Clc01G10090 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G10090
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr01: 12593404 .. 12600247 (+)
RNA-Seq ExpressionClc01G10090
SyntenyClc01G10090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTCATATAGATAACCCCACATCAATGCATATCCATAATGGACGTTCCCATAACTTTTCTTCTTCCATTTCCTCAATCTTTCATCCAGCTGCTATAATCTCTGCTCAGCGCATTCATGTAAGTTCAACCGTTTGTCTTCTGCTTTGCTTCAACATTTCCTCTTCTCCAATGCATCTTCACATTACTTGTTCTGTTAAGCATAGGACCTTAGTTTTCCCATATTAATTTTACTTGCAAACACTCCAATGCTGGGCTGCAACTTTGGCCTTTGCAATTCGTTACGGTTTATATGTGTAGATTTTGGAATGGATATTGGATTGTTTTTTCCGAAAATTTCATATTACTGATGAATGAATGTGTTCGTTGTTGTGTTTGAATGAGTTACTGTAACTTCATCTAGTGCTTTTCTTTTGAAGCTTATTTTCATGTCAAAAGTAATTGTTCTCTTCCTTCATTTCCAGATTTTTCTATTTATTTATAGGGTTTTGTACCTTTTGTTTCTTAAAAAGGATTTATGTTTTACGCACATGTCAATGGAACCCATGTTTTGTCAATTAGAGTAGTAATCCATGTATCTTACAAATATTGTGAGGTGTCTCTACTTTTTCAATATTAGATACTCAACATGCCCCTTCAAGATGGTGCTGCTTTGGGTTTACCATTTTTGGATCGACCGAATGCCTTTTTGGTTTCATTGGCTCTGATACCATATTAAATAACACTGAGGTCCATCTCAAAATTAATTGGTAATAAGTGGAGTAGTCCATGTATCTAATAAAAATTGTGAAGTCTCTCTACTTTCCTGATGTGGGATCCTCAACAAATGTATTCTATCCTTATCTTTAAGGGCTACATGTCTATATGATTGCAATGAAAGCAGATAGAAGCCTGGACATTTATTTGTATACTTATAACGCATGCTTTCATTATCTTTGATTGTTATGCCAATGTGTCTACGGTTGCAATAAAAAACAGAAAGAAGCCTGAACATTTGTTTGTGATTTGACCTTTTTTTTGGAGGAGCATTCGTTAATTGTATATTTGTATGGAAAACTCTACAGGTTGATTTCTGGAAGCGTAGTTAACAACATATATTTACAACCGAGATGTTGTGGAAATTATTTCAAATGGACAGTGAAATGCGCAGACAATGAAGTTGTTGAGAAATCCAGACGTGATGGTCTTTATGTTGATAAACGTGGAAAATTGAGAACCTTCAATCGCAAAAGATTGTCAAGAAAAAGATGTAAGATATGCTACAAACTTGAAACTGTATTTTGTACTTTAGTTTTGGCGTATGTTATCTTTATTTAAATTATCACTTCGTCCAGGTGGTTCCTTGAGGGGACGAGGATGGAAGTATGGATCTGGTTTTGTAGATGGAATCTTCCCTGTTTTGGGCCCTCTTGCTCAACAGATTATGGACTTTGTAAGGGAAGAAGTAGATTATATGGGACTCTGGGATTCTCTTGACATGCTACCTGCCACTAATTCAACTTGGGATGATATCATCAGTGTAGCTGTGCAACTTCGTCTCAATAAGAAGTGGGGTCCAATCATATTGGTAGGAATTTACTCTGATGCTTTAGTCATACAACAAACCATATCCAAGACTTCCTCAACTTCGTTGTTTTTTCCTTTCAACGATTTTATGCTTATAGTTTAGTTGGACGGTAAAACACATAGTTATGCAAATTCATGGGATAAGAGAAGTTCATGCTAGCTTGACAAACAATTAAAATGGATTAAACAAAATCTCAGGCCACAGCGTGCTTTCCTTTTGTGTACGTGAAGAGAGAATTCATGCAAGCTGTATGAATAATTTGAATGGATTAAACAAATGTCAGGAGAGAGAGAGAGCCTTATGTTCATCAAAATGTCTTTGTGCTTTGTGAAACGTGTACTTATACTTGTTATTGCTGCTGAAATTCCGTAGATATGTGAATGGATATTGAACAAGAGTTCCTTCCGACCAGATGTGATTATATACAATCTACTTATGGATGCTTATGGGCAGAGATCGCTGTATAAGGACGTAGAATCTACGTACTTAGAACTTCTTGAATCTCATTGCATTCCAACAGAAGATACTTATGCTCTGCTTCTAAAGGCCTATTGCAAATCTGGGTTGCTAGAGAAGGCTGAAGCTGTCTTTGCTGAAATGCGAAAGTATGGCCTTTCACCAAGTATGTTTATTATTTATCAGTCATCTGCTACACAAGGGAGTTAGTATTATCAACTTCTAACGGCTTAGAAATTTAAGAAGGGAATATTATAACATGTGCTGTTTGTTGCATGTGCGTTGGTATTGAATTTCTCTTCAAAAATAATTCTTAGTCATACAAAAGTTTTCTATGTGAAATCATTTCTCCACCATTAAATTATTTGTGCTGCATCATATTTTTTTATTTTATTTTATTTATTTATTTATTATTATTATTATTATTATTATTTTTGTTGTCAGGAAGACGAGTGATGAATATGATTAAACAAGGCATTTCTGCCATGTCATGTCAATTCCTGGCTAGTTGTTTTTTGAGCTTTTAAGTAATTTAAAGTAGAAATTATTTGGTATTTCCCCAACACCAAAACTTCATTATCTCTAATTCCTATCAATCATTTCCATCAAAGAATCAGCGGATAATCATTACAAGTGTCAAAGATCTTGCAGAACTGCCTTATCATTCATTTTGCAGAGTGGATGACATGAACTGATCCCAGTTCTAGCACTAAGCACTAACAGACATCCATGCTACTAGCCTGCGAATGTTTGTGCATACTGAGTTTGGGAAAACTTAGGTTAGCAAAGAATGAACAACTTCATATTGAAGAATTTTGAACATATTATAAAATTCTCTACAATTGTAGTGGTTATGATGAGAATAACAAATGAAACCTCATGGGATATGAGATTTTTGGGAGGAAGGGTAAGAAAGGTCTTCAGGATTCCCAAAAATATGCACTACGAGTTGCGAACTTTAGTTTTAGGGGATAAGCATACTATTTCCTTTTTGTGGTTACGCGGCAGGCATTACTTATAAGTTATAAGTTAGTTATATGATACTCTACGACCATATTGCTACAAGTGGCATGAGAAGTTGAATGTTTGCCTTGCAAGATAAATTAACAGAAACAAAGAAGAATTTGAAATTTATGTCAATACAGGTGCAATTGTGTACAATGCTTATATTGATGGATTGGTAAAGGGTGGAAACAACGTCAAAGCAGTAGAGATCTTTCACAGGATGAAGAGAGATGGCTGCCAACCCTCCACAGATACTTACACAATGTTAATAAACGTGTATGGAAAGGTGAGCCCAAAGAGGTTAAAGTTAAGAACTCTTTTATCAGCATTTGAATTTTCGTTGTCTTATTGCTTCAGTACACGTATGATGGATCAAGTAATATCTAGCTTACTGAAGCGTTTAAATTCTGTTTTGGGTTGTAATGATTTCTTCACGATACTTTATTATTTTAGTTTTTTTTTTCCAAAAATATTTATTATTGTTTTTCACAATACCTTATGCGAATACTTCGTAATTCTTCTTTCCTTTTCATTTTCTGAATCTGGATTTATAACTTTGTTAATTTAGCTAATTTAGCAACAGGATAACTGATCTTCTTGTTTCATTTTGAAATCTTAATATTTTATATTTCACTTTTCATGAAAATAGTATATAATGAAAATGAATAAGAATAAGGGAAAGGCATTTTGAATTAATATTTACTTCTGGGAAGATCATTGATTTCTGGTCGGGACTGGGGTTTAATTAGGTGAATGAACCTTATCGTGGAATATGAAGTTGATTCATCAAGCCACACTGTTGCAGGTTCCCATGTGTGGTTTAGCCTAAGTTCAATTCGGGTTTGTTGAATGCATGTGTAATTTGAGATCAAATGGAAGAAGCAGTCTTCTACATTTACACGAAAAAACTTATGGTCGGAATGCAAGTCATGTGGTAGTAGGACAGATCAGTTTATCTGATAGAAATCCACTCTTCAATTTCTTCATCCTTTAAGACTCCTCTCAACCTCAAGTCTCATGAAGCATTATGAACCAAAATTGAGGATGGCCATAATGCATTCTCTTCCAAAGAAAGTCTCCAAATCCACCAAGAAAAAGTGCCATATTTCCGTACGTAAGGTGGTTGACAATCCCTGGGCTATCCCTTTCAAATGGGAGAGACACCATTCTCCTGTTAATTAGGTGTGACACACCATCCAAACTTGGTCCTACATGTTTCTGTATGAAGTTTCTAATTTTCTTCTCAATTTCAAAGACAATATTGTTGGGTGCTTTAGAATGAAAAATAAATAAATAGGAAAGCTCGAGAGAACCAACTAGTTCAAGTAATCTGCGCTCTATAGAAATCCTTTCCATCAAGAAATCCTACAAGAAACCCTTAGGAGTACCTAGCAACGGAAGGTCCAAATATTATAGAGAGCAGTCTCCTGCTGGGCATAATCCTCAATTATTCGCCCAATCTCTTCAATGGAGCGATTAATGCCGTACCAGCCACAATAAGTTTAGCTATCTTAAGGCCTGAAGCTTCTGTAAAGATAGTGACAATCCTGAATAAAAGCACTGGAATCTACTGTAGTATTTATGTGGATTTCAAATTAGTTTTGATTTTTAATATTTTCCCTTATAGCCTAATAATCATAGGGTTTATGCAGGAAAGTAAGTCCCATATGGCACTAAAGATATTTGACGAAATGAGAACTCAAAGGTGCAAACCTAACATTTGCACCTTTACAGCTTTAGTAAACGCACTTGCTAGAGAGGGACTTTGTGAGAAAGCAGAAGAAATATTTGAGCAAATGCAAGAGGCTGGTTATGAACCTGATGTCTATGCTTATAATGCCCTCATGGAGTCATATAGGTAAAACTAATCTGTTAGATCTTCTTGTAGATATAGTCTTCATTCTTGAAAGTAAAATGCGTATTCACTGTTCACTTCAAAACGGTCGACAGTACTTGAAGGTCTGGCTGGCATATGGACACTGATGACTAGTGAGCTTTAGTAGGCAATTGAAATTCAATATTCCTCTTCTAATAGTTGTAATATTTCTGACGATCCTTGTACTGTATTCTTTTTTTTTTTTTTTTTTTTTCCTTGCAAGAACAATTCTCCTCTACTTTTTTAATGCATCATGCTGCGGTTAAGAACAATGTACAAGAATTGCTTATAAATTTGATGTCTTTTTGCTTAAGCTTTATGTTTTCATGCATTAGAAAAATTTAGGCCCCGTTTGGTAACCATTGATTTTTGGTTTTTAAAATTTAGCCTATAAACACACTCCTTTCACCTCTAAATTTCTTGATTTGTTATCTACTTCTTACCAATGATTTAAAAACCCAAGCCAAATCTTGAAAAAAAAATAGTTTTTAAAAACTTGTTGTTTTTTAGAATTGGGCTAAAATTCAACTCTTGTACTTAAGAAAGAGGCAAACCAGTGTAAGAAATTGACAGAAAATAGACTTAATTTTCAAAAACCAAAAACAAAAAATGAAATGGTTACCAATTAGGACCTTAGATTAATCTAATTGCCTTCCAATGTAATTTGTTCTTCACTAAAAAGTGTCCCTTTTTGGTCATTTGCAGTCGTGCTGGTTTTCCATATGGAGCTGCAGAAATCTTTTCACTCATGCAACACATGGGATGTGAACCAGATAGAGCGTCATATAACATCATGGTGGATGCATATGGAAGAGCTGGTCTTCATGAAGGTATGTAAACTCAAGTTACATTTAGTAATTCTTTCATTGATAATTCATTATGACATCAAGGTTTGCACTCATTGCAAAATCCATATTATCTGTTATCAAAATTCTTGTATTAGAAACAAAAAAGAGAACCAACTCAAATTATGTGTGTTGCAATAGGAATGTTGCATTCACTGACAAGGGAAGGATCTGTAAAACCATGTTTAAATTGAACTATCCTGCCATTGTATTTCCACCATTTTCTTCCAGCTGCCAATCACCTCCTATAGTTTTCTTTTAAGGAAAGGGAGACAAAGTCCTAACTAAATCATAACACAAGCTAACCATTCCATCTATCATATCAGTCAAGTCGATCTGATTCGTTCTTTTGTTATATTGCTTTTCTAATTCCAAGCTTTATGCAATTTAGATGCACAAGCTGTTTTCGAAGAAATGAAACGAATTGGGATAACCCCAACAATGAAATCCCACATGCTTCTTTTATCTGCCTATTCAAACGCTGGCAATGCAGCTAAATGCGAAGATATCATTGGTCAGATGCATAAATCAGGTCTGAAACCAGACACATTTGTGTTGAACAGCATGCTTAATCTTTATGGCCGTTTAGGTCAATTTGGAAAAATGGAAGATCTTCTTTCTACCATGCAAAAAGGACCATATCGAGCAGATATCAGCACGTACAACATCTTGATCAATGTATACGGACGAGCAGGCTTTGTGGAGAGAATGGAGGAGCTGTTTCAATTGCTTCCAGCAAAAAATCTAGAACCTGACGTCGTGACGTGGACTTCACGGATTGGAGCCTACTCGAGAAAGAAGCTTTACAAAAGATGCTTAGAAATATTTGAAGAGATGATTGATGCTGGTTGTTATCCAGATGGAGGAACTGCCAAAGTACTTCTCTCAGCATGTTCAAGTGAAGAACAGATTGAACAGGTTACCAATGTTGTTAGGACGATGCACAAAGATGTCAAAACTCTTTTGCCTATCTGAATTTTTTTAATCCTTTGCCTTATTTCTACATTCTTATGTTCTATAATAGAGTTAGAGTTCAACTAAAAATTACATTTGATCAACATACTCGTAAGTTAAAATCCTCTACCACACAGGTTTAA

mRNA sequence

GTTTCATATAGATAACCCCACATCAATGCATATCCATAATGGACGTTCCCATAACTTTTCTTCTTCCATTTCCTCAATCTTTCATCCAGCTGCTATAATCTCTGCTCAGCGCATTCATGACCTTAGTTTTCCCATATTAATTTTACTTGCAAACACTCCAATGCTGGGCTGCAACTTTGGCCTTTGCAATTCGTTACGGTTGATTTCTGGAAGCGTAGTTAACAACATATATTTACAACCGAGATGTTGTGGAAATTATTTCAAATGGACAGTGAAATGCGCAGACAATGAAGTTGTTGAGAAATCCAGACGTGATGGTCTTTATGTTGATAAACGTGGAAAATTGAGAACCTTCAATCGCAAAAGATTGTCAAGAAAAAGATGTGGTTCCTTGAGGGGACGAGGATGGAAGTATGGATCTGGTTTTGTAGATGGAATCTTCCCTGTTTTGGGCCCTCTTGCTCAACAGATTATGGACTTTGTAAGGGAAGAAGTAGATTATATGGGACTCTGGGATTCTCTTGACATGCTACCTGCCACTAATTCAACTTGGGATGATATCATCAGTGTAGCTGTGCAACTTCGTCTCAATAAGAAGTGGGGTCCAATCATATTGATATGTGAATGGATATTGAACAAGAGTTCCTTCCGACCAGATGTGATTATATACAATCTACTTATGGATGCTTATGGGCAGAGATCGCTGTATAAGGACGTAGAATCTACGTACTTAGAACTTCTTGAATCTCATTGCATTCCAACAGAAGATACTTATGCTCTGCTTCTAAAGGCCTATTGCAAATCTGGGTTGCTAGAGAAGGCTGAAGCTGTCTTTGCTGAAATGCGAAAGTATGGCCTTTCACCAAGTGCAATTGTGTACAATGCTTATATTGATGGATTGGTAAAGGGTGGAAACAACGTCAAAGCAGTAGAGATCTTTCACAGGATGAAGAGAGATGGCTGCCAACCCTCCACAGATACTTACACAATGTTAATAAACGTGTATGGAAAGGAAAGTAAGTCCCATATGGCACTAAAGATATTTGACGAAATGAGAACTCAAAGGTGCAAACCTAACATTTGCACCTTTACAGCTTTAGTAAACGCACTTGCTAGAGAGGGACTTTGTGAGAAAGCAGAAGAAATATTTGAGCAAATGCAAGAGGCTGGTTATGAACCTGATGTCTATGCTTATAATGCCCTCATGGAGTCATATAGTCGTGCTGGTTTTCCATATGGAGCTGCAGAAATCTTTTCACTCATGCAACACATGGGATGTGAACCAGATAGAGCGTCATATAACATCATGGTGGATGCATATGGAAGAGCTGGTCTTCATGAAGATGCACAAGCTGTTTTCGAAGAAATGAAACGAATTGGGATAACCCCAACAATGAAATCCCACATGCTTCTTTTATCTGCCTATTCAAACGCTGGCAATGCAGCTAAATGCGAAGATATCATTGGTCAGATGCATAAATCAGGTCTGAAACCAGACACATTTGTGTTGAACAGCATGCTTAATCTTTATGGCCGTTTAGGTCAATTTGGAAAAATGGAAGATCTTCTTTCTACCATGCAAAAAGGACCATATCGAGCAGATATCAGCACGTACAACATCTTGATCAATGTATACGGACGAGCAGGCTTTGTGGAGAGAATGGAGGAGCTGTTTCAATTGCTTCCAGCAAAAAATCTAGAACCTGACGTCGTGACGTGGACTTCACGGATTGGAGCCTACTCGAGAAAGAAGCTTTACAAAAGATGCTTAGAAATATTTGAAGAGATGATTGATGCTGGTTGTTATCCAGATGGAGGAACTGCCAAAGTACTTCTCTCAGCATGTTCAAGTGAAGAACAGATTGAACAGGTTACCAATGTTGTTAGGACGATGCACAAAGATGTCAAAACTCTTTTGCCTATCTGAATTTTTTTAATCCTTTGCCTTATTTCTACATTCTTATGTTCTATAATAGAGTTAGAGTTCAACTAAAAATTACATTTGATCAACATACTCGTAAGTTAAAATCCTCTACCACACAGGTTTAA

Coding sequence (CDS)

ATGCATATCCATAATGGACGTTCCCATAACTTTTCTTCTTCCATTTCCTCAATCTTTCATCCAGCTGCTATAATCTCTGCTCAGCGCATTCATGACCTTAGTTTTCCCATATTAATTTTACTTGCAAACACTCCAATGCTGGGCTGCAACTTTGGCCTTTGCAATTCGTTACGGTTGATTTCTGGAAGCGTAGTTAACAACATATATTTACAACCGAGATGTTGTGGAAATTATTTCAAATGGACAGTGAAATGCGCAGACAATGAAGTTGTTGAGAAATCCAGACGTGATGGTCTTTATGTTGATAAACGTGGAAAATTGAGAACCTTCAATCGCAAAAGATTGTCAAGAAAAAGATGTGGTTCCTTGAGGGGACGAGGATGGAAGTATGGATCTGGTTTTGTAGATGGAATCTTCCCTGTTTTGGGCCCTCTTGCTCAACAGATTATGGACTTTGTAAGGGAAGAAGTAGATTATATGGGACTCTGGGATTCTCTTGACATGCTACCTGCCACTAATTCAACTTGGGATGATATCATCAGTGTAGCTGTGCAACTTCGTCTCAATAAGAAGTGGGGTCCAATCATATTGATATGTGAATGGATATTGAACAAGAGTTCCTTCCGACCAGATGTGATTATATACAATCTACTTATGGATGCTTATGGGCAGAGATCGCTGTATAAGGACGTAGAATCTACGTACTTAGAACTTCTTGAATCTCATTGCATTCCAACAGAAGATACTTATGCTCTGCTTCTAAAGGCCTATTGCAAATCTGGGTTGCTAGAGAAGGCTGAAGCTGTCTTTGCTGAAATGCGAAAGTATGGCCTTTCACCAAGTGCAATTGTGTACAATGCTTATATTGATGGATTGGTAAAGGGTGGAAACAACGTCAAAGCAGTAGAGATCTTTCACAGGATGAAGAGAGATGGCTGCCAACCCTCCACAGATACTTACACAATGTTAATAAACGTGTATGGAAAGGAAAGTAAGTCCCATATGGCACTAAAGATATTTGACGAAATGAGAACTCAAAGGTGCAAACCTAACATTTGCACCTTTACAGCTTTAGTAAACGCACTTGCTAGAGAGGGACTTTGTGAGAAAGCAGAAGAAATATTTGAGCAAATGCAAGAGGCTGGTTATGAACCTGATGTCTATGCTTATAATGCCCTCATGGAGTCATATAGTCGTGCTGGTTTTCCATATGGAGCTGCAGAAATCTTTTCACTCATGCAACACATGGGATGTGAACCAGATAGAGCGTCATATAACATCATGGTGGATGCATATGGAAGAGCTGGTCTTCATGAAGATGCACAAGCTGTTTTCGAAGAAATGAAACGAATTGGGATAACCCCAACAATGAAATCCCACATGCTTCTTTTATCTGCCTATTCAAACGCTGGCAATGCAGCTAAATGCGAAGATATCATTGGTCAGATGCATAAATCAGGTCTGAAACCAGACACATTTGTGTTGAACAGCATGCTTAATCTTTATGGCCGTTTAGGTCAATTTGGAAAAATGGAAGATCTTCTTTCTACCATGCAAAAAGGACCATATCGAGCAGATATCAGCACGTACAACATCTTGATCAATGTATACGGACGAGCAGGCTTTGTGGAGAGAATGGAGGAGCTGTTTCAATTGCTTCCAGCAAAAAATCTAGAACCTGACGTCGTGACGTGGACTTCACGGATTGGAGCCTACTCGAGAAAGAAGCTTTACAAAAGATGCTTAGAAATATTTGAAGAGATGATTGATGCTGGTTGTTATCCAGATGGAGGAACTGCCAAAGTACTTCTCTCAGCATGTTCAAGTGAAGAACAGATTGAACAGGTTACCAATGTTGTTAGGACGATGCACAAAGATGTCAAAACTCTTTTGCCTATCTGA

Protein sequence

MHIHNGRSHNFSSSISSIFHPAAIISAQRIHDLSFPILILLANTPMLGCNFGLCNSLRLISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRKRCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI
Homology
[Close]
BLAST of Clc01G10090 vs. NCBI nr
Match: XP_038895421.1 (pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Benincasa hispida])

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/572 (97.38%), Postives = 566/572 (98.95%), Query Frame = 0 

Query: 62  GSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRKRCG 121
           GSVVNNIYLQPRCCG+ F+WTVKCADNEVVEKSR DGLYVDKRGKLRTFNRKRLSRKRCG
Sbjct: 5   GSVVNNIYLQPRCCGSNFRWTVKCADNEVVEKSRHDGLYVDKRGKLRTFNRKRLSRKRCG 64

Query: 122 SLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDDIIS 181
           SLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLD LPATNSTWDDIIS
Sbjct: 65  SLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDRLPATNSTWDDIIS 124

Query: 182 VAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLELLES 241
           VAVQLRLNKKW PIILICEWILNKSSFRPDVI+YNLLMDAYGQRSLYKDVESTYLELL+S
Sbjct: 125 VAVQLRLNKKWAPIILICEWILNKSSFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLDS 184

Query: 242 HCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKA 301
           HCIPTEDTYALLLK YCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKA
Sbjct: 185 HCIPTEDTYALLLKPYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKA 244

Query: 302 VEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTALVNA 361
           VEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMR+QRCKPNICTFTALVNA
Sbjct: 245 VEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRSQRCKPNICTFTALVNA 304

Query: 362 LAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPD 421
           LAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPD
Sbjct: 305 LAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPD 364

Query: 422 RASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCEDIIG 481
           RASYNI+VDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGN AKCEDIIG
Sbjct: 365 RASYNIVVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNVAKCEDIIG 424

Query: 482 QMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYGRAG 541
           QMHKSGLKPDTFV+NSMLNLYGRLGQFGKMEDLLSTM+KGPYRADISTYNILINVYGRAG
Sbjct: 425 QMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLLSTMEKGPYRADISTYNILINVYGRAG 484

Query: 542 FVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGGTAK 601
           FVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGGTAK
Sbjct: 485 FVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGGTAK 544

Query: 602 VLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           VLLSACSSEEQIEQVTNVVRTMHKDVKTLLP+
Sbjct: 545 VLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. NCBI nr
Match: XP_004145440.1 (pentatricopeptide repeat-containing protein At2g35130 [Cucumis sativus] >KGN66867.1 hypothetical protein Csa_007332 [Cucumis sativus])

HSP 1 Score: 1137.1 bits (2940), Expect = 0.0e+00
Identity = 551/575 (95.83%), Postives = 567/575 (98.61%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LISGSVVNNIYLQPRCCG+ ++WTVKCA++EVVEKSRRDGLYVDKRGK RTFNRKRLSRK
Sbjct: 2   LISGSVVNNIYLQPRCCGSNYRWTVKCANSEVVEKSRRDGLYVDKRGKFRTFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIM+FVREEVDYMGLWDSLD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMEFVREEVDYMGLWDSLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKWGPIILICEWI+NKS+FRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
           VKAVEIFHRMKRDGCQP+TDTYTMLINVYGKESKSHMA  IFDEMRTQRCKPNICTFTAL
Sbjct: 242 VKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC
Sbjct: 302 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYS+AGN AKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKMEDL STMQKGP RADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLE+FE+MIDAGCYPDGG
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSSEEQIEQVTNVVRTMHKD+KTLLP+
Sbjct: 542 TAKVLLSACSSEEQIEQVTNVVRTMHKDLKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. NCBI nr
Match: XP_023520351.1 (pentatricopeptide repeat-containing protein At2g35130 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 549/575 (95.48%), Postives = 562/575 (97.74%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LI GSVVNNIYLQPRCCG  F+WTVKCA+NEVVEKSRRDG+YVDKRGKLRTFNRKRLSRK
Sbjct: 2   LIFGSVVNNIYLQPRCCGTDFRWTVKCAENEVVEKSRRDGVYVDKRGKLRTFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGP AQQIMDFVREEVDYMGLWD LD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPTAQQIMDFVREEVDYMGLWDFLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKW PIILICEWILNKSSFRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWAPIILICEWILNKSSFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKA CKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKACCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
            KAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMR+QRCKPNICTFTAL
Sbjct: 242 AKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRSQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNA AREGLCEKAEEIFEQ+QEAGYEPDVYAYNALMESYSRAG+PYGAAEIFSLMQHMGC
Sbjct: 302 VNAFAREGLCEKAEEIFEQLQEAGYEPDVYAYNALMESYSRAGYPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQ+VFEEM+RIGITPTMKS MLLLSAYSNAGNAAKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQSVFEEMRRIGITPTMKSFMLLLSAYSNAGNAAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQF KMEDLLSTMQKGPYRADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVVNSMLNLYGRLGQFEKMEDLLSTMQKGPYRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGF+ERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG
Sbjct: 482 RAGFLERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSS EQIEQVTNVVRT+HKDVKTLLP+
Sbjct: 542 TAKVLLSACSSVEQIEQVTNVVRTIHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. NCBI nr
Match: XP_008459028.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Cucumis melo])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 548/575 (95.30%), Postives = 563/575 (97.91%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LI GSVVNNIYLQP CCG+ F+ TVKC D+EVVEKSRRDGLYVDK+GK R+FNRKRLSRK
Sbjct: 2   LIFGSVVNNIYLQPGCCGSNFRCTVKCGDSEVVEKSRRDGLYVDKQGKFRSFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIM+F+REEVDYMGLWDSLD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMEFLREEVDYMGLWDSLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKWGPIILICEWILNKS+FRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWGPIILICEWILNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
           VKAVEIF RMKRDGCQP+TDTYTMLINVYGKESKSHMA+ IFDEMRTQRCKPNICTFTAL
Sbjct: 242 VKAVEIFQRMKRDGCQPATDTYTMLINVYGKESKSHMAMNIFDEMRTQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC
Sbjct: 302 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYS AGNAAKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSKAGNAAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKMEDL STMQKGP RADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLE+FE+MIDAGCYPDGG
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLP+
Sbjct: 542 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. NCBI nr
Match: XP_023001551.1 (pentatricopeptide repeat-containing protein At2g35130 [Cucurbita maxima])

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 547/575 (95.13%), Postives = 562/575 (97.74%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LI GSVVNNIYLQPRCCG  F+WTVKCA+NEVVEKSRRDG+YVDKRGKLRTFNRKRLSRK
Sbjct: 2   LIFGSVVNNIYLQPRCCGTDFRWTVKCAENEVVEKSRRDGVYVDKRGKLRTFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGP AQQIMDFVREEVDYMGLWD LD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPTAQQIMDFVREEVDYMGLWDFLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKW PIILICEWILNKSSFRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWAPIILICEWILNKSSFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKA CKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKACCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
            KAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSH+ALKIFDEMR+QRCKPNICTFTAL
Sbjct: 242 GKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHVALKIFDEMRSQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNA AREGLCEKAEEIFEQ+QEAGYEPDVYAYNALMESYSRAG+PYGAAEIFSLMQHMGC
Sbjct: 302 VNAFAREGLCEKAEEIFEQLQEAGYEPDVYAYNALMESYSRAGYPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQ+VFEEM+RIG+TPTMKS MLLLSAYSNAGNAAKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQSVFEEMRRIGMTPTMKSFMLLLSAYSNAGNAAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQF KMEDLLSTMQKGPYRADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVVNSMLNLYGRLGQFEKMEDLLSTMQKGPYRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGF+ERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG
Sbjct: 482 RAGFLERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSS EQIEQVTNVVRT+HKDVKTLLP+
Sbjct: 542 TAKVLLSACSSVEQIEQVTNVVRTIHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 1.8e-236
Identity = 390/573 (68.06%), Postives = 480/573 (83.77%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           L++G+ +N +++       Y  + V   +   V+  +++G  +D+RGKL+ FNRK+LSRK
Sbjct: 2   LVAGNALNCLFIDSSGFQRYLGFGVTNLNGATVKSYKQEGFVIDERGKLKRFNRKKLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVL P+AQ+I+ F+++E D   + D L  LP+T+++WDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           +I+V+VQLRLNKKW  IIL+CEWIL KSSF+PDVI +NLL+DAYGQ+  YK+ ES Y++L
Sbjct: 122 LINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAI---VYNAYIDGLVK- 298
           LES  +PTEDTYALL+KAYC +GL+E+AE V  EM+ + +SP  I   VYNAYI+GL+K 
Sbjct: 182 LESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241

Query: 299 GGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICT 358
            GN  +A+++F RMKRD C+P+T+TY ++IN+YGK SKS+M+ K++ EMR+ +CKPNICT
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301

Query: 359 FTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQ 418
           +TALVNA AREGLCEKAEEIFEQ+QE G EPDVY YNALMESYSRAG+PYGAAEIFSLMQ
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361

Query: 419 HMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAA 478
           HMGCEPDRASYNIMVDAYGRAGLH DA+AVFEEMKR+GI PTMKSHMLLLSAYS A +  
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421

Query: 479 KCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILI 538
           KCE I+ +M ++G++PDTFVLNSMLNLYGRLGQF KME +L+ M+ GP  ADISTYNILI
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481

Query: 539 NVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCY 598
           N+YG+AGF+ER+EELF  L  KN  PDVVTWTSRIGAYSRKKLY +CLE+FEEMID+GC 
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541

Query: 599 PDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDV 628
           PDGGTAKVLLSACSSEEQ+EQVT+V+RTMHK V
Sbjct: 542 PDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 574

[Close]
BLAST of Clc01G10090 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.3e-58
Identity = 124/459 (27.02%), Postives = 222/459 (48.37%), Query Frame = 0 

Query: 203 LNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 262
           L    + P  + YN L+  +G+  +Y +  S   E+ E+ C     TY  L+ AY ++G 
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366

Query: 263 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTM 322
            ++A  V   M K G+ P+AI Y   ID   K G   +A+++F+ MK  GC P+T TY  
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426

Query: 323 LINVYGKESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 382
           ++++ GK+S+S+  +K+  +M++  C PN  T+  ++     +G+ +    +F +M+  G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486

Query: 383 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 442
           +EPD   +N L+ +Y R G    A++++  M   G      +YN +++A  R G     +
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546

Query: 443 AVFEEMKRIGITPTMKSHMLLLSAYSNAGNAA---------------------------- 502
            V  +MK  G  PT  S+ L+L  Y+  GN                              
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606

Query: 503 -KCEDIIGQ------MHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADI 562
            KC  + G         K G KPD  + NSML+++ R   + + E +L ++++     D+
Sbjct: 607 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666

Query: 563 STYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEE 622
            TYN L+++Y R G   + EE+ + L    L+PD+V++ + I  + R+ L +  + +  E
Sbjct: 667 VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726

Query: 623 MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 627
           M + G  P   T    +S  ++     ++ +V+  M K+
Sbjct: 727 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765

[Close]
BLAST of Clc01G10090 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.2e-54
Identity = 123/458 (26.86%), Postives = 216/458 (47.16%), Query Frame = 0 

Query: 203 LNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 262
           +  + F  D + YN L+D YG+    K+      E++ +   P+  TY  L+ AY + G+
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364

Query: 263 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTM 322
           L++A  +  +M + G  P    Y   + G  + G    A+ IF  M+  GC+P+  T+  
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424

Query: 323 LINVYGKESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 382
            I +YG   K    +KIFDE+      P+I T+  L+    + G+  +   +F++M+ AG
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484

Query: 383 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 442
           + P+   +N L+ +YSR G    A  ++  M   G  PD ++YN ++ A  R G+ E ++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544

Query: 443 AVFEEMKRIGITPTMKSHMLLLSAYSNAGN-----------------------------A 502
            V  EM+     P   ++  LL AY+N                                 
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604

Query: 503 AKC------EDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADI 562
           +KC      E    ++ + G  PD   LNSM+++YGR     K   +L  M++  +   +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664

Query: 563 STYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEE 622
           +TYN L+ ++ R+    + EE+ + + AK ++PD++++ + I AY R    +    IF E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724

Query: 623 MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHK 626
           M ++G  PD  T    + + +++   E+   VVR M K
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762

[Close]
BLAST of Clc01G10090 vs. ExPASy Swiss-Prot
Match: Q9FMQ1 (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 6.6e-50
Identity = 126/436 (28.90%), Postives = 200/436 (45.87%), Query Frame = 0 

Query: 210 PDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 269
           P V IYN+L+D   +     D E  + E+L    +P+  TY  L+  YCK+G  EK+  V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 270 FAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGK 329
              M+   + PS I +N  + GL K G    A  +   MK  G  P   T+++L + Y  
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331

Query: 330 ESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYA 389
             K+  AL +++       K N  T + L+NAL +EG  EKAEEI  +    G  P+   
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391

Query: 390 YNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMK 449
           YN +++ Y R G   GA      M+  G +PD  +YN ++  +   G  E+A+    +MK
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451

Query: 450 RIGITPTMKSHMLLLSAYSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLN--------- 509
             G++P+++++ +L+  Y       KC DI+ +M  +G  P+     +++N         
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511

Query: 510 -------------------LYGRL----GQFGKMEDLL---STMQKGPYRADISTYNILI 569
                              +Y  L       GK+ED       M K     ++ TYN LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571

Query: 570 NVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCY 611
           +     G +   E+L   +  K L+PDV T+ S I  Y      +RC+ ++EEM  +G  
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631

[Close]
BLAST of Clc01G10090 vs. ExPASy Swiss-Prot
Match: Q9LW84 (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX=3702 GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.6e-48
Identity = 112/436 (25.69%), Postives = 209/436 (47.94%), Query Frame = 0 

Query: 172 TNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDV 231
           T+ST++ +I + +Q   ++K   +  +   + N+    PD I Y+ L+ +Y +       
Sbjct: 196 TSSTYNSVILMLMQEGQHEK---VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSA 255

Query: 232 ESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDG 291
              + E+ ++   PTE  Y  LL  Y K G +EKA  +F EM++ G SP+   Y   I G
Sbjct: 256 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG 315

Query: 292 LVKGGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPN 351
           L K G   +A   +  M RDG  P       L+N+ GK  +      +F EM   RC P 
Sbjct: 316 LGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPT 375

Query: 352 ICTFTALVNAL-AREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIF 411
           + ++  ++ AL   +    +    F++M+     P  + Y+ L++ Y +      A  + 
Sbjct: 376 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 435

Query: 412 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNA 471
             M   G  P  A+Y  +++A G+A  +E A  +F+E+K      + + + +++  +   
Sbjct: 436 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 495

Query: 472 GNAAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTY 531
           G  ++  D+  +M   G  PD +  N++++   + G   +   LL  M++   RADI+++
Sbjct: 496 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 555

Query: 532 NILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMID 591
           NI++N + R G   R  E+F+ +    ++PD VT+ + +G ++   +++    +  EM D
Sbjct: 556 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 615

Query: 592 AGCYPDGGTAKVLLSA 607
            G   D  T   +L A
Sbjct: 616 KGFEYDAITYSSILDA 628

[Close]
BLAST of Clc01G10090 vs. ExPASy TrEMBL
Match: A0A0A0M168 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701920 PE=4 SV=1)

HSP 1 Score: 1137.1 bits (2940), Expect = 0.0e+00
Identity = 551/575 (95.83%), Postives = 567/575 (98.61%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LISGSVVNNIYLQPRCCG+ ++WTVKCA++EVVEKSRRDGLYVDKRGK RTFNRKRLSRK
Sbjct: 2   LISGSVVNNIYLQPRCCGSNYRWTVKCANSEVVEKSRRDGLYVDKRGKFRTFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIM+FVREEVDYMGLWDSLD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMEFVREEVDYMGLWDSLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKWGPIILICEWI+NKS+FRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
           VKAVEIFHRMKRDGCQP+TDTYTMLINVYGKESKSHMA  IFDEMRTQRCKPNICTFTAL
Sbjct: 242 VKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC
Sbjct: 302 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYS+AGN AKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKMEDL STMQKGP RADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLE+FE+MIDAGCYPDGG
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSSEEQIEQVTNVVRTMHKD+KTLLP+
Sbjct: 542 TAKVLLSACSSEEQIEQVTNVVRTMHKDLKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. ExPASy TrEMBL
Match: A0A1S3CAG0 (pentatricopeptide repeat-containing protein At2g35130 OS=Cucumis melo OX=3656 GN=LOC103498259 PE=4 SV=1)

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 548/575 (95.30%), Postives = 563/575 (97.91%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LI GSVVNNIYLQP CCG+ F+ TVKC D+EVVEKSRRDGLYVDK+GK R+FNRKRLSRK
Sbjct: 2   LIFGSVVNNIYLQPGCCGSNFRCTVKCGDSEVVEKSRRDGLYVDKQGKFRSFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIM+F+REEVDYMGLWDSLD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMEFLREEVDYMGLWDSLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKWGPIILICEWILNKS+FRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWGPIILICEWILNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
           VKAVEIF RMKRDGCQP+TDTYTMLINVYGKESKSHMA+ IFDEMRTQRCKPNICTFTAL
Sbjct: 242 VKAVEIFQRMKRDGCQPATDTYTMLINVYGKESKSHMAMNIFDEMRTQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC
Sbjct: 302 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYS AGNAAKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSKAGNAAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQFGKMEDL STMQKGP RADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLE+FE+MIDAGCYPDGG
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLP+
Sbjct: 542 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. ExPASy TrEMBL
Match: A0A6J1KIY3 (pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita maxima OX=3661 GN=LOC111495654 PE=4 SV=1)

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 547/575 (95.13%), Postives = 562/575 (97.74%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LI GSVVNNIYLQPRCCG  F+WTVKCA+NEVVEKSRRDG+YVDKRGKLRTFNRKRLSRK
Sbjct: 2   LIFGSVVNNIYLQPRCCGTDFRWTVKCAENEVVEKSRRDGVYVDKRGKLRTFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGP AQQIMDFVREEVDYMGLWD LD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPTAQQIMDFVREEVDYMGLWDFLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKW PIILICEWILNKSSFRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWAPIILICEWILNKSSFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKA CKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKACCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
            KAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSH+ALKIFDEMR+QRCKPNICTFTAL
Sbjct: 242 GKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHVALKIFDEMRSQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNA AREGLCEKAEEIFEQ+QEAGYEPDVYAYNALMESYSRAG+PYGAAEIFSLMQHMGC
Sbjct: 302 VNAFAREGLCEKAEEIFEQLQEAGYEPDVYAYNALMESYSRAGYPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQ+VFEEM+RIG+TPTMKS MLLLSAYSNAGNAAKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQSVFEEMRRIGMTPTMKSFMLLLSAYSNAGNAAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQF KMEDLLSTMQKGPYRADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVVNSMLNLYGRLGQFEKMEDLLSTMQKGPYRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGF+ERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG
Sbjct: 482 RAGFLERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSS EQIEQVTNVVRT+HKDVKTLLP+
Sbjct: 542 TAKVLLSACSSVEQIEQVTNVVRTIHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. ExPASy TrEMBL
Match: A0A6J1CM30 (pentatricopeptide repeat-containing protein At2g35130 OS=Momordica charantia OX=3673 GN=LOC111012707 PE=4 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 543/576 (94.27%), Postives = 564/576 (97.92%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           +I GS +NN+YLQPRCCG+ F+WTVKCADNEVVEKSRRDGLYVDKRGKLRTF+RKRLSRK
Sbjct: 2   MIFGSALNNVYLQPRCCGSDFRWTVKCADNEVVEKSRRDGLYVDKRGKLRTFDRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGP+AQQIMDFVREEVDY GLWDSLD LP  NSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPIAQQIMDFVREEVDYTGLWDSLDTLPPNNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLN+KWGPIILICEWILNKSSFRPDVI+YNLLMDAYGQ+SLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNRKWGPIILICEWILNKSSFRPDVIVYNLLMDAYGQKSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
           VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMR+QRCKPNICTFTAL
Sbjct: 242 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRSQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNA AREGLCEKAEEIFEQ+QEAGYEPDVYAYNALME+YSRAGFPYGAAEIFSLMQHMGC
Sbjct: 302 VNAFAREGLCEKAEEIFEQLQEAGYEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQ+VFEEMKRIGITPTMKSHMLLLSA+SNAGNAAKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQSVFEEMKRIGITPTMKSHMLLLSAHSNAGNAAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKG-PYRADISTYNILINVY 538
           IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKME LLSTMQKG  +RADISTYNILINVY
Sbjct: 422 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEALLSTMQKGSSFRADISTYNILINVY 481

Query: 539 GRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDG 598
           GRAGF+ERMEELF LLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFE+MIDAGCYPDG
Sbjct: 482 GRAGFLERMEELFLLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEQMIDAGCYPDG 541

Query: 599 GTAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           GTAKVLLSACSSEEQIEQVTNV+RTMHKDVKT+LP+
Sbjct: 542 GTAKVLLSACSSEEQIEQVTNVIRTMHKDVKTVLPV 577

[Close]
BLAST of Clc01G10090 vs. ExPASy TrEMBL
Match: A0A6J1EGX6 (pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita moschata OX=3662 GN=LOC111433996 PE=4 SV=1)

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 543/575 (94.43%), Postives = 558/575 (97.04%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           LI GSVVNNIYLQPRCCG  F+WTVKCA+NEVVEKSRRDG YVD+RGKLRTFNRKRLSRK
Sbjct: 2   LIFGSVVNNIYLQPRCCGTDFRWTVKCAENEVVEKSRRDGAYVDRRGKLRTFNRKRLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVLGP AQQIMDFVREEVDYMGLW  LD LPATNSTWDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLGPTAQQIMDFVREEVDYMGLWHFLDTLPATNSTWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           IISVAVQLRLNKKW PIILICEWILNKSSFRPDVI+YNLLMDAYGQRSLYKDVESTYLEL
Sbjct: 122 IISVAVQLRLNKKWAPIILICEWILNKSSFRPDVIVYNLLMDAYGQRSLYKDVESTYLEL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNN 298
           LESHCIPTEDTYALLLKA CKSGLLEKAEAVFAEMRKYGL PSAIVYNAYIDGLVKGGNN
Sbjct: 182 LESHCIPTEDTYALLLKACCKSGLLEKAEAVFAEMRKYGLPPSAIVYNAYIDGLVKGGNN 241

Query: 299 VKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICTFTAL 358
            KAVEIFHRMKRDGCQPSTDTYTMLIN+YGKESKSHMALKIFDEMR+QRCKPNICTFTAL
Sbjct: 242 GKAVEIFHRMKRDGCQPSTDTYTMLINIYGKESKSHMALKIFDEMRSQRCKPNICTFTAL 301

Query: 359 VNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGC 418
           VNA AREGLCEKAEEIFEQ+QEAGYEPDVYAYNALMESYSRAG+PYGAAEIFSLMQHMGC
Sbjct: 302 VNAFAREGLCEKAEEIFEQLQEAGYEPDVYAYNALMESYSRAGYPYGAAEIFSLMQHMGC 361

Query: 419 EPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAAKCED 478
           EPDRASYNIMVDAYGRAGLHEDAQ+VFEEM+RIGITPTMKS MLLLSAYSNAGN AKCED
Sbjct: 362 EPDRASYNIMVDAYGRAGLHEDAQSVFEEMRRIGITPTMKSFMLLLSAYSNAGNTAKCED 421

Query: 479 IIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILINVYG 538
           IIGQMHKSGLKPDTFV+NSMLNLYGRLGQF KMEDLLSTMQKGPYRADISTYNILINVYG
Sbjct: 422 IIGQMHKSGLKPDTFVVNSMLNLYGRLGQFEKMEDLLSTMQKGPYRADISTYNILINVYG 481

Query: 539 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 598
           RAGF+ERMEELFQ+LPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG
Sbjct: 482 RAGFLERMEELFQMLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCYPDGG 541

Query: 599 TAKVLLSACSSEEQIEQVTNVVRTMHKDVKTLLPI 634
           TAKVLLSACSS EQIEQVTNVVRT+HKDVKTLLP+
Sbjct: 542 TAKVLLSACSSVEQIEQVTNVVRTIHKDVKTLLPV 576

[Close]
BLAST of Clc01G10090 vs. TAIR 10
Match: AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 820.5 bits (2118), Expect = 9.5e-238
Identity = 391/575 (68.00%), Postives = 481/575 (83.65%), Query Frame = 0 

Query: 57  LRLISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLS 116
           L L++G+ +N +++       Y  + V   +   V+  +++G  +D+RGKL+ FNRK+LS
Sbjct: 22  LWLVAGNALNCLFIDSSGFQRYLGFGVTNLNGATVKSYKQEGFVIDERGKLKRFNRKKLS 81

Query: 117 RKRCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTW 176
           RKRCGSLRGRGWKYGSGFVDGIFPVL P+AQ+I+ F+++E D   + D L  LP+T+++W
Sbjct: 82  RKRCGSLRGRGWKYGSGFVDGIFPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASW 141

Query: 177 DDIISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYL 236
           DD+I+V+VQLRLNKKW  IIL+CEWIL KSSF+PDVI +NLL+DAYGQ+  YK+ ES Y+
Sbjct: 142 DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV 201

Query: 237 ELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAI---VYNAYIDGLV 296
           +LLES  +PTEDTYALL+KAYC +GL+E+AE V  EM+ + +SP  I   VYNAYI+GL+
Sbjct: 202 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 261

Query: 297 K-GGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNI 356
           K  GN  +A+++F RMKRD C+P+T+TY ++IN+YGK SKS+M+ K++ EMR+ +CKPNI
Sbjct: 262 KRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 321

Query: 357 CTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSL 416
           CT+TALVNA AREGLCEKAEEIFEQ+QE G EPDVY YNALMESYSRAG+PYGAAEIFSL
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381

Query: 417 MQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGN 476
           MQHMGCEPDRASYNIMVDAYGRAGLH DA+AVFEEMKR+GI PTMKSHMLLLSAYS A +
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441

Query: 477 AAKCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNI 536
             KCE I+ +M ++G++PDTFVLNSMLNLYGRLGQF KME +L+ M+ GP  ADISTYNI
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501

Query: 537 LINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAG 596
           LIN+YG+AGF+ER+EELF  L  KN  PDVVTWTSRIGAYSRKKLY +CLE+FEEMID+G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561

Query: 597 CYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDV 628
           C PDGGTAKVLLSACSSEEQ+EQVT+V+RTMHK V
Sbjct: 562 CAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 596

[Close]
BLAST of Clc01G10090 vs. TAIR 10
Match: AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 820.1 bits (2117), Expect = 1.2e-237
Identity = 390/573 (68.06%), Postives = 480/573 (83.77%), Query Frame = 0 

Query: 59  LISGSVVNNIYLQPRCCGNYFKWTVKCADNEVVEKSRRDGLYVDKRGKLRTFNRKRLSRK 118
           L++G+ +N +++       Y  + V   +   V+  +++G  +D+RGKL+ FNRK+LSRK
Sbjct: 2   LVAGNALNCLFIDSSGFQRYLGFGVTNLNGATVKSYKQEGFVIDERGKLKRFNRKKLSRK 61

Query: 119 RCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIMDFVREEVDYMGLWDSLDMLPATNSTWDD 178
           RCGSLRGRGWKYGSGFVDGIFPVL P+AQ+I+ F+++E D   + D L  LP+T+++WDD
Sbjct: 62  RCGSLRGRGWKYGSGFVDGIFPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDD 121

Query: 179 IISVAVQLRLNKKWGPIILICEWILNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLEL 238
           +I+V+VQLRLNKKW  IIL+CEWIL KSSF+PDVI +NLL+DAYGQ+  YK+ ES Y++L
Sbjct: 122 LINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL 181

Query: 239 LESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAI---VYNAYIDGLVK- 298
           LES  +PTEDTYALL+KAYC +GL+E+AE V  EM+ + +SP  I   VYNAYI+GL+K 
Sbjct: 182 LESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241

Query: 299 GGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGKESKSHMALKIFDEMRTQRCKPNICT 358
            GN  +A+++F RMKRD C+P+T+TY ++IN+YGK SKS+M+ K++ EMR+ +CKPNICT
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301

Query: 359 FTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQ 418
           +TALVNA AREGLCEKAEEIFEQ+QE G EPDVY YNALMESYSRAG+PYGAAEIFSLMQ
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361

Query: 419 HMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSNAGNAA 478
           HMGCEPDRASYNIMVDAYGRAGLH DA+AVFEEMKR+GI PTMKSHMLLLSAYS A +  
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421

Query: 479 KCEDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADISTYNILI 538
           KCE I+ +M ++G++PDTFVLNSMLNLYGRLGQF KME +L+ M+ GP  ADISTYNILI
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481

Query: 539 NVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCY 598
           N+YG+AGF+ER+EELF  L  KN  PDVVTWTSRIGAYSRKKLY +CLE+FEEMID+GC 
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541

Query: 599 PDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDV 628
           PDGGTAKVLLSACSSEEQ+EQVT+V+RTMHK V
Sbjct: 542 PDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 574

[Close]
BLAST of Clc01G10090 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-59
Identity = 124/459 (27.02%), Postives = 222/459 (48.37%), Query Frame = 0 

Query: 203 LNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 262
           L    + P  + YN L+  +G+  +Y +  S   E+ E+ C     TY  L+ AY ++G 
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366

Query: 263 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTM 322
            ++A  V   M K G+ P+AI Y   ID   K G   +A+++F+ MK  GC P+T TY  
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426

Query: 323 LINVYGKESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 382
           ++++ GK+S+S+  +K+  +M++  C PN  T+  ++     +G+ +    +F +M+  G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486

Query: 383 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 442
           +EPD   +N L+ +Y R G    A++++  M   G      +YN +++A  R G     +
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546

Query: 443 AVFEEMKRIGITPTMKSHMLLLSAYSNAGNAA---------------------------- 502
            V  +MK  G  PT  S+ L+L  Y+  GN                              
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606

Query: 503 -KCEDIIGQ------MHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADI 562
            KC  + G         K G KPD  + NSML+++ R   + + E +L ++++     D+
Sbjct: 607 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666

Query: 563 STYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEE 622
            TYN L+++Y R G   + EE+ + L    L+PD+V++ + I  + R+ L +  + +  E
Sbjct: 667 VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726

Query: 623 MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 627
           M + G  P   T    +S  ++     ++ +V+  M K+
Sbjct: 727 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765

[Close]
BLAST of Clc01G10090 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-56
Identity = 123/458 (26.86%), Postives = 216/458 (47.16%), Query Frame = 0 

Query: 203 LNKSSFRPDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 262
           +  + F  D + YN L+D YG+    K+      E++ +   P+  TY  L+ AY + G+
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364

Query: 263 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTM 322
           L++A  +  +M + G  P    Y   + G  + G    A+ IF  M+  GC+P+  T+  
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424

Query: 323 LINVYGKESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 382
            I +YG   K    +KIFDE+      P+I T+  L+    + G+  +   +F++M+ AG
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484

Query: 383 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQ 442
           + P+   +N L+ +YSR G    A  ++  M   G  PD ++YN ++ A  R G+ E ++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544

Query: 443 AVFEEMKRIGITPTMKSHMLLLSAYSNAGN-----------------------------A 502
            V  EM+     P   ++  LL AY+N                                 
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604

Query: 503 AKC------EDIIGQMHKSGLKPDTFVLNSMLNLYGRLGQFGKMEDLLSTMQKGPYRADI 562
           +KC      E    ++ + G  PD   LNSM+++YGR     K   +L  M++  +   +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664

Query: 563 STYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEE 622
           +TYN L+ ++ R+    + EE+ + + AK ++PD++++ + I AY R    +    IF E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724

Query: 623 MIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHK 626
           M ++G  PD  T    + + +++   E+   VVR M K
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762

[Close]
BLAST of Clc01G10090 vs. TAIR 10
Match: AT5G12100.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 200.3 bits (508), Expect = 4.7e-51
Identity = 126/436 (28.90%), Postives = 200/436 (45.87%), Query Frame = 0 

Query: 210 PDVIIYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 269
           P V IYN+L+D   +     D E  + E+L    +P+  TY  L+  YCK+G  EK+  V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 270 FAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPSTDTYTMLINVYGK 329
              M+   + PS I +N  + GL K G    A  +   MK  G  P   T+++L + Y  
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331

Query: 330 ESKSHMALKIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYA 389
             K+  AL +++       K N  T + L+NAL +EG  EKAEEI  +    G  P+   
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391

Query: 390 YNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMK 449
           YN +++ Y R G   GA      M+  G +PD  +YN ++  +   G  E+A+    +MK
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451

Query: 450 RIGITPTMKSHMLLLSAYSNAGNAAKCEDIIGQMHKSGLKPDTFVLNSMLN--------- 509
             G++P+++++ +L+  Y       KC DI+ +M  +G  P+     +++N         
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511

Query: 510 -------------------LYGRL----GQFGKMEDLL---STMQKGPYRADISTYNILI 569
                              +Y  L       GK+ED       M K     ++ TYN LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571

Query: 570 NVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLEIFEEMIDAGCY 611
           +     G +   E+L   +  K L+PDV T+ S I  Y      +RC+ ++EEM  +G  
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631

The following BLAST results are available for this feature:
BLAST of Clc01G10090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895421.10.0e+0097.38pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Benincasa hisp... [more]
XP_004145440.10.0e+0095.83pentatricopeptide repeat-containing protein At2g35130 [Cucumis sativus] >KGN6686... [more]
XP_023520351.10.0e+0095.48pentatricopeptide repeat-containing protein At2g35130 [Cucurbita pepo subsp. pep... [more]
XP_008459028.10.0e+0095.30PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Cucumis melo][more]
XP_023001551.10.0e+0095.13pentatricopeptide repeat-containing protein At2g35130 [Cucurbita maxima][more]
BLAST of Clc01G10090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O821781.8e-23668.06Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... [more]
O646242.3e-5827.02Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
Q9LYZ91.2e-5426.86Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9FMQ16.6e-5028.90Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
Q9LW843.6e-4825.69Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX... [more]
BLAST of Clc01G10090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1680.0e+0095.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701920 PE=4 SV=1[more]
A0A1S3CAG00.0e+0095.30pentatricopeptide repeat-containing protein At2g35130 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1KIY30.0e+0095.13pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita maxima OX=366... [more]
A0A6J1CM300.0e+0094.27pentatricopeptide repeat-containing protein At2g35130 OS=Momordica charantia OX=... [more]
A0A6J1EGX60.0e+0094.43pentatricopeptide repeat-containing protein At2g35130 OS=Cucurbita moschata OX=3... [more]
BLAST of Clc01G10090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G35130.29.5e-23868.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G35130.11.2e-23768.06Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G18940.11.6e-5927.02Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.18.2e-5626.86Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G12100.14.7e-5128.90pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 560..608
e-value: 2.5E-8
score: 34.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 424..456
e-value: 1.9E-6
score: 25.7
coord: 319..352
e-value: 5.2E-9
score: 33.7
coord: 214..246
e-value: 0.001
score: 17.1
coord: 529..562
e-value: 1.8E-7
score: 28.9
coord: 462..492
e-value: 1.0E-4
score: 20.3
coord: 388..421
e-value: 4.0E-7
score: 27.8
coord: 249..281
e-value: 3.7E-9
score: 34.2
coord: 563..596
e-value: 5.0E-7
score: 27.5
coord: 353..387
e-value: 4.9E-9
score: 33.8
coord: 283..316
e-value: 2.4E-7
score: 28.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 528..555
e-value: 2.1E-5
score: 24.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 269..330
e-value: 8.0E-13
score: 48.3
coord: 374..433
e-value: 7.4E-11
score: 42.0
coord: 332..362
e-value: 6.0E-7
score: 29.4
coord: 205..258
e-value: 6.9E-5
score: 22.8
coord: 444..503
e-value: 2.5E-7
score: 30.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 386..420
score: 11.8273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 561..595
score: 11.443655
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..490
score: 8.977363
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..315
score: 11.629997
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 246..280
score: 13.109773
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..245
score: 9.328124
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..385
score: 12.649398
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 316..350
score: 11.125777
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 491..525
score: 8.659485
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 526..560
score: 11.520384
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 13.504379
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 405..521
e-value: 3.2E-30
score: 107.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 522..631
e-value: 2.8E-24
score: 88.1
coord: 298..404
e-value: 2.8E-34
score: 120.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 171..297
e-value: 2.8E-25
score: 90.7
NoneNo IPR availablePANTHERPTHR47942:SF47PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 112..631
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 112..631

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G10090.2Clc01G10090.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding