Homology
BLAST of Clc01G11200 vs. NCBI nr
Match:
XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])
HSP 1 Score: 1366.7 bits (3536), Expect = 0.0e+00
Identity = 678/704 (96.31%), Postives = 694/704 (98.58%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTL NSSRLFKLNPIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
YAPQETHNP+PS+DEISKYPDGKS SSSKSSVWVNPRSPRASKLRKQSYEARY SLTRIS
Sbjct: 61 YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDSCNPC+EDVADVLK IGSNIL+QDAVVVLNNMSNSQTAL+ALRYFQDVLKSSKQ I
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEML+RGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYV EAVEVFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCV RANPKLGFVV+LL+GEQ+K
Sbjct: 481 RTFSRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVKLLMGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQ+YKDLQSRS
Sbjct: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQLYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSLYLKGLSLGA LTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAGLTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of Clc01G11200 vs. NCBI nr
Match:
XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
++PQETHN PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of Clc01G11200 vs. NCBI nr
Match:
XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])
HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 679/704 (96.45%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
+APQ+T N PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARY SL R+S
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of Clc01G11200 vs. NCBI nr
Match:
XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])
HSP 1 Score: 1282.7 bits (3318), Expect = 0.0e+00
Identity = 638/704 (90.62%), Postives = 663/704 (94.18%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLCHSPSTFF+DHH LSNSL SQ + TL SS FKLNP P HSK L+ITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
YA QE NP P+ DE SKYPDGKS SSSKSSVWVNPRSPRASKLR QSYEARY SLTRIS
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDSCNPCEEDVADVLK +GSNILEQDAV VLNNMSNS TAL+AL+ FQ VLKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
YNVTLKV RK RDMEGAEKLF+EML+RGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+F+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGK K VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERAN KLG+VV+LLLGEQ+K
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EGD RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELL+LGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSL+LKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of Clc01G11200 vs. NCBI nr
Match:
KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 634/705 (89.93%), Postives = 664/705 (94.18%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTL-YNSSRLFKLNPIPRHSKPFLQITNVSLQ 60
MAFQL H PSTFFTDH NSLT KTTL +SSR+FKLNPIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 61 EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 120
EYAPQET NP+PSDDEISK+PDGKSGSSSK+SVWVNP SPRASKLRKQSYEARY SL +I
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 180
SESLDSCNPCE+DVADVLK I S ILEQDA+ VLNNMSNSQTAL+ LRYFQDVLKSSKQ
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180
Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
+FYNVTLKVFRKCRD EGAEKLF+EMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
LLRAY RARY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+EVF+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 480
TCSPDSWTFSSMITIYSCSG VSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGKAK VDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 540
VRTF+RLLELGLTPDDRFCGCLLNVITQTPK ELSKLIDCVERANPKLGFVV+LLLGE++
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 600
EGDFRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELL+LGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 660
SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKG++S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 661 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
VFESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of Clc01G11200 vs. ExPASy Swiss-Prot
Match:
Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)
HSP 1 Score: 936.8 bits (2420), Expect = 1.4e-271
Identity = 463/702 (65.95%), Postives = 565/702 (80.48%), Query Frame = 0
Query: 5 LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 64
LC SPS+ D L N L+ K+T + + N HS+ LQ T+VS+QE PQ
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 65 ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 124
+ D P ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNV 184
+C P E DV DV+ G + EQDAVV LNNM+N +TA + L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 185 TLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
T+KVFRK +D+E +EKLF+EMLERG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 245 CNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
C PD+VT +AMIDAYGRAGNVDMA SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 365 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 424
GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA E+FQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFN 484
SWTFSS+IT+Y+CSG+VSEAE L +M EAGF+P +FVLTS+IQCYGKAK VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 485 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE-KEGD 544
++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CVE+A PKLG VV++L+ EQ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 604
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L+LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGMASVFE 664
WSL+LK LSLGAALTALHVW+NDL++ LESGEE PPLLGINTGHGKHKYSDKG+A+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 665 SHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
SHLKEL APFHEAPDKVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of Clc01G11200 vs. ExPASy Swiss-Prot
Match:
Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)
HSP 1 Score: 720.7 bits (1859), Expect = 1.6e-206
Identity = 368/674 (54.60%), Postives = 477/674 (70.77%), Query Frame = 0
Query: 36 RLFKLNPIPRHSKPFLQITNVSLQEYAPQETH-NPTPSDDEISKYPDGKSGSSSKSSVWV 95
R L+ P++ P VS+Q+ P + NP+P G+S ++S+ VWV
Sbjct: 13 RAISLSFQPKNPSPSPATARVSVQDPPPPPSDANPSP----------GRSSNTSR-YVWV 72
Query: 96 NPRSPRASKL-RKQSYEARYTSLTRISESLDSCNPCEEDVADVLK-VIGSNILEQDAVVV 155
NP SPRA+ L R ++ R L + +L +C E VA L+ EQDAV+V
Sbjct: 73 NPNSPRAAGLARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIV 132
Query: 156 LNNMSNSQTALI-ALRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVK 215
LN S A++ AL +F + K+ I YNV LK RK R AE L+EEML GV+
Sbjct: 133 LNTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQ 192
Query: 216 PDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSL 275
PDN TFST+ISCAR C +P KAVEWFEKMP F C+PD +TYSA+IDAYGRAG+ + A L
Sbjct: 193 PDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRL 252
Query: 276 YDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGR 335
YDRAR E W++DP +T+I++H +GN+DG LNV+EEMKA G+KPNLV+YN++LDAMGR
Sbjct: 253 YDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGR 312
Query: 336 AKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVIL 395
A RPW +KTI++E++ P+ ATY LL AY RARYGEDA+ VY+ MK++ + ++V+L
Sbjct: 313 AMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVL 372
Query: 396 YNTLLAMCADVGYVNEAVEVFQDMKSS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLN 455
YN LL+MCAD+GYV EA E+F+DMK+S PDSW++SSM+T+YSC+G V+ AE +LN
Sbjct: 373 YNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILN 432
Query: 456 EMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTP 515
EMVEAGF PNIF+LTSLI+CYGKA DDVVR+F L +LG+TPDDRFCGCLL V TP
Sbjct: 433 EMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTP 492
Query: 516 KEELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLID 575
+EL K+I C++R++ +LG VV LL+ R A EL VR YCNCL+D
Sbjct: 493 ADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMD 552
Query: 576 LCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTK 635
L VNL ++KAC LL++ L L IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW++DL
Sbjct: 553 LAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYA 612
Query: 636 VLESGEELPPLLGINTGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAA 695
L++G+ELPPLLGI+TG GK+ YS KG+A+VFESHLKEL APFHEAPDK GWFLTT VAA
Sbjct: 613 ALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAA 672
Query: 696 KSWLESRASPELVA 704
+ WLE++ S ELVA
Sbjct: 673 RHWLETKKSAELVA 675
BLAST of Clc01G11200 vs. ExPASy Swiss-Prot
Match:
B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)
HSP 1 Score: 719.9 bits (1857), Expect = 2.7e-206
Identity = 379/709 (53.46%), Postives = 488/709 (68.83%), Query Frame = 0
Query: 5 LCHSPSTFFTD--HHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYA 64
LC SPS+ H +S S + + +P+ H VS+QE
Sbjct: 6 LCRSPSSLLPSWPHRPISASFNPKNPS-----------SPVAAH---------VSVQETP 65
Query: 65 PQETHNPTPSDDEISKYPDGKSGSSSKSS--VWVNPRSPRASKL-RKQSYEARYTSLTRI 124
PQ PSD P+G SSS ++ +WVNP SPRA+ + R ++ R L
Sbjct: 66 PQPQDPSPPSDSN----PNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASA 125
Query: 125 SESLDSCNPCEEDVADVLK-VIGSNILEQDAVVVLNN--MSNSQTALIALRYFQDVLKSS 184
+ +L +C E V L+ EQDAV+VLN + ++TA++ALR+F K
Sbjct: 126 AAALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVR 185
Query: 185 KQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEW 244
K+ I YNV LK+ RK R E L+ EML GV+PDN TFST+ISCAR C L +KAVEW
Sbjct: 186 KKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEW 245
Query: 245 FEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGV 304
F+KMP F C+PD +TYSA+IDAYG AGN + A LYDRAR E W++DP ST+IK+H
Sbjct: 246 FDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHST 305
Query: 305 AGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWAT 364
+GN+DG LNV+EEMKAIG++PNLV+YN++LDAMGRA RPW +KTI++EM+ PS AT
Sbjct: 306 SGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRAT 365
Query: 365 YASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMK 424
Y LL AY RARYGEDA+ VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA E+F+DMK
Sbjct: 366 YCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMK 425
Query: 425 SS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAK 484
+S PDSW++SSM+T+YS + V AE +LNEMVEAGF PNIFVLTSLI+CYGK
Sbjct: 426 ASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVG 485
Query: 485 HVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELL 544
DDVVR+F L +LG+ PDDRFCGCLL+V TP EEL K+I C+ER+N +LG VV+LL
Sbjct: 486 RTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLL 545
Query: 545 LGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYK 604
+ E FR A EL V+ YCNCL+DLCVNL+ ++KAC LL+ L IY
Sbjct: 546 VDRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYA 605
Query: 605 DLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEE-LPPLLGINTGHGKHKYS 664
++Q+R+ TQWSL+L+GLS+GAALT LHVW+NDL L++G E LPPLLGI+TG GK+ YS
Sbjct: 606 NIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYS 665
Query: 665 DKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 703
D+G+A++FE+HLKEL APFHEAPDK GWFLTT VAAK WLES+A+ ELV
Sbjct: 666 DRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689
BLAST of Clc01G11200 vs. ExPASy Swiss-Prot
Match:
Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)
HSP 1 Score: 471.1 bits (1211), Expect = 2.2e-131
Identity = 269/715 (37.62%), Postives = 408/715 (57.06%), Query Frame = 0
Query: 2 AFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLN--------PIPRHSKPFLQI 61
A +C +P T HSL K +L+ SR KLN P +P
Sbjct: 8 AIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTK 67
Query: 62 TNVSLQEYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQ------ 121
T ++ P +I P SVWVNP P+ S L Q
Sbjct: 68 TPSLSEQLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSA 127
Query: 122 -SYEARYTSLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQTALIA 181
SY + L + L+S E+ + +L I +A++VLN++ Q
Sbjct: 128 YSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTF 187
Query: 182 LRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCAR 241
+ + +TIFYNVT+K R R + E++ EM++ GV+ DN+T+STII+CA+
Sbjct: 188 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 247
Query: 242 LCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPA 301
C+L NKA+EWFE+M PD+VTYSA++D Y ++G V+ SLY+RA W+ D
Sbjct: 248 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 307
Query: 302 TFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEM 361
FS + K+ G AG+YDG V +EMK++ +KPN+V+YN+LL+AMGRA +P ++++ EM
Sbjct: 308 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 367
Query: 362 IKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYV 421
++ G +P+ T +L++ YG+AR+ DAL +++EMK K ++ ILYNTLL MCAD+G
Sbjct: 368 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 427
Query: 422 NEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTS 481
EA +F DMK S C PD++++++M+ IY GK +A E+ EM++AG N+ T
Sbjct: 428 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 487
Query: 482 LIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVERAN 541
L+QC GKAK +DDVV F+ ++ G+ PDDR CGCLL+V+ E+ K++ C+ERAN
Sbjct: 488 LVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERAN 547
Query: 542 PKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL 601
KL V L++ E+ + + E + + + R+ +CNCLID+C + ++A ELL
Sbjct: 548 KKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELL 607
Query: 602 ELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGIN 661
LG +Y L +++ +WSL ++ LS+GAA TAL W+ L +++ EELP L
Sbjct: 608 YLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQ 667
Query: 662 TGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASP 700
TG G H++S +G+A+ F HL++L APF ++ D+ G F+ TK SWLES+ P
Sbjct: 668 TGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of Clc01G11200 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 5.2e-48
Identity = 149/591 (25.21%), Postives = 284/591 (48.05%), Query Frame = 0
Query: 143 NILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQ--TIFYNVTLKVFRKCRDMEGAEK 202
N++ +AV+ + +A ++F ++ ++ Q I +N L V + E A
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVA-KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 361
Query: 203 LFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYG 262
LF+EM R ++ D +++T++ + A E +MP P+ V+YS +ID +
Sbjct: 362 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 421
Query: 263 RAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLV 322
+AG D A +L+ R +D +++T++ I+ G + L++ EM ++GIK ++V
Sbjct: 422 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 481
Query: 323 IYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEM 382
YN+LL G+ + ++K ++ EM + P+ TY++L+ Y + ++A+ +++E
Sbjct: 482 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 541
Query: 383 KEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI------ 442
K GL+ +V+LY+ L+ G V AV + +M G SP+ T++S+I
Sbjct: 542 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSAT 601
Query: 443 ------YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLI---------QCYGKAKHVDDV 502
YS G + + L+ + E + I + L C + + +
Sbjct: 602 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 661
Query: 503 VRTFNRLLELGLTPDDRFCGCLLNVITQTPK-EELSKLIDCVERANPKL-GFVVELLLGE 562
+ F ++ +L + P+ +LN ++ E+ S L++ + + K+ G V LL+G+
Sbjct: 662 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQ 721
Query: 563 QEKEGDFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLEL-GLTLQIY 622
+E + +A LF V+ A+ N L D+ + + EL+ L G + Q++
Sbjct: 722 RE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVW 781
Query: 623 KDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK-- 682
+++ S S L L +S GAA +H W+ ++ ++ G ELP +L I TG GKH
Sbjct: 782 ENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKV 841
Query: 683 YSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 703
D + E L+ + APFH + +G F ++ +WL A+ +L+
Sbjct: 842 VGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882
BLAST of Clc01G11200 vs. ExPASy TrEMBL
Match:
A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)
HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
++PQETHN PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of Clc01G11200 vs. ExPASy TrEMBL
Match:
A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)
HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 664/704 (94.32%), Postives = 685/704 (97.30%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLCHSP TFFT HHSLSNSLT QRKTTL NSS LFKLNPIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
++PQETHN PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARY SL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of Clc01G11200 vs. ExPASy TrEMBL
Match:
A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)
HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 679/704 (96.45%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
+APQ+T N PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARY SL R+S
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTAL+ALRYFQD+LKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAK VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVVELLLGEQ+K
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR+SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of Clc01G11200 vs. ExPASy TrEMBL
Match:
A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)
HSP 1 Score: 1282.7 bits (3318), Expect = 0.0e+00
Identity = 638/704 (90.62%), Postives = 663/704 (94.18%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
MAFQLCHSPSTFF+DHH LSNSL SQ + TL SS FKLNP P HSK L+ITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 61 YAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRIS 120
YA QE NP P+ DE SKYPDGKS SSSKSSVWVNPRSPRASKLR QSYEARY SLTRIS
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTI 180
ESLDSCNPCEEDVADVLK +GSNILEQDAV VLNNMSNS TAL+AL+ FQ VLKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
YNVTLKV RK RDMEGAEKLF+EML+RGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+F+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGK K VDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEK 540
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERAN KLG+VV+LLLGEQ+K
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRS 600
EGD RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELL+LGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMASV 660
PTQWSL+LKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKG+ASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
FESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of Clc01G11200 vs. ExPASy TrEMBL
Match:
A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 633/705 (89.79%), Postives = 661/705 (93.76%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNS-SRLFKLNPIPRHSKPFLQITNVSLQ 60
MAFQL H PSTFFTDH NSLT KTTL S SR+FKLNPIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 61 EYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRI 120
EYAPQET NP+PSDDEISK+PDGKSGSSSK+SVWVNP SPRASKLRKQSYEARY SL +I
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQT 180
SESLDSCNPCE DVADVLK I S ILEQDA+ VLNNMSNSQTAL+ RYFQDVLKSSKQ
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
+FYNVTLKVFRKCRD EGAEKLF+EMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 361 LLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
LLRAY RARY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+EVF+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDV 480
TCSPDSWTFSSMITIYSCSG VSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGKAK VDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE 540
VRTF+RLLELGLTPDDRFCGCLLNVITQTPK ELSKLIDCVERANPKLGFVV+LLLGE++
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSR 600
EGDFRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELL+LGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGMAS 660
SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKG++S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 661 VFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
VFESHLKEL APFHEAP+KVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of Clc01G11200 vs. TAIR 10
Match:
AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 936.8 bits (2420), Expect = 1.0e-272
Identity = 463/702 (65.95%), Postives = 565/702 (80.48%), Query Frame = 0
Query: 5 LCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLNPIPRHSKPFLQITNVSLQEYAPQ 64
LC SPS+ D L N L+ K+T + + N HS+ LQ T+VS+QE PQ
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 65 ETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYTSLTRISESLD 124
+ D P ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNV 184
+C P E DV DV+ G + EQDAVV LNNM+N +TA + L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 185 TLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
T+KVFRK +D+E +EKLF+EMLERG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 245 CNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
C PD+VT +AMIDAYGRAGNVDMA SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 365 GRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 424
GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA E+FQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKHVDDVVRTFN 484
SWTFSS+IT+Y+CSG+VSEAE L +M EAGF+P +FVLTS+IQCYGKAK VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 485 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQE-KEGD 544
++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CVE+A PKLG VV++L+ EQ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKDLQSRSPTQ 604
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L+LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGMASVFE 664
WSL+LK LSLGAALTALHVW+NDL++ LESGEE PPLLGINTGHGKHKYSDKG+A+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 665 SHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELVAA 705
SHLKEL APFHEAPDKVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of Clc01G11200 vs. TAIR 10
Match:
AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 471.1 bits (1211), Expect = 1.6e-132
Identity = 269/715 (37.62%), Postives = 408/715 (57.06%), Query Frame = 0
Query: 2 AFQLCHSPSTFFTDHHSLSNSLTSQRKTTLYNSSRLFKLN--------PIPRHSKPFLQI 61
A +C +P T HSL K +L+ SR KLN P +P
Sbjct: 8 AIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTK 67
Query: 62 TNVSLQEYAPQETHNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQ------ 121
T ++ P +I P SVWVNP P+ S L Q
Sbjct: 68 TPSLSEQLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSA 127
Query: 122 -SYEARYTSLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQTALIA 181
SY + L + L+S E+ + +L I +A++VLN++ Q
Sbjct: 128 YSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTF 187
Query: 182 LRYFQDVLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMLERGVKPDNVTFSTIISCAR 241
+ + +TIFYNVT+K R R + E++ EM++ GV+ DN+T+STII+CA+
Sbjct: 188 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 247
Query: 242 LCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPA 301
C+L NKA+EWFE+M PD+VTYSA++D Y ++G V+ SLY+RA W+ D
Sbjct: 248 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 307
Query: 302 TFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEM 361
FS + K+ G AG+YDG V +EMK++ +KPN+V+YN+LL+AMGRA +P ++++ EM
Sbjct: 308 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 367
Query: 362 IKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYV 421
++ G +P+ T +L++ YG+AR+ DAL +++EMK K ++ ILYNTLL MCAD+G
Sbjct: 368 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 427
Query: 422 NEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTS 481
EA +F DMK S C PD++++++M+ IY GK +A E+ EM++AG N+ T
Sbjct: 428 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 487
Query: 482 LIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVERAN 541
L+QC GKAK +DDVV F+ ++ G+ PDDR CGCLL+V+ E+ K++ C+ERAN
Sbjct: 488 LVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERAN 547
Query: 542 PKLGFVVELLLGEQEKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL 601
KL V L++ E+ + + E + + + R+ +CNCLID+C + ++A ELL
Sbjct: 548 KKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELL 607
Query: 602 ELGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGIN 661
LG +Y L +++ +WSL ++ LS+GAA TAL W+ L +++ EELP L
Sbjct: 608 YLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQ 667
Query: 662 TGHGKHKYSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASP 700
TG G H++S +G+A+ F HL++L APF ++ D+ G F+ TK SWLES+ P
Sbjct: 668 TGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of Clc01G11200 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 194.1 bits (492), Expect = 3.7e-49
Identity = 149/591 (25.21%), Postives = 284/591 (48.05%), Query Frame = 0
Query: 143 NILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQ--TIFYNVTLKVFRKCRDMEGAEK 202
N++ +AV+ + +A ++F ++ ++ Q I +N L V + E A
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVA-KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 361
Query: 203 LFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYG 262
LF+EM R ++ D +++T++ + A E +MP P+ V+YS +ID +
Sbjct: 362 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 421
Query: 263 RAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLV 322
+AG D A +L+ R +D +++T++ I+ G + L++ EM ++GIK ++V
Sbjct: 422 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 481
Query: 323 IYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEM 382
YN+LL G+ + ++K ++ EM + P+ TY++L+ Y + ++A+ +++E
Sbjct: 482 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 541
Query: 383 KEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI------ 442
K GL+ +V+LY+ L+ G V AV + +M G SP+ T++S+I
Sbjct: 542 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSAT 601
Query: 443 ------YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLI---------QCYGKAKHVDDV 502
YS G + + L+ + E + I + L C + + +
Sbjct: 602 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 661
Query: 503 VRTFNRLLELGLTPDDRFCGCLLNVITQTPK-EELSKLIDCVERANPKL-GFVVELLLGE 562
+ F ++ +L + P+ +LN ++ E+ S L++ + + K+ G V LL+G+
Sbjct: 662 LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQ 721
Query: 563 QEKEGDFRTEASELFSVVS---ADVRKAYCNCLIDLCVNLDLLDKACELLEL-GLTLQIY 622
+E + +A LF V+ A+ N L D+ + + EL+ L G + Q++
Sbjct: 722 RE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVW 781
Query: 623 KDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK-- 682
+++ S S L L +S GAA +H W+ ++ ++ G ELP +L I TG GKH
Sbjct: 782 ENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKV 841
Query: 683 YSDKGMASVFESHLKELKAPFHEAPDKVGWFLTTKVAAKSWLESRASPELV 703
D + E L+ + APFH + +G F ++ +WL A+ +L+
Sbjct: 842 VGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882
BLAST of Clc01G11200 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 166.0 bits (419), Expect = 1.1e-40
Identity = 100/350 (28.57%), Postives = 177/350 (50.57%), Query Frame = 0
Query: 164 IALRYFQDVLKSSK-QTIFYNVTLKVFRKCRDMEG----AEKLFEEMLERGVKPDNVTFS 223
+ALR F +K Q++ N + + EG A +F + E G D +++
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 224 TIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNV-DMAFSLYDRART 283
++IS +AV F+KM C P +TY+ +++ +G+ G + SL ++ ++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 284 ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQ 343
+ D T++T+I + V+EEMKA G + V YN+LLD G++ RP +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 344 IKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLA 403
+ EM+ NGFSPS TY SL+ AY R ++A+ + +M EKG + +V Y TLL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 404 MCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFD 463
G V A+ +F++M+++G C P+ TF++ I +Y GK +E ++ +E+ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 452
Query: 464 PNIFVLTSLIQCYGKAKHVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ 508
P+I +L+ +G+ +V F + G P+ L++ ++
Sbjct: 453 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
BLAST of Clc01G11200 vs. TAIR 10
Match:
AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 159.1 bits (401), Expect = 1.3e-38
Identity = 134/567 (23.63%), Postives = 244/567 (43.03%), Query Frame = 0
Query: 135 DVLKVIGSNILEQDAVVVLNNMSNSQTALIALRYFQDVLKSSKQTIFYNVTLKVFRKCRD 194
+ L+ +G I A VL M++ AL + + Y + + +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 195 MEGAEKLFEEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSA 254
KL +EM+ G +P+ VT++ +I + N+A+ F +M C PD VTY
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 255 MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIG 314
+ID + +AG +D+A +Y R + D T+S +I G AG+ ++ EM G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 315 IKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDAL 374
PNLV YN ++D +A+ +Y++M GF P TY+ ++ G Y E+A
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 375 LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI 434
V+ EM++K + +Y L+ + G V +A + +Q M +G P+ T +S+++
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLST 619
Query: 435 YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCY--GKAKHVDDVVRTFNRLLELGLT 494
+ K++EA E+L M+ G P++ T L+ C G++K L++G
Sbjct: 620 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK------------LDMG-- 679
Query: 495 PDDRFCGCLLNVITQTPKEELSKLIDCVERANPKLGFVVELLLGEQEKEGDFRTEASELF 554
FCG L+ +P F++++ + E + R A+
Sbjct: 680 ----FCGQLM-----------------ASTGHPAHMFLLKMPAAGPDGE-NVRNHANNFL 739
Query: 555 SVVSADVR---KAYCNCLIDLCVNLDLLDKACELLELGLTLQIYKD-LQSRSPTQWSLYL 614
++ ++ R + + ++D ++A + E+ ++ D L+ +S + W + L
Sbjct: 740 DLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINL 799
Query: 615 KGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGMASVFESHLK 674
+S G A+TAL + K + + P + I TG G+ + E L
Sbjct: 800 HVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLN 849
Query: 675 ELKAPFHEAPDKVGWFLTTKVAAKSWL 694
+PF G F+ + WL
Sbjct: 860 IFGSPFFTESGNSGCFVGSGEPLNRWL 849
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038877791.1 | 0.0e+00 | 96.31 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ... | [more] |
| XP_008464281.1 | 0.0e+00 | 94.32 | PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... | [more] |
| XP_004139516.1 | 0.0e+00 | 92.90 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa... | [more] |
| XP_022142513.1 | 0.0e+00 | 90.63 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ... | [more] |
| KAG6583722.1 | 0.0e+00 | 89.93 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8GWE0 | 1.4e-271 | 65.95 | Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... | [more] |
| Q10PZ4 | 1.6e-206 | 54.60 | Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... | [more] |
| B4F8Z1 | 2.7e-206 | 53.46 | Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... | [more] |
| Q9LS25 | 2.2e-131 | 37.62 | Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... | [more] |
| Q9SIC9 | 5.2e-48 | 25.21 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TLM5 | 0.0e+00 | 94.32 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CL39 | 0.0e+00 | 94.32 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ... | [more] |
| A0A0A0LVP1 | 0.0e+00 | 92.90 | Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV... | [more] |
| A0A6J1CNE5 | 0.0e+00 | 90.63 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic... | [more] |
| A0A6J1EHV4 | 0.0e+00 | 89.79 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit... | [more] |
