Clc01G10470 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G10470
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionGolgin subfamily A member 6-like protein 22 isoform X2
LocationClcChr01: 13910094 .. 13920305 (+)
RNA-Seq ExpressionClc01G10470
SyntenyClc01G10470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGATTTGACGGAATGAGAAGGAAGGTCATGGATGGAAACACGGGTTCAGAAAAAACCCATCTGTCTGTTAATAAGACGAAGCCAAAAGGCATTTTAGAGGGAAGGAGATAAGAATTTCCCATTTTTTAATTTTTCCCCCGAAACGGATCAGACGCTCCACCGTGACGCCAGCGCCACCGATCCGACTGATTGATTCATGGAGGGCGTTGGTGCCCGACTCGGCCGGTCTTCAACTCGCTACGGACCCGCCACCGTCTTCACTGGTCCGGTCAGGAAGTGGAAGAAGAAATGGATCCACGTTGCGCCGTCCACCCCCGCTTCCAACAACCATTCCCATTCTCAGCGGCACACTAACCCCAACAATGTTACCACCAATGCCACTGCCAACGCTACTACCAACGCTTCGCATCTTTTGCTTTACAAGTGGACGCCTATTACACAGAGTCTCAACAATGGCAACGCCGATGAAAAGAACGCCGGCAAAGAGGAGAGCCCGACGGTCACAGAGGAGCCTCCTCGCCGGAAATTTAAATACATACCGGTACCCGCCTTTTTCTTCTGTTTGAATTATCTGGGTTTGTTGAATGTTGAAGTTTTCAATGCATTCCGCTTGCTTTTGTGGTCGAATTTACTGGGCTTTTGGTTTTCTATATTTACGTGAGTGTCTGAGTATACTTGTAGGCAATTGGCAAATGTGTAGGTATGAATGTGGAACTTTGTCATTTCGTGAGAATCTGGAAGCTAAACCTTAGCCACGTAGTAAGGTGCATATGTCCTATTTAGGCTTCCAGTTGGGGAATAACCCTAGGGCTTGCTTATGTTTCGATCCTGTGCTTATGAAATTTCTAAAGTGTCCTTCATCGTGGAATAAAGTCTTTTTTTCAAAAGAAGTGTGGTGGATTAATGCCACCCGTTTATTTCCTCTATTAGGACAATGGACTTTTCCAAATTTGCACCATTTACGAAGGTTTGATTATGATATTGTCCATTCATGTCTAAGCTCCATGACGTAACTTTTAGTTTCACCTTACATATACATGTCATATTTTTTTAAACTGAAACAACTGCTTTCATTGGAAAAGAAAACAAGCACATCAAATTCTTAGGCTTTCTCTATTTGGACTATGTTTCCATCTTGAAAAGATGCTTGAGCCCTCCTTCCTCTGAAAAATCTTTACCACATCAAGAGTTTAATATTATCCAAGTTAGTTAATTTTTTTCAAAGCACACCGTTTGTTTGATAGGGCTCACCTACATATCAAGTTGTGAGATAGTCGACACCTATCACTCATTGTGGCATAGCACTCTTAATAATCCTCCAAACAAAATTCTGTTGGGTCTCCTTCCAATAGTCTTTGTTTTCGAGCCTGCTGTCTTTACTGTACTGTAGAGATCACATTGTTAAGATAACTAGGGTCCACTATTTTTTGTTAGGCACCTGAGAATTTATGTATAATTCCATATAATTATGTCCAAGCCTCAACACATTATTGTTTGACATGTGAGGATTTCATTGATATGACCAAGTTTGTGGCATAACTTTGATAACATTTGTTAGAATAGCGGTCCTTTATATCTCCGTAATCGTATCATATTATTGCTTTTGGGTTAGGCTCTCATGATTTTGCATTTGGTCCACGTTTTAGAGGCTATTAAGGTTTTTTCTTTTCATTTTTTTTTTCTCCTTCCTCTTCTTCTTCTTCTTCGTTTTTTTCTTTGTTAAGGAAAGGAAGGAGGTCTCAACTAGTAAGGTGGGATGGGGTAGTAGGATTAGGGTAAATTAGGGTATCTTGGTCAAATCCTTAATTCATTAGGTTTAGGATTAGTTTAGTTGATGATTGATTAGGATTATAATTAGTTTCCTTGATTTATTAGGATTATGATTAGTTTGCTTTCTAATTCTCTATGAATAGAAGGATTGTCTTATTTGTTATGTTAAGTTTTGATTCATAATAAAGAATTTTGATTTGGTTATTGGAGAAAGTTCTCTTTTCATCTCTTAGTCTACATTAATTTGGTATTAAAGCAGCCGCCTGGGCCAACGTCGATTGCTGGCAATGGAAGACCGGGAAATTCTTGGCGATGCCGATCACAAGAGGGAGCTTTGTGAACTTTGTTCGTTGTCGAACAACGCACATCTAATTAGGGGAATCCTTTAAATTCTAGGAAAGAAAGAAAAAACCAAAGATTTTTTTTAGGATTTCGAAAGAATGGACTATTATCGATCAAGGAAAATGTAAAAAAAAAATGCAGTAATTGGTATAGGTAAGAAAGTCAAATTTACTCCAAAAAAACAATGTTGGAATTCTGACTCAAGTGATTTGGAGGAAGAATTTCAATGTTACATCACTCATGCTCGATTTTATCAAACAACCTATCAAGATTCACAGTTAAAATTCGATTATACTAATTCAAGCGACGCCAATGAAGATTTAAATACAGTTCGAAAATTCAAAACAAATTGTCACGACTCACTACAAGGAACAAACTCAAAGATCTAATCATGCCACTTTTTCAAGAAATCGATGTGAGAATTTGGACTTAGGTGATTCAGAAAGTGATTCAAAGTGAGAAATTTATTATGGCTAACATCAAAAAGCACCCAGACTACAATAATTATGGGCTGAAACTTATTCAAGAATACCTAATGTGTACATCAATCCTGAAGTATTGGAGGGAATGAAGAAGGGAGTAAAAGAGATCTAATGTTTGTTGGCCAAGGTGACTCAAAATATGGATCAACTTTCAGAACAATGGCAAGAGTTAAAAAAAAGAAATAATATAAGAAAATCAAAACTAAGAGCTTGTTGGATTAAATGAAAATCAAGAATTCAACCAAGGTCGTGAAATCTTGCAAGAAACACATAAGATAGAAAATTCAAAAGAAATTTGGAACCCACACATGGACCAACTGAGAAAAGAAGAAAAAATGAGCATAGAAAAATCTAAAGCAAAAGCTAAGGAAGTTGTGTTCAAGAAAGAAGACGTAATAATAGATGGAGGTAATTTTGGCAAAGAAGAGGACAACCATGGGCAACTTGAGTTGAAGAAGTGTGAATCTCTGGTTGTAGTTGATTGCTTGGAAGACAACGAGGAAAAATACGTGGAAACACATAATCCATTTGAATCGACCCAAGCGATCTGGCCCAACATGTTTGCTCAATTCCTAGCATGTGTTTCGCGCAATCCGACGCGGGTTCAGTCCTTCCTAGTTTCAATTTGCTGCCTCCTTTTTTGTGAGTTTATTTCAACCCATTTCTTCATAAATTCTAGGTTATGCAACAACAATTTTTTAGATGGGTTTATGGGTTGCTTTGATACTCCAATTTTGGCTAAAATGATTGGGCAAAATCTTGGTGGATGGCATGCATACAATTCTCAACAACCAAAGAAAAATTTTGACGAGGGTCATACTCTAACAGTTCTCAGATTTTGTATGGGCTCTTTTAATCATTGTTGTTGCAGTTGCACTGCAAAATTTCCATAACCCAACAATTTTATTTGGGATTTTTACAAATCGTTGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTTTCATTTTCCTTTTGAAACTCGAGGACCAGTTTTTTTGGGGAAGGATAGAATGGTGTAGTAGGATTAAGGTAAATTAGGGTATCTTGGTCAAATCCTTAATTTATTAGGTCTAAGATTAGTTCATTGATTGATTAAGATTAAGATTAGTTTCCTTGATTTATTAAAATTATGGTTAGTTTCTTTGATTAATTAGGATTAGGATTAGTTTGCTTTCCATTCTCTATAAATAGAGGGATTGTCTTCTTGTTTTGATAACTTTTGATTCATAATAAAGACTTTTGATTTGATTTTGGGAGAAAGTTCTCCTTTTATCTCTTAGGCTATATCATGAGAGATTAGGGTTGTTTCTAAGCTGGGGCAACGGTGTGTTAGGCCTTGGGAACTTGGTGAAGAGAATGTCAAATTCTTAGCTAGGTTTTGTGCTTACCTCCATAATTTGATACTTTGTGGCATAATATTATCATGAGTAGATTTATTTTGTCCTTTTATTTTTGGTAAGTAACATACAGTACGACATTTTCTTCCTCATTTTAACCATTTTGTCAAGTCTTCCATGAGCCTCACTTCCAATTTTGGAAAAACCATTGGAATTGATGTAGCCTTAAGGAGTAATTCTCCAAGAATCAAGCTTGTGAATCTTTTATTAGAATTATAATGTGTCATACAAGAGGGGAAAGACTCATATTTATAGAGTTTATTATAAGTGGGGGTAAAAGGGAAATTAACCTAGAATATTACCCAATTAACCCTATTCTTCCTTCATTTGTAATGAAACTGTCTATAACCTTTTTCCTTTCCTTTAAAGCCATTCATTGCAAAAAGATGCCTATGTTAATTCTGGCTAGTTGTGGAATGAAACCTTTCCTTGCTTTCTTTTATAACTTGCATTCGAAGGGACTTTTTGACATTGAGTTTGAGTTTGCAACCTTATGGTCTCTCCAAATTTTGTTGAATACTTGGACCTTGAAACCTTGAGGGAGTTCTTGAAAATCTTTTTATGCTTGTTTGATTGCTCAATTCTCCTTTTTGCCAAATTCTGGGAGACTAAAACATTCTTTCTATCTATTTTTATCTTGTAAAATGTATTACTCAAAAGCCAAGGACAACGTATGGGCCAAGGGAACTGAAGAACTAATTCTTTTTCAAAATGTTTAATTTTTTTTCTCGAAAGGAAACATAACTTTTTTTTGTTGATACAATGAAATGAGACTAATGCTCAAAATTGAAGAAAACTAACCGTTAAAATGTTTAATTAATAACAGTCTTGTATAATCTACTACCTCCATGATGTTGGAGGCACGAGATGATTTTCTTTTAGTGGGGAGCTAACTGACGGAAAAATCATGGACTCTTGTGTCAGATGTATTTCTTTCATATGTGGATGGAATTATTATCTTCCTCATAAGGGTTGTGGAGGTTGTCAGGAGCTGTTCACCTGTTACTTTGAATCGAAAAGTTTTCAGTAGGGTAACATGTCTGCCTAGCATTTGGTCCTTCATTGGTGGTTACTCTCACCTTATGCCTTACTGGTTACTCTCATTGTATGGACGTGCATTTATTTTGTTGATATCTTTTGGATTTAAAGTACAATTCATATAGGACATGGTTTTTTTTTCTTACCAATGAAGTAACATCTTCATTGCTCAAAGGGTCAAATGTGTGTACATCTCCTGTTTGTATGGGCTAAATGGGGCTTTTGTACACAAGTTCTCATTGGAATTATTCGCTAGGCCACATTATTCTTAACTGGAGCCCCTTTCTTTAAAGGGGTCTTTTGTGGGTTATTTTTCTTTTATTGTATGACCTTATATTCTTTCTTTCATTCTCAATAAAAGTAGTTGTCCCCAGATTAAGCTTTTGTAGTCTGAGAATTTCATTTGGCCACTCCTGCGTGGGCCAATACCTGTCTTTAACATCCATCAAGAAAATTGTTAGTGGAAGAATTGAAAACAGCGAAGGTGTATGGGCAGTTGGTCTTGTTCTTGTGCTGGATTAAGCTATATCTTTGAAATGTCCAATCAAGTTTGTATTGTTTCCTTCCTTCATGAATTAATTGTTTGTTAAATTTACATGAAATCTGAGGACATGTCATGCGTCATTTTCTAAGACACCATATATATTGTTTGTCAATTGTCAATAGACATCAAGGACCGCATTGCTATTTTCATTCCTTAATTTAGTCAACCTTGTAAGGTTATGAGTGTTTCTTTTCTTTTCTTTTCTTTTCATTTCTTTTAATTGTTTAAATATTTCATTGATAAGATGGTATATACAAGAGAGGGGGCGTCCAGGCCTTAAAATTTTGGTTTGGAGACCTTTCTTGTTTTGTTTGGTTTAGACCTTGCATGGCTTCTTTTCTGATTTTTGTAGGCCTTCTTTTTTTGGTGTTGGTCTGCATTTTTTTGGCCCTTTTGTTTTGTTTTGTTTTGTTTTTTTTTGGGCCCTTTTTCAATTTTTCATCTCATAAAAGGTCATTTGAGCTATGATTTGTGAAGAGAAATAAAAATATACACCAACCAAGAAAGCGTTCCAGCTCATTAAAAGGTTATTTGAGCTATGATTTGCAGAGGAAGAGAAATAAACATTTACACCAACCAAGAGCTAGAACAAAAACACTATCAGCAAAAATTTGCTATTGCAAGTCCTGTTGTTCCTTTCCATCCAAAGGCTCCGTGGAATGATCCTGACCATTTGCAAGACCTCTTTTTCTTCTTGTAAGGTTGTGAGCGGGCTTTGTTTTTCAATCCAATGCTTTTACTTGTGCTCGACAAGTGACAGTCTTCATGCTCTCATTTCCAGTAATTACCTTGATTTGAACATAGTATTTGTTGAACTTTGGTGGTTTTGATTTTGACTTAGATCAATGTCTTGAAAAACGTGCCTCCAGAAAAGCCTTTCAAAGTGCCTTGCTTAAATGAAGTTAGCCCCCCTTAGTGAGCACGTGCCTTGGAGCCTCACATTATTTTAATTAATTTTTTTCAATTAAGAACTTGAAAGTTATTCTCCTAAAACCCACATTTCTCTCCGGTCAAATTACAAGTAATCTATGAACTTTTAGGTTTGTGTCTATTTGTTCATTGAACTTTTTTTTCTTTTCTTTTATTTTATAAGAAACAATTTCGTAAAAGTGTTGAATAGGTTTTTAAGCTTCTTTTAATTTTTTGTTTATAGGTTTCTAAATTAATTTTTTGTCTAATAGGTCTTCAATCTATTCAAACTTTTTAAAATTCACAATCCTACTAGACACAAAATTAAAGTTTACGGTCCTATTAGACATTAAAATAGAATTTTATATTCAATAGATCAATTGACCTTAAAACTTTTGAATATATAAGGGATGTATAAGACACAAAATCGATTGTTTGGAAACCTATTAGATACAAGTTGAAACTTTAGGGATCTTTTAGACACAAAACTTGAAAATTCATGGACTAAACTCTAGGAAGCATAAACATAGATACAGATAAGATAGGACATGACAATGTGCTAAGAAAAGTAGGATATGGATATGTTCTGCATATACTATTTTTTATATTTGTTTTTAGGATATATGTAATTTCAACAAAAGGTTCTAATTTACTTGAACATATAATTTAAATTTAACTTTAGCTTGAAAATGAAAGAGGAAAAAGGAAAGAGATTTAAAAAGAGAAGATGAAATTATTAGGTTGCCCTAGTGGTAAATAAGGGGACATGAACTTGATAAGGGCTAAGAAGTCATAGGTTAAATCCATGGTGGCCTTCTACCTAGGATTTAATATTCTATGAATTTCCTTGACACTCAAATGTTGTAGGGTTAGGTGGGTTGTCCTATGAGGTTAGTCGAGGTGTACATAAGTTGGCTCGAATACTACAGATAAAAAAAGAAAAAGGTGAAACTAATAAGTTAATTAAAGGTGATTAAAAAGAAAAGAACAATGGCGCGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGTTGGCGGAATGCTAAAGGTAGTTGGTCGCAAATCACAGATGCAACTTCATGCATTCCATGTGGATAGGCATATGACTTTCAATTGGCCCACTATAGAGACCTGATTGAGATCATAGAGGAATTCCTTCTCCATTTTCCTTTAAGGGAGAAGGATCATTTCTTGTGGCTTGTTGGGGTGTGGGCGCTGTTGTGGAATCTTTGGGTTGAGAGTGACAATAATTTTAGAGGCTTGGAAAGGGAGCCGGATGATGTGTGGTCCCTTGCTAGATTTGATGTTTCTCTTTGGGCTTCAATTACAAAAGTTTAACTTTTGTAATTATTTGATAGGCGTTATTTTATAGGATTGGAAGTCTTTTCTTTAATGGTTTTCCTTTTTTTGTGTGCTGCTTTTCTTGGTTGTCTATGTATTCTTTCATTGAAGTTGTTTCTTATTAGAAAAAATTGAAGGTAGTTAGGTCGACATGTCTTTTTCTTTTCTTTTCTTATAAAAAAAATCAGTAGTCTATAGATGTGATAAAGTTAAGAGCAATGAACAAGATGATTTCCCCCTTCATGGCTACGAGCACCCATATCAAGCTTCTCTTGTAACTTTTTCTCCAAATAATTGGACACCCCATCAAGGACCTTAAAGAGGGAAAAGTAGGTTGGAGATTTGGACAAGATTGACTGGGCAAGGGTAAAGCAGTAGTCATCGTTGGTGAATGTAGAATCTTTCTAGCTGCCTGAAAAATGCAAAACTTTAGAAAGTACGTTGGCTGTTAATGGACTTTATATTGTTTTAATGAAAACTATTAACAAACTAATACTTTCTTGACACTTGCAACGATTGTAGCTTTGTAATGCTGTTATAAACTCTGCTTTTTCCCCCTTTTTTAAAAAGATAAGGTTATCTCTTTTTAATATCCTTTTTTATGCAATTGGCAATGCTAGGGCATATATATTACAGTGTTATTGATACCTCCACTATTCTAATCCCAAGAATGTTTCAATATCCTTTTTTAATATCCTTTACCCTTTCTTCTTTTCATAGTTATCATTGTGTGTGGGGACTATTTATCTGTTTCATATCTTCACATAGAAGTCTATTTTTTTTTTCTCCCAAGTGTAGAAGTTGAACTCTAAAGAAGATTCAGATTTTTCCTTGCCTTGTCCTTGGGAGGATCTATCATTTTGACTTTGTTCAAAGAGATTTGTTGACCCCGATAAGTGTATCTAGTGTAAATGTGTTGCTGAAGATTTGAATCACTCGCTACAATTTTCCCTTTGCTTTGCTCCATGGTGTGGGGTCATTTATGGCCAGATATATTTGTACTCTTTGGTCTGTATAGAGGATGAGCCTGCGATGTTTAAAGGAATGCTGTTTTGGTTTCAATGTTTTGGGATAAAGACTGCTTACTGTACCAAGTCATCTGTTGATGTTTTGTTGGTTTTCAAAGTTAGAAAGATGACTTTTCTTGAATTTAGTTAGGTCCTGGGAGGTGTGGAGTTCTGCACATTATAAAACCTCTCTTTTTAGGATACTTCACTTTTGTTTGTTTGTTTGCTTTTTATTTTTATTATTTTTATTTTATTTTATTTTTTTTGTTTTTGTAATTACACCCTAATATTGATCACCAACGGTAGGGTTCTCTTCAAGGTATTTTTGTTTTTTGGTGTGTGCAGCGTGGCCCTTGTGTAAATATCGGTACCATTTATCTTAGTGGAAGATGGTTCTCCACAGGGAAGAACTGTTATAAGAAGCTTCATAATTATAATTTTGGGGACACATATTTAGCTAATTACTATGTGTATCCCTGCCCCAATCTAAATTATAAATAAGTTGAATGTTTGGAGGTTGGAAAGTGCATTTATTTGTCTTCATGTGCAGATTGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGCAGTGCAGTAGCGACAAAGGGGGAGCTTCAAAATGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAGTCAGGTAAATTACGTTTATTCTTACCAAGGATTTCAATATGCTCGATGTAAACTGATGAATCAGTAACTTTTGACACTAAGCTTCATCTTTCTCTAATGTTGCACATGTATAATGGTCGGCCTTTTGATTTCATCAGTCTCAGGACAACGGTCATCCAGTGCGCCAAGATTTAAATGAAAGTACTTTGGATTTAAGTCTGAACCTGAATGCTCTCGACGATGGCGGCGAAGCTAGTTCAAAAGCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAACGTTAGAGTGTGTGGATTGCTTGGACCTGTCATTCTACATTTTAGAAGCAGCTGCAGTTTCGTCCTTACCAATTCAATTCTCTTATTGGAACTGAGTTACTTGACATCCCACATCTCTGCTAATCCTGGAAGTATATGGTTCTCTCTAGTTTGCTTATTTGAGCTAATTTTGATTTGTTCACAGAAAATATACAGTACCAATTCTTTTATCCTTAAAATTTGATAGCAATGTAAGAAACTGTAACGTGAGGCTAAGGAATTGTGTACGATTATCCACATGTTGAGATTTTAGCTTTGTTTGACTTCACTGTCAAAATGACTGTCTAATGGACTCACAATCTCTGCTATTTCAATCGATACATGACACTCTTTTTCTCCCA

mRNA sequence

CAGGATTTGACGGAATGAGAAGGAAGGTCATGGATGGAAACACGGGTTCAGAAAAAACCCATCTGTCTGTTAATAAGACGAAGCCAAAAGGCATTTTAGAGGGAAGGAGATAAGAATTTCCCATTTTTTAATTTTTCCCCCGAAACGGATCAGACGCTCCACCGTGACGCCAGCGCCACCGATCCGACTGATTGATTCATGGAGGGCGTTGGTGCCCGACTCGGCCGGTCTTCAACTCGCTACGGACCCGCCACCGTCTTCACTGGTCCGGTCAGGAAGTGGAAGAAGAAATGGATCCACGTTGCGCCGTCCACCCCCGCTTCCAACAACCATTCCCATTCTCAGCGGCACACTAACCCCAACAATGTTACCACCAATGCCACTGCCAACGCTACTACCAACGCTTCGCATCTTTTGCTTTACAAGTGGACGCCTATTACACAGAGTCTCAACAATGGCAACGCCGATGAAAAGAACGCCGGCAAAGAGGAGAGCCCGACGGTCACAGAGGAGCCTCCTCGCCGGAAATTTAAATACATACCGATTGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGCAGTGCAGTAGCGACAAAGGGGGAGCTTCAAAATGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAGTCAGTCTCAGGACAACGGTCATCCAGTGCGCCAAGATTTAAATGAAAGTACTTTGGATTTAAGTCTGAACCTGAATGCTCTCGACGATGGCGGCGAAGCTAGTTCAAAAGCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAACGTTAGAGTGTGTGGATTGCTTGGACCTGTCATTCTACATTTTAGAAGCAGCTGCAGTTTCGTCCTTACCAATTCAATTCTCTTATTGGAACTGAGTTACTTGACATCCCACATCTCTGCTAATCCTGGAAGTATATGGTTCTCTCTAGTTTGCTTATTTGAGCTAATTTTGATTTGTTCACAGAAAATATACAGTACCAATTCTTTTATCCTTAAAATTTGATAGCAATGTAAGAAACTGTAACGTGAGGCTAAGGAATTGTGTACGATTATCCACATGTTGAGATTTTAGCTTTGTTTGACTTCACTGTCAAAATGACTGTCTAATGGACTCACAATCTCTGCTATTTCAATCGATACATGACACTCTTTTTCTCCCA

Coding sequence (CDS)

ATGGAGGGCGTTGGTGCCCGACTCGGCCGGTCTTCAACTCGCTACGGACCCGCCACCGTCTTCACTGGTCCGGTCAGGAAGTGGAAGAAGAAATGGATCCACGTTGCGCCGTCCACCCCCGCTTCCAACAACCATTCCCATTCTCAGCGGCACACTAACCCCAACAATGTTACCACCAATGCCACTGCCAACGCTACTACCAACGCTTCGCATCTTTTGCTTTACAAGTGGACGCCTATTACACAGAGTCTCAACAATGGCAACGCCGATGAAAAGAACGCCGGCAAAGAGGAGAGCCCGACGGTCACAGAGGAGCCTCCTCGCCGGAAATTTAAATACATACCGATTGCTGTGTTAGAGGAACAGAAAAACGAGGCTGCAGAAAATGAAGCCGCTGATAATGTTGAAGATGAAGCTATCAAATCAAATGATGTTGAACCAAGCAGTGCAGTAGCGACAAAGGGGGAGCTTCAAAATGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAGTCAGTCTCAGGACAACGGTCATCCAGTGCGCCAAGATTTAAATGAAAGTACTTTGGATTTAAGTCTGAACCTGAATGCTCTCGACGATGGCGGCGAAGCTAGTTCAAAAGCTGATCACGTTAGAGATGGCAAGAGGAAGGGCTAA

Protein sequence

MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTNATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLEEQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHPVRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG
Homology
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BLAST of Clc01G10470 vs. NCBI nr
Match: XP_004150426.1 (uncharacterized protein LOC101221727 [Cucumis sativus] >KAE8652886.1 hypothetical protein Csa_017664 [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106
Identity = 202/219 (92.24%), Postives = 213/219 (97.26%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPST ASNNHSHSQRHTNPNNVT N
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTTASNNHSHSQRHTNPNNVTAN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN++TNASHLLL+KWTPITQSLNNGNADEKNAGKE++PTVTEEPPRRKFKY+PIAVLE
Sbjct: 61  ATANSSTNASHLLLFKWTPITQSLNNGNADEKNAGKEDTPTVTEEPPRRKFKYMPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHP 180
           EQKNEAAENEA DNVEDEA++S+DVEPSS VATKGELQ+EKPDINDVPMEESQSQDN  P
Sbjct: 121 EQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPMEESQSQDNDRP 180

Query: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
           VRQDLNESTLDLSLNLNALDDGGEASSKADH+RDGKRKG
Sbjct: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 219

[Close]
BLAST of Clc01G10470 vs. NCBI nr
Match: XP_008458970.1 (PREDICTED: uncharacterized protein LOC103498224 [Cucumis melo] >TYK12348.1 putative serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 394.0 bits (1011), Expect = 8.2e-106
Identity = 204/219 (93.15%), Postives = 211/219 (96.35%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPST ASNNHSHSQRHTNPNNV  N
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTTASNNHSHSQRHTNPNNVAAN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN+TTNASHLLL+KWTPITQSLNNGNADEKNAGKE++PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANSTTNASHLLLFKWTPITQSLNNGNADEKNAGKEDTPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHP 180
           EQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQ+EKPDINDVPMEE  SQDN HP
Sbjct: 121 EQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPMEE--SQDNDHP 180

Query: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
           VRQDLNESTLDLSLNLNALDDGGE SSKADH+RDGKRKG
Sbjct: 181 VRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

[Close]
BLAST of Clc01G10470 vs. NCBI nr
Match: XP_038894538.1 (uncharacterized protein LOC120083076 [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPST ASNNHSHSQRHTNPNNVT N
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTTASNNHSHSQRHTNPNNVTAN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN+TTNASHLLLYKWTPITQSLNNGNADEKNAGKEE+PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANSTTNASHLLLYKWTPITQSLNNGNADEKNAGKEETPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHP 180
           EQKNEAAENEAADNVEDEAIKSNDV    AVATKGE+Q+EKPDINDVPMEE  SQDN HP
Sbjct: 121 EQKNEAAENEAADNVEDEAIKSNDV----AVATKGEVQDEKPDINDVPMEE--SQDNDHP 180

Query: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
           VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG
Sbjct: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 213

[Close]
BLAST of Clc01G10470 vs. NCBI nr
Match: XP_023521102.1 (uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 4.1e-97
Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKW+HVAPST ASNNHSHSQRHT P NVTTN
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVAPSTAASNNHSHSQRHTTPTNVTTN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN T NASHLLLYKWTPITQSLNNGN D+KNAGK+++PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANPTNNASHLLLYKWTPITQSLNNGNNDDKNAGKDDTPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQNEKPDINDVPMEESQSQDNGH 180
           EQKNEAAENEAAD VE EA KSNDVEP SAVA+ KGELQ+EKPDINDVPM+E  SQDN H
Sbjct: 121 EQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDE--SQDNDH 180

Query: 181 PVRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
            VRQDLNESTLDLSLNLNAL+D GEA SKADH+RDGKRKG
Sbjct: 181 VVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Clc01G10470 vs. NCBI nr
Match: XP_022925360.1 (uncharacterized protein LOC111432647 [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 192/220 (87.27%), Postives = 202/220 (91.82%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKW+HVAPST ASNNHSHSQRHT P NVTTN
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVAPSTAASNNHSHSQRHTTPTNVTTN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN T NASHLLLYKWTPITQSLNNGN D+KNAGK+++PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANPTNNASHLLLYKWTPITQSLNNGNNDDKNAGKDDTPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQNEKPDINDVPMEESQSQDNGH 180
           EQKNEAAENE AD VE EA KSNDVEP SAVA+ KGELQ+EKPDINDVPM+E  SQDN H
Sbjct: 121 EQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDE--SQDNDH 180

Query: 181 PVRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
            VRQDLNESTLDLSLNLNAL+D GEA SKADH+RDGKRKG
Sbjct: 181 VVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Clc01G10470 vs. ExPASy TrEMBL
Match: A0A5D3CMI7 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001230 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.0e-106
Identity = 204/219 (93.15%), Postives = 211/219 (96.35%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPST ASNNHSHSQRHTNPNNV  N
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTTASNNHSHSQRHTNPNNVAAN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN+TTNASHLLL+KWTPITQSLNNGNADEKNAGKE++PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANSTTNASHLLLFKWTPITQSLNNGNADEKNAGKEDTPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHP 180
           EQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQ+EKPDINDVPMEE  SQDN HP
Sbjct: 121 EQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPMEE--SQDNDHP 180

Query: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
           VRQDLNESTLDLSLNLNALDDGGE SSKADH+RDGKRKG
Sbjct: 181 VRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

[Close]
BLAST of Clc01G10470 vs. ExPASy TrEMBL
Match: A0A1S3CAB6 (uncharacterized protein LOC103498224 OS=Cucumis melo OX=3656 GN=LOC103498224 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.0e-106
Identity = 204/219 (93.15%), Postives = 211/219 (96.35%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPST ASNNHSHSQRHTNPNNV  N
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTTASNNHSHSQRHTNPNNVAAN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN+TTNASHLLL+KWTPITQSLNNGNADEKNAGKE++PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANSTTNASHLLLFKWTPITQSLNNGNADEKNAGKEDTPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHP 180
           EQKNEAAENEAAD+VEDEAIKSNDVEPSS VATKGELQ+EKPDINDVPMEE  SQDN HP
Sbjct: 121 EQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPMEE--SQDNDHP 180

Query: 181 VRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
           VRQDLNESTLDLSLNLNALDDGGE SSKADH+RDGKRKG
Sbjct: 181 VRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

[Close]
BLAST of Clc01G10470 vs. ExPASy TrEMBL
Match: A0A6J1EHR2 (uncharacterized protein LOC111432647 OS=Cucurbita moschata OX=3662 GN=LOC111432647 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.7e-97
Identity = 192/220 (87.27%), Postives = 202/220 (91.82%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKW+HVAPST ASNNHSHSQRHT P NVTTN
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVAPSTAASNNHSHSQRHTTPTNVTTN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
           ATAN T NASHLLLYKWTPITQSLNNGN D+KNAGK+++PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  ATANPTNNASHLLLYKWTPITQSLNNGNNDDKNAGKDDTPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQNEKPDINDVPMEESQSQDNGH 180
           EQKNEAAENE AD VE EA KSNDVEP SAVA+ KGELQ+EKPDINDVPM+E  SQDN H
Sbjct: 121 EQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDE--SQDNDH 180

Query: 181 PVRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRKG 220
            VRQDLNESTLDLSLNLNAL+D GEA SKADH+RDGKRKG
Sbjct: 181 VVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Clc01G10470 vs. ExPASy TrEMBL
Match: A0A6J1JX59 (uncharacterized protein LOC111490478 OS=Cucurbita maxima OX=3661 GN=LOC111490478 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.4e-95
Identity = 189/219 (86.30%), Postives = 201/219 (91.78%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKW+HVAPST ASNNHSHSQRHT P NVTTN
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVAPSTAASNNHSHSQRHTTPTNVTTN 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLE 120
            TAN T NASHLLLYKWTPI+QSLNNGN D+KNAGK+E+PTVTEEPPRRKFKYIPIAVLE
Sbjct: 61  GTANPTNNASHLLLYKWTPISQSLNNGNNDDKNAGKDETPTVTEEPPRRKFKYIPIAVLE 120

Query: 121 EQKNEAAENEAADNVEDEAIKSNDVEPSSAVAT-KGELQNEKPDINDVPMEESQSQDNGH 180
           EQKNEAAENEAAD VE EA KSNDVEP SAVA+ KG+LQ+EKP+INDVPM+E  SQDN H
Sbjct: 121 EQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGDLQDEKPNINDVPMDE--SQDNDH 180

Query: 181 PVRQDLNESTLDLSLNLNALDDGGEASSKADHVRDGKRK 219
            VRQDLNESTLDLSLNLNAL+D GEA SKADH+RDGKRK
Sbjct: 181 VVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK 217

[Close]
BLAST of Clc01G10470 vs. ExPASy TrEMBL
Match: A0A6J1CLM1 (uncharacterized protein LOC111012736 OS=Momordica charantia OX=3673 GN=LOC111012736 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.4e-73
Identity = 155/198 (78.28%), Postives = 167/198 (84.34%), Query Frame = 0 

Query: 27  KWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTNATANAT-----TNASHLLLYKWTPIT 86
           KWKKKW+HVAPS+ ASN HSHSQRHTN N +  NATA AT     TNASHLLLYKWTPIT
Sbjct: 17  KWKKKWVHVAPSSAASNAHSHSQRHTNANTINANATATATATANGTNASHLLLYKWTPIT 76

Query: 87  QSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIAVLEEQKNEAAENEAADNVEDEAIK 146
           QSLNNGN D+KNAGKEE+P V EEPPRRKFKY+PIAVLEEQKNEAAENEA+D VEDEA K
Sbjct: 77  QSLNNGNTDDKNAGKEETPPVVEEPPRRKFKYMPIAVLEEQKNEAAENEASDKVEDEANK 136

Query: 147 SNDVEPSSAVATKGELQNEKPDINDVPMEESQSQDNGHPVRQDLNESTLDLSLNLNALDD 206
           S DVEP +    KGEL +EKPDINDVPMEE  SQDN H VRQDLNESTLDLSLNLNAL+D
Sbjct: 137 SYDVEPMA--NAKGELLDEKPDINDVPMEE--SQDNDHAVRQDLNESTLDLSLNLNALND 196

Query: 207 GGEASSKADHVRDGKRKG 220
            GE  SKADH+RDGKR+G
Sbjct: 197 DGETGSKADHIRDGKRRG 210

[Close]
BLAST of Clc01G10470 vs. TAIR 10
Match: AT4G22320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). )

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 123/233 (52.79%), Postives = 147/233 (63.09%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKW+HV+PS+   NN+S S       +V   
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVNG 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNAD---EKNAGKEES-PTVTEEPPRRKFKYIPI 120
            + +  +N SHLLLYKW P++Q+  NGN D   E N+  E++  TV E+PPRR+FKY+PI
Sbjct: 61  GSNSDGSNGSHLLLYKWAPLSQN-GNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 AVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-NEKPD 180
           AVLEEQK E  E E  D +E  D+  + N VE    V            K E++  EKPD
Sbjct: 121 AVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKPD 180

Query: 181 INDVPMEESQ------SQDNGHPVRQDLNESTLDLSLNLNALDDGGEASSKAD 211
           INDVPME+ Q        D    VRQDLNEST+DL LNLNA D   E   K D
Sbjct: 181 INDVPMEDIQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 232

[Close]
BLAST of Clc01G10470 vs. TAIR 10
Match: AT4G22320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). )

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-48
Identity = 123/234 (52.56%), Postives = 147/234 (62.82%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNVTTN 60
           MEGVGARLGRSSTRYGPATVFTGPVRKWKKKW+HV+PS+   NN+S S       +V   
Sbjct: 1   MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVNG 60

Query: 61  ATANATTNASHLLLYKWTPITQSLNNGNAD---EKNAGKEES-PTVTEEPPRRKFKYIPI 120
            + +  +N SHLLLYKW P++Q+  NGN D   E N+  E++  TV E+PPRR+FKY+PI
Sbjct: 61  GSNSDGSNGSHLLLYKWAPLSQN-GNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 AVLEEQKNEAAENEAADNVE--DEAIKSNDVEPSSAV----------ATKGELQ-NEKPD 180
           AVLEEQK E  E E  D +E  D+  + N VE    V            K E++  EKPD
Sbjct: 121 AVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKPD 180

Query: 181 INDVPMEESQ-------SQDNGHPVRQDLNESTLDLSLNLNALDDGGEASSKAD 211
           INDVPME+ Q         D    VRQDLNEST+DL LNLNA D   E   K D
Sbjct: 181 INDVPMEDIQQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 233

[Close]
BLAST of Clc01G10470 vs. TAIR 10
Match: AT5G55210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 5.8e-17
Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 0 

Query: 1   MEGVGARLGRSSTRY-GPA--TVFTGPVRKWKKKWIHVAPSTPASNNHSHSQRHTNPNNV 60
           MEGVG+RL R+S+RY GPA   VF+G VRKWKKKW+ V+ S+      S S    N NN 
Sbjct: 1   MEGVGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNGRNNSNN- 60

Query: 61  TTNATANATTNASHLLLYKWTPITQSLNNGNADEKNAGKEESPTVTEEPPRRKFKYIPIA 120
                   + +  HLLL+KWTP+T +     A + N   E     TEE P+R+F+Y PIA
Sbjct: 61  --------SNSPHHLLLHKWTPLTSA--TVTASDANGSGE-----TEESPKRRFRYAPIA 120

Query: 121 VLEEQKNEAAENEAADNVED 138
           +LE ++   +++   +  E+
Sbjct: 121 MLEHREKVISKDSEIEETEE 124

The following BLAST results are available for this feature:
BLAST of Clc01G10470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150426.12.2e-10692.24uncharacterized protein LOC101221727 [Cucumis sativus] >KAE8652886.1 hypothetica... [more]
XP_008458970.18.2e-10693.15PREDICTED: uncharacterized protein LOC103498224 [Cucumis melo] >TYK12348.1 putat... [more]
XP_038894538.11.2e-10494.06uncharacterized protein LOC120083076 [Benincasa hispida][more]
XP_023521102.14.1e-9787.73uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo][more]
XP_022925360.11.2e-9687.27uncharacterized protein LOC111432647 [Cucurbita moschata][more]
BLAST of Clc01G10470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc01G10470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CMI74.0e-10693.15Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3CAB64.0e-10693.15uncharacterized protein LOC103498224 OS=Cucumis melo OX=3656 GN=LOC103498224 PE=... [more]
A0A6J1EHR25.7e-9787.27uncharacterized protein LOC111432647 OS=Cucurbita moschata OX=3662 GN=LOC1114326... [more]
A0A6J1JX592.4e-9586.30uncharacterized protein LOC111490478 OS=Cucurbita maxima OX=3661 GN=LOC111490478... [more]
A0A6J1CLM13.4e-7378.28uncharacterized protein LOC111012736 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
BLAST of Clc01G10470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G22320.21.7e-4852.79unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G22320.12.2e-4852.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G55210.15.8e-1740.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..143
NoneNo IPR availablePANTHERPTHR34572GOLGIN FAMILY A PROTEINcoord: 1..211
NoneNo IPR availablePANTHERPTHR34572:SF1GOLGIN FAMILY A PROTEINcoord: 1..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G10470.1Clc01G10470.1mRNA