Clc01G07750 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G07750
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTRAF-like family protein
LocationClcChr01: 7851843 .. 7853704 (+)
RNA-Seq ExpressionClc01G07750
SyntenyClc01G07750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCACTTGCAACTTCCTATCCTTATAGATATGAATCCAAATCTTCAAAGCAGGAGGTTTTAAATGGTGGGTTTAATATATATTCTTCATTAAATATTATTTAAATGTATATAATTTGATTTTATATTAATTGTAGGAAATTAGCTTTGTATCCGAATGGAGATGTCACAACATCAACATCAAATGACGAATATGATCGTCATATATCCCTTTATTTGGTATCAGCTGAAGATGACATTTCATCATATGGTTTAGAGATTAATGTTATGATTACATTTCTTGTTTATGGTAATCTCAAAGACAAGTATTGGAGCATACAAGGTAATATATTCTCAAATTGATTTATTATAGCTTTAGTTTCGAATTTTGACTCGACGGTAATTGACATGCAAATAGAAAGGTAAAACGCTTTGTAATGAAGAAAGAGTGGGGATTTAATAAGTTGATTTCACTATTCAATTTATATGGAGCTTCAAATGGATTTTTGGTTAATGATTGTTGTGCATTTTGAGTTGACATTTTTGTTATGGACTTTAATAATAAGAATGATGGGAAGAAAGGGGAGATTCTTTCCTTGATCAAACAACCAACAAATTACTATCATTCATGGAAATTCACCAACTTTTCTCTACTAAATAAGGATCATTACGAATCTCAACCTTTTACCGTCCAGGGCTACAATTGGTATGTAAAAAACTTTTTATTATTATTATTATTATACAATTATACAATTATGCAGCTAAATTATAACAAATATCTCTCAATTTTGTTATTTGTTTCAATAATATTCTCTTTACTACTTTTAAAATTGTAATATTACTTCTCAACTTTCTTTTGGAATTTCAAAGATTTGGAATTGTGTTGTGATAATTAAAATTATGTTGTGATCTAAATTTTCATAGTTTCATATCTCAATTTTTGTGCAAAATTATTCTAAAGTATTTCTATTCTAAGGGTATTTTAAAAATGTTTATGAAAGTTGCAACTTTTGAAAGTCATTAGGGTATTTTTTAAACAAATGACGAAGCTAAGAGACTTTTTTTTAAATTTTTATTTTAATTATAGCAAATATCATTTAGCTTTGCCATTTGTTCAAAAAAATATCTATACTTCTAAAATGACAATATTGCCCATCAACTTTCTTTTGGAATTTCGAGATAATCTAACATGATGTCTTTGATTTAAATTTTCCTTATAGGGTCATTCTTACGCAATTTTATTATTTCATATCTCAATTTTTGTGCAAAATTCTAAAGATTTATTGTTCTAAGGATATTTTTGAAATATTTATGAAAGTTAAAGAGTAATATTACAATTTTTGAAAGTATCGTGGTACATTTTAAACAAATGACAAAATTCAAAAGACATTTTTTTTATATAATTTAACCTATATATATATTTAGTGTAATCTATATATATATATATGATGAATTCCTTTAGGAAAATACTCCTATATCCAAGAGGATTTTGCTGCAAAAAGGCAGGTGGATGTTTGTCCTTGTACCTCCACCTTCAAAGTTTCAGGGAGCTTCCTCAAAATTTTCAAGTTTATGTTGAATATGAGATGGCTGTCTTGAGCCAACTTGGAGTTGAAACAAAGAGAAAAACAAGTAATTAATTTTTACCTTAATTTATGCAAACTAAATCATTATATATATATATATATATATATTATTATTGTTTTTGTTTTGTTGCAGATAGATGTGGGTATGGTGTTAAACAATGGAGCTCGGGATTCTCGGAGTTCATGACATTGAATGATCTGATGAAACCAACCAAACACTTTCTTCATAATGATACTCTCAGAGTTGAAGTCAAAATTAATAAGATATCCGCCTTGGAAACACTAGTTTATTAG

mRNA sequence

ATGGCTGCACTTGCAACTTCCTATCCTTATAGATATGAATCCAAATCTTCAAAGCAGGAGGTTTTAAATGGTGGGAAATTAGCTTTGTATCCGAATGGAGATGTCACAACATCAACATCAAATGACGAATATGATCGTCATATATCCCTTTATTTGAATGATGGGAAGAAAGGGGAGATTCTTTCCTTGATCAAACAACCAACAAATTACTATCATTCATGGAAATTCACCAACTTTTCTCTACTAAATAAGGATCATTACGAATCTCAACCTTTTACCGTCCAGGGCTACAATTGGAAAATACTCCTATATCCAAGAGGATTTTGCTGCAAAAAGGCAGGTGGATGTTTGTCCTTGTACCTCCACCTTCAAAGTTTCAGGGAGCTTCCTCAAAATTTTCAAGTTTATGTTGAATATGAGATGGCTGTCTTGAGCCAACTTGGAGTTGAAACAAAGAGAAAAACAAATAGATGTGGGTATGGTGTTAAACAATGGAGCTCGGGATTCTCGGAGTTCATGACATTGAATGATCTGATGAAACCAACCAAACACTTTCTTCATAATGATACTCTCAGAGTTGAAGTCAAAATTAATAAGATATCCGCCTTGGAAACACTAGTTTATTAG

Coding sequence (CDS)

ATGGCTGCACTTGCAACTTCCTATCCTTATAGATATGAATCCAAATCTTCAAAGCAGGAGGTTTTAAATGGTGGGAAATTAGCTTTGTATCCGAATGGAGATGTCACAACATCAACATCAAATGACGAATATGATCGTCATATATCCCTTTATTTGAATGATGGGAAGAAAGGGGAGATTCTTTCCTTGATCAAACAACCAACAAATTACTATCATTCATGGAAATTCACCAACTTTTCTCTACTAAATAAGGATCATTACGAATCTCAACCTTTTACCGTCCAGGGCTACAATTGGAAAATACTCCTATATCCAAGAGGATTTTGCTGCAAAAAGGCAGGTGGATGTTTGTCCTTGTACCTCCACCTTCAAAGTTTCAGGGAGCTTCCTCAAAATTTTCAAGTTTATGTTGAATATGAGATGGCTGTCTTGAGCCAACTTGGAGTTGAAACAAAGAGAAAAACAAATAGATGTGGGTATGGTGTTAAACAATGGAGCTCGGGATTCTCGGAGTTCATGACATTGAATGATCTGATGAAACCAACCAAACACTTTCTTCATAATGATACTCTCAGAGTTGAAGTCAAAATTAATAAGATATCCGCCTTGGAAACACTAGTTTATTAG

Protein sequence

MAALATSYPYRYESKSSKQEVLNGGKLALYPNGDVTTSTSNDEYDRHISLYLNDGKKGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTKHFLHNDTLRVEVKINKISALETLVY
Homology
BLAST of Clc01G07750 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 152.1 bits (383), Expect = 5.1e-33
Identity = 83/160 (51.88%), Postives = 100/160 (62.50%), Query Frame = 0

Query: 54  DGKKGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKA 113
           DG  GE+ SLIKQP NY ++WK  NFS L     ES PFTV+ Y WKILLYP G C K  
Sbjct: 177 DGGMGEVFSLIKQPKNYEYTWKLNNFSQLGSTLKESNPFTVESYRWKILLYPSG-CSKAK 236

Query: 114 GGCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGV------KQWSS 173
            G LS+YL   S  +LPQ  QVYVEYEMA+LSQL     ++T  C +G       + W  
Sbjct: 237 SGFLSMYLLFDSSNQLPQGSQVYVEYEMAILSQLEAVPVKETYNCWFGFDGVEAGRGW-- 296

Query: 174 GFSEFMTLNDLMKPTKHFLHNDTLRVEVKINKISALETLV 208
           G   F +L+DL +PTK +L NDTL  EVKIN IS L+ +V
Sbjct: 297 GAPNFSSLSDLEEPTKGYLLNDTLVTEVKINVISTLKKIV 333

BLAST of Clc01G07750 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-29
Identity = 81/153 (52.94%), Postives = 100/153 (65.36%), Query Frame = 0

Query: 59  EILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLS 118
           EILSLIKQ  NY ++WK  NFS L+K+ YES PFTV  Y WKI LYPRG       G +S
Sbjct: 184 EILSLIKQLKNYKYTWKINNFSQLSKNVYESDPFTVDNYTWKIELYPRGDSLAMT-GYMS 243

Query: 119 LYLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGVKQW------SSGFSEF 178
           ++L   SF +LPQ  +VYVEY++AVLSQLG      TN   Y VK W      S GF  F
Sbjct: 244 MFLRFDSFEKLPQGSRVYVEYDIAVLSQLG---GAYTN---YPVKHWFDGETKSWGFGNF 303

Query: 179 MTLNDLMKPTKHFLHNDTLRVEVKINKISALET 206
           M+L+++ +P K FL +DTL VEVKIN IS L++
Sbjct: 304 MSLSNVKEPMKGFLCDDTLMVEVKINVISILKS 329

BLAST of Clc01G07750 vs. NCBI nr
Match: XP_022146380.1 (probable inactive serine/threonine-protein kinase fnkC [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 8.5e-28
Identity = 97/272 (35.66%), Postives = 130/272 (47.79%), Query Frame = 0

Query: 2   AALATSYPYRYESKSSKQEVLNGG----KLALYPNGDVTTSTSNDEYDRHISLYL----- 61
           AALA+S   RYES     ++ N G    KLA+YPNGDV  + ++     HISLYL     
Sbjct: 32  AALASSNRDRYES-----QIFNAGGYKWKLAVYPNGDVKRNGAD-----HISLYLVKADD 91

Query: 62  -------------------------------NDGK----------------------KGE 121
                                          ND                        KGE
Sbjct: 92  DINPCSHGKVRRFHAMKAEWGFEKLISLDTFNDSSNGFVVGDCCGFGVDVVVMKCDGKGE 151

Query: 122 ILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSL 181
           ++S IK+P ++ ++WK  NFS L+K  YES PFTV+GY WK+ LYP+G   K   G LSL
Sbjct: 152 VVSFIKEPKSHKYTWKTKNFSQLDKKFYESDPFTVEGYRWKLWLYPKG-SSKAKTGFLSL 211

Query: 182 YLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGVKQWSS----GFSEFMTL 208
           YL   S+ E+PQ  QVYVEYE              ++ C +G     S    G   F++L
Sbjct: 212 YLSYNSYEEIPQGSQVYVEYE-------------DSHNCWFGFGGVESGRGWGHPNFLSL 271

BLAST of Clc01G07750 vs. NCBI nr
Match: XP_031742213.1 (MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 5.5e-27
Identity = 76/160 (47.50%), Postives = 99/160 (61.88%), Query Frame = 0

Query: 53  NDGKKGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKK 112
           +D  KGE+ SLI+QP NY ++WK  NFS L+    E  PFTV+   WKI L+P G    K
Sbjct: 82  SDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLRECNPFTVENCCWKIRLFPSGDLQAK 141

Query: 113 AGGCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQL-GVETKRKTNRCGYGV----KQWSS 172
             G  S+YL L + +E PQ  QVYVEYEMAVLSQL  V   ++T  C +G          
Sbjct: 142 P-GFFSMYLMLTNLKEFPQGAQVYVEYEMAVLSQLEDVPPIKETYICWFGFGGIEADKGC 201

Query: 173 GFSEFMTLNDLMKPTKHFLHNDTLRVEVKINKISALETLV 208
           G S F++L+DL +P + +L NDTL +EVKIN IS L+ +V
Sbjct: 202 GASNFLSLSDLKEPARGYLLNDTLVIEVKINVISTLKKIV 240

BLAST of Clc01G07750 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 5.5e-27
Identity = 76/160 (47.50%), Postives = 99/160 (61.88%), Query Frame = 0

Query: 53  NDGKKGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKK 112
           +D  KGE+ SLI+QP NY ++WK  NFS L+    E  PFTV+   WKI L+P G    K
Sbjct: 179 SDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLRECNPFTVENCCWKIRLFPSGDLQAK 238

Query: 113 AGGCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQL-GVETKRKTNRCGYGV----KQWSS 172
             G  S+YL L + +E PQ  QVYVEYEMAVLSQL  V   ++T  C +G          
Sbjct: 239 P-GFFSMYLMLTNLKEFPQGAQVYVEYEMAVLSQLEDVPPIKETYICWFGFGGIEADKGC 298

Query: 173 GFSEFMTLNDLMKPTKHFLHNDTLRVEVKINKISALETLV 208
           G S F++L+DL +P + +L NDTL +EVKIN IS L+ +V
Sbjct: 299 GASNFLSLSDLKEPARGYLLNDTLVIEVKINVISTLKKIV 337

BLAST of Clc01G07750 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-14
Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 0

Query: 65  KQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQ 124
           + P     +W   NFS  N   + S  F V GY W+IL++P+G         LS+YL + 
Sbjct: 50  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVS 109

Query: 125 SFRELPQNFQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTK 184
               LP  +  Y ++ +AV++Q+    T RK  +  +  ++   GF+ FM L++L  P++
Sbjct: 110 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSR 169

Query: 185 HFLHNDTLRVEVKI 198
            +L NDT+ VE ++
Sbjct: 170 GYLVNDTVLVEAEV 179

BLAST of Clc01G07750 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13
Identity = 40/134 (29.85%), Postives = 73/134 (54.48%), Query Frame = 0

Query: 65  KQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQ 124
           + P +   +W    F+ LN   + S  F V GY W+IL++P+G         LS+YL + 
Sbjct: 49  EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVA 108

Query: 125 SFRELPQNFQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTK 184
               LP  +  Y ++ +AV++Q+    + RK  +  +  ++   GF+ FM L++L +PT+
Sbjct: 109 DAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTR 168

Query: 185 HFLHNDTLRVEVKI 198
            +L NDT+ +E ++
Sbjct: 169 GYLVNDTVLIEAEV 178

BLAST of Clc01G07750 vs. ExPASy Swiss-Prot
Match: Q9M2H9 (MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis thaliana OX=3702 GN=At3g58370 PE=4 SV=3)

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-11
Identity = 39/135 (28.89%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 73  SWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQSFRELPQN 132
           +W   NFS L  D   S PF + G  W +L YP+G    K    LSLYL +   R LP  
Sbjct: 11  TWVIKNFSTLQYDKIYSDPFVIGGCKWHLLAYPKG---NKFNNSLSLYLVVDDARALPCG 70

Query: 133 FQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTKHFLHNDTL 192
           ++ Y ++ + +++QL  + ++R   +  +  +   SGF+  + L +L      +L N  +
Sbjct: 71  WRRYAQFSLTIINQLTDKLSQRGEKQNWFNQRNLGSGFTSMIPLPNLHAKNAGYLVNGEV 130

Query: 193 RVEVKINKISALETL 207
           ++ V+IN +  +  L
Sbjct: 131 KIVVEINDLEVIGKL 142

BLAST of Clc01G07750 vs. ExPASy Swiss-Prot
Match: Q9C870 (MATH domain and coiled-coil domain-containing protein At1g31390 OS=Arabidopsis thaliana OX=3702 GN=At1g31390 PE=4 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 8.3e-10
Identity = 34/132 (25.76%), Postives = 67/132 (50.76%), Query Frame = 0

Query: 73  SWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQSFRELPQN 132
           +W   NFS +     +S  F V    W ++ YP+G   +    CLSLYL++  F+ LP  
Sbjct: 10  TWTIKNFSFVQSQAIDSDIFVVGDSKWHLVAYPKG-NGESTNKCLSLYLNVADFQSLPNG 69

Query: 133 FQVYVEYEMAVLSQLGVETKRKTNRCGYGVKQWS-SGFSEFMTLNDLMKPTKHFLHNDTL 192
           ++ +++Y + V++Q+  +   +    G+  K +  SGF   + L+ L+     FL N  +
Sbjct: 70  WKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNGGFLVNGDV 129

Query: 193 RVEVKINKISAL 204
           ++ V++  +  +
Sbjct: 130 KIVVEVGVLEVV 140

BLAST of Clc01G07750 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.5e-08
Identity = 38/135 (28.15%), Postives = 62/135 (45.93%), Query Frame = 0

Query: 73  SWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQSFRELPQN 132
           +W   NFS        S  F + G  W++L+YP GF   K+G  LSL+L +   R LP  
Sbjct: 10  TWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGF--NKSGDHLSLFLEVADPRSLPPG 69

Query: 133 FQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTKHFLHNDTL 192
           +  +  Y + +++Q   + +KR      +  K    G S  + L  L      FL ND L
Sbjct: 70  WSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDEL 129

Query: 193 RVEVKINKISALETL 207
           ++  ++N +  +  L
Sbjct: 130 KIVAEVNVLEVIGKL 142

BLAST of Clc01G07750 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-28
Identity = 97/272 (35.66%), Postives = 130/272 (47.79%), Query Frame = 0

Query: 2   AALATSYPYRYESKSSKQEVLNGG----KLALYPNGDVTTSTSNDEYDRHISLYL----- 61
           AALA+S   RYES     ++ N G    KLA+YPNGDV  + ++     HISLYL     
Sbjct: 32  AALASSNRDRYES-----QIFNAGGYKWKLAVYPNGDVKRNGAD-----HISLYLVKADD 91

Query: 62  -------------------------------NDGK----------------------KGE 121
                                          ND                        KGE
Sbjct: 92  DINPCSHGKVRRFHAMKAEWGFEKLISLDTFNDSSNGFVVGDCCGFGVDVVVMKCDGKGE 151

Query: 122 ILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSL 181
           ++S IK+P ++ ++WK  NFS L+K  YES PFTV+GY WK+ LYP+G   K   G LSL
Sbjct: 152 VVSFIKEPKSHKYTWKTKNFSQLDKKFYESDPFTVEGYRWKLWLYPKG-SSKAKTGFLSL 211

Query: 182 YLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGVKQWSS----GFSEFMTL 208
           YL   S+ E+PQ  QVYVEYE              ++ C +G     S    G   F++L
Sbjct: 212 YLSYNSYEEIPQGSQVYVEYE-------------DSHNCWFGFGGVESGRGWGHPNFLSL 271

BLAST of Clc01G07750 vs. ExPASy TrEMBL
Match: A0A6J1CXZ0 (ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=LOC111015607 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.1e-23
Identity = 89/242 (36.78%), Postives = 120/242 (49.59%), Query Frame = 0

Query: 3   ALATSYPYRYESKSSKQEVLNGG----KLALYPNGDVTTSTSNDEYDRHISLYL------ 62
           AL  S   RYES+     + N G    KLA+YP GDV  + S+D    HISLYL      
Sbjct: 48  ALVRSDCDRYESR-----IFNAGGYKWKLAMYPTGDVKRNGSHD----HISLYLVKAEDD 107

Query: 63  --------------NDGKKGEILSLIKQPTNYYHS----WKFTNFSLLNKDHYESQPFTV 122
                          D  K + L++       +H+    W F     L+  +  S  F V
Sbjct: 108 IPTSEVNVVFTFLVYDSLKDKYLAVQDGIVRRFHAIKTEWGFEKLISLDTFNDSSNGFLV 167

Query: 123 ---------------QGYNWKILLYPRGFCCKKAGGCLSLYLHLQSFRELPQNFQVYVEY 182
                          +GY WK+ LYP+G C     G LSLYL L S +E+ Q  +VYVEY
Sbjct: 168 DDCCAFGVDVVVMKLEGYRWKLWLYPKG-CSNAETGFLSLYLILDSSKEILQGSKVYVEY 227

Query: 183 EMAVLSQLGVETKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTKHFLHNDTLRVEVKINK 202
           E+A+LSQLG E +++T    +     + G   F++L++L KP K +LHNDTL+VEVKIN 
Sbjct: 228 ELALLSQLGAEPEKETYNYWF-----AGGGPNFISLSELKKPLKGYLHNDTLKVEVKINV 274

BLAST of Clc01G07750 vs. ExPASy TrEMBL
Match: A0A1S3CQ20 (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 74/157 (47.13%), Postives = 97/157 (61.78%), Query Frame = 0

Query: 56  KKGEILSLIKQPTNYYHSWKFTNFS-LLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAG 115
           +KGE+ SLIKQP NY ++WK  NFS LL+   +E   F V+   WKI L+P G    K  
Sbjct: 186 EKGEVFSLIKQPNNYKYTWKLDNFSKLLDCSFWECNSFRVENCWWKIRLFPSGDWQAKP- 245

Query: 116 GCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQL-GVETKRKTNRCGYG---VKQWSS-GF 175
           G  S+YL L +    P+  QVYVEYEMAVLSQL  V   ++T  C +    ++ +   G 
Sbjct: 246 GFFSMYLMLSNLIAHPKGAQVYVEYEMAVLSQLEAVPPVKETYTCWFKSGCIEIYKGCGA 305

Query: 176 SEFMTLNDLMKPTKHFLHNDTLRVEVKINKISALETL 207
           S FM+L+DL + TK +L NDTL VEVKIN IS ++ L
Sbjct: 306 SNFMSLSDLKERTKGYLVNDTLVVEVKINVISTIKKL 341

BLAST of Clc01G07750 vs. ExPASy TrEMBL
Match: A9PEN0 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G103200 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20
Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 0

Query: 57  KGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGC 116
           KGE L+L+ QP +   +WK  NFS L+++ Y+SQ F+  GY W +L+YP+G   +K G  
Sbjct: 172 KGECLTLVNQPVSDTFTWKIQNFSALDQESYKSQVFSFGGYKWALLVYPKGNSTEK-GKS 231

Query: 117 LSLYLHLQSFRELPQNFQVYVEYEMAVLSQL-GVETKRKT-NRCGYGVKQWSSGFSEFMT 176
           LS+YL ++ F  LP     Y EY + V  QL G   ++K  +   Y +K W  G   FM+
Sbjct: 232 LSIYLKMEDFETLPCGRTTYAEYMLRVKDQLFGKHIEKKAYSHFSYSIKDW--GHLNFMS 291

Query: 177 LNDLMKPTKHFLHNDTLRVEVKINKISALE 205
           L+D+    K FL NDTL VEV+I+ I+ ++
Sbjct: 292 LDDVNALPKGFLVNDTLAVEVQIHVITVVK 318

BLAST of Clc01G07750 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18
Identity = 62/140 (44.29%), Postives = 82/140 (58.57%), Query Frame = 0

Query: 53  NDGKKGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKK 112
           +DG KGEILSLI  P +Y  +WK  +FS  +K    S  F+V+GY+W++ L+P G C   
Sbjct: 185 DDGGKGEILSLINPPEHYKFTWKINHFSTQSKT-LSSDVFSVEGYHWRVELHPNG-CPTA 244

Query: 113 AGGCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGVKQWSSGFSEF 172
               LSL+L     RELP + QVYVEYEMAVLSQ+G +   +      G   W  G +EF
Sbjct: 245 MSNYLSLFLIFDDLRELPDDSQVYVEYEMAVLSQVGDKHWFEYG----GGDGW--GCAEF 304

Query: 173 MTLNDLMKPTKHFLHNDTLR 193
           M+L DL      ++ ND LR
Sbjct: 305 MSLMDLKDTLSGYILNDILR 316

BLAST of Clc01G07750 vs. TAIR 10
Match: AT3G46190.1 (TRAF-like family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 54/159 (33.96%), Postives = 77/159 (48.43%), Query Frame = 0

Query: 43  EYDRHISLYLNDGKKGEILSLIKQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKIL 102
           E+ R I +++    K E+ S  +  +N   +W   NFS L  D Y S PF+    NW + 
Sbjct: 134 EWGRWIDVFVAQRNKSEVFSYDENISNPVFTWSLPNFSTLTLDSYTSDPFSSGDRNWVLK 193

Query: 103 LYPRGFCCKKAGGCLSLYLHLQSFRELPQNFQVYVEYEMAVLSQLGVETKRKTNRCGYGV 162
           +YP G    K    LSLYL  +S      N + YV   + VL+Q+G +   K        
Sbjct: 194 VYPNGDGVGK-DNSLSLYLLSES------NEKNYVRATLRVLNQIGSDNVEKPVEGWPNA 253

Query: 163 KQWSSGFSEFMTLNDLMKPTKHFLHNDTLRVEVKINKIS 202
            +   G+ EF+ L DL   TK F+ +D L VEV+I  IS
Sbjct: 254 AENGWGYQEFIPLADLQDATKGFVVDDLLEVEVEIMAIS 285

BLAST of Clc01G07750 vs. TAIR 10
Match: AT5G06600.1 (ubiquitin-specific protease 12 )

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15
Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 0

Query: 65  KQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQ 124
           + P     +W   NFS  N   + S  F V GY W+IL++P+G         LS+YL + 
Sbjct: 50  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVS 109

Query: 125 SFRELPQNFQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTK 184
               LP  +  Y ++ +AV++Q+    T RK  +  +  ++   GF+ FM L++L  P++
Sbjct: 110 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSR 169

Query: 185 HFLHNDTLRVEVKI 198
            +L NDT+ VE ++
Sbjct: 170 GYLVNDTVLVEAEV 179

BLAST of Clc01G07750 vs. TAIR 10
Match: AT5G06600.2 (ubiquitin-specific protease 12 )

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15
Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 0

Query: 65  KQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQ 124
           + P     +W   NFS  N   + S  F V GY W+IL++P+G         LS+YL + 
Sbjct: 49  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVS 108

Query: 125 SFRELPQNFQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTK 184
               LP  +  Y ++ +AV++Q+    T RK  +  +  ++   GF+ FM L++L  P++
Sbjct: 109 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSR 168

Query: 185 HFLHNDTLRVEVKI 198
            +L NDT+ VE ++
Sbjct: 169 GYLVNDTVLVEAEV 178

BLAST of Clc01G07750 vs. TAIR 10
Match: AT5G06600.3 (ubiquitin-specific protease 12 )

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15
Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 0

Query: 65  KQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQ 124
           + P     +W   NFS  N   + S  F V GY W+IL++P+G         LS+YL + 
Sbjct: 50  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVS 109

Query: 125 SFRELPQNFQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTK 184
               LP  +  Y ++ +AV++Q+    T RK  +  +  ++   GF+ FM L++L  P++
Sbjct: 110 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSR 169

Query: 185 HFLHNDTLRVEVKI 198
            +L NDT+ VE ++
Sbjct: 170 GYLVNDTVLVEAEV 179

BLAST of Clc01G07750 vs. TAIR 10
Match: AT3G11910.1 (ubiquitin-specific protease 13 )

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14
Identity = 40/134 (29.85%), Postives = 73/134 (54.48%), Query Frame = 0

Query: 65  KQPTNYYHSWKFTNFSLLNKDHYESQPFTVQGYNWKILLYPRGFCCKKAGGCLSLYLHLQ 124
           + P +   +W    F+ LN   + S  F V GY W+IL++P+G         LS+YL + 
Sbjct: 49  EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG----NNVDHLSMYLDVA 108

Query: 125 SFRELPQNFQVYVEYEMAVLSQLGVE-TKRKTNRCGYGVKQWSSGFSEFMTLNDLMKPTK 184
               LP  +  Y ++ +AV++Q+    + RK  +  +  ++   GF+ FM L++L +PT+
Sbjct: 109 DAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTR 168

Query: 185 HFLHNDTLRVEVKI 198
            +L NDT+ +E ++
Sbjct: 169 GYLVNDTVLIEAEV 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875772.15.1e-3351.88uncharacterized protein LOC120068142 [Benincasa hispida][more]
XP_038874970.12.0e-2952.94uncharacterized protein LOC120067490 [Benincasa hispida][more]
XP_022146380.18.5e-2835.66probable inactive serine/threonine-protein kinase fnkC [Momordica charantia][more]
XP_031742213.15.5e-2747.50MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus... [more]
KAE8648447.15.5e-2747.50hypothetical protein Csa_008888 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9FPT15.6e-1431.34Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 ... [more]
Q84WU26.1e-1329.85Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 ... [more]
Q9M2H92.6e-1128.89MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis t... [more]
Q9C8708.3e-1025.76MATH domain and coiled-coil domain-containing protein At1g31390 OS=Arabidopsis t... [more]
Q9M2J53.5e-0828.15MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1CX474.1e-2835.66probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX... [more]
A0A6J1CXZ03.1e-2336.78ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=... [more]
A0A1S3CQ201.2e-2247.13uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=... [more]
A9PEN01.4e-2040.67Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G103200 PE=2 ... [more]
A0A6J1CYF61.3e-1844.29uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
Match NameE-valueIdentityDescription
AT3G46190.11.8e-1533.96TRAF-like family protein [more]
AT5G06600.13.9e-1531.34ubiquitin-specific protease 12 [more]
AT5G06600.23.9e-1531.34ubiquitin-specific protease 12 [more]
AT5G06600.33.9e-1531.34ubiquitin-specific protease 12 [more]
AT3G11910.14.4e-1429.85ubiquitin-specific protease 13 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002083MATH/TRAF domainSMARTSM00061math_3coord: 71..178
e-value: 3.2E-14
score: 63.3
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 76..197
e-value: 3.1E-12
score: 46.7
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 69..197
score: 26.834455
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 71..197
e-value: 5.43849E-26
score: 95.5238
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 62..202
e-value: 2.5E-30
score: 107.3
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 57..202
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 67..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G07750.2Clc01G07750.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding