Clc01G07960 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G07960
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr01: 8115294 .. 8117483 (+)
RNA-Seq ExpressionClc01G07960
SyntenyClc01G07960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCCTCAAATCCCTTCAAAACCCCACAAGCAATACTTCTACTACGGCCACCGCCACCGCAATCCCAACCAGCACCGCCCCACCGTCTACGGCGGCCTCTTCTCCAACCGCCAATCCCTCTCTCCACCCAATCCTCACAAACCCATTTCCCCAAAACCCCAACCCTTCCTTCTTCACAACTGGGATCCTGATCACCCCTCTCAACAAACTTCCAACCTCACGCCGTCCCCCTCCGAGGCCTTCTTCTCCAGCTCCCTCCGCCTTTCCCCAATTGCTCGCTTCATCGTCGACGCCTTTCGGAAGAATCAAAACCAGTGGGGTCCCCCGGTCATCTCTGAACTCAGCAAGCTCCGCCGCGTTACTCCGGACCTTGTGGCGGAGGTTCTCAAGGCTTCTCACCGCCGTGATTCTAACCCCATTTTGGCCTCCAAGTTCTTCCACTGGGCTGGTAAGCAAAAGGGGTTTCATCACAATTTCGCTTCTTACAATGCTTTTGCTTATTGTTTGAATCGCCACAATCGCTTCAGGGCTGCCGATCAGATTCCTGAGCTCATGGATTCACAAGGTAAGCCTCCTAGTGAAAAACAGTTTGAGATTCTGATTAGGATGCATTGCGATGCCAATAGGGGTCTTAGAGTTTACTATGTGTATGAAAAGATGAAGAAATTTGGGGTTGTTCCCCGTGTCTTCTTGTATAACAGGATTCTTGATGCCTTAGTCAAAACAGGCCATTTGGATTTAGCTTTATCTGTTTATAGGGACTTCCAGGAAAATGGGCTAGTGGAAGAGAGTATCACGTTTATGATTTTGATTAAAGGATTGTGTAAAGCAGGGAGAGTTGATGAAATGCTGGAGCTTTTGGCTCGGATGAGGGCGAATTTGTGTAAGCCTGATGTGTTTGCTTATACAGCAATGGTGAAGGTGTTGGTTTCTGAGGAGAATTTGGAGGGATGTTTGAGAGTTTGGGATGAAATGAAAGTAGATAGAGTAGAGCCTGATGTTATGGCATATGGGACTCTGATTATTGGATTGTGCAAAGTCGGGCGGGTGCAAAAAGGGTTTGAATTGTTTCAAGAGATGAAAGGGAAGAGGATTTTGATAGACAGAGCAATTTATGGGTCATTGATTGAGGCATTTGTGCAGGATGAGAAAGTTGGAGTGGCTTGTGATTTGTTGAAGGATTTGGTAGATTCAGGGTATAGAGCTGATTTGGGGATATATCATTCTCTCATTAAAGGTCTTTGTAATGTAAATCAAGTTGATAAGGCTTACAAACTCTTTCAACTAACCATACGGGAGGATCTTAAGCCAGATTTCGAAACTGTGAAACCTATTATGATGATGTGCGTGGAGATGAGAAGAATGGACGACTTTTGGAAGTTATTAACCTTGTTGCAGAAGTTGGAACTTTATGTGGATAATGTTCTTTCAAAATTTCTATCTTTTATGGTAGAAGAGGAGGACAAAATAAACACAGCTCTAGATGTATTTCGTGGCATGAATGATAAGGGCTATGGCAGTGTTGCCATATACAATATCATCATGGGGGCTCTTCATCGCTATGGGCAAGCAAAGAAGGCACTAGAGATCTACAATGACATGAAGAGCTCAAATATTGAACCAGATTCGTCAACTTACTCCATTGCCATATCATGCTTTGTTGAAGTTGGTAAAATCCAAGAGGCTTGTTTATCTCATAACAAAATAGTTGAGCTGGGTTCAGTTCCTTCCGCAGCTGCCTACTGTTCTCTTTCAGAAGGTCTCTTCAAAATCTGCGAGATTGATGCAGTTATGCTGCTTGTTCGAGACTGCCTAGCAAACATCGAGAGTGGACCTCTGGAGTTTAAATATGCTCTAACAATTCTCCATGTATGTAAGTCAGGTAAAGCAGAAATGGTGATTGATGTTCTTAATGAAATGGTGCAACAAGATTGCCCTCTGAGTGCAGTCGCCTACTCGGCTATCATATCCGGAATGTCTAAGTACGGGACACTTGATGAGGCAAAGAAAGTGTTTTTGCATCTGAGGGAGAGCAGACAGTTGACAGAAGCTAACTGCATTGTGTGTGAGGAGTTGTTAATCGATCACATGAAAAAGAAAACAGCAGATTTGGTAAGATGTGGGTTGAAGTTTTTCAATCTTGAATCCAAGTTGAAAGCAAAGGGTAGCAAGTTGCTGTCAACTTAA

mRNA sequence

ATGCCCCCTCAAATCCCTTCAAAACCCCACAAGCAATACTTCTACTACGGCCACCGCCACCGCAATCCCAACCAGCACCGCCCCACCGTCTACGGCGGCCTCTTCTCCAACCGCCAATCCCTCTCTCCACCCAATCCTCACAAACCCATTTCCCCAAAACCCCAACCCTTCCTTCTTCACAACTGGGATCCTGATCACCCCTCTCAACAAACTTCCAACCTCACGCCGTCCCCCTCCGAGGCCTTCTTCTCCAGCTCCCTCCGCCTTTCCCCAATTGCTCGCTTCATCGTCGACGCCTTTCGGAAGAATCAAAACCAGTGGGGTCCCCCGGTCATCTCTGAACTCAGCAAGCTCCGCCGCGTTACTCCGGACCTTGTGGCGGAGGTTCTCAAGGCTTCTCACCGCCGTGATTCTAACCCCATTTTGGCCTCCAAGTTCTTCCACTGGGCTGGTAAGCAAAAGGGGTTTCATCACAATTTCGCTTCTTACAATGCTTTTGCTTATTGTTTGAATCGCCACAATCGCTTCAGGGCTGCCGATCAGATTCCTGAGCTCATGGATTCACAAGGTAAGCCTCCTAGTGAAAAACAGTTTGAGATTCTGATTAGGATGCATTGCGATGCCAATAGGGGTCTTAGAGTTTACTATGTGTATGAAAAGATGAAGAAATTTGGGGTTGTTCCCCGTGTCTTCTTGTATAACAGGATTCTTGATGCCTTAGTCAAAACAGGCCATTTGGATTTAGCTTTATCTGTTTATAGGGACTTCCAGGAAAATGGGCTAGTGGAAGAGAGTATCACGTTTATGATTTTGATTAAAGGATTGTGTAAAGCAGGGAGAGTTGATGAAATGCTGGAGCTTTTGGCTCGGATGAGGGCGAATTTGTGTAAGCCTGATGTGTTTGCTTATACAGCAATGGTGAAGGTGTTGGTTTCTGAGGAGAATTTGGAGGGATGTTTGAGAGTTTGGGATGAAATGAAAGTAGATAGAGTAGAGCCTGATGTTATGGCATATGGGACTCTGATTATTGGATTGTGCAAAGTCGGGCGGGTGCAAAAAGGGTTTGAATTGTTTCAAGAGATGAAAGGGAAGAGGATTTTGATAGACAGAGCAATTTATGGGTCATTGATTGAGGCATTTGTGCAGGATGAGAAAGTTGGAGTGGCTTGTGATTTGTTGAAGGATTTGGTAGATTCAGGGTATAGAGCTGATTTGGGGATATATCATTCTCTCATTAAAGGTCTTTGTAATGTAAATCAAGTTGATAAGGCTTACAAACTCTTTCAACTAACCATACGGGAGGATCTTAAGCCAGATTTCGAAACTGTGAAACCTATTATGATGATGTGCGTGGAGATGAGAAGAATGGACGACTTTTGGAAGTTATTAACCTTGTTGCAGAAGTTGGAACTTTATGTGGATAATGTTCTTTCAAAATTTCTATCTTTTATGGTAGAAGAGGAGGACAAAATAAACACAGCTCTAGATGTATTTCGTGGCATGAATGATAAGGGCTATGGCAGTGTTGCCATATACAATATCATCATGGGGGCTCTTCATCGCTATGGGCAAGCAAAGAAGGCACTAGAGATCTACAATGACATGAAGAGCTCAAATATTGAACCAGATTCGTCAACTTACTCCATTGCCATATCATGCTTTGTTGAAGTTGGTAAAATCCAAGAGGCTTGTTTATCTCATAACAAAATAGTTGAGCTGGGTTCAGTTCCTTCCGCAGCTGCCTACTGTTCTCTTTCAGAAGGTCTCTTCAAAATCTGCGAGATTGATGCAGTTATGCTGCTTGTTCGAGACTGCCTAGCAAACATCGAGAGTGGACCTCTGGAGTTTAAATATGCTCTAACAATTCTCCATGTATGTAAGTCAGGTAAAGCAGAAATGGTGATTGATGTTCTTAATGAAATGGTGCAACAAGATTGCCCTCTGAGTGCAGTCGCCTACTCGGCTATCATATCCGGAATGTCTAAGTACGGGACACTTGATGAGGCAAAGAAAGTGTTTTTGCATCTGAGGGAGAGCAGACAGTTGACAGAAGCTAACTGCATTGTGTGTGAGGAGTTGTTAATCGATCACATGAAAAAGAAAACAGCAGATTTGGTAAGATGTGGGTTGAAGTTTTTCAATCTTGAATCCAAGTTGAAAGCAAAGGGTAGCAAGTTGCTGTCAACTTAA

Coding sequence (CDS)

ATGCCCCCTCAAATCCCTTCAAAACCCCACAAGCAATACTTCTACTACGGCCACCGCCACCGCAATCCCAACCAGCACCGCCCCACCGTCTACGGCGGCCTCTTCTCCAACCGCCAATCCCTCTCTCCACCCAATCCTCACAAACCCATTTCCCCAAAACCCCAACCCTTCCTTCTTCACAACTGGGATCCTGATCACCCCTCTCAACAAACTTCCAACCTCACGCCGTCCCCCTCCGAGGCCTTCTTCTCCAGCTCCCTCCGCCTTTCCCCAATTGCTCGCTTCATCGTCGACGCCTTTCGGAAGAATCAAAACCAGTGGGGTCCCCCGGTCATCTCTGAACTCAGCAAGCTCCGCCGCGTTACTCCGGACCTTGTGGCGGAGGTTCTCAAGGCTTCTCACCGCCGTGATTCTAACCCCATTTTGGCCTCCAAGTTCTTCCACTGGGCTGGTAAGCAAAAGGGGTTTCATCACAATTTCGCTTCTTACAATGCTTTTGCTTATTGTTTGAATCGCCACAATCGCTTCAGGGCTGCCGATCAGATTCCTGAGCTCATGGATTCACAAGGTAAGCCTCCTAGTGAAAAACAGTTTGAGATTCTGATTAGGATGCATTGCGATGCCAATAGGGGTCTTAGAGTTTACTATGTGTATGAAAAGATGAAGAAATTTGGGGTTGTTCCCCGTGTCTTCTTGTATAACAGGATTCTTGATGCCTTAGTCAAAACAGGCCATTTGGATTTAGCTTTATCTGTTTATAGGGACTTCCAGGAAAATGGGCTAGTGGAAGAGAGTATCACGTTTATGATTTTGATTAAAGGATTGTGTAAAGCAGGGAGAGTTGATGAAATGCTGGAGCTTTTGGCTCGGATGAGGGCGAATTTGTGTAAGCCTGATGTGTTTGCTTATACAGCAATGGTGAAGGTGTTGGTTTCTGAGGAGAATTTGGAGGGATGTTTGAGAGTTTGGGATGAAATGAAAGTAGATAGAGTAGAGCCTGATGTTATGGCATATGGGACTCTGATTATTGGATTGTGCAAAGTCGGGCGGGTGCAAAAAGGGTTTGAATTGTTTCAAGAGATGAAAGGGAAGAGGATTTTGATAGACAGAGCAATTTATGGGTCATTGATTGAGGCATTTGTGCAGGATGAGAAAGTTGGAGTGGCTTGTGATTTGTTGAAGGATTTGGTAGATTCAGGGTATAGAGCTGATTTGGGGATATATCATTCTCTCATTAAAGGTCTTTGTAATGTAAATCAAGTTGATAAGGCTTACAAACTCTTTCAACTAACCATACGGGAGGATCTTAAGCCAGATTTCGAAACTGTGAAACCTATTATGATGATGTGCGTGGAGATGAGAAGAATGGACGACTTTTGGAAGTTATTAACCTTGTTGCAGAAGTTGGAACTTTATGTGGATAATGTTCTTTCAAAATTTCTATCTTTTATGGTAGAAGAGGAGGACAAAATAAACACAGCTCTAGATGTATTTCGTGGCATGAATGATAAGGGCTATGGCAGTGTTGCCATATACAATATCATCATGGGGGCTCTTCATCGCTATGGGCAAGCAAAGAAGGCACTAGAGATCTACAATGACATGAAGAGCTCAAATATTGAACCAGATTCGTCAACTTACTCCATTGCCATATCATGCTTTGTTGAAGTTGGTAAAATCCAAGAGGCTTGTTTATCTCATAACAAAATAGTTGAGCTGGGTTCAGTTCCTTCCGCAGCTGCCTACTGTTCTCTTTCAGAAGGTCTCTTCAAAATCTGCGAGATTGATGCAGTTATGCTGCTTGTTCGAGACTGCCTAGCAAACATCGAGAGTGGACCTCTGGAGTTTAAATATGCTCTAACAATTCTCCATGTATGTAAGTCAGGTAAAGCAGAAATGGTGATTGATGTTCTTAATGAAATGGTGCAACAAGATTGCCCTCTGAGTGCAGTCGCCTACTCGGCTATCATATCCGGAATGTCTAAGTACGGGACACTTGATGAGGCAAAGAAAGTGTTTTTGCATCTGAGGGAGAGCAGACAGTTGACAGAAGCTAACTGCATTGTGTGTGAGGAGTTGTTAATCGATCACATGAAAAAGAAAACAGCAGATTTGGTAAGATGTGGGTTGAAGTTTTTCAATCTTGAATCCAAGTTGAAAGCAAAGGGTAGCAAGTTGCTGTCAACTTAA

Protein sequence

MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLHNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRRVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLKAKGSKLLST
Homology
BLAST of Clc01G07960 vs. NCBI nr
Match: XP_038906442.1 (pentatricopeptide repeat-containing protein At4g20740 [Benincasa hispida])

HSP 1 Score: 1363.2 bits (3527), Expect = 0.0e+00
Identity = 680/729 (93.28%), Postives = 702/729 (96.30%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQIPSK HKQYFYYGHRHRNPNQHRPTVYGGLFSNRQS+SPPNPHKPISPKP+PFLLH
Sbjct: 1   MPPQIPSKAHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSISPPNPHKPISPKPKPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PS Q SNL+PS SEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDRPSHQHSNLSPSASEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLALSVYRDFQENGLVEESITFMILIKGLCKAGR+DEMLELLARMRANLCKPDV
Sbjct: 241 VKTNHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRIDEMLELLARMRANLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVLVSEENL+GCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKGFEL QE
Sbjct: 301 FAYTAMVKVLVSEENLDGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGFELLQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VDKAYKLFQLTIREDLKPD ETVKPIMMM VE RRM+D WKLLTLLQKLE   D+VLSKF
Sbjct: 421 VDKAYKLFQLTIREDLKPDIETVKPIMMMYVETRRMEDLWKLLTLLQKLEPSADDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           LSFMVEEEDKI+TALDVF GM DKGYG+VA+YNIIMGALH+YGQAKKALEIY+DMKSSNI
Sbjct: 481 LSFMVEEEDKISTALDVFCGMIDKGYGNVAVYNIIMGALHQYGQAKKALEIYDDMKSSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           +PDSSTYSIA+SCFVEVGKIQEAC SHNKIVELGSVPS AAY SLSEGLFKICEIDAVM+
Sbjct: 541 KPDSSTYSIAVSCFVEVGKIQEACASHNKIVELGSVPSKAAYYSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLANIE+GPLEFKYAL ILHVCK GKAEMV DV+NEMVQQDCP SAVAYSAIISGM
Sbjct: 601 LVRDCLANIENGPLEFKYALMILHVCKLGKAEMVNDVINEMVQQDCPPSAVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLESKLK
Sbjct: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESKLK 720

Query: 721 AKGSKLLST 730
           AKG KLLST
Sbjct: 721 AKGCKLLST 729

BLAST of Clc01G07960 vs. NCBI nr
Match: XP_023551127.1 (pentatricopeptide repeat-containing protein At4g20740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1314.3 bits (3400), Expect = 0.0e+00
Identity = 651/728 (89.42%), Postives = 691/728 (94.92%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQIPSKP+KQYF+YGHRHRNP QHRPTVYGGLF+NRQSL+PPNP KPISPKPQPF L 
Sbjct: 1   MPPQIPSKPYKQYFFYGHRHRNPKQHRPTVYGGLFTNRQSLTPPNPDKPISPKPQPFHLR 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD P +Q SNLTPSPSEAFFSS+LRLSPIARFIVDAFRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDRPFKQHSNLTPSPSEAFFSSALRLSPIARFIVDAFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGV+PRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVIPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKTG++DLALSVYRDFQENGLVEE+ITFMILIKGLCKAGRVDEMLELL RMRAN CKPDV
Sbjct: 241 VKTGNMDLALSVYRDFQENGLVEENITFMILIKGLCKAGRVDEMLELLGRMRANSCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVLVSEENLEGCLRVWDEM  DRVEPDVMAYGTLI GLCKVGRVQK FELFQE
Sbjct: 301 FAYTAMVKVLVSEENLEGCLRVWDEMIADRVEPDVMAYGTLITGLCKVGRVQKAFELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYGSLIEAFVQDEKVG+A DLLKDLVDSGYRADLGIY SLI+GLCN NQ
Sbjct: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGLAFDLLKDLVDSGYRADLGIYDSLIRGLCNENQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VD+AYKLF++TIREDL+PDF TVKPIM+  VE RRM+D WKLL+LLQKLEL +D+VLSKF
Sbjct: 421 VDRAYKLFRVTIREDLRPDFGTVKPIMIQYVETRRMEDLWKLLSLLQKLELSMDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           +S MVEEEDK + ALDVFRG+NDKGYGSVAIYNII+GALHR+GQAKKALEIYNDMKSSNI
Sbjct: 481 MSLMVEEEDKTSAALDVFRGLNDKGYGSVAIYNIIIGALHRHGQAKKALEIYNDMKSSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPDSSTYSI +SC+VEV +IQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDSSTYSIVVSCYVEVEEIQEACASHNKIVELGSVPSVAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN ESGPLEFKYALTIL  CKSGKAEMVIDVLNEMVQQ CP+SAVAYSAI+SGM
Sbjct: 601 LVRDCLANTESGPLEFKYALTILQACKSGKAEMVIDVLNEMVQQGCPVSAVAYSAIVSGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
            KYGT+D AKKVFLHL+E RQ+ EANCIVCEE+L++HMKKKTADLVRCGLKFFNLESKLK
Sbjct: 661 GKYGTIDGAKKVFLHLKERRQMREANCIVCEEVLVEHMKKKTADLVRCGLKFFNLESKLK 720

Query: 721 AKGSKLLS 729
           AKGSKLLS
Sbjct: 721 AKGSKLLS 728

BLAST of Clc01G07960 vs. NCBI nr
Match: KAG7016643.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 652/728 (89.56%), Postives = 692/728 (95.05%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQIPSKP+KQYF+YGHRHRNP QHRPTVYGGLF+NRQSL+PPNP KPISPKPQPF L 
Sbjct: 1   MPPQIPSKPYKQYFFYGHRHRNPKQHRPTVYGGLFTNRQSLTPPNPDKPISPKPQPFHLR 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD P +Q SNLTPSPSEAFFSS+LRLSPIARFIVDAFRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDRPFKQHSNLTPSPSEAFFSSALRLSPIARFIVDAFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGV+PRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVIPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKTG+LDLALSVYRDFQENGLVEE+ITFMILIKGLCKAGRVDEMLELL RMRAN CKPDV
Sbjct: 241 VKTGNLDLALSVYRDFQENGLVEENITFMILIKGLCKAGRVDEMLELLGRMRANSCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVLVSEENLEGCLRVWDEM  DRVEPDVMAYGTLIIGLCKVGRV+K FELFQE
Sbjct: 301 FAYTAMVKVLVSEENLEGCLRVWDEMIADRVEPDVMAYGTLIIGLCKVGRVRKAFELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYGSLIEAFVQDEKVG+A DLLKDLVDSGYRADL IY SLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGLAFDLLKDLVDSGYRADLEIYDSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VD+AYKLF++TIREDLKPDF TVKPIM+  VE RRM+D WKLL+LLQKLEL +D++LSKF
Sbjct: 421 VDRAYKLFRVTIREDLKPDFGTVKPIMIQYVETRRMEDLWKLLSLLQKLELSMDDLLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           +S MVEEEDKI+TALDVFRG+ DKGYGSVAIYNII+GALHR+GQAKKALEIYNDMK+SNI
Sbjct: 481 MSLMVEEEDKISTALDVFRGLIDKGYGSVAIYNIIIGALHRHGQAKKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPD STYSI +SC+VEV +IQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDPSTYSIIVSCYVEVEEIQEACASHNKIVELGSVPSVAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN ESGPLEFKYALTIL  CKSGKAEMVIDVLNEMVQQ CP+SAV YSAI+SGM
Sbjct: 601 LVRDCLANTESGPLEFKYALTILQACKSGKAEMVIDVLNEMVQQGCPVSAVTYSAIVSGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
            KYGT+D AKKVFLHL+ESRQ+ EANCIVCEE+L++HMKKKTADLVRCGLKFFNLESKLK
Sbjct: 661 GKYGTIDGAKKVFLHLKESRQMREANCIVCEEVLVEHMKKKTADLVRCGLKFFNLESKLK 720

Query: 721 AKGSKLLS 729
           AKGSKLLS
Sbjct: 721 AKGSKLLS 728

BLAST of Clc01G07960 vs. NCBI nr
Match: XP_004140286.1 (pentatricopeptide repeat-containing protein At4g20740 [Cucumis sativus] >KGN51097.1 hypothetical protein Csa_008848 [Cucumis sativus])

HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 651/729 (89.30%), Postives = 689/729 (94.51%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+P SPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPTSPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL  S S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSSTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSN ILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNSILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEES+TFMILIKGLCKAGRVDEMLELLARMRANLCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVL S++NLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VDKAYKLFQLTIREDLKPDFETVKPIMMM VE  RMDDFWKL++LLQKLE  VD+VLSKF
Sbjct: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMYVETGRMDDFWKLVSLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           LSFMVEEEDKI+ ALDVF GM DKGYGSVA+YN+++GALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LSFMVEEEDKISVALDVFHGMIDKGYGSVALYNVMVGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EP+S+TYSIA+ CFVE+GKIQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEI+AVM+
Sbjct: 541 EPNSTTYSIALLCFVEIGKIQEACASHNKIVELGSVPSIAAYCSLSEGLFKICEINAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLANIESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANIESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCVPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGTLDEAKKVFLHLRE +QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTLDEAKKVFLHLRERKQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Clc01G07960 vs. NCBI nr
Match: KAA0050180.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ98226.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1310.0 bits (3389), Expect = 0.0e+00
Identity = 650/729 (89.16%), Postives = 686/729 (94.10%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+PISPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPISPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL  S S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSSTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRA LCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRATLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKV VS+ENLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVFVSKENLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCN+NQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLYKDLVDSGYRADLGIYHSLIKGLCNLNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           V KAYKLFQLTIREDLKPDFETVKPIMMM VEM RMDD WKL+TLLQKLE  VD+VLSKF
Sbjct: 421 VHKAYKLFQLTIREDLKPDFETVKPIMMMYVEMGRMDDLWKLVTLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           L FMVEEEDKI+ ALD+F GM DKGYGSVA+YN+IMGALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LCFMVEEEDKISVALDLFHGMIDKGYGSVALYNVIMGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPDS+TYSIA+ CFVE+GKI+EAC SHNKI+ELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDSTTYSIAVLCFVEIGKIREACASHNKIIELGSVPSMAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN+ESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANVESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCAPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGT +EAKKVFLHLRE  QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTFNEAKKVFLHLRERSQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Clc01G07960 vs. ExPASy Swiss-Prot
Match: Q9SVH3 (Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana OX=3702 GN=At4g20740 PE=3 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 2.5e-255
Identity = 449/728 (61.68%), Postives = 562/728 (77.20%), Query Frame = 0

Query: 2   PPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLS--PPNPHKPISPKPQPFLL 61
           PP +  K  K  F++G  HR P+Q+RPTVYGGLFSNRQS+    P P         PF L
Sbjct: 6   PPNLSDKSLKPNFFHG--HRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTPFDL 65

Query: 62  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 121
             WDP+      S   PS S    ++S RLSPIARF++DAFRKN+N WGP V+SEL+KLR
Sbjct: 66  RKWDPETHLPPPS--PPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLR 125

Query: 122 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 181
           RVTP +VAEVLK      ++  +A+KFFHWAGKQKG+ H+FA+YNAFAYCLNR+  FRAA
Sbjct: 126 RVTPSIVAEVLKLG----NDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAA 185

Query: 182 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 241
           DQ+PELMDSQG+PPSEKQFEILIRMH D  RGLRVYYVYEKMKKFG  PRVFLYNRI+DA
Sbjct: 186 DQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDA 245

Query: 242 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 301
           LVK G+ DLAL+VY DF+E+GLVEES TFMIL+KGLCKAGR++EMLE+L RMR NLCKPD
Sbjct: 246 LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD 305

Query: 302 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 361
           VFAYTAM+K LVSE NL+  LRVWDEM+ D ++PDVMAYGTL++GLCK GRV++G+ELF 
Sbjct: 306 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFM 365

Query: 362 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 421
           EMKGK+ILIDR IY  LIE FV D KV  AC+L +DLVDSGY AD+GIY+++IKGLC+VN
Sbjct: 366 EMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVN 425

Query: 422 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSK 481
           QVDKAYKLFQ+ I E+L+PDFET+ PIM+  V M R+ DF  +L  + +L   V + L++
Sbjct: 426 QVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQ 485

Query: 482 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 541
           F   +  +E+K   ALDVF  +  KG+GSV++YNI+M AL++ G  +K+L ++ +M+   
Sbjct: 486 FFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLG 545

Query: 542 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 601
            EPDSS+YSIAI CFVE G ++ AC  H KI+E+  VPS AAY SL++GL +I EIDAVM
Sbjct: 546 FEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVM 605

Query: 602 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 661
           LLVR+CL N+ESGP+EFKYALT+ HVCK   AE V+ V++EM Q+   ++ V Y AIISG
Sbjct: 606 LLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISG 665

Query: 662 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 721
           MSK+GT+  A++VF  L++ + +TEA+ +V EE+LI+  KKKTADLV  G+KFF LESKL
Sbjct: 666 MSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKL 725

Query: 722 KAKGSKLL 728
           +AKG +LL
Sbjct: 726 RAKGCRLL 725

BLAST of Clc01G07960 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.0e-42
Identity = 164/661 (24.81%), Postives = 291/661 (44.02%), Query Frame = 0

Query: 97  VDAFR---KNQNQWGPPVISELSKLRRVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQ 156
           VDA +   + +  W   + SEL   RR+    V E+L  +     +P L  +FF++ G  
Sbjct: 42  VDAVKRIVRGKRSWEIALSSELVS-RRLKTVHVEEILIGT---IDDPKLGLRFFNFLGLH 101

Query: 157 KGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSE-----------------K 216
           +GF H+ AS+    + L + N F  A  + + +  +   PS+                  
Sbjct: 102 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 161

Query: 217 QFEILIRMHCDANRGLRVYYVYEKM-KKFGVVPRVFLYNRILDALVKTGHLDLALSVYRD 276
            F++LI+ +  + R L    V++ M  K  ++P V   + +L  LVK  H  LA+ ++ D
Sbjct: 162 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 221

Query: 277 FQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEEN 336
               G+  +   +  +I+ LC+   +    E++A M A  C  ++  Y  ++  L  ++ 
Sbjct: 222 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 281

Query: 337 LEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGS 396
           +   + +  ++    ++PDV+ Y TL+ GLCKV   + G E+  EM   R     A   S
Sbjct: 282 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 341

Query: 397 LIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIRED 456
           L+E   +  K+  A +L+K +VD G   +L +Y++LI  LC   +  +A  LF    +  
Sbjct: 342 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 401

Query: 457 LKPDFETVKPIMMMCVEMRRMDDFWKLLTLL----QKLELYVDNVL----SKFLSFMVEE 516
           L+P+  T   ++ M     ++D     L  +     KL +Y  N L     KF      E
Sbjct: 402 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 461

Query: 517 EDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTY 576
                        +N K   +V  Y  +MG     G+  KAL +Y++M    I P   T+
Sbjct: 462 GFMAEM-------INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 521

Query: 577 SIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLA 636
           +  +S     G I++A    N++ E    P+   Y  + EG  +  ++      +++   
Sbjct: 522 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM-- 581

Query: 637 NIESG--PLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGT 696
             E G  P  + Y   I  +C +G+A      ++ + + +C L+ + Y+ ++ G  + G 
Sbjct: 582 -TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 641

Query: 697 LDEAKKVFLHLRESRQLTEANCIVCEELLID-HMKKKTADLVRCGLKFFNLESKLKAKGS 726
           L+EA  V    +E  Q      +VC  +LID  +K K   L      FF L  ++  +G 
Sbjct: 642 LEEALSV---CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL------FFGLLKEMHDRGL 679

BLAST of Clc01G07960 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.4e-42
Identity = 143/577 (24.78%), Postives = 252/577 (43.67%), Query Frame = 0

Query: 139 NPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELM------------ 198
           N   + + F W G Q G+ H+F  Y      L  +  F+  D++   M            
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 199 -------DSQGKP-----------------PSEKQFEILIRMHCDANRGLRVYYVYEKMK 258
                  D  G P                 P+ K + +++ +    N       V+  M 
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209

Query: 259 KFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVD 318
              + P +F +  ++ A      +D ALS+ RD  ++G V  S+ +  LI  L K  RV+
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269

Query: 319 EMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLI 378
           E L+LL  M    C PD   +  ++  L   + +    ++ + M +    PD + YG L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329

Query: 379 IGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDS-GY 438
            GLCK+GRV    +LF  +    I+    I+ +LI  FV   ++  A  +L D+V S G 
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 389

Query: 439 RADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWK 498
             D+  Y+SLI G      V  A ++      +  KP+  +   ++    ++ ++D+ + 
Sbjct: 390 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 449

Query: 499 LLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKG-YGSVAIYNIIMGALH 558
           +L  +    L  + V    L     +E +I  A+++FR M  KG    V  +N ++  L 
Sbjct: 450 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 509

Query: 559 RYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAA 618
              + K AL +  DM S  +  ++ TY+  I+ F+  G+I+EA    N++V  GS     
Sbjct: 510 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 569

Query: 619 AYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNE 678
            Y SL +GL +  E+D    L    L +    P      + I  +C+SG  E  ++   E
Sbjct: 570 TYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVEEAVEFQKE 629

BLAST of Clc01G07960 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-41
Identity = 137/530 (25.85%), Postives = 241/530 (45.47%), Query Frame = 0

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
           ++ G   N  ++N     L    R+  A    E M  +G  P+   + IL++    A R 
Sbjct: 300 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 359

Query: 212 LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
              Y+V ++M K G  P V +YN ++D+ ++ G L+ A+ +       GL   S T+  L
Sbjct: 360 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 419

Query: 272 IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
           IKG CK G+ D    LL  M +     +  ++T+++ +L S    +  LR   EM +  +
Sbjct: 420 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 479

Query: 332 EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
            P      TLI GLCK G+  K  EL+ +   K  ++D     +L+    +  K+  A  
Sbjct: 480 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 539

Query: 392 LLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCV 451
           + K+++  G   D   Y++LI G C   ++D+A+      ++  LKPD  T   ++    
Sbjct: 540 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 599

Query: 452 EMRRMDD---FW---KLLTLLQKLELYVDNVLSKFLSFMVE---EEDKINTALDVFRGMN 511
            M ++++   FW   K   +L  +  Y         S M++   + ++     + F  M 
Sbjct: 600 NMNKVEEAIQFWDDCKRNGMLPDVYTY---------SVMIDGCCKAERTEEGQEFFDEMM 659

Query: 512 DKG-YGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQ 571
            K    +  +YN ++ A  R G+   ALE+  DMK   I P+S+TY+  I     + +++
Sbjct: 660 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 719

Query: 572 EACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALT 631
           EA L   ++   G  P+   Y +L +G  K+ ++  V  L+R+ + +    P +  Y + 
Sbjct: 720 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE-MHSKNVHPNKITYTVM 779

Query: 632 ILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKK 672
           I    + G       +LNEM ++     ++ Y   I G  K G + EA K
Sbjct: 780 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819

BLAST of Clc01G07960 vs. ExPASy Swiss-Prot
Match: Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-40
Identity = 148/630 (23.49%), Postives = 262/630 (41.59%), Query Frame = 0

Query: 107 WGPPVISELSKLR-RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNA 166
           WGP   + LS L  +  P+ V  VL    RR  +   A ++F W  ++    H   SYN+
Sbjct: 48  WGPSAENTLSALSFKPQPEFVIGVL----RRLKDVNRAIEYFRWYERRTELPHCPESYNS 107

Query: 167 FAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFG 226
               + R   F A DQI   M   G  PS      ++     AN+    Y V + M+KF 
Sbjct: 108 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 167

Query: 227 VVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEML 286
             P    Y  ++ A     H D+ L++++  QE G       F  LI+G  K GRVD  L
Sbjct: 168 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 227

Query: 287 ELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGL 346
            LL  M+++    D+  Y   +        ++   + + E++ + ++PD + Y ++I  L
Sbjct: 228 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 287

Query: 347 CKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADL 406
           CK  R+ +  E+F+ ++  R +     Y ++I  +    K   A  LL+     G    +
Sbjct: 288 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 347

Query: 407 GIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTL 466
             Y+ ++  L  + +VD+A K+F+  +++D  P+  T   ++ M     ++D  ++L   
Sbjct: 348 IAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 407

Query: 467 LQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDK--------------GYGSVA- 526
           +QK  L+ +      +   + +  K++ A  +F  M+ K              G G V  
Sbjct: 408 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 467

Query: 527 ---------------------IYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSI 586
                                +Y  ++     +G+ +   +IY DM + N  PD    + 
Sbjct: 468 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 527

Query: 587 AISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLV-----RD 646
            + C  + G+ ++      +I     VP A +Y  L  GL K    +    L      + 
Sbjct: 528 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 587

Query: 647 CLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYG 695
           C+ +  +      Y + I   CK GK      +L EM  +    + V Y ++I G++K  
Sbjct: 588 CVLDTRA------YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 647

BLAST of Clc01G07960 vs. ExPASy TrEMBL
Match: A0A0A0KRS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440110 PE=4 SV=1)

HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 651/729 (89.30%), Postives = 689/729 (94.51%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+P SPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPTSPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL  S S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSSTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSN ILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNSILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEES+TFMILIKGLCKAGRVDEMLELLARMRANLCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVL S++NLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VDKAYKLFQLTIREDLKPDFETVKPIMMM VE  RMDDFWKL++LLQKLE  VD+VLSKF
Sbjct: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMYVETGRMDDFWKLVSLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           LSFMVEEEDKI+ ALDVF GM DKGYGSVA+YN+++GALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LSFMVEEEDKISVALDVFHGMIDKGYGSVALYNVMVGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EP+S+TYSIA+ CFVE+GKIQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEI+AVM+
Sbjct: 541 EPNSTTYSIALLCFVEIGKIQEACASHNKIVELGSVPSIAAYCSLSEGLFKICEINAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLANIESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANIESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCVPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGTLDEAKKVFLHLRE +QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTLDEAKKVFLHLRERKQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Clc01G07960 vs. ExPASy TrEMBL
Match: A0A5D3BGR3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001290 PE=3 SV=1)

HSP 1 Score: 1310.0 bits (3389), Expect = 0.0e+00
Identity = 650/729 (89.16%), Postives = 686/729 (94.10%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+PISPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPISPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL  S S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSSTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRA LCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRATLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKV VS+ENLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVFVSKENLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCN+NQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLYKDLVDSGYRADLGIYHSLIKGLCNLNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           V KAYKLFQLTIREDLKPDFETVKPIMMM VEM RMDD WKL+TLLQKLE  VD+VLSKF
Sbjct: 421 VHKAYKLFQLTIREDLKPDFETVKPIMMMYVEMGRMDDLWKLVTLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           L FMVEEEDKI+ ALD+F GM DKGYGSVA+YN+IMGALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LCFMVEEEDKISVALDLFHGMIDKGYGSVALYNVIMGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPDS+TYSIA+ CFVE+GKI+EAC SHNKI+ELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDSTTYSIAVLCFVEIGKIREACASHNKIIELGSVPSMAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN+ESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANVESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCAPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGT +EAKKVFLHLRE  QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTFNEAKKVFLHLRERSQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Clc01G07960 vs. ExPASy TrEMBL
Match: A0A6J1FN51 (pentatricopeptide repeat-containing protein At4g20740 OS=Cucurbita moschata OX=3662 GN=LOC111445438 PE=4 SV=1)

HSP 1 Score: 1308.1 bits (3384), Expect = 0.0e+00
Identity = 648/728 (89.01%), Postives = 690/728 (94.78%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQIPSKP+KQYF+YGHRHRNP QHRPTVYGGLF+NRQSL+PPNP KPI PKPQPF L 
Sbjct: 1   MPPQIPSKPYKQYFFYGHRHRNPKQHRPTVYGGLFTNRQSLTPPNPDKPIYPKPQPFHLR 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD P +Q SNLTPSPSEAFFSS+LRLSPIARFIVDAFRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDRPFKQHSNLTPSPSEAFFSSALRLSPIARFIVDAFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGV+PRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVIPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKTG++DLALSVYRDFQENGLVEE+ITFMILIKGLCKAGRVDEMLELL RMRAN CKPDV
Sbjct: 241 VKTGNMDLALSVYRDFQENGLVEENITFMILIKGLCKAGRVDEMLELLGRMRANSCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVLVSEENLEGCLRVWDEM  DRVEPDVMAYGTLIIGLCKVGRV+K FELFQE
Sbjct: 301 FAYTAMVKVLVSEENLEGCLRVWDEMIADRVEPDVMAYGTLIIGLCKVGRVRKAFELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYGSLIEAFVQDEKVG+A DLLKDLVDSGYRADL IY SLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGLAFDLLKDLVDSGYRADLEIYDSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VD+AYKLF++TIREDLKPDF TVKPIM+  VE RRM+D WKLL+LLQKLEL +D+VLSKF
Sbjct: 421 VDRAYKLFRVTIREDLKPDFGTVKPIMIQYVETRRMEDLWKLLSLLQKLELSMDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           +S MVEEEDKI+TALDVFRG+ DKGYGSVAIYNI++GALHR+GQAKKALEIYNDMK+SNI
Sbjct: 481 MSLMVEEEDKISTALDVFRGLIDKGYGSVAIYNIVIGALHRHGQAKKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           +PD STYSI +SC+VEV +IQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 KPDPSTYSIVVSCYVEVEEIQEACASHNKIVELGSVPSVAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN ESGPLEFKYALTIL  CKSGKAEMVIDVLNEMVQQ CP+SAV YSAI+SGM
Sbjct: 601 LVRDCLANTESGPLEFKYALTILQACKSGKAEMVIDVLNEMVQQGCPVSAVTYSAIVSGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
            KYGT+D AKK FLHL+ESRQ+ EANCIVCEE+L++HMKKKTADLVRCGLKFFNLESKLK
Sbjct: 661 GKYGTIDGAKKAFLHLKESRQMREANCIVCEEVLVEHMKKKTADLVRCGLKFFNLESKLK 720

Query: 721 AKGSKLLS 729
           AKGSKLLS
Sbjct: 721 AKGSKLLS 728

BLAST of Clc01G07960 vs. ExPASy TrEMBL
Match: A0A6J1K1S7 (pentatricopeptide repeat-containing protein At4g20740 OS=Cucurbita maxima OX=3661 GN=LOC111489346 PE=4 SV=1)

HSP 1 Score: 1304.7 bits (3375), Expect = 0.0e+00
Identity = 645/728 (88.60%), Postives = 688/728 (94.51%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQIPSKP+KQYF+YGHRHRNP QHRPTVYGGLF+NRQSL+PPNP KPI+PKPQPF L 
Sbjct: 1   MPPQIPSKPYKQYFFYGHRHRNPKQHRPTVYGGLFTNRQSLTPPNPDKPITPKPQPFHLR 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD P +Q SNLTPSPSEAFFSS+LRLSPIARFIVDAFRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDRPFKQHSNLTPSPSEAFFSSALRLSPIARFIVDAFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGV+PRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVIPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKTG++DLALSVYRDFQENGLVEE+ITFMILIKGLCKAGRVDEMLE L RMRAN CKPDV
Sbjct: 241 VKTGNMDLALSVYRDFQENGLVEENITFMILIKGLCKAGRVDEMLEFLGRMRANSCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVL+SEENLEGCLRVWDEM+ DRVEPDVMAYGTLI GLCKVG VQK FELFQE
Sbjct: 301 FAYTAMVKVLISEENLEGCLRVWDEMRADRVEPDVMAYGTLITGLCKVGWVQKAFELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYGSLIEAFVQDEKVG+A DLLKDL+DSGYRADLGIY SLIKGLCN NQ
Sbjct: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGLAFDLLKDLIDSGYRADLGIYDSLIKGLCNENQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VD+AYKLF++TIREDLKPDF TVKPIM+  VE RRM+D WKLL+LLQKLEL +D+VL K 
Sbjct: 421 VDRAYKLFRVTIREDLKPDFGTVKPIMIQYVETRRMEDLWKLLSLLQKLELSMDDVLFKL 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           +S MVEEEDKI+TALDVFRG+ DKGYGSVAIYNI++GALHR+GQAKKALEIYNDMKSSNI
Sbjct: 481 MSLMVEEEDKISTALDVFRGLIDKGYGSVAIYNIVIGALHRHGQAKKALEIYNDMKSSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPD STYSI +SC+VEV +IQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDPSTYSIVVSCYVEVEQIQEACASHNKIVELGSVPSMAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN ESGPLEFKYALTIL  CKSGKAEMVIDVLNEMVQQ CP+SAVAYSAI+SGM
Sbjct: 601 LVRDCLANTESGPLEFKYALTILQACKSGKAEMVIDVLNEMVQQGCPVSAVAYSAIVSGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
            KYGT++ AK VFLHL+ESRQ+ EANCIVCEELL++HMKKKTADLVRCGLKFFNLESKLK
Sbjct: 661 GKYGTIEGAKSVFLHLKESRQMREANCIVCEELLVEHMKKKTADLVRCGLKFFNLESKLK 720

Query: 721 AKGSKLLS 729
           AKGSKLLS
Sbjct: 721 AKGSKLLS 728

BLAST of Clc01G07960 vs. ExPASy TrEMBL
Match: A0A1S4DS81 (pentatricopeptide repeat-containing protein At4g20740 OS=Cucumis melo OX=3656 GN=LOC103503395 PE=3 SV=1)

HSP 1 Score: 1303.9 bits (3373), Expect = 0.0e+00
Identity = 647/729 (88.75%), Postives = 684/729 (93.83%), Query Frame = 0

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+PISPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPISPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL    S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPV+SEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSFTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVLSELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDA RGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDAYRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRA LCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRATLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKV VS+ENLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVFVSKENLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCN+NQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLYKDLVDSGYRADLGIYHSLIKGLCNLNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           V KAYKLFQLTIREDLKPDFETVKPIMMM VEM RMDD WKL+TLLQKLE  VD+VLSKF
Sbjct: 421 VHKAYKLFQLTIREDLKPDFETVKPIMMMYVEMGRMDDLWKLVTLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           L FMVEEEDKI+ ALD+F GM DKGYGSVA+YN+IMGALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LCFMVEEEDKISVALDLFHGMIDKGYGSVALYNVIMGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPDS+TYSIA+ CFVE+GKI+EAC SHNKI+ELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDSTTYSIAVLCFVEIGKIREACASHNKIIELGSVPSMAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN+ESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANVESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCAPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGT +EAKKVFLHLRE  QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTFNEAKKVFLHLRERSQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Clc01G07960 vs. TAIR 10
Match: AT4G20740.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 882.9 bits (2280), Expect = 1.8e-256
Identity = 449/728 (61.68%), Postives = 562/728 (77.20%), Query Frame = 0

Query: 2   PPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLS--PPNPHKPISPKPQPFLL 61
           PP +  K  K  F++G  HR P+Q+RPTVYGGLFSNRQS+    P P         PF L
Sbjct: 6   PPNLSDKSLKPNFFHG--HRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTPFDL 65

Query: 62  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 121
             WDP+      S   PS S    ++S RLSPIARF++DAFRKN+N WGP V+SEL+KLR
Sbjct: 66  RKWDPETHLPPPS--PPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLR 125

Query: 122 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 181
           RVTP +VAEVLK      ++  +A+KFFHWAGKQKG+ H+FA+YNAFAYCLNR+  FRAA
Sbjct: 126 RVTPSIVAEVLKLG----NDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAA 185

Query: 182 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 241
           DQ+PELMDSQG+PPSEKQFEILIRMH D  RGLRVYYVYEKMKKFG  PRVFLYNRI+DA
Sbjct: 186 DQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDA 245

Query: 242 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 301
           LVK G+ DLAL+VY DF+E+GLVEES TFMIL+KGLCKAGR++EMLE+L RMR NLCKPD
Sbjct: 246 LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD 305

Query: 302 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 361
           VFAYTAM+K LVSE NL+  LRVWDEM+ D ++PDVMAYGTL++GLCK GRV++G+ELF 
Sbjct: 306 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFM 365

Query: 362 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 421
           EMKGK+ILIDR IY  LIE FV D KV  AC+L +DLVDSGY AD+GIY+++IKGLC+VN
Sbjct: 366 EMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVN 425

Query: 422 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWKLLTLLQKLELYVDNVLSK 481
           QVDKAYKLFQ+ I E+L+PDFET+ PIM+  V M R+ DF  +L  + +L   V + L++
Sbjct: 426 QVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQ 485

Query: 482 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 541
           F   +  +E+K   ALDVF  +  KG+GSV++YNI+M AL++ G  +K+L ++ +M+   
Sbjct: 486 FFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLG 545

Query: 542 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 601
            EPDSS+YSIAI CFVE G ++ AC  H KI+E+  VPS AAY SL++GL +I EIDAVM
Sbjct: 546 FEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVM 605

Query: 602 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 661
           LLVR+CL N+ESGP+EFKYALT+ HVCK   AE V+ V++EM Q+   ++ V Y AIISG
Sbjct: 606 LLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISG 665

Query: 662 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 721
           MSK+GT+  A++VF  L++ + +TEA+ +V EE+LI+  KKKTADLV  G+KFF LESKL
Sbjct: 666 MSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKL 725

Query: 722 KAKGSKLL 728
           +AKG +LL
Sbjct: 726 RAKGCRLL 725

BLAST of Clc01G07960 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-43
Identity = 164/661 (24.81%), Postives = 291/661 (44.02%), Query Frame = 0

Query: 97  VDAFR---KNQNQWGPPVISELSKLRRVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQ 156
           VDA +   + +  W   + SEL   RR+    V E+L  +     +P L  +FF++ G  
Sbjct: 42  VDAVKRIVRGKRSWEIALSSELVS-RRLKTVHVEEILIGT---IDDPKLGLRFFNFLGLH 101

Query: 157 KGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSE-----------------K 216
           +GF H+ AS+    + L + N F  A  + + +  +   PS+                  
Sbjct: 102 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 161

Query: 217 QFEILIRMHCDANRGLRVYYVYEKM-KKFGVVPRVFLYNRILDALVKTGHLDLALSVYRD 276
            F++LI+ +  + R L    V++ M  K  ++P V   + +L  LVK  H  LA+ ++ D
Sbjct: 162 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 221

Query: 277 FQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEEN 336
               G+  +   +  +I+ LC+   +    E++A M A  C  ++  Y  ++  L  ++ 
Sbjct: 222 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 281

Query: 337 LEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGS 396
           +   + +  ++    ++PDV+ Y TL+ GLCKV   + G E+  EM   R     A   S
Sbjct: 282 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 341

Query: 397 LIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIRED 456
           L+E   +  K+  A +L+K +VD G   +L +Y++LI  LC   +  +A  LF    +  
Sbjct: 342 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 401

Query: 457 LKPDFETVKPIMMMCVEMRRMDDFWKLLTLL----QKLELYVDNVL----SKFLSFMVEE 516
           L+P+  T   ++ M     ++D     L  +     KL +Y  N L     KF      E
Sbjct: 402 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 461

Query: 517 EDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTY 576
                        +N K   +V  Y  +MG     G+  KAL +Y++M    I P   T+
Sbjct: 462 GFMAEM-------INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 521

Query: 577 SIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLA 636
           +  +S     G I++A    N++ E    P+   Y  + EG  +  ++      +++   
Sbjct: 522 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM-- 581

Query: 637 NIESG--PLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGT 696
             E G  P  + Y   I  +C +G+A      ++ + + +C L+ + Y+ ++ G  + G 
Sbjct: 582 -TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 641

Query: 697 LDEAKKVFLHLRESRQLTEANCIVCEELLID-HMKKKTADLVRCGLKFFNLESKLKAKGS 726
           L+EA  V    +E  Q      +VC  +LID  +K K   L      FF L  ++  +G 
Sbjct: 642 LEEALSV---CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL------FFGLLKEMHDRGL 679

BLAST of Clc01G07960 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 3.2e-43
Identity = 143/577 (24.78%), Postives = 252/577 (43.67%), Query Frame = 0

Query: 139 NPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELM------------ 198
           N   + + F W G Q G+ H+F  Y      L  +  F+  D++   M            
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 199 -------DSQGKP-----------------PSEKQFEILIRMHCDANRGLRVYYVYEKMK 258
                  D  G P                 P+ K + +++ +    N       V+  M 
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209

Query: 259 KFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVD 318
              + P +F +  ++ A      +D ALS+ RD  ++G V  S+ +  LI  L K  RV+
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269

Query: 319 EMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLI 378
           E L+LL  M    C PD   +  ++  L   + +    ++ + M +    PD + YG L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329

Query: 379 IGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDS-GY 438
            GLCK+GRV    +LF  +    I+    I+ +LI  FV   ++  A  +L D+V S G 
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 389

Query: 439 RADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVEMRRMDDFWK 498
             D+  Y+SLI G      V  A ++      +  KP+  +   ++    ++ ++D+ + 
Sbjct: 390 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 449

Query: 499 LLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKG-YGSVAIYNIIMGALH 558
           +L  +    L  + V    L     +E +I  A+++FR M  KG    V  +N ++  L 
Sbjct: 450 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 509

Query: 559 RYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAA 618
              + K AL +  DM S  +  ++ TY+  I+ F+  G+I+EA    N++V  GS     
Sbjct: 510 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 569

Query: 619 AYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNE 678
            Y SL +GL +  E+D    L    L +    P      + I  +C+SG  E  ++   E
Sbjct: 570 TYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVEEAVEFQKE 629

BLAST of Clc01G07960 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 172.9 bits (437), Expect = 9.2e-43
Identity = 137/530 (25.85%), Postives = 241/530 (45.47%), Query Frame = 0

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
           ++ G   N  ++N     L    R+  A    E M  +G  P+   + IL++    A R 
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346

Query: 212 LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
              Y+V ++M K G  P V +YN ++D+ ++ G L+ A+ +       GL   S T+  L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406

Query: 272 IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
           IKG CK G+ D    LL  M +     +  ++T+++ +L S    +  LR   EM +  +
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466

Query: 332 EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
            P      TLI GLCK G+  K  EL+ +   K  ++D     +L+    +  K+  A  
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526

Query: 392 LLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCV 451
           + K+++  G   D   Y++LI G C   ++D+A+      ++  LKPD  T   ++    
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586

Query: 452 EMRRMDD---FW---KLLTLLQKLELYVDNVLSKFLSFMVE---EEDKINTALDVFRGMN 511
            M ++++   FW   K   +L  +  Y         S M++   + ++     + F  M 
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTY---------SVMIDGCCKAERTEEGQEFFDEMM 646

Query: 512 DKG-YGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQ 571
            K    +  +YN ++ A  R G+   ALE+  DMK   I P+S+TY+  I     + +++
Sbjct: 647 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 706

Query: 572 EACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALT 631
           EA L   ++   G  P+   Y +L +G  K+ ++  V  L+R+ + +    P +  Y + 
Sbjct: 707 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE-MHSKNVHPNKITYTVM 766

Query: 632 ILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKK 672
           I    + G       +LNEM ++     ++ Y   I G  K G + EA K
Sbjct: 767 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806

BLAST of Clc01G07960 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 172.9 bits (437), Expect = 9.2e-43
Identity = 137/530 (25.85%), Postives = 241/530 (45.47%), Query Frame = 0

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
           ++ G   N  ++N     L    R+  A    E M  +G  P+   + IL++    A R 
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346

Query: 212 LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
              Y+V ++M K G  P V +YN ++D+ ++ G L+ A+ +       GL   S T+  L
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406

Query: 272 IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
           IKG CK G+ D    LL  M +     +  ++T+++ +L S    +  LR   EM +  +
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466

Query: 332 EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
            P      TLI GLCK G+  K  EL+ +   K  ++D     +L+    +  K+  A  
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526

Query: 392 LLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCV 451
           + K+++  G   D   Y++LI G C   ++D+A+      ++  LKPD  T   ++    
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586

Query: 452 EMRRMDD---FW---KLLTLLQKLELYVDNVLSKFLSFMVE---EEDKINTALDVFRGMN 511
            M ++++   FW   K   +L  +  Y         S M++   + ++     + F  M 
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTY---------SVMIDGCCKAERTEEGQEFFDEMM 646

Query: 512 DKG-YGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQ 571
            K    +  +YN ++ A  R G+   ALE+  DMK   I P+S+TY+  I     + +++
Sbjct: 647 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 706

Query: 572 EACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALT 631
           EA L   ++   G  P+   Y +L +G  K+ ++  V  L+R+ + +    P +  Y + 
Sbjct: 707 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE-MHSKNVHPNKITYTVM 766

Query: 632 ILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKK 672
           I    + G       +LNEM ++     ++ Y   I G  K G + EA K
Sbjct: 767 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906442.10.0e+0093.28pentatricopeptide repeat-containing protein At4g20740 [Benincasa hispida][more]
XP_023551127.10.0e+0089.42pentatricopeptide repeat-containing protein At4g20740 [Cucurbita pepo subsp. pep... [more]
KAG7016643.10.0e+0089.56Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_004140286.10.0e+0089.30pentatricopeptide repeat-containing protein At4g20740 [Cucumis sativus] >KGN5109... [more]
KAA0050180.10.0e+0089.16pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ98226... [more]
Match NameE-valueIdentityDescription
Q9SVH32.5e-25561.68Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana OX... [more]
Q9FJE62.0e-4224.81Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... [more]
Q9FMF64.4e-4224.78Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q940A61.3e-4125.85Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... [more]
Q9M9074.2e-4023.49Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KRS50.0e+0089.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G440110 PE=4 SV=1[more]
A0A5D3BGR30.0e+0089.16Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1FN510.0e+0089.01pentatricopeptide repeat-containing protein At4g20740 OS=Cucurbita moschata OX=3... [more]
A0A6J1K1S70.0e+0088.60pentatricopeptide repeat-containing protein At4g20740 OS=Cucurbita maxima OX=366... [more]
A0A1S4DS810.0e+0088.75pentatricopeptide repeat-containing protein At4g20740 OS=Cucumis melo OX=3656 GN... [more]
Match NameE-valueIdentityDescription
AT4G20740.11.8e-25661.68Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G59900.11.4e-4324.81Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.13.2e-4324.78Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G19440.19.2e-4325.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G19440.29.2e-4325.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 132..292
e-value: 2.6E-29
score: 104.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 475..612
e-value: 1.8E-19
score: 72.3
coord: 613..722
e-value: 2.4E-9
score: 39.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 293..363
e-value: 9.6E-20
score: 72.9
coord: 364..433
e-value: 1.3E-10
score: 43.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 626..646
e-value: 0.62
score: 10.4
coord: 407..430
e-value: 0.01
score: 16.0
coord: 372..400
e-value: 1.0
score: 9.7
coord: 651..679
e-value: 0.021
score: 15.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 228..277
e-value: 5.8E-9
score: 36.0
coord: 298..347
e-value: 1.6E-10
score: 41.0
coord: 508..554
e-value: 9.7E-13
score: 48.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 266..300
e-value: 7.3E-8
score: 30.1
coord: 232..262
e-value: 1.3E-4
score: 19.9
coord: 511..544
e-value: 1.9E-6
score: 25.7
coord: 407..439
e-value: 1.1E-5
score: 23.2
coord: 337..369
e-value: 8.1E-7
score: 26.8
coord: 302..335
e-value: 1.0E-5
score: 23.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..438
score: 10.347525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..298
score: 11.509422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 10.829822
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 508..542
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 543..577
score: 9.032168
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 9.876189
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 649..679
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 229..263
score: 9.361008
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..79
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 5..713
NoneNo IPR availablePANTHERPTHR47932:SF10OS07G0179000 PROTEINcoord: 5..713

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G07960.2Clc01G07960.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding