Clc01G10560 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G10560
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ER membrane protein complex subunit 3
Location	ClcChr01: 14450031 .. 14456078 (-)
RNA-Seq Expression	Clc01G10560
Synteny	Clc01G10560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAATCTATATAAAAAAAATGTCATTTATTTAGTCCAACATGAATAGAAATACTATTAACATTATTTAGAAATTCTACTAAACTTAGAAGGAATATGTACTCTTCGTATATCCGTAAAATTGAAATATAGATATGGCCTTAATATTTAAATCTTGGTAATACCCTTTGCGTTCGGCAAGAGTTTCAACTCTCCTCACCCGCAACGGACTGAGCATTAAACATCCGATCCCTCTCGGCCTTCGTAGTTCAACTTTGTGGAGCTCGCCTATCGGATCCAGTCATGGCGGAAGATCTAGTTCTGGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTGGTCATGGTCCTCATCGGAGTTCTCCGCTACTTCGTCTCGAAGCTTATGCGCTCGTCTCCAGTCCCCGATGCCAAAGTTGTACGAGAAGGGTAAATTTCGATTCCTAATATTCAGCATTCGTACACCCTTCATCTTGTTAGTTCCTCACGCAGTTTTTAATTCTGGGTTTCAGGCAAATCGTACTTAGGGCTCGGAATTTACGTTCTGCTGCTAATTTTATTCCTCACAAGTCGTTTCGTTCCCGCAGAGTTTATTACGGCAACGAGGTTCTTTCCCCCTTTTTCCAATGTAGTATGCGATGTATTTATGAAAAAGAATTGTAGTATGCGATGTGTGTCTGTTATATCATGTCAAATTTGCTTCATTAAACATTTTTAGAGGAATCATTTCAGATATATCTGTTGTACTTCATGAATGGCGTAAGGTGTAGAAGGTTTAGTTTCTGTGTCGGGATTCAGCTTGAGTTATCAAATGCAGTCAGAACTCTCATGGGAGCTCTTTATTATTTCTGTTTGTTAAAATCAGTTTAGTCTAGTTGTTAATCTGTTAGTCTTAATGGGACACAAGTACCTAAAGTTATTAGAGAAGAGTTTTGGGTTCATCATGTAGAGTATTTATGCACTGTCCTTAAGGTTTTATAGGTTGTAACTTGTATGATTTATTTCATCCTTGATTATGGTGGGATGTGGATGTCGTGTATTGTGCAGCCGATTTTTAGGAATCTATGTCTGAGAATGGTTGCAGTAAGACTGTATATCTTGTATTGTAGTATGATTTTGATGTAACTATGAGTCCATGACGTTCTAAGTAGCACAGGAGGATGAAGAGACAATCTGATAACCTAGATATTTATATTCCACATATGCAATTGGCAGGAGAATGGGCTGCTCTATGTTCCCAAAGGCCAGGCACAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGGTGACTATAGTTGCATGTTCGATGTCTATTTTTCTTTTCATTGATATCACATTGAGTTCAATTATTTACATTTTTATTAATCCTTTTGTTCTTTACTAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCTGGATTTGTGGCAGGTGTGTTCTTCTTACTATTAATACTTTTGAATGCCCAAGGATAACCTTTTTGGTTGGGTGAATCTCCAAGTTATCTAGATTTATAATTTCTATACTTTTGGGGTGTTAAATGGTATGACTATGTGCTTGCAGCCTAACACTCATTATGATTTTTTAATACATGGGAACTTTGTACAATTATTTACTATGACTTTGCTGTTTCTCTGCCATTTTCTCTCTCCTTTTCTGATAATCCTGTTGGTTATAACTGGTAGAAAACATTAACCTCAGGTTTATTATCCTTGTGCAGTTAAAGTTGTTTTTTTACCTGTTTAAGTATCACTTTTCTTTTCAGCCTCCATTTTGTTCGCATCTAATGGTGTCTTCTCTCCTTATCATAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGATTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTATTTTCCAAGATCATTATTTAAATATTCTGGGGCATGTGTTAATGTCCTCTTAAATTTATTTATTTATTATTATTTCTTTTTTGGGGAAGGGGTGGCGGGGGGGCCAGGGGTAAAGTTTTTCCCTAAGCATTTGGTTGGATGATTATCACTAATAGTTTTAGATTCCTTATATCAGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGAGAAGAAAATGGTTGGTGCTTCTGTATAACGATTGCATTTATTTTACAACTGTTTATGTATATATGGAATCTTTTCACAGTAAGTAGCATTTTGAAAGCTCTTATACTGTGACTTATGAGAAAACAATTCTTGGTGCAGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCGACAAAGGTAAATATTGTTAGTCTTTACTACCTGGTATTTCAAACTTCTTTCTTAATTTGCAGGCTGTCGAATATGAATGTCTAAAGTTTTATATTCATTATTTTTCTCCATCTCTCTTCAAATGTAAATCAGTAGTATGCAAATCAGTTTTCATTGTTGAACAGTTTTGATCTTCTCCATATACATATATATATGGATTGGATTTGACACATCATTTTTTATTTAATATCTTTTAAGAAACATGGCTGGCTGCATTGCATTTGGTTCCTTATTCTTTTAAGTAAACTAAGCTTGTGAAGGAAGTCACACATATTTGAGTGGTTAAGTTTCAAATTTTGGCTCATAGTACCTATTGTAAAAGGATACACTTTGTTGAGTCTGTATATCAGTTTTGATGGTTGTCTGCTATATCATTTAAAATGAGTATTGACTGTTTGTTTACGTATGATGCCTTCCACTGGTTGTGCAGTTTATGTTCCTGATTGTCTACATTGATTGTGTGAGGATCCCTTTTGGTTGAACTTGCAAGTTCAGTGCAATAAGTGAACTGAGGTTGAATAACACTTTTTGAGTGTGCTCAATCTTGCACTAGCTCACTAGGAGTAGATTGTTGTCATACATGAGGTTCCCTGGTGTTGTTTATAGGTCTCACTCCTTGGGATGTGCATGAGCTTCAGTTTGAAGATCAGAAATGAAGCTTTTAGTTATTTCACTGATAACAATTTTTTCTACCTATGGTTGTGAACAACAACCCCAGAAGCTCTTTGTGAGAGTACTAATAGGGGTGTTTTGGGAGTAGTAGTAGAGTACGGGTATATTAGTACATAGTAATTACTATTAGATAGACGTAGTTTGGTTATAAATAGAACGAGTGAGTATTTGGCTATTTGTAGGGGAGGTCATAATTTGGTAAGTCAGACCTTAGTGGATTGGTTGTGGTAGAGACAGCCCTCTCAAAAGGCTATTAAAATTGTAATTTCTTATTGATATTGCAATATCGGTATCTTTGGTGTTTACTTATGCGTTTTGGTACGCTAACACTTTTTTTGTCTTGGCATCATATTACTCATGCAGCCTGTAGCATTCTTATCTTCAAATTGTTAATAAGGAGTACAAATCTTGGTTGTATAGACAACAGGGCCCTTGCCTTTAAAATTTCATTATGAAATCTTGAACTCCTTGTGACATGAATCTCTTGGCAAGAAGTTGTCCTATCAGCTTTTAAAAACATTTCCTGCTGCCCTCCTGTTGACCCTCGTGGTGGTTGGTTTTGTGGCAATCATCAATCAAACGTTTCCTAGTTTGACGTGGATTTGATCTGTTTGGAAAAGTAGTATGTTCTGAAGAAGCCTGACTATCTTACATTGAGGGTTAGAATACTACGAAAAAATATACTGGAATATGAGATCACCAATTTCTTTTTTGGTCAATTGTTTTCTAGTTTGATGTGAACTTAATCTTTTAGGCAAAGTAGTATGTTTTGGCAAAGCCTGGTTTTCTTCAAGTTAAAATTTTGAATATTTTCAAATTTCAGCAGTGGCGCCATTACTAGACTACAATTAGAATGCTAGAACGTGGGACCACCAATTGTATATTCTCAGTCATATGCTTATTAGCAATTTCAGGTAGGTAGAGTATTTCTTTATGGAGCAATCTGGCAAAGAAAGAATGGTAGGAGATATTAAGTGGAGGATCAAGATAAGTTTGGGGCAGGAAGGGGATGTAATAAGGTCAAAATGGTAAATTGCTCCTCTTGAAATGGGGGTAAATAAACTTTATAAAGAACAAAGCTGGAGATGTAGGTTGTCCTTGGCTTGCCTGCCTATTGGATCCTTTATTTGTGATTGACCCTACATCTGTCTGGCTGTAGGCAGGACAAGCTTTTAGTTACCCTGACTTAGTGACTTCCCTATTGCTCATTGACCTAGAATTGATATCAGTGGAAAGCACTGGAGTTGAAAACTTTGACAAAATGCTTCTTTTCCCTCTATATATTATTATTACTTGTTTGATGATTTATTTGCAAGCATCTTGCTGGTGCAGTGTTTTCAAAATGCATATTGTAGATCCCGTTAATTCTCCCTACTTTAACTTTTATATGTAAGGCTCGTTTGTCGATACATTACCTGCTGCTTGTAGGGGGTGTAAGCAGTTGGGTTTGAGTGTCGAACGGACTTCAGACTGCCAAAAATTAGAGGAAATATTGAAACTAGAGCCGAACAGCCTAGGCTGCAGTTACGAAGAGCTCAAACTGATTATCCGATGGTTTAATCGGCTCGGTCTTGCAGTTCACCATTTGGTCGGGCTGGTGGGCTGAAACGATGAAATTTAATGGGTATGGGCCTGTGTTGTTAAAATAAATTTGATGGTGTCATAAACAAGAGGAAATCCGCATGCCTCCTAGGGCTTGAACCCAAGTCAGTGAACATACCAAGCTGCGAATAATGCCAATGGACTGCATATACTGATTGATAAGCATTCAATTTTTATTATACCTATCCTTTTCAGTCGACTTGGGTTATAACTGGTACAACTTTGTCAAACCCGAATACAACCAAACTAGTTTTTATAATATGAAACCAAACAATCTGAACCTAAACCAACAGTGGTTTCATTCGGTTTAAGCGGGCTTTTCGGGTGTTTTGGTTTTTTTTTTTTTGAAATGGAAACAAGATTTTCAGGTGTTTTGATTTCTTGCACTCCTAGCTACCTCTGCTCATTTGAGCTAGTTTCATGTGAAACTTTGTTATACAACCTATCATCCTCGCATCCTTGGTGATAGCGAAGCTCCATCTGAAACCTCGTTATACTTCTTGTTACATCAACTGATCAGCTACCTCAACCAAATATGATTATATCATTGGGATGTGCGAATTGTCGACAATGTTCTAATTGATTTTTAACTTTAATCAATTCACTTTTGAGGTTTTATATGCATCTGCTAATTCTCTACGTTCCAGGAAACGCTTTATTTCTTGAAATCTACCTCTCTGATTTCCTTTGCCAACTTCTTTAATGGGTCAATCATTTGTACGGTTTTGGTTAGTGGTCATTTAGACCCTTTTTTCAAAGTAAACCCCTAGACCAACACAACCCAATGTTCTTTTTTTCCATCTATAGCAAATATCTTTGCTAAGAATTAATATAATTTGATTAGTTGTTAAGAAACATAATTGAACGATATCACCTTTATGAACACTTGAATTGATCATCATGCAAAATCTCTATTCACTACTGCTGAGGACTGATCTTAATGATATTGCATTTTTCTTCCCAGGGATTGAGTGCCGAGAAGGACAACTTAGATATAGTGCAACATGAATGGATCTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTGTTGAGAAAGATTGTCAGCTGATCGGTTTCTGGCTCACAGGTCCTCTATATTTCATATGGTTATTACGACTTAGGTACTTTTTTTTTTTGGGATTGTTGTGAAAAATAGAAATCTGTTTTTATCAATCATGGATGTTGTAACATTAAATTATTTTTAGTCAACTAATAGCAATTTGGATCTTTCCAAGTCATGTACAATCAATTCTTATAAAAGGATACCCTTGAAAATGGGATACAATGATGATGTTGAACATCTCTTGGAAGGCATGCAAGTCTCTCTCTCTCTCACACACACA

mRNA sequence

AAAAAAAAATCTATATAAAAAAAATGTCATTTATTTAGTCCAACATGAATAGAAATACTATTAACATTATTTAGAAATTCTACTAAACTTAGAAGGAATATGTACTCTTCGTATATCCGTAAAATTGAAATATAGATATGGCCTTAATATTTAAATCTTGGTAATACCCTTTGCGTTCGGCAAGAGTTTCAACTCTCCTCACCCGCAACGGACTGAGCATTAAACATCCGATCCCTCTCGGCCTTCGTAGTTCAACTTTGTGGAGCTCGCCTATCGGATCCAGTCATGGCGGAAGATCTAGTTCTGGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTGGTCATGGTCCTCATCGGAGTTCTCCGCTACTTCGTCTCGAAGCTTATGCGCTCGTCTCCAGTCCCCGATGCCAAAGTTGTACGAGAAGGGCAAATCGTACTTAGGGCTCGGAATTTACGTTCTGCTGCTAATTTTATTCCTCACAAGTCGTTTCGTTCCCGCAGAGTTTATTACGGCAACGAGCATGTCAAATTTGCTTCATTAAACATTTTTAGAGGAATCATTTCAGATATATCTGTTGTACTTCATGAATGGCGTAAGGTTGTAACTTGTATGATTTATTTCATCCTTGATTATGGTGGGATGTGGATGTCGTGTATTGTGCAGCCGATTTTTAGGAATCTATGTCTGAGAATGGTTGCAGAGAATGGGCTGCTCTATGTTCCCAAAGGCCAGGCACAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCTGGATTTGTGGCAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGATTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGCTCTTATACTGTGACTTATGAGAAAACAATTCTTGGTGCAGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCGACAAAGGTAAATATTGTTAGTCTTTACTACCTGTTGGGTTTGAGTGTCGAACGGACTTCAGACTGCCAAAAATTAGAGGAAATATTGAAACTAGAGCCGAACAGCCTAGGCTGCAGTTACGAAGAGCTCAAACTGATTATCCGATGGTTTAATCGGCTCGGTCTTGCAGTTCACCATTTGGTCGGGCTGGGATTGAGTGCCGAGAAGGACAACTTAGATATAGTGCAACATGAATGGATCTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTGTTGAGAAAGATTGTCAGCTGATCGGTTTCTGGCTCACAGGTCCTCTATATTTCATATGGTTATTACGACTTAGGTACTTTTTTTTTTTGGGATTGTTGTGAAAAATAGAAATCTGTTTTTATCAATCATGGATGTTGTAACATTAAATTATTTTTAGTCAACTAATAGCAATTTGGATCTTTCCAAGTCATGTACAATCAATTCTTATAAAAGGATACCCTTGAAAATGGGATACAATGATGATGTTGAACATCTCTTGGAAGGCATGCAAGTCTCTCTCTCTCTCACACACACA

Coding sequence (CDS)

ATGGCGGAAGATCTAGTTCTGGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTGGTCATGGTCCTCATCGGAGTTCTCCGCTACTTCGTCTCGAAGCTTATGCGCTCGTCTCCAGTCCCCGATGCCAAAGTTGTACGAGAAGGGCAAATCGTACTTAGGGCTCGGAATTTACGTTCTGCTGCTAATTTTATTCCTCACAAGTCGTTTCGTTCCCGCAGAGTTTATTACGGCAACGAGCATGTCAAATTTGCTTCATTAAACATTTTTAGAGGAATCATTTCAGATATATCTGTTGTACTTCATGAATGGCGTAAGGTTGTAACTTGTATGATTTATTTCATCCTTGATTATGGTGGGATGTGGATGTCGTGTATTGTGCAGCCGATTTTTAGGAATCTATGTCTGAGAATGGTTGCAGAGAATGGGCTGCTCTATGTTCCCAAAGGCCAGGCACAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCTGGATTTGTGGCAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGATTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGCTCTTATACTGTGACTTATGAGAAAACAATTCTTGGTGCAGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCGACAAAGGTAAATATTGTTAGTCTTTACTACCTGTTGGGTTTGAGTGTCGAACGGACTTCAGACTGCCAAAAATTAGAGGAAATATTGAAACTAGAGCCGAACAGCCTAGGCTGCAGTTACGAAGAGCTCAAACTGATTATCCGATGGTTTAATCGGCTCGGTCTTGCAGTTCACCATTTGGTCGGGCTGGGATTGAGTGCCGAGAAGGACAACTTAGATATAGTGCAACATGAATGGATCTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTGTTGAGAAAGATTGTCAGCTGA

Protein sequence

MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDYGGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYEKTILGAAMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILKLEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEAVLRKIVS

Homology

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BLAST of Clc01G10560 vs. NCBI nr
Match: XP_008458952.1 (PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 2.9e-100
Identity = 227/367 (61.85%), Postives = 230/367 (62.67%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIPHKSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. NCBI nr
Match: XP_004139548.1 (ER membrane protein complex subunit 3 [Cucumis sativus] >KAE8652874.1 hypothetical protein Csa_013036 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 3.8e-100
Identity = 226/367 (61.58%), Postives = 230/367 (62.67%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIPHKSFRSRR+YYGNE                                      
Sbjct: 61  RSAANFIPHKSFRSRRIYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. NCBI nr
Match: XP_038894845.1 (ER membrane protein complex subunit 3 [Benincasa hispida] >XP_038894846.1 ER membrane protein complex subunit 3 [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 8.4e-100
Identity = 226/367 (61.58%), Postives = 229/367 (62.40%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPD KVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDVKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIPHKSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. NCBI nr
Match: XP_023001598.1 (ER membrane protein complex subunit 3 [Cucurbita maxima] >XP_023519748.1 ER membrane protein complex subunit 3 [Cucurbita pepo subsp. pepo] >KAG6583752.1 ER membrane protein complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019391.1 ER membrane protein complex subunit 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371.7 bits (953), Expect = 7.1e-99
Identity = 225/367 (61.31%), Postives = 229/367 (62.40%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIP KSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. NCBI nr
Match: XP_022927570.1 (ER membrane protein complex subunit 3 [Cucurbita moschata])

HSP 1 Score: 371.3 bits (952), Expect = 9.3e-99
Identity = 224/367 (61.04%), Postives = 229/367 (62.40%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIP KSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. ExPASy Swiss-Prot
Match: Q7SXW4 (ER membrane protein complex subunit 3 OS=Danio rerio OX=7955 GN=emc3 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-23
Identity = 83/270 (30.74%), Postives = 128/270 (47.41%), Query Frame = 0


Query: 1   MAE-DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARN 60
           MAE +L+LD+ IR WV++P+  +  L+GV+R++VS L++S      + V + Q+++R+R 
Sbjct: 1   MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRV 60

Query: 61  LRSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILD 120
           LR    +IP +SF  R+ Y+ N+                                     
Sbjct: 61  LRENGKYIPKQSFLMRKFYFNNQ------------------------------------- 120

Query: 121 YGGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 180
                                  E+G  +  K + +       +DP+M  DMMK N++ +
Sbjct: 121 -----------------------EDG--FFKKTKRKVVPPSPMTDPSMLTDMMKGNVTNV 180

Query: 181 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTY- 240
           +P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS S  +   + 
Sbjct: 181 LPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFG 208

Query: 241 ----EKTILGAAMD-DTQRMM--QMSGFGM 262
                  ILG     D  R+M  QMSG  M
Sbjct: 241 LRSMYSLILGQDNGADQSRIMQEQMSGAAM 208

[Close]

BLAST of Clc01G10560 vs. ExPASy Swiss-Prot
Match: Q9P0I2 (ER membrane protein complex subunit 3 OS=Homo sapiens OX=9606 GN=EMC3 PE=1 SV=3)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 78/266 (29.32%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDYGGM 123
             +IP +SF +R+ Y+ N                                          
Sbjct: 65  GKYIPKQSFLTRKYYFNN------------------------------------------ 124

Query: 124 WMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 183
                              E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 125 ------------------PEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 184

Query: 184 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTY----- 243
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS S  +   +     
Sbjct: 185 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 208

Query: 244 EKTILGA--AMDDTQRMM-QMSGFGM 262
              ILG   A D ++ M  QM+G  M
Sbjct: 245 YSLILGQDNAADQSRMMQEQMTGAAM 208

[Close]

BLAST of Clc01G10560 vs. ExPASy Swiss-Prot
Match: Q99KI3 (ER membrane protein complex subunit 3 OS=Mus musculus OX=10090 GN=Emc3 PE=1 SV=3)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 78/266 (29.32%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDYGGM 123
             +IP +SF +R+ Y+ N                                          
Sbjct: 65  GKYIPKQSFLTRKYYFNN------------------------------------------ 124

Query: 124 WMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 183
                              E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 125 ------------------PEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 184

Query: 184 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTY----- 243
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS S  +   +     
Sbjct: 185 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 208

Query: 244 EKTILGA--AMDDTQRMM-QMSGFGM 262
              ILG   A D ++ M  QM+G  M
Sbjct: 245 YSLILGQDNAADQSRMMQEQMTGAAM 208

[Close]

BLAST of Clc01G10560 vs. ExPASy Swiss-Prot
Match: Q5R7C1 (ER membrane protein complex subunit 3 OS=Pongo abelii OX=9601 GN=EMC3 PE=2 SV=3)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 78/266 (29.32%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDYGGM 123
             +IP +SF +R+ Y+ N                                          
Sbjct: 65  GKYIPKQSFLTRKYYFNN------------------------------------------ 124

Query: 124 WMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 183
                              E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 125 ------------------PEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 184

Query: 184 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTY----- 243
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS S  +   +     
Sbjct: 185 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 208

Query: 244 EKTILGA--AMDDTQRMM-QMSGFGM 262
              ILG   A D ++ M  QM+G  M
Sbjct: 245 YSLILGQDNAADQSRMMQEQMTGAAM 208

[Close]

BLAST of Clc01G10560 vs. ExPASy Swiss-Prot
Match: Q5U2V8 (ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 78/266 (29.32%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDYGGM 123
             +IP +SF +R+ Y+ N                                          
Sbjct: 65  GKYIPKQSFLTRKYYFNN------------------------------------------ 124

Query: 124 WMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 183
                              E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 125 ------------------PEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 184

Query: 184 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTY----- 243
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS S  +   +     
Sbjct: 185 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 208

Query: 244 EKTILGA--AMDDTQRMM-QMSGFGM 262
              ILG   A D ++ M  QM+G  M
Sbjct: 245 YSLILGQDNAADQSRMMQEQMTGAAM 208

[Close]

BLAST of Clc01G10560 vs. ExPASy TrEMBL
Match: A0A1S3C924 (ER membrane protein complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103498211 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.4e-100
Identity = 227/367 (61.85%), Postives = 230/367 (62.67%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIPHKSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. ExPASy TrEMBL
Match: A0A6J1KQZ7 (ER membrane protein complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111495678 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.5e-99
Identity = 225/367 (61.31%), Postives = 229/367 (62.40%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIP KSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. ExPASy TrEMBL
Match: A0A6J1EPC4 (ER membrane protein complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111434362 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 4.5e-99
Identity = 224/367 (61.04%), Postives = 229/367 (62.40%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           RSAANFIP KSFRSRRVYYGNE                                      
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. ExPASy TrEMBL
Match: A0A6J1CLR8 (ER membrane protein complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111012619 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 5.0e-98
Identity = 223/367 (60.76%), Postives = 227/367 (61.85%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           R+ ANFIP KSFRSRRVYYGNE                                      
Sbjct: 61  RAGANFIPLKSFRSRRVYYGNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILGA--AMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   AMDDTQRMMQMSGFGMDPTK                            
Sbjct: 241 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTK---------------------------- 246

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                            GLSAEKDNLDIVQHEW+LPKFEHRAEA
Sbjct: 301 ---------------------------------GLSAEKDNLDIVQHEWVLPKFEHRAEA 246

[Close]

BLAST of Clc01G10560 vs. ExPASy TrEMBL
Match: A0A5N5MBS4 (ER membrane protein complex subunit 3 OS=Salix brachista OX=2182728 GN=DKX38_008837 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 2.2e-93
Identity = 217/393 (55.22%), Postives = 239/393 (60.81%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPL+VVM+LIGVLRYFVSKLMRS   PDAKVVREGQ+V+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLTVVMILIGVLRYFVSKLMRSQQNPDAKVVREGQVVIRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           R+ ANFIP KSFR+RR Y+ NE                                      
Sbjct: 61  RAGANFIPAKSFRARRAYFSNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLL+VPKGQ QN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLHVPKGQGQNPQAQMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTY-- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 --------------EKTILGAAMDDTQRMMQMSGFGMDPTKVNI----------VSLYYL 300
                         +  I  AAMDDTQRMMQMSGFGMDPTKV +          +S++YL
Sbjct: 241 RGLFSLILGEENELKYDISNAAMDDTQRMMQMSGFGMDPTKVGLGERVVNKIMSLSIHYL 300

Query: 301 LGLSVERTSDCQKLEEILKLEPN------SLGCSYEELKLIIRWFNRLGLAVHH-LVGLG 360
             LS         L +   L         SLG S   L       +R  L   +   G  
Sbjct: 301 ASLSFGCCHHFAALGQSFALHVAAVMLLLSLGRSIGLLFFTTLDMSRALLGTRNGKSGKN 333

[Close]

BLAST of Clc01G10560 vs. TAIR 10
Match: AT4G12590.1 (Protein of unknown function DUF106, transmembrane )

HSP 1 Score: 320.5 bits (820), Expect = 1.8e-87
Identity = 194/366 (53.01%), Postives = 213/366 (58.20%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS+P PDAK+V+EGQ+V+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query: 61  RSAANFIPHKSFRSRRVYYGNEHVKFASLNIFRGIISDISVVLHEWRKVVTCMIYFILDY 120
           +  ANFIP KSFR+RR Y+ NE                                      
Sbjct: 61  KVGANFIPPKSFRARRFYFSNE-------------------------------------- 120

Query: 121 GGMWMSCIVQPIFRNLCLRMVAENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 180
                                 ENGLL+VPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct: 121 ----------------------ENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 180

Query: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSCSYTVTYE- 240
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRS  +   +  
Sbjct: 181 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 240

Query: 241 ----KTILG--AAMDDTQRMMQMSGFGMDPTKVNIVSLYYLLGLSVERTSDCQKLEEILK 300
                 ILG   A+DDTQRMMQM GFG D +K                            
Sbjct: 241 RGLFSLILGDENAIDDTQRMMQMGGFGFDASK---------------------------- 245

Query: 301 LEPNSLGCSYEELKLIIRWFNRLGLAVHHLVGLGLSAEKDNLDIVQHEWILPKFEHRAEA 360
                                             L AEKD LDI+QHEW LP+FE RAE+
Sbjct: 301 ---------------------------------SLGAEKDGLDIIQHEWALPRFEQRAES 245

The following BLAST results are available for this feature:

BLAST of Clc01G10560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458952.1	2.9e-100	61.85	PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo]	[more]
XP_004139548.1	3.8e-100	61.58	ER membrane protein complex subunit 3 [Cucumis sativus] >KAE8652874.1 hypothetic...	[more]
XP_038894845.1	8.4e-100	61.58	ER membrane protein complex subunit 3 [Benincasa hispida] >XP_038894846.1 ER mem...	[more]
XP_023001598.1	7.1e-99	61.31	ER membrane protein complex subunit 3 [Cucurbita maxima] >XP_023519748.1 ER memb...	[more]
XP_022927570.1	9.3e-99	61.04	ER membrane protein complex subunit 3 [Cucurbita moschata]	[more]

BLAST of Clc01G10560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7SXW4	3.9e-23	30.74	ER membrane protein complex subunit 3 OS=Danio rerio OX=7955 GN=emc3 PE=2 SV=1	[more]
Q9P0I2	1.1e-22	29.32	ER membrane protein complex subunit 3 OS=Homo sapiens OX=9606 GN=EMC3 PE=1 SV=3	[more]
Q99KI3	1.1e-22	29.32	ER membrane protein complex subunit 3 OS=Mus musculus OX=10090 GN=Emc3 PE=1 SV=3	[more]
Q5R7C1	1.1e-22	29.32	ER membrane protein complex subunit 3 OS=Pongo abelii OX=9601 GN=EMC3 PE=2 SV=3	[more]
Q5U2V8	1.1e-22	29.32	ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2...	[more]

BLAST of Clc01G10560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C924	1.4e-100	61.85	ER membrane protein complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103498211 PE...	[more]
A0A6J1KQZ7	3.5e-99	61.31	ER membrane protein complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC11149567...	[more]
A0A6J1EPC4	4.5e-99	61.04	ER membrane protein complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111434...	[more]
A0A6J1CLR8	5.0e-98	60.76	ER membrane protein complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5N5MBS4	2.2e-93	55.22	ER membrane protein complex subunit 3 OS=Salix brachista OX=2182728 GN=DKX38_008...	[more]

BLAST of Clc01G10560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12590.1	1.8e-87	53.01	Protein of unknown function DUF106, transmembrane	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002809	Integral membrane protein EMC3/TMCO1-like	SMART	SM01415	DUF106_2	coord: 4..247 e-value: 1.3E-50 score: 184.1
IPR002809	Integral membrane protein EMC3/TMCO1-like	PFAM	PF01956	EMC3_TMCO1	coord: 4..231 e-value: 5.0E-39 score: 133.7
IPR008568	ER membrane protein complex subunit 3	PANTHER	PTHR13116	UNCHARACTERIZED	coord: 1..84
IPR008568	ER membrane protein complex subunit 3	PANTHER	PTHR13116	UNCHARACTERIZED	coord: 327..359
IPR008568	ER membrane protein complex subunit 3	PANTHER	PTHR13116	UNCHARACTERIZED	coord: 142..265
None	No IPR available	PANTHER	PTHR13116:SF8	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 3	coord: 142..265
None	No IPR available	PANTHER	PTHR13116:SF8	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 3	coord: 1..84 coord: 327..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G10560.2	Clc01G10560.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane