Clc01G09550 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G09550
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	TLC domain-containing protein
Location	ClcChr01: 10747921 .. 10754213 (+)
RNA-Seq Expression	Clc01G09550
Synteny	Clc01G09550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGATATTTTAAGTTTGTTTATATTAGGGAAAAAAATAATTGATGAAAGATTCTTTTGCAGTGTCATTGATGGAACACAACTAAGAGTTGAGTATAATTAAATATTTCCTCAATCCTACACCGACTAATTTTCAACGAGACTCAATTTTTATATGTAATTCACAATGCACATTGAAGAATGTAATAAATAAAAGAGAGATTAAAAAAAAGAAAAAAAGAAAGGAAAAATCATGGGCTAAGGCGCGAAGCTATCATATTCCTTCGGTTAGTACTACAGAAAGGATTGGATAGAATGCAATTGAATCCACAAGAACAAGAGGATCCCATCTCTGGAAACTCAAATCCATTGCTAATTAGCAAAACCCACTTGCATTTCGCATTACCCAATTCCCCATACGCTATTATAATTTCTAATTTCTCTTCATCATGCCTTGATTTACCCCTTTTAGATTGTTGCGTTGCGGTTGAAGATTCCTAACGCTTCACATTGATTGAACCTCACGGTTCTTTTGTACCGGTCGGTTGTTGCATTTCCTTTACAGATTATCTTATATTGTTTTCTTCCCATTTTCTTATCTTTGAAAAAGAGAAAAACCCCCCCTTCTGCATCTCCTCGTGATCTGGGGTCTTCATCTATTATGAGGTATTGCTTTTATCTTTTATTTGTTTTGGCGGTCATTTCCCTCTTTTCTTCCGTTTTTCTGGGTTACCCATCTGCATTTTGATCCTTTATTTTGATGGGATCTTTTAGTTTGTTCTTTCTATACTCGTGAATTTGTGTGCTTGCTGTAAGTCCCACCATCCGATCTTTAAGCTTACCTGATTATAAGCTTTTTTAGCGTTTTGGGGTTTTGTTCTAGAAATCGCTCCCTCCTTCAGTTTGTTTAAATTCAATGAGTGAGCATCATTTCTCTTTTACGCAGTCTTCTTGTGTTCTGTTCCAGCAATTCTGCCTTACTGGAATATTTGATCTTTTTTGTGTTGTTGGATTGTTCATTTTGTTTTTTGTTTTTTTTTTTTTTTCTAGTTTGCTGTTTCTTATTGGTTTCTGTTCAAGTCTTTATATTTGAGTTTGTATTAGTGTAGATCGTCGGGATGATCATGAAAGTTGAAGGCTACTTGAATACAGTGACAGCTACTGCTTTAGATAAACATATATGAAAATAATAAATGGGATGTACTGTTTGTCAAAGTGACCATAAATGGTCCATATGGTCACGATGCTGACTTTGTAGATGATTTTAGGGTGACATTTTTTTGACATTGCACAATCTAATGTCTCATAGAGTTTTCTACACATAGTTGTATAATTAAATATTTTTATGATAGATCCAACTAAATATTTCTATGTTAGATCTAGCCTGGGGGCATTTAATTTTTGATCCCATAAGAAAAAAGAAAGACTATGGAACCAGTTTAGCTAAATGATTCCTTCGCTTTTTTGTGCGAAGTTCAGATTGAATACGTAGCAAAGTTTTATGAGATGGAATAAGGAGTGGACTAGATTTTGGATGTTATGTTATTGTCCTCTGCTTGTGGACACTGATTTCTTATGCACAAATGTTTTTGTCACTATACTTTATATCTCTTTCTTACTAACTTCTTCATATTTGGTGAAGAAGGGATAACAATATGGAGGGAGGGAGCAAATAGTTAATTCAGTCTGAGGTACTGCGATCTGCCGAATGTTATGTAGTCAAACAACACAATGGCAATGTCTTTGAAGACTGTAATGGCTATTAAATCTTACCAAAGTCAAGCTGATGCATTAGTAAAGAACTATTTATTAGCAGACCGTTTTGTCCCATACACTTCTGTCCTTGGAGGCATGCTTGCTTGTAAATTGGTATGTGGCATCTTCTTACCTCATGCTGGATATAAGAAGGAAACAATGCTGCCCATATTTAATGCTTTTCTTCATATAGGTTCCAGTTCCTTACCATATGCTCTTTCCAATGTCTTATTTTTCCTCCTGCAGATTTATGATCTTACTCAATTAGTTAGCAATTTTTACATCAAGAGTTATCTGGGTCTTACAAAAATCCAACGAGTCGAGTGGAATAACCGGTGAGTCCATATCTTTAATTGTCCATTTCCTCTATAATATATTTAGTGGACTGTTGTGGCCATTACTGATATTCAAACTAAAATTGACAGCGGCATGTCCACTATTCATGCAATCTATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATGCTGGCCTTGTTACCTTCCAAAGTTCAACGTTGTCTACTTTCATATTGGGGGTAAGCTTTCTATTAGCTAATCTTAAATGAATGTCAGCTGCCTTTTAAAATTTCTTATTGCAAGTTTCCCTCTACATCCAGTAGTTAGCCTTTAACCATTTTATCCACCCATAACAGAACTAATAACTTCTGGTGTAATCAACTAATTATTTAACAACAGTTTTTTCCCTATCAATATTTATTTTCACCTCGAGGACAAGATAAAAATAAAATTCAGGAAATCGAGCCCATATTTTTTGTCGTTGTTTTTTCTAATGTTTCCCATGTTCATTGATTCTTTGAACGGACATGAACTTCAGTTTTACCAGTGGTAGCCAAAAGAAAAGGTCATTCTCCAGGGACTATCTCAGGCTGGAAAGACTATTTGAAGTTTTGACTTGGTTCGTTTGCAAGGTCTTGGAAATTTGGGCTATCCCAGTGACTACTTGGAGTCTGGAAACACATAATACTGGATGAATAGAAGTTGTTTCAGATAACTGAAGTTGATGAACAGCATGTAAACAGTGAACAATAAGGAATACTGCCAAAATGTTCTGGGCCCAACTTCTTCTTGTGTGTTGCTTAAGAAAACTAATGGTAAGGCCATATGTCAGAAGAAGTACCAATGTTAAACTCAACACCCTTCATTTGCCATTAGCAGTTTTCATCTATTGTGAGGCATGTATTAAGTTATCCAAAAATGTAGTTCTCCATAACTAAGAGCTTATCAATACTGAGCAAGGGGTGGGTTGTGATAATGTAGAAAAGGTGGAGGCGGCCAATCATGCACAACCTGGAAGACCGTTAGTTTTCCAGGGAACTGAAAGGTGTTATTATCAAAAGTTAGCGCATGCTATCCAGTTCAACCATGCTATTCAATATAGCATTAGCAAGGCAATGCCAACAGGTTGCAAAACAATGATTTAGGACGTGTTGTCTAATGGAATGAAGACGAGATTTGGATCTTTGTTCAACACTGTTCCTTTTAATAAGAAAAATAGTAATTGACAAAAAAGGGAAAAAGAAGAAAAAATTTATCTGTATTAGAATTAGTTGAATGAAGGAACCTGTGTAATCCAACATGAGATGGCCATATTTGGACAGACATTTGCAACAATGAGATGTTTATGCCCATCATATTTTGGGTAATCATCAAATGAAATGTACCGTCATGTTCTCCCAAACACTTATAGGTAGAGAAATTGGTCGCAGCAAGTAGGCAGGAGATGTTGCCAAGTATTTCTATAGCTGGAGTCTTGTAGCTACAGAATATAATTGCATCTCTATGATTCTGCTCTCCCTTCCATGCTTCAACTCTTTTCCATTCCCAGGATCAGTAGTTCTAATGCCCTAGTTGATGGGTTAGGACAAATTCGACATCAACAAGGCTTTACTGAGCAATGGTTCAAGCACTAGACTGTCAAGAAGCTTGCTACCACCTCCCTTATTATTCCGTATTTTCCCGTTCACGTTATAGCCCATTTTCTTCTGTGTTGTTTAAAAGCCTCACTACTGGATAGATAGGTTACAATCATAATAAATTGGCAGTAACTGTGGTATTGATTATGCTGATAAGTAGCTAACAGCTATTTGGTATTACAAGGTGCCCGAAATTTCCAGAATAGGAAGTAATTTCTAAATCATCATTGTGAAATAAAGACCACAAAACACCTTAGGCTTCCTAGGAAACTCGCACTCCAAATCAAAAGGTTAGCATTAGCTCATCAAGAGAGAGGTGCAGCGTACTGTTATGGGGTTAGAGTTCTGCACAGTGGCATTCATCCGTGCGGCACCTCAAACACCCCCTTCCTGAGGTAAGCCTTCCATCGTAGCCTTGAGTTAGACTGGTTTCGCCCTCCCATGGGCTCATCAGGGTGCTAAGGTGATATGCCCATCCTTCCTGGTCAAGTCCTAGACCAGCGATAAGCTCCCCAACTTACTCGGGTCAGCTTGCCTAACTCAGGAATAGACATACACCTCTAGCACATACCTTGCCTCATTGCTACCCCACATACCCCATCGAGTGTCTCTTGAGCTAACCAGCCTACTCTTGTCTTGCCACGCATGTCACGATCTTTGATACGTGATAGTACGCTCTTCTATTTGTCTGCTAGCCACACTCTTTGAGTCTTCAATATGAAAGAAAAACCACATAAATCTTTAAGGAGACTCCAACCATTCAGCCACTCTTCAAGATTTTCACATCAAAATTCCTCCCGAAAACCCCACAACCAACAACTAAGGCTTTCACGGGAGCATTACTTTACCATTTTGAACGCATCACCAGCAGAGGTTAAAGTATTGGGAAAATTGGAAGGAGCTTTGCTTTTTCTGTTTTGGGAAGATTATTGTCCTGGCTAAGTGTCCTCCCAGAATCTAACCTTGTCTCCTTGTCAAAATACCAGTCTGTGTCTCTCAATCAGCCCGAGGCCTTTGCTTTGATATCTGAAACTGCAAAGTTCTAGTACATGTGGTCCTAATATAATCTTCTCAAAATCATGGACCTTCTAGGATCTTTTACTTATTTACATGCAAGTTCATTTTCTAACCCAAGATTATCTTGGATGGTTGGCCTGCTTTATAAGTATTTATGCTTCTATATCCTTTTGTGAACATGAATCCGTTGACTTCAAACTTGGGAGCAATGCTTGATTTTCTGTTTCTGATTTGAGGATAATGTCTCTCATATACCTTCTAAGCTCTCTGGGACTTCTTGGCAGCCTTTTTGAGGCATTTGTGCTTCTATTCTGTTTGCCTAGAATTTTTCTTAAATCTTAACCAAAATCTTAATCACTTACTTTTTTCAGATTTCAGTTGGGTACTTCTTGGCAGATCTTGGATTGATTGTTTGGCTGTATCCTTCCTTAGGTGGGATGGAGTATGTAAGTACCTTCTCCGCTGATAGGCCTTCAAATTTGATAAGAGTAGTGCGTAATTAGGAAACTCTGATGATAGGTTGTCCACCACTCTCTTTCCGGACTAGCAGTAGCATACTCTGTTTTTTCTGGAGAAGGCCAACTCTATACTTATATGGTCCTCATTTCGGAGATTACAACTCCTGAGATTAATATGAGATGGTAGGTCTTCAATATGGTATTGGTTTTTTTATTTTAACGGTTCTGTCTCTTGATTTATTTCATGGTTAAAAAAAGGTTTCTGCCTCTTAATTCTTTCATGTTTTTTTGAAGGTATCTTGATACAGCTGGTATGAAGAGGTCCTGCGCATATTTGATTAATGGCATTGTAATATTTTTTGCATGGCTGGTGAGTTATTATCTGAAACCTATTCTATTCTCTTTTATTTTCACAAAAATGGCATAAGCATGCCTGTCTGAAGGCATTGTAGCCATCCTAAATCGTCTATTACGATTGGATTTTCTTTTACTCTGATTGATGTTTACATTCTCGCTGATGGGTGTTTCAAACAGGTTGCTCGCATATTGCTATTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTATTTTAAGATCAATTATGCATTTCCATGAAATCTCCACCAGTTAACAGGAATTTTTCAGTGGTTATGCATCCATCTCATGCCAGCTTTTGGGAATCACTCAAGATACAATGATATAGTTGTGATGTTCAACAGACTGGAAGCATAGAGCTATATAGCCTATATGCCACCTCACTGAGTAATTTTTTTCTGCAGGTAATTAAGATGCATGTAATCGGATATCTTTTGGTATTTGGAGTGCCAACAGTGCTAGGTATGATGAACTTGATGTGGTTCGGAAAGATCGTCAAGGGATTAATGAAAACTATATCAAAGAGGCGATGAGAAATGTCTTCCAGTCGATATCTCTTCCTCTTCAGTCTCTTGGTCTACATCTACACAATGGGTTGAGGAGAACAAGGAATTTGATGGTATGTAGTGTGTTGTAAATGGTTCAAAATAACTTAAACTTATTGACATTTAGTGTCTTTTTCGTCTTGTCAGATTTGTGTACCAATCCATTTTTTCTGTATAGTTGTCTTTTTTTT

mRNA sequence

AAAATGATATTTTAAGTTTGTTTATATTAGGGAAAAAAATAATTGATGAAAGATTCTTTTGCAGTGTCATTGATGGAACACAACTAAGAGTTGAGTATAATTAAATATTTCCTCAATCCTACACCGACTAATTTTCAACGAGACTCAATTTTTATATGTAATTCACAATGCACATTGAAGAATGTAATAAATAAAAGAGAGATTAAAAAAAAGAAAAAAAGAAAGGAAAAATCATGGGCTAAGGCGCGAAGCTATCATATTCCTTCGGTTAGTACTACAGAAAGGATTGGATAGAATGCAATTGAATCCACAAGAACAAGAGGATCCCATCTCTGGAAACTCAAATCCATTGCTAATTAGCAAAACCCACTTGCATTTCGCATTACCCAATTCCCCATACGCTATTATAATTTCTAATTTCTCTTCATCATGCCTTGATTTACCCCTTTTAGATTGTTGCGTTGCGGTTGAAGATTCCTAACGCTTCACATTGATTGAACCTCACGGTTCTTTTGTACCGGTCGGTTGTTGCATTTCCTTTACAGATTATCTTATATTGTTTTCTTCCCATTTTCTTATCTTTGAAAAAGAGAAAAACCCCCCCTTCTGCATCTCCTCGTGATCTGGGGTCTTCATCTATTATGAGGGATAACAATATGGAGGGAGGGAGCAAATAGTTAATTCAGTCTGAGGTACTGCGATCTGCCGAATGTTATGTAGTCAAACAACACAATGGCAATGTCTTTGAAGACTGTAATGGCTATTAAATCTTACCAAAGTCAAGCTGATGCATTAGTAAAGAACTATTTATTAGCAGACCGTTTTGTCCCATACACTTCTGTCCTTGGAGGCATGCTTGCTTGTAAATTGATTTATGATCTTACTCAATTAGTTAGCAATTTTTACATCAAGAGTTATCTGGGTCTTACAAAAATCCAACGAGTCGAGTGGAATAACCGCGGCATGTCCACTATTCATGCAATCTATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATGCTGGCCTTGTTACCTTCCAAAGTTCAACGTTGTCTACTTTCATATTGGGGATTTCAGTTGGGTACTTCTTGGCAGATCTTGGATTGATTGTTTGGCTGTATCCTTCCTTAGGTGGGATGGAGTATGTTGTCCACCACTCTCTTTCCGGACTAGCAGTAGCATACTCTGTTTTTTCTGGAGAAGGCCAACTCTATACTTATATGGTCCTCATTTCGGAGATTACAACTCCTGAGATTAATATGAGATGGTATCTTGATACAGCTGGTATGAAGAGGTCCTGCGCATATTTGATTAATGGCATTGTAATATTTTTTGCATGGCTGGTTGCTCGCATATTGCTATTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTAATTAAGATGCATGTAATCGGATATCTTTTGGTATTTGGAGTGCCAACAGTGCTAGGTATGATGAACTTGATGTGGTTCGGAAAGATCGTCAAGGGATTAATGAAAACTATATCAAAGAGGCGATGAGAAATGTCTTCCAGTCGATATCTCTTCCTCTTCAGTCTCTTGGTCTACATCTACACAATGGGTTGAGGAGAACAAGGAATTTGATGGTATGTAGTGTGTTGTAAATGGTTCAAAATAACTTAAACTTATTGACATTTAGTGTCTTTTTCGTCTTGTCAGATTTGTGTACCAATCCATTTTTTCTGTATAGTTGTCTTTTTTTT

Coding sequence (CDS)

ATGGCAATGTCTTTGAAGACTGTAATGGCTATTAAATCTTACCAAAGTCAAGCTGATGCATTAGTAAAGAACTATTTATTAGCAGACCGTTTTGTCCCATACACTTCTGTCCTTGGAGGCATGCTTGCTTGTAAATTGATTTATGATCTTACTCAATTAGTTAGCAATTTTTACATCAAGAGTTATCTGGGTCTTACAAAAATCCAACGAGTCGAGTGGAATAACCGCGGCATGTCCACTATTCATGCAATCTATATCTCAATTATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATGCTGGCCTTGTTACCTTCCAAAGTTCAACGTTGTCTACTTTCATATTGGGGATTTCAGTTGGGTACTTCTTGGCAGATCTTGGATTGATTGTTTGGCTGTATCCTTCCTTAGGTGGGATGGAGTATGTTGTCCACCACTCTCTTTCCGGACTAGCAGTAGCATACTCTGTTTTTTCTGGAGAAGGCCAACTCTATACTTATATGGTCCTCATTTCGGAGATTACAACTCCTGAGATTAATATGAGATGGTATCTTGATACAGCTGGTATGAAGAGGTCCTGCGCATATTTGATTAATGGCATTGTAATATTTTTTGCATGGCTGGTTGCTCGCATATTGCTATTTGGTTACACATTCTATCATGTTTACCTGCACTATGATCAGGTAATTAAGATGCATGTAATCGGATATCTTTTGGTATTTGGAGTGCCAACAGTGCTAGGTATGATGAACTTGATGTGGTTCGGAAAGATCGTCAAGGGATTAATGAAAACTATATCAAAGAGGCGATGA

Protein sequence

MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR

Homology

[Close]

BLAST of Clc01G09550 vs. NCBI nr
Match: XP_038894770.1 (TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894771.1 TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894772.1 TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894773.1 TLC domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147
Identity = 271/274 (98.91%), Postives = 273/274 (99.64%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADRFVP+TSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Clc01G09550 vs. NCBI nr
Match: XP_008459089.1 (PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_016902371.1 PREDICTED: transmembrane protein 56-like [Cucumis melo] >KAA0043306.1 transmembrane protein 56-like [Cucumis melo var. makuwa] >TYK29370.1 transmembrane protein 56-like [Cucumis melo var. makuwa])

HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146
Identity = 269/274 (98.18%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD FVP+TSVLGGMLACKLIYDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Clc01G09550 vs. NCBI nr
Match: XP_023543000.1 (transmembrane protein 56 [Cucurbita pepo subsp. pepo] >XP_023543001.1 transmembrane protein 56 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 4.6e-146
Identity = 266/275 (96.73%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADRF+PYTSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAGL+TFQSS LSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSMLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Clc01G09550 vs. NCBI nr
Match: KAG6573446.1 (TLC domain-containing protein 4-B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 527.7 bits (1358), Expect = 6.0e-146
Identity = 265/275 (96.36%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADRF+PYTSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAGL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVFGVPT+LG+MNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTMLGIMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Clc01G09550 vs. NCBI nr
Match: XP_022994862.1 (transmembrane protein 56-like [Cucurbita maxima] >XP_022994863.1 transmembrane protein 56-like [Cucurbita maxima] >XP_022994864.1 transmembrane protein 56-like [Cucurbita maxima])

HSP 1 Score: 524.2 bits (1349), Expect = 6.6e-145
Identity = 265/275 (96.36%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADRF+PYTSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAGL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHHSLSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Clc01G09550 vs. ExPASy Swiss-Prot
Match: Q8CGF5 (TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 59/215 (27.44%), Postives = 112/215 (52.09%), Query Frame = 0


Query: 62  YLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFIL 121
           Y  L+  +++EWN+R +ST H++ + I  LY  F+ +        G  T+ +  ++T   
Sbjct: 51  YNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFFFDEATITDPLWGDPTYVNINIAT--- 110

Query: 122 GISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLY-TYMVLISEIT 181
             + GY ++DL +I++ +  +G   +++HH  +GL   Y V +     Y     L++E++
Sbjct: 111 --ASGYLISDLLIILFNWKVIGDKFFIIHH-CAGLTAYYFVLTTGALAYIANFRLLAELS 170

Query: 182 TPEINMRWYLDTAGM-KRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHY--DQVIKM 241
           +P +N RW+ +     K S A +INGI++   + + RI+     ++ +Y  Y  +  I+ 
Sbjct: 171 SPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRIISIPPMYFFLYSVYGTEPYIRF 230

Query: 242 HVIGYLLVFGVPTVLGMMNLMWFGKIVKGLMKTIS 273
             +   +      +L +MN+MW  KI KG +K IS
Sbjct: 231 GFVIQSVWIVTCVILDVMNIMWMIKITKGCIKVIS 259

[Close]

BLAST of Clc01G09550 vs. ExPASy Swiss-Prot
Match: Q6PGS5 (TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.3e-14
Identity = 60/215 (27.91%), Postives = 109/215 (50.70%), Query Frame = 0


Query: 65  LTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFILGIS 124
           L+  Q++EWN+R +S+ HA+ +    LY + + D  +     G        +    + ++
Sbjct: 41  LSARQKIEWNSRTVSSFHALVVGCFCLYILVYDDAVNADPVWG-----DPFMVKLNVAVT 100

Query: 125 VGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQL--YTYMVLISEITTP 184
            GY ++DL LI++ +  +G   +V HH L+ L   Y V  GEG L  +    LI+E +TP
Sbjct: 101 SGYLISDLLLIIYYWKEIGDKYFVTHH-LAALYACYYVL-GEGMLPYFGNFRLIAEFSTP 160

Query: 185 EINMRWYLDTAG-MKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHY-DQVIKMHVI 244
            +N RW+ +  G  K S   ++NG+++  ++ + RI +    +  V+  +  +      +
Sbjct: 161 FVNQRWFFEVLGYSKYSLPNMVNGVLMTISFFIVRIAVIPIYYGRVFSTFGTEAFHRLGL 220

Query: 245 GYLLVFGVPTV-LGMMNLMWFGKIVKGLMKTISKR 275
           G    + + +V L +MN+MW  KI KG  K +  R
Sbjct: 221 GAQCAWIISSVSLDIMNVMWMIKIAKGCYKVLYHR 248

[Close]

BLAST of Clc01G09550 vs. ExPASy Swiss-Prot
Match: Q96MV1 (TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.3e-14
Identity = 67/233 (28.76%), Postives = 115/233 (49.36%), Query Frame = 0


Query: 57  FYIKSYLGLTKI----------QRVEWNNRGMSTIHAIYISIMSLY-FVFWSDLFSDQRH 116
           FY  SY    K+          +++EWN+R +ST H++ + I  LY F+F     +D   
Sbjct: 23  FYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLW 82

Query: 117 AGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSG 176
            G       +L+   + I+ GY ++DL +I+  +  +G   +++HH  S  A    + +G
Sbjct: 83  GG------PSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKNG 142

Query: 177 EGQLYTYMVLISEITTPEINMRWYLDTAGM-KRSCAYLINGIVIFFAWLVARI--LLFGY 236
                    L++E+++P +N RW+ +     K S A +INGI++   + + RI  +L  Y
Sbjct: 143 VLAYIGNFRLLAELSSPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRIASMLPHY 202

Query: 237 TFYHVYLHYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
            F +     +  I++ V+  L       VL +MN+MW  KI KG +K IS  R
Sbjct: 203 GFMYSVYGTEPYIRLGVLIQLSWVISCVVLDVMNVMWMIKISKGCIKVISHIR 249

[Close]

BLAST of Clc01G09550 vs. ExPASy Swiss-Prot
Match: Q5XIY2 (TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 57/240 (23.75%), Postives = 117/240 (48.75%), Query Frame = 0


Query: 37  VLGGMLACKLIYD-LTQLVSNFYIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVF 96
           V G  +  +L +  ++ ++S+ + + Y  L   +  +WN+R +ST+HA+ + +  LY ++
Sbjct: 9   VAGSFVGFQLFFSCVSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHALIVGLFCLYILW 68

Query: 97  WSDLFSDQRHAGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSG 156
           + D  ++    G        L    + I+ GY   DL L+   + ++G + +V HH  + 
Sbjct: 69  YDDAVNEDPVWG-----DPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAAL 128

Query: 157 LAVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLI-NGIVIFFAWLV 216
            A  Y +  G    +    LISE++TP +N RW+ +     R+   ++ NGI +   + +
Sbjct: 129 YAYGYVLTRGVLPYFANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFL 188

Query: 217 ARILLFGYTFYHVY-LHYDQVIKMHVIGYLLVFGVPTV-LGMMNLMWFGKIVKGLMKTIS 273
            RI +    +  V+ + Y    +   +   + + +  V L ++N++W  KI +G  K I+
Sbjct: 189 VRIAVMPPYWAKVFGIIYSPTFEKLGLAIQVAWIISCVCLDILNIIWMYKIARGCYKVIT 243

[Close]

BLAST of Clc01G09550 vs. ExPASy Swiss-Prot
Match: Q550S9 (TLC domain-containing protein 4 B OS=Dictyostelium discoideum OX=44689 GN=tlcd4b PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 60/236 (25.42%), Postives = 116/236 (49.15%), Query Frame = 0


Query: 42  LACKLIYD-----LTQLVSNFYIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFW 101
           L C L++      L +++   + K+ +G  + +R+EW NR +ST++AI  S +S+Y +++
Sbjct: 13  LPCFLLFTSLHLFLPKIIEIIFKKNNIGFYERKRIEWPNRIISTVNAIVTSALSIYCLYY 72

Query: 102 SDLFSDQRHAGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGL 161
           ++   +   +      +S +S FI      YF+ D  +  +    L     ++HH+++ L
Sbjct: 73  NEWIVNSLRS------TSEMSYFIFKFITYYFIYDFIISSYYSKYLFTWGNLLHHTIALL 132

Query: 162 AVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVAR 221
           +  +    G           +EITTP IN+R++L    +K    Y+ING++IF  +++ R
Sbjct: 133 SFTFLGGKGLAHHLLLSYTFTEITTPLINLRFFLLDLNLKNHPLYVINGLLIFVGFVLFR 192

Query: 222 ILLFGYTFYHVYL---HYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFGKIVKGLMK 270
           +     T + V     HY  +    +I + + F  P +  ++NL W   I K + K
Sbjct: 193 VFYTSATMFDVIFNQPHY-SIETDPLIPFFINFVYPAIT-LLNLYWTFYISKSIFK 240

[Close]

BLAST of Clc01G09550 vs. ExPASy TrEMBL
Match: A0A1S4E2B6 (transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103498304 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 9.9e-147
Identity = 269/274 (98.18%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD FVP+TSVLGGMLACKLIYDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Clc01G09550 vs. ExPASy TrEMBL
Match: A0A5D3E1H6 (Transmembrane protein 56-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00960 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 9.9e-147
Identity = 269/274 (98.18%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD FVP+TSVLGGMLACKLIYDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of Clc01G09550 vs. ExPASy TrEMBL
Match: A0A6J1K6A0 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111490462 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.2e-145
Identity = 265/275 (96.36%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADRF+PYTSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHAGL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHHSLSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Clc01G09550 vs. ExPASy TrEMBL
Match: A0A6J1GTT4 (transmembrane protein 56 OS=Cucurbita moschata OX=3662 GN=LOC111456894 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.2e-145
Identity = 263/275 (95.64%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQ DALVKNYLLADRF+PYTSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQTDALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+STIHAIYISIMSLYFVFWSDLFSDQRHA L+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHASLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           GY+LVFGVPT+LG+MNLMWFGKIVKGLMKTISKRR
Sbjct: 241 GYILVFGVPTMLGIMNLMWFGKIVKGLMKTISKRR 275

[Close]

BLAST of Clc01G09550 vs. ExPASy TrEMBL
Match: A0A0A0M188 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G704090 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.4e-145
Identity = 265/274 (96.72%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD FVP+TSVLGGMLACKL+YDLTQLVSNFY K
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRH GLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 274

[Close]

BLAST of Clc01G09550 vs. TAIR 10
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 409.5 bits (1051), Expect = 2.2e-114
Identity = 198/271 (73.06%), Postives = 237/271 (87.45%), Query Frame = 0


Query: 4   SLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIKSYL 63
           SL+T+ AIKSY  QA  LVKNYLLAD F+PYTSVL G+  CK++YDL   +SN + K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFILGI 123
            LTKIQR+EWNNRG+ST+HAI+IS MSLYFVFWSDLFSD+ H  LV F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I W YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYL 243
           IN+RWYLDTAGMK+S AY++NG+ IF AWLVARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WFGKIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of Clc01G09550 vs. TAIR 10
Match: AT1G31300.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 409.5 bits (1051), Expect = 2.2e-114
Identity = 198/271 (73.06%), Postives = 237/271 (87.45%), Query Frame = 0


Query: 4   SLKTVMAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIKSYL 63
           SL+T+ AIKSY  QA  LVKNYLLAD F+PYTSVL G+  CK++YDL   +SN + K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFILGI 123
            LTKIQR+EWNNRG+ST+HAI+IS MSLYFVFWSDLFSD+ H  LV F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I W YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYL 243
           IN+RWYLDTAGMK+S AY++NG+ IF AWLVARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WFGKIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of Clc01G09550 vs. TAIR 10
Match: AT4G19645.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 388.3 bits (996), Expect = 5.3e-108
Identity = 192/268 (71.64%), Postives = 228/268 (85.07%), Query Frame = 0


Query: 9   MAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIKSYLGLTKI 68
           M IKSYQ+QA+  V++YLLAD F+PYTSVL G+  CKL+YDLT+L S+ ++KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVT-FQSSTLSTFILGISVGY 128
           +R+EWNNRG+ST+HAI+IS M+LYF F+SDLFSDQR    +T F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I WLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYLLVFG 248
           WYLD AG+KRS AYL+NG+ IFFAWL ARILLF Y FYHVY HYDQVI+MH  GYLLVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           VP  L +MNL+WFGKIVKGL KT+ KR+
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]

BLAST of Clc01G09550 vs. TAIR 10
Match: AT4G19645.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 388.3 bits (996), Expect = 5.3e-108
Identity = 192/268 (71.64%), Postives = 228/268 (85.07%), Query Frame = 0


Query: 9   MAIKSYQSQADALVKNYLLADRFVPYTSVLGGMLACKLIYDLTQLVSNFYIKSYLGLTKI 68
           M IKSYQ+QA+  V++YLLAD F+PYTSVL G+  CKL+YDLT+L S+ ++KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVT-FQSSTLSTFILGISVGY 128
           +R+EWNNRG+ST+HAI+IS M+LYF F+SDLFSDQR    +T F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I WLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVIGYLLVFG 248
           WYLD AG+KRS AYL+NG+ IFFAWL ARILLF Y FYHVY HYDQVI+MH  GYLLVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFGKIVKGLMKTISKRR 276
           VP  L +MNL+WFGKIVKGL KT+ KR+
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKRQ 268

[Close]

BLAST of Clc01G09550 vs. TAIR 10
Match: AT4G10360.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-64
Identity = 118/240 (49.17%), Postives = 164/240 (68.33%), Query Frame = 0


Query: 36  SVLGGMLACKLIYDLTQLVSNFYIKSYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVF 95
           S+  G L CK++YDLT+ +S      Y  L    R+EWNNRG ST HA++ S+ S+YF+ 
Sbjct: 20  SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query: 96  WSDLFSDQRHAGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSG 155
            SD F +  H   V   ++ LS  ++GIS+GYFLADL +I W +P+LGG+EYV HH LS 
Sbjct: 80  ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query: 156 LAVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVA 215
            A+  SV SG+ Q Y ++VL+SE TTP +N+RWYLD +G K S AY +NGI +F  WLVA
Sbjct: 140 FAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLNGIALFLGWLVA 199

Query: 216 RILLFGYTFYHVYLHYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKRR 275
           R+LLF + F H+YLH+ QV ++  +G+  +  +P  L +MNL+WF KI KGL+KT+SK +
Sbjct: 200 RVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAK 259

The following BLAST results are available for this feature:

BLAST of Clc01G09550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894770.1	1.9e-147	98.91	TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894771.1 TLC dom...	[more]
XP_008459089.1	2.0e-146	98.18	PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_016902371.1 PREDICTE...	[more]
XP_023543000.1	4.6e-146	96.73	transmembrane protein 56 [Cucurbita pepo subsp. pepo] >XP_023543001.1 transmembr...	[more]
KAG6573446.1	6.0e-146	96.36	TLC domain-containing protein 4-B, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022994862.1	6.6e-145	96.36	transmembrane protein 56-like [Cucurbita maxima] >XP_022994863.1 transmembrane p...	[more]

BLAST of Clc01G09550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8CGF5	1.5e-14	27.44	TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1	[more]
Q6PGS5	7.3e-14	27.91	TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1	[more]
Q96MV1	7.3e-14	28.76	TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1	[more]
Q5XIY2	1.5e-11	23.75	TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1	[more]
Q550S9	1.5e-11	25.42	TLC domain-containing protein 4 B OS=Dictyostelium discoideum OX=44689 GN=tlcd4b...	[more]

BLAST of Clc01G09550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2B6	9.9e-147	98.18	transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103498304 PE=4 SV=1	[more]
A0A5D3E1H6	9.9e-147	98.18	Transmembrane protein 56-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1K6A0	3.2e-145	96.36	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111490462 PE=4 S...	[more]
A0A6J1GTT4	4.2e-145	95.64	transmembrane protein 56 OS=Cucurbita moschata OX=3662 GN=LOC111456894 PE=4 SV=1	[more]
A0A0A0M188	5.4e-145	96.72	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G704090 PE=4 SV...	[more]

BLAST of Clc01G09550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31300.1	2.2e-114	73.06	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.2	2.2e-114	73.06	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.1	5.3e-108	71.64	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.2	5.3e-108	71.64	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G10360.1	1.6e-64	49.17	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 68..272 e-value: 7.3E-38 score: 141.8
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 72..265 e-value: 5.6E-30 score: 104.6
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 68..272 score: 33.04517
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 6..274
None	No IPR available	PANTHER	PTHR13439:SF62	OS01G0768200 PROTEIN	coord: 6..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G09550.1	Clc01G09550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055088	lipid homeostasis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane