Clc01G09870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G09870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AAI domain-containing protein
Location	ClcChr01: 11515171 .. 11519225 (-)
RNA-Seq Expression	Clc01G09870
Synteny	Clc01G09870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAATGTGTAAAAGTAGTTGGCTGGCTTGTATTTGGAGTGGGAAAATGGCTAAGTGTAAGCTATGCGTTGATGGCAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTAAGGGAAGCTTATCATGCGCTGAAGTTGAGACGCGTTGAGGACATAAGGCGTGGAGGATCACTTGGTATCGAGGATCATTATGCGTCAAACGCATTGAAGGCAGTGTGCCGTTGGAAGTAAAGGCCACGAGGAGTTGGGAGCTGATCTGCGGTGAGGCTATTATGTGGTGAACGCTACCATGCGTCGAAGGCGGGTATGCGTTGGACAAAGAGTGTTGGCCGAGAGAAAGTTATGCGTATGCTAACTATTTGGTGGGAGAGTTTGAAAAGAATTATCATCAGAGGCTGTGTGCGTTGCTGAAGCTAAGCATAGGAGGTATGCGTTGAACGGATTATAGTATAGAGTTGAAATGAAGGACAAGTCGGTGGTATATATATAAGTGGACTGAGAAATCAATTGTTCTGCTTGCATTTCAGAGCTCGAGTTGGGTCCATATTAAGGCGAAACATCGGAGGAAGGTAGAAGAAGATGTTCATGCTGATCTGAAGCAGAAATCTCATTGAATTCGTGGAATAAACTTGGGGTTGACAAAGGTTTCGACTTCTGTTATCTCTTCAGAGTGATGCTCGATTTTGGAGGAAGAACAAATTGAAGAGACGAAGGTTAGGGCTGAAACTTTGAGGTTAGTAAGTTAACTCGATTTCTAGCAGGTTTCATGAAGGATGCTTGAGCTGAAATTGTTTAATTGTGTGTCAAACTCAGGAAGAAGAGACGGGAGTTGAACTGTCGGATGATTAGAGGTAACTTGGAGTTGTCGAAGGAGATGTCCTAAACGAAGAGGATGTTCTTCATGAAATTTGGAGGTAAGATGAAGGACTTGTATTTTAACAAGTTTGTAGAAGGAAGGAAGTACTGAAATTGATTGAAATGGAATGTTTAGCAGGTTGAAGAAGGAAGAAGAAAGGAAGAAGGAAACGGTTCTACAGCAGCGGAAGTATCGCTGAGTGAGCGAGAGACTGGGCAGCGAAACAAGTAACGCTGCAACGCAAAGATAGGCTTTGCGTCTCACAATTCTCGCTAGAGTATCGCTGGGTATCGCTCCTCAAGGTAGACTCGCTGGTTTTAATCAACGTAGTGTCGCTAGTACAGTTTAAGTATCTTTTGAGTAACGCTGGTAGCTTACAATTTTCTATAGAGTAACGATGCTATTGTATGCTAAAGGAAAAGGGAGATTATGGAAACTAAACTTGAGGATTTTGTATTTTCAGGCCAAGAAGAGCTCGTGGAGGCTTATAACCCACTTAGAGCCGGGACCAATTGTGAGTGACTGTTTGTTATACCTTGTGTTAAACTTAGTACGCATATTGATAAGGAAACGTGATTCATGGTAGTATGCCTTATGTATGTGATGTGTTAGTGATTTAAGAGTATATTATTACAAATGTCTAAGCACATAAGTGGTTGAGGGACCTTATGGTGAAAGCTACATGTGAGTAAGTTTGAAATTAAGTGCTGAGGGATTTGAGAAGGCACTTGGATAACAGTAGAAAAATGGACTACAATGCTCAGGGACTGTAAGTGAGGGCATGTAGTAATCCATTACACACTAGCTCGTGCCGAGGGATCATGAGTGAAGGCACTAGAGCATAAGATAGAGCTTGTTACCTGTGCCGAGGGATTTTAGGTGAAGGCACATGGTACTGTAATTATAAATGAGTAAGTGCTGAGGGACGGAAAGTGAAAGCACTAAATAGATGAAAGCTTGTGAGACATGAGAATTAATAGTTATACATGCATAGTGGAAAGTGAATCTTGATAATTCATTAGGATGTGTTATGCGATGGTTACTATCTTACAAACTGGATTAAAGTTGTTATGAGTAGTTTTAGTAGATTTAGTCACTCACTGAGCCTTTTGCTCATCCAGTTTGTTGTTGTTGTTATTTCAGGTAGCGAGCGTATCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGGCCTATCTGGAAGTGAACCTCTGGGATAGTTGTAAATACTTAGTTTGTTCGTATATCTTGTAATGAACATATTTCATGAGGGTAGAGAGGGAGACGTGTTGTACTTTATATGTGTATATACAAACATGTTGGTTGAAAGTTTGCACATTCATCTAATGAGATTATGGGATTGTTTTTTGTTTTGCTATTATTTTATGGTGTTTATCTTATAAAGTCTTATGTTCGGAAATAGGATCATGCTCCTTCCTAGGTATAGAGTAAATCTGGGTTGGGGTGTGACACCTAGCCTACAGGAGATCCTCGTCTGGGTTTATTTTGGACTAGTCCTCTGGGATAGTTATAAATACACAGTATATGTACATGCTTCATTTTGTTAAACATGTTCTTTGGGATTGTAGTGGGTTTTGTTTCTTAATGTATATAGAGAACACTTATCTTGTTGAGTCTTATTATTCTATGAGATCGTATTGCATATAGAAAAGATTGAATGAACAGTAGTGGATTGTTAGATAGTTACTTTAGAATACAGGTGTGTGCTGGTTCGCACTCACTCCTCAAGTAGTAAGGGTAATCTAGGAGGGGGTGTGACATTAGATCTCTTTCAACACTTCACAACATAACTTTATTCCTTTCTTGCTTATGCGTCTTACCAACGCCAATGCTTACATCTTTTCCTATGCGTTTCACTTCTTTCCCTTCTCGATCTACTTCCATGCGTCCACCCTTACCATGCGTTACCTAGCCCTGACCATGCGTCTAACATGGTCTTTTACTTCTTTTCTTCATAGACTCTTCAACGCATCGTTTTCTTAAGGTGTAAGATACCCTGCTGGCACTTTAAATGGAAGTATATAAAAAATTACTCACATTATTATTGCCCCAGCTAACCTCGAAACTGCTTTCTATTGTTGCCTTTTTCAATTTTATATTAAGTTATGTTTAGATTATGCAGATAAATTACTCAAACATGGCATCCATCCATCTTTCGTACCTTGTTGTCATTCTTTTTGTATTTTTATCAATTTAACTTCACAATACTTTACATGCCACCTTGGACATGTACACACGACATCAATTTTGTGGTACTTTCGGAACTACTGACCTTGTATCGTGGGATAAACTATATGCATGCATAGCACCTAATCGTCTACGCTTAGTTTAAATGTTTATATAATTTTCTTTCTATTGATCATATCAATCATTTAAAACAAAGAAATTGATAATTTTTATAAGACTTATGTAAAATGTCTATTTCCTGAAAATAATGATTAATTTCTGTGTTGTCATACATACAATTATATTACCATTCAACATTCTTTGCTCGAAACAATAGCAATTGAACGCTCTCTAATTGTCAAGCATCGAGTAGGAGATGATTCAAAGGCAATAGTTATAAACAAAGGTCAAATTCTAAACTGATGTATTTGTGAGGGTTGTAACCCCCAATACTAAACTCTAAACTAACTTAACCAAAATATTACTTAAGTTAGATTTAAATCTAACTAACTTCTAACAATTAACAAGTAAACTAGAACAACTCCACCTTAAGAATAAATCAAATTTATATAACTAACTAAACTACTTTAACAAATGTGTTTTTTCTTTAACAACACCTATGCAAATTGACGAGCCTATATAAAACATTGTTGATATCTTTAGCAAACATAGTCAAACTCCTTCTTCCTTAGCGTCATTCACATGCGAGTGTCGTTCCAAATATATTAGAATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGTGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTTGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGTTATTGTGGGTACGAGAAAAATCCAAAGATGATCATTACACATTCTCTTTCTTCATACCTGTTTCACCCTCATGTTTAA

mRNA sequence

ATGGGTGAATGTGTAAAAGTAGTTGGCTGGCTTGTATTTGGAGTGGGAAAATGGCTAAGTGTAAGCTATGCGTTGATGGCAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTAAGGGAAGCTTATCATGCGCTGAAGTTGAGACGCGTTGAGGACATAAGGCGTGGAGGATCACTTGGTATCGAGGATCATTATGCGTCAAACGCATTGAAGGCAGTGTGCCGTTGGAAAGCTCGAGTTGGGTCCATATTAAGGCGAAACATCGGAGGAAGGTTTCGACTTCTGTTATCTCTTCAGAGTGATGCTCGATTTTGGAGGAAGAACAAATTGAAGAGACGAAGGAAGAAGAGACGGGAGTTGAACTGTCGGATGATTAGAGCGAAACAAGTAACGCTGCAACGCAAAGATAGGCTTTGCGTCTCACAATTCTCGCTAGAGTATCGCTGGGTATCGCTCCTCAAGGCCAAGAAGAGCTCGTGGAGGCTTATAACCCACTTAGAGCCGGGACCAATTGTAGCGAGCGTATCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGGCCTATCTGGAAGTGAACCTCTGGGATAGTTGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGTGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTTGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGTTATTGTGGGTACGAGAAAAATCCAAAGATGATCATTACACATTCTCTTTCTTCATACCTGTTTCACCCTCATGTTTAA

Coding sequence (CDS)

ATGGGTGAATGTGTAAAAGTAGTTGGCTGGCTTGTATTTGGAGTGGGAAAATGGCTAAGTGTAAGCTATGCGTTGATGGCAACCTGTTGTGGAGGAAATAATTTTGGTGTAAACGCAAAGGTAAGGGAAGCTTATCATGCGCTGAAGTTGAGACGCGTTGAGGACATAAGGCGTGGAGGATCACTTGGTATCGAGGATCATTATGCGTCAAACGCATTGAAGGCAGTGTGCCGTTGGAAAGCTCGAGTTGGGTCCATATTAAGGCGAAACATCGGAGGAAGGTTTCGACTTCTGTTATCTCTTCAGAGTGATGCTCGATTTTGGAGGAAGAACAAATTGAAGAGACGAAGGAAGAAGAGACGGGAGTTGAACTGTCGGATGATTAGAGCGAAACAAGTAACGCTGCAACGCAAAGATAGGCTTTGCGTCTCACAATTCTCGCTAGAGTATCGCTGGGTATCGCTCCTCAAGGCCAAGAAGAGCTCGTGGAGGCTTATAACCCACTTAGAGCCGGGACCAATTGTAGCGAGCGTATCCGGGACGCCTAGCCTACTGAAGAATCTCGTCTGGGCCTATCTGGAAGTGAACCTCTGGGATAGTTGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGTGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTTGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGTTATTGTGGGTACGAGAAAAATCCAAAGATGATCATTACACATTCTCTTTCTTCATACCTGTTTCACCCTCATGTTTAA

Protein sequence

MGECVKVVGWLVFGVGKWLSVSYALMATCCGGNNFGVNAKVREAYHALKLRRVEDIRRGGSLGIEDHYASNALKAVCRWKARVGSILRRNIGGRFRLLLSLQSDARFWRKNKLKRRRKKRRELNCRMIRAKQVTLQRKDRLCVSQFSLEYRWVSLLKAKKSSWRLITHLEPGPIVASVSGTPSLLKNLVWAYLEVNLWDSCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKNPKMIITHSLSSYLFHPHV

Homology

[Close]

BLAST of Clc01G09870 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 7.5e-11
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 206 VLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKNPK 265
           + ++ VV NETQ+ +AVKC+  ELRPC  ++TM +EPSSACC KV + + CYC Y KNPK
Sbjct: 4   IWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPK 63

[Close]

BLAST of Clc01G09870 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida])

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-09
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 196 NLWDSCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQ 255
           NL  + + LLV+ M+ +    +L EAV C   EL PC+ A+T    PS+ACC+K+KEQ+ 
Sbjct: 3   NLSFTSLHLLVVAMAALLTGARLAEAVTCSTMELSPCIGAFTSTAPPSAACCSKLKEQQP 62

Query: 256 CYCGYEKNPKM 267
           C+CGY KNPK+
Sbjct: 63  CFCGYIKNPKL 73

[Close]

BLAST of Clc01G09870 vs. NCBI nr
Match: KAF7130843.1 (hypothetical protein RHSIM_Rhsim10G0072400 [Rhododendron simsii])

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-09
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S +C LV+V+ V+A E ++ EAV C A EL PCL A+T    PS+ACCNK++EQ+ C CG
Sbjct: 41  SLLCALVVVLVVLA-EARVTEAVTCNALELGPCLGAFTSSQAPSAACCNKLREQRPCLCG 100

Query: 260 YEKNPKMIITHSLSSYLFHPH 281
           Y KNP      S S Y+  P+
Sbjct: 101 YIKNP------SYSKYVNSPN 114

[Close]

BLAST of Clc01G09870 vs. NCBI nr
Match: KAG5527988.1 (hypothetical protein RHGRI_028801 [Rhododendron griersonianum])

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-09
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S +C LV+V+ V+A E ++ EAV C A EL PCL A+T    PS+ACCNK++EQ+ C CG
Sbjct: 8   SLLCALVVVLVVLA-EARVTEAVTCNALELGPCLGAFTSSQAPSAACCNKLREQRPCLCG 67

Query: 260 YEKNPKMIITHSLSSYLFHPH 281
           Y KNP      S S Y+  P+
Sbjct: 68  YIKNP------SYSKYVNSPN 81

[Close]

BLAST of Clc01G09870 vs. NCBI nr
Match: KAG5527978.1 (hypothetical protein RHGRI_028792 [Rhododendron griersonianum])

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-09
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S +C LV+V+ V+A E ++ EAV C   ELRPCL A+T    PS+ CC+KV+EQK C CG
Sbjct: 14  SLLCALVVVVVVLA-EARVTEAVTCNPLELRPCLGAFTSGQPPSAGCCDKVREQKPCLCG 73

Query: 260 YEKNPKM 267
           Y KNP +
Sbjct: 74  YIKNPNL 79

[Close]

BLAST of Clc01G09870 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.7e-08
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 224 CEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKNPKM 267
           C A +L PCL A T    PS+ACCNK+KEQK C CGY K+P +
Sbjct: 3   CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNL 45

[Close]

BLAST of Clc01G09870 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06
Identity = 27/67 (40.30%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S +C +V+V   + +   + EAV C   EL  C+ A T   +PSS CC+K+K Q+ C C 
Sbjct: 10  SVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLCN 69

Query: 260 YEKNPKM 267
           Y KNP +
Sbjct: 70  YIKNPSL 76

[Close]

BLAST of Clc01G09870 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-11
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 206 VLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKNPK 265
           + ++ VV NETQ+ +AVKC+  ELRPC  ++TM +EPSSACC KV + + CYC Y KNPK
Sbjct: 4   IWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPK 63

[Close]

BLAST of Clc01G09870 vs. ExPASy TrEMBL
Match: A0A6A4L2T0 (AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18628 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-09
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S +C LV+V+ V+A E ++ EAV C   ELRPCL A+T    PS+ CC+KV+EQK C CG
Sbjct: 8   SLLCALVVVVVVLA-EARVTEAVTCNPLELRPCLGAFTSGQPPSAGCCDKVREQKPCLCG 67

Query: 260 YEKNPKM 267
           Y KNP +
Sbjct: 68  YIKNPNL 73

[Close]

BLAST of Clc01G09870 vs. ExPASy TrEMBL
Match: A0A6A4L177 (AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18627 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-09
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S +C LV+V+ V+A E ++ EAV C   ELRPCL A+T    PS+ CC+KV+EQK C CG
Sbjct: 8   SLLCALVVVVVVLA-EARVTEAVTCNPLELRPCLGAFTSGQPPSAGCCDKVREQKPCLCG 67

Query: 260 YEKNPKM 267
           Y KNP +
Sbjct: 68  YIKNPNL 73

[Close]

BLAST of Clc01G09870 vs. ExPASy TrEMBL
Match: A0A6P6A4M9 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306315 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-09
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 203 CLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEK 262
           C + LV+ + + ET+  EAV C+A +L PCL A T    PS+ CC+K+KEQ+ C+CGY K
Sbjct: 13  CAVALVVLLFSGETRTAEAVTCDASQLSPCLAAITSSKPPSATCCSKLKEQQPCFCGYLK 72

Query: 263 NPKM 267
           NP +
Sbjct: 73  NPTL 76

[Close]

BLAST of Clc01G09870 vs. ExPASy TrEMBL
Match: A0A2P5WMT0 (AAI domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G197200v1 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.5e-09
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 202 MCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVE-PSSACCNKVKEQKQCYCGY 261
           +C++ L + V + ET +VEAV C   EL PCL A TM  + PS+ACC+K+KEQ+ C+CGY
Sbjct: 9   LCVVALAVVVFSGETCMVEAVTCNPIELSPCLAAITMPSQPPSAACCSKLKEQQPCFCGY 68

Query: 262 EKNPKMIITHSLSSYLFHPHV 282
            K+P      +L  Y+ +P++
Sbjct: 69  IKDP------TLKQYMNNPNI 83

[Close]

BLAST of Clc01G09870 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-08
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 222 VKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKNP 265
           V C+A++L+PCL A T   +PS ACC K+ EQ+ C CG+ KNP
Sbjct: 35  VTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNP 77

[Close]

BLAST of Clc01G09870 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           +C  LL+L   +VA E ++     C   +L PCL       EPS  CC+KVKEQ+ C C 
Sbjct: 12  TCTILLIL---IVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQ 71

Query: 260 YEKNP 265
           Y KNP
Sbjct: 72  YLKNP 73

[Close]

BLAST of Clc01G09870 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-07
Identity = 26/67 (38.81%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 200 SCMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCG 259
           S   L  +++ ++A      EAV C   +L PC  A T    PS+ CC K+KEQ+ C CG
Sbjct: 10  SLFALAAVLLMILA---PAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCG 69

Query: 260 YEKNPKM 267
           Y +NP +
Sbjct: 70  YMRNPSL 73

[Close]

BLAST of Clc01G09870 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-07
Identity = 23/63 (36.51%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 204 LLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKN 263
           +L L  +++     + E V C   +L  C  A T    PS ACC K++EQ+ C CGY +N
Sbjct: 9   VLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGYMRN 68

Query: 264 PKM 267
           P +
Sbjct: 69  PTL 71

[Close]

BLAST of Clc01G09870 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 4.5e-06
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 222 VKCEAKELRPCLFAYTMLVEPSSACCNKVKEQKQCYCGYEKNPK 266
           V C   EL+PCL +     +PS+ CC K+KEQ  C+C Y +NP+
Sbjct: 33  VACTVTELQPCLPSVIDGSQPSTQCCEKLKEQNSCFCDYLQNPQ 76

The following BLAST results are available for this feature:

BLAST of Clc01G09870 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66906.1	7.5e-11	56.67	hypothetical protein Csa_006987 [Cucumis sativus]	[more]
XP_038904866.1	1.1e-09	47.89	non-specific lipid-transfer protein 2-like [Benincasa hispida]	[more]
KAF7130843.1	1.8e-09	49.38	hypothetical protein RHSIM_Rhsim10G0072400 [Rhododendron simsii]	[more]
KAG5527988.1	1.8e-09	49.38	hypothetical protein RHGRI_028801 [Rhododendron griersonianum]	[more]
KAG5527978.1	4.1e-09	53.73	hypothetical protein RHGRI_028792 [Rhododendron griersonianum]	[more]

BLAST of Clc01G09870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P86809	4.7e-08	58.14	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
Q43681	2.0e-06	40.30	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]

BLAST of Clc01G09870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3W7	3.6e-11	56.67	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV...	[more]
A0A6A4L2T0	2.0e-09	53.73	AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921...	[more]
A0A6A4L177	2.0e-09	53.73	AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921...	[more]
A0A6P6A4M9	4.4e-09	48.44	non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC11...	[more]
A0A2P5WMT0	7.5e-09	44.44	AAI domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A03G19720...	[more]

BLAST of Clc01G09870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66850.1	3.7e-08	53.49	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	6.3e-08	43.08	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G18280.1	4.1e-07	38.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	5.3e-07	36.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G43667.1	4.5e-06	45.45	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 222..277 e-value: 6.9E-11 score: 44.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 223..271
None	No IPR available	PANTHER	PTHR33214:SF44	LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATED	coord: 201..266
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 201..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G09870.1	Clc01G09870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport