF+ GRQILD  LIAN+ + +     ++GVV K+D           FLD 
Sbjct: 536 LHKTIHSTQGAFVQGRQILDAVLIANEIVNEKRRSGEEGVVFKIDFEKAYDHVSWGFLDH 595

[Close]

BLAST of Clc01G12510 vs. ExPASy TrEMBL
Match: A0A438KQT0 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_525 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.3e-97
Identity = 219/583 (37.56%), Postives = 296/583 (50.77%), Query Frame = 0


Query: 241 IENPGWAALPLVGIKQLKSPEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTS 300
           + N  W  LP  G        P  R  FW EL D+ G     WCV GDFNVIR   EK  
Sbjct: 76  VRNKDWDFLPACGASVYGPNSPSLRKDFWVELYDICGLTFPLWCVGGDFNVIRRSSEKLG 135

Query: 301 RGRITSSMRSFNKFIDDSGLVDLLLVDGKFTWAN---SRAATRIDRFLAAKDW------- 360
             R+TSSMR F+ FI +S L+D  L +  FTW+N   S    R+DRFL + +W       
Sbjct: 136 GSRLTSSMRDFDSFISESELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGQLFPQG 195

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 196 TQETLIRRTSDHWPIALDTNPFTWGPTPFRFENMWLQHPSFKENFRNWWRGFQGNGWEGH 255

Query: 421 ------------------------IGRKKEILARIDEIDALELEGPLVSPL--------- 480
                                     +KK IL  +  +DA+E +G L S L         
Sbjct: 256 KFMRRLQFVKAKAKEWNKLSFGVLNEKKKSILKDLANLDAIEQDGGLTSELLGQRALRKG 315

Query: 481 -----------------------KVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDK 540
                                  + DCN+ +FH+VA+GRRNR +I +L  E G+  +N  
Sbjct: 316 ELEDLILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKYIKSLENETGLVLNNAM 375

Query: 541 ETKEEILLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNK 600
              EEILL F KLY+  I E   +EG++WSPIS      LVA FT EEI KA+F  DR+K
Sbjct: 376 SITEEILLYFEKLYANPIGESWSIEGLDWSPISEESAISLVAPFTEEEISKAIFKMDRDK 435

Query: 601 SPGLDDFTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKES 660
           +PG D FT+A F D W+++K DL  VF EF + G++N+S   +F+ L+PKK    ++ + 
Sbjct: 436 APGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGVINQSTNASFIVLLPKKSTTKKISDF 495

Query: 661 RPISLITNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKK 687
           RPISLIT++YKI+AKVL+ RLR V+  TI   QGAF+ GRQI+D  LIAN+ +++     
Sbjct: 496 RPISLITSLYKIIAKVLSGRLRGVLHETIHSTQGAFVQGRQIMDAVLIANEIVDERRRSG 555

[Close]

BLAST of Clc01G12510 vs. ExPASy TrEMBL
Match: A5BS85 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_000894 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.9e-97
Identity = 208/468 (44.44%), Postives = 270/468 (57.69%), Query Frame = 0


Query: 262  PRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSGLV 321
            P  R  FW EL DLFG     WCV GDFNVIR   EK    R+TSSMR F+ FI +S L 
Sbjct: 737  PPIRKEFWVELSDLFGLTYPSWCVGGDFNVIRRKSEKLGGSRVTSSMRDFDGFIRESELH 796

Query: 322  DLLLVDGKFTWANSRAATRIDRFLAAKDWIGRKKEILARIDEIDALELEGPLVSPLKV-- 381
            D  L +  FTW+N + +              RKK I   I  IDA+E EG L S L    
Sbjct: 797  DPPLRNASFTWSNMQESPE------------RKKTISDEIANIDAIEQEGALSSDLAAQR 856

Query: 382  ------------------------------DCNTSYFHRVASGRRNRNHIGTLVLENGVR 441
                                          DCN+  FH+VA+GRRN+N I  L  E G+ 
Sbjct: 857  AIRKGELEELILREEIHWKQKAKIKWVKEGDCNSKLFHKVANGRRNKNFIKILENERGLV 916

Query: 442  TSNDKETKEEILLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFS 501
              + +   EEILL F KLYS   +E   VEGI+WSPIS      L + F   EI  A+F 
Sbjct: 917  LDSSESITEEILLYFKKLYSCPTRESWRVEGIDWSPISEESASRLDSPFAEAEIFNAIFQ 976

Query: 502  SDRNKSPGLDDFTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAI 561
             DR+K+PG D FT+A F D W+++K DL  VF EF   GI+N++   +F+ L+PKK  + 
Sbjct: 977  LDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIVLLPKKSQSK 1036

Query: 562  RVKESRPISLITNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIED 621
            ++ + RPISLIT +YKI+AKVL+ RLR V+  TI   QGAF+ GRQILD  LI N+ +++
Sbjct: 1037 KISDFRPISLITCLYKIIAKVLSGRLRGVLQETIHSTQGAFVQGRQILDAVLITNEIVDE 1096

Query: 622  THMKKKDGVVLKL-----------DFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGT 681
                 ++GVV K+           DFLD V+ KKGF  R R  M GC+ +V Y+IL+NG 
Sbjct: 1097 KKRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRSWMRGCLSSVSYAILVNGN 1156

Query: 682  LKGSIQASRGLRQGDPLSPFLFLLVVDVLSQLIVKGVEGNIIEPFREG 687
             KG ++A+RGLRQGDPLSPFLF +V DVLS++++K  E N++E FR G
Sbjct: 1157 AKGWVKAARGLRQGDPLSPFLFTIVADVLSRMLLKAEERNLLEGFRVG 1192

[Close]

BLAST of Clc01G12510 vs. ExPASy TrEMBL
Match: A5BS85 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_000894 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-03
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 686  GLEIDILRTRNRALLAMWLWRFPLEPEALWCRIIVSKHGSHPFDW 731
            GL I  +  RNRALL  WLWRFP E  +LW ++I+S +G+H   W
Sbjct: 1373 GLGIGKIPLRNRALLGKWLWRFPRESTSLWHQVILSIYGTHSNGW 1417

HSP 2 Score: 361.7 bits (927), Expect = 7.4e-96
Identity = 222/498 (44.58%), Postives = 286/498 (57.43%), Query Frame = 0


Query: 260 PEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSG 319
           P   GR+ FWEEL DL+ Y G RWCV GDFNV+ SP+EK   G+IT S+R FN FIDDSG
Sbjct: 226 PRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSG 285

Query: 320 LVDLLLVDGKFTWANSRAATRIDRFLAAKDWIGR-------------------KKEILAR 379
           L D  L++GKFT AN RA+TRIDR L +K WI R                   KKE +AR
Sbjct: 286 LFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERFGTLGREFGFWWNTVSKAKKKENVAR 345

Query: 380 IDEIDALELEGPLVSPLKVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEI 439
           I++ID LEL GP                               LENG+            
Sbjct: 346 INDIDYLELNGP-------------------------------LENGL------------ 405

Query: 440 LLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDD 499
                      ++E+  V+      IS REDEE V  FT+E I K VF+ D N++ G D 
Sbjct: 406 -----------VEERFSVKWSLDEAISPREDEEHVVPFTIEVIEKVVFNCDGNRALGADG 465

Query: 500 FTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLI 559
           F+MAFF D+W+L+KGDLEGVFKEFF+RGILN+ +VETFVCLIPKK+NA +VK+ +PISLI
Sbjct: 466 FSMAFFQDDWDLIKGDLEGVFKEFFERGILNKLVVETFVCLIPKKDNANKVKDFQPISLI 525

Query: 560 TNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVL 619
           T+VYKILAKVLAN LRKV+P  +   + AFL  R+ILDQALI+N+AIE+           
Sbjct: 526 TSVYKILAKVLANCLRKVLPLNLSDYRKAFLPRRKILDQALISNEAIEEYR--------- 585

Query: 620 KLDFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLF 679
            + F + +  K     + R+  W   +N  +S     TL  S     G+ +G       +
Sbjct: 586 AMSFWNPIYEK----IQKRLATW---KNGFFSKAGKLTLIKS-----GVVEGHD----SY 633

Query: 680 LLVVDVLSQLIVKGVEGNIIEPFREGLEIDILRTRNRALLAMWLWRFPLEPEALWCRIIV 739
           L+ ++ +   + +G           GL +  LR RNRALLA WLW F LEP++LW RII+
Sbjct: 646 LISLEAVGLPVSQG-----------GLGVGNLRIRNRALLAKWLWCFHLEPDSLWNRIIL 633

[Close]

BLAST of Clc01G12510 vs. ExPASy TrEMBL
Match: A0A5D3DEZ6 (Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00210 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.6e-95
Identity = 222/498 (44.58%), Postives = 281/498 (56.43%), Query Frame = 0


Query: 260 PEPRGRDAFWEELRDLFGYYGSRWCVAGDFNVIRSPEEKTSRGRITSSMRSFNKFIDDSG 319
           P   GR+ FWEEL DL+ Y G RWCV GDFNV+ SP+EK   G+IT S+R FN FIDDSG
Sbjct: 176 PRISGRNLFWEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSG 235

Query: 320 LVDLLLVDGKFTWANSRAATRIDRFLAAKDWIGR-------------------KKEILAR 379
           L D  L++GKFT AN RA+TRIDR L +K WI R                   KKE +AR
Sbjct: 236 LFDPPLIEGKFTCANCRASTRIDRVLMSKAWIERFGTLGREFGFWWNTVSKAKKKENVAR 295

Query: 380 IDEIDALELEGPLVSPLKVDCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEI 439
           I++ID LEL GP                               LENG+            
Sbjct: 296 INDIDYLELNGP-------------------------------LENGL------------ 355

Query: 440 LLAFSKLYSPTIQEKLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDD 499
                      ++E+  V+      IS REDEE V  FT+E I K VF+ D N++ G D 
Sbjct: 356 -----------VEERFSVKWSLDEAISPREDEEHVVPFTIEVIEKVVFNCDGNRALGADG 415

Query: 500 FTMAFFSDNWNLVKGDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLI 559
           F+MAFF D+W+L+KGDLEGVFKEFF+RGILN+ +VETFVCLIPKK+NA +VK+ +PISLI
Sbjct: 416 FSMAFFQDDWDLIKGDLEGVFKEFFERGILNKLVVETFVCLIPKKDNANKVKDFQPISLI 475

Query: 560 TNVYKILAKVLANRLRKVMPSTIFKLQGAFLAGRQILDQALIANKAIEDTHMKKKDGVVL 619
           T+VYKILAKVLAN LRKV+P  +   + AFL  R+ILDQALI+N+AIE+           
Sbjct: 476 TSVYKILAKVLANCLRKVLPLNLSDYRKAFLPRRKILDQALISNEAIEEYR--------- 535

Query: 620 KLDFLDKVMMKKGFGFRCRMGMWGCIRNVQYSILINGTLKGSIQASRGLRQGDPLSPFLF 679
            + F + +  K     + R+  W   +N  +S     TL  S+ +           P  +
Sbjct: 536 AMSFWNPIYEK----IQKRLATW---KNGFFSKAGKLTLIKSVLSD---------IPMYY 579

Query: 680 LLVVDVLSQLIVKGVEGNIIEPFREGLEIDILRTRNRALLAMWLWRFPLEPEALWCRIIV 739
           L +V   S                 GL +  LR RNRALLA WLW F LEP++LW RII+
Sbjct: 596 LSLVRASS---------------GGGLGVGNLRIRNRALLAKWLWCFHLEPDSLWNRIIL 579

[Close]

BLAST of Clc01G12510 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 5.2e-17
Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 0


Query: 380 DCNTSYFHRVASGRRNRNHIGTLVLENGVRTSNDKETKEEILLAFSKLYSP-----TIQE 439
           D NT +FH+V    + +N I  L +++ VR  N  + KE I+  ++ L        T   
Sbjct: 448 DANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDS 507

Query: 440 KLFVEGIEWSPISSREDEELVALFTLEEIRKAVFSSDRNKSPGLDDFTMAFFSDNWNLVK 499
              ++ I     +      L AL + +EI  AVF+  RNK+PG D FT  FF ++W +VK
Sbjct: 508 VQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVK 567

Query: 500 GDLEGVFKEFFKRGILNRSIVETFVCLIPKKENAIRVKESRPISLITNVYKIL 548
                  KEFF+ G L +    T + LIPK     ++   RP+S  T VYKI+
Sbjct: 568 DSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620

[Close]

BLAST of Clc01G12510 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 51.6 bits (122), Expect = 3.2e-06
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 634 LINGTLKGSIQASRGLRQGDPLSPFLFLLVVDVLSQLIVKGVE 677
           +ING  +G +  SRGLRQGDPLSP+LF+L  +VLS L  +  E
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQE 55

The following BLAST results are available for this feature:

BLAST of Clc01G12510 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW16207.1	1.6e-97	35.46	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVX23556.1	4.8e-97	37.56	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
CAN74944.1	8.1e-97	44.44	hypothetical protein VITISV_000894 [Vitis vinifera]	[more]
KAA0032235.1	1.5e-95	44.58	peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]	[more]
TYK22164.1	3.4e-95	44.58	peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Clc01G12510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	5.6e-24	27.27	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P11369	4.6e-18	26.46	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
O00370	6.0e-18	28.80	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P08548	1.2e-15	26.89	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
Q03278	9.5e-08	24.47	Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra...	[more]

BLAST of Clc01G12510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438BZ22	7.9e-98	35.46	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438KQT0	2.3e-97	37.56	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A5BS85	3.9e-97	44.44	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A5BS85	2.5e-03	51.11	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A5D3DEZ6	1.6e-95	44.58	Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa...	[more]

BLAST of Clc01G12510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	5.2e-17	33.53	DNAse I-like superfamily protein	[more]
ATMG01250.1	3.2e-06	55.81	RNA-directed DNA polymerase (reverse transcriptase)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 522..674 e-value: 3.0E-18 score: 66.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 246..364 e-value: 8.9E-14 score: 53.8
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 264..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 380..683
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 380..683
None	No IPR available	CDD	cd01650	RT_nLTR_like	coord: 516..682 e-value: 2.15119E-33 score: 125.867
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 462..673

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G12510.2	Clc01G12510.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003824	catalytic activity