Clc01G07270 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G07270
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein XRI1
Location	ClcChr01: 7494542 .. 7497060 (-)
RNA-Seq Expression	Clc01G07270
Synteny	Clc01G07270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAATTTGAATTGTGTGTTGTATGTTTTGAGGAGGCCAAGTCAGTGTCCTTTCCATACACAAATCACACATTGCTTTACATGCAGCAAACATAAAATCATCACATTTGCAATTATTTAGTCTCCCACATTTTAAAAAAAAAGAAATATATATAAATTCAAACATTGAAAAAGAGAGAGAAAAAAAAAAAAGTTGCAACCCATTTTCCGAATCCCAATACTCCTCTCTCCACACTTTTTTCTTCTTTCTTGCCGTTGACTGACTGCTTCTAAAATCATCAAAATCTCTCTCTTTCTCTGTCTGCCTTTTTCTTTTTTTCTCTCTTTTGAAAAAATTTATATAAACCCATTTTTGAAAAAACCCAAATGGGAGATTTCAGTTTAAAAATTTTAGTAATTACAAAATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTAATTTGTTCAATTCCTCACCGTTGAGTTTTGCAGTTATGGACGGCGGCGGCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCGACGGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCACCATCTTCTTCAATTTGAATTCCCACAAAGCTGTTGGAATGCCCTCGAGAGTTTCGATTGGAACAACCAAATTGACGATATTAATAATGATGATTATTATTATTATCATAATTATGACGCGATTTCTACAGGTGGGGTTTTTGTTTCTTTTTTCTTTTGTTTAAAAAGAAAATGAATGGAATTGTCGTCATTATTATATTAATTGAGTCAGCTTTTTATGGAAAGGAAAAAACAAATGTAGGGTTGAAATTAAATGGAGTGAAACTGAATTTTTGGGTTTGGTTTTAATTGGATTTTTGTTGAATTAAGCAGATGAGGGAATAAGCACTTCGCCGAAAAGCAGAACGAGTGAGGAAACGAGTATGGAAGTTATGTGTGGTGGAGAGAGGATGAAAACGCAAGAAGTGGAGACGTTTTCAACTCCAAATTATTACTATGAACATCATCCCAATTCTTCTTCTTCATCATCTTCGAAATTACACAAAGTTGAGGCTGAGTTTTTGGCTGATAAGGAATGCATTCTCTCCATGTCCCGCAACCTGCCTATTTCAACAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAGAAAGAAAGATATGGGCAATTGTGTATAAGTAATTATAAACAAGATGAAGATTTTTGTGGGGCATTATATTATAATATATGGGCCTCTCTAGATAATGATTTTCTAATAATTTTCATGGGTTACTTTTTTAAAATTTTACAAGTTACGTTTCAAAAATTGAACTCAAAGCCAAAGAAGATCAAAGGGGGAATATTACCTAGTTTATTGTAGTTTTTCAAAAAGCTATAAACAAAAGTTAAATTTTTAAATTTGTTTCTTTAATTTAAGTTCAACTATAAATTTAATTTGTATCTATAAATTTAATCTTTCAATTTTCTATTTTCAATTTTTGTAAAATTTAGGAATCAACTACGTACTTACAAAAGTTTCATTAAATACTATATATATATGATTTTTTTTTTTGGTGTAGCTGGCTCCAACCATCTATTAGACAATCTCTACAACATCAATTTATTTGTTTTTTTTAAAAAAATTATTTTATTGTGCGTATAAAGAAAAGGAAGCATATCATTAAGTGCACCTAAATATTGTTCTATATTTACATATGTAGTATAAAAATTTTGAATTAATCAAGAATTCATATTTAAAACTTATTAAAAATCTAACTAAAATAGATACAAATCTCAAAATTGATGACGGAACATATACTTTCAATGAGAAAATTATATATATAAAGAAAAAGGTAAAATATATATAAAAAAGATTGGCCTCCTTTCATAAAGAAATTATATTGATCTAAACTTTATTATTATTGTTTCTTTAATTGATCAGGAGATGGTGGAATTGAAACAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAGAAGATCTTAATGCCTCCAACCCGGCCGGTCCGACACCCGGTCGGGGATTTTGCATGTAGACCGTGCGTGTCGGCGGATGGACTGGGCCTATCGGGCAAAGCCGTGGTGGCATTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAATAATAAAGACCAAAATGTTAACCCCAAATATTTATTACTACTTCAAAGTCTTTTAAGTTGTTCCAACTTTATCAATTGGCTTTGCCTCTTTGAATTGTACAGAGGGGAGAGAGAAAGAAGGAGAGAAGAGAGAGAGGAAAATGTATATGTAATATAATGATTGGGAGAAGGGAGAAAGAGAGAGAGGTAAATGAATTTGTACTTGTATCATAGTTTTCAATTAAGACAGTCCTCCAGTCGTAATCGAATTATTTAAATGAGTCTTTTACATAAA

mRNA sequence

TGAAATTTGAATTGTGTGTTGTATGTTTTGAGGAGGCCAAGTCAGTGTCCTTTCCATACACAAATCACACATTGCTTTACATGCAGCAAACATAAAATCATCACATTTGCAATTATTTAGTCTCCCACATTTTAAAAAAAAAGAAATATATATAAATTCAAACATTGAAAAAGAGAGAGAAAAAAAAAAAAGTTGCAACCCATTTTCCGAATCCCAATACTCCTCTCTCCACACTTTTTTCTTCTTTCTTGCCGTTGACTGACTGCTTCTAAAATCATCAAAATCTCTCTCTTTCTCTGTCTGCCTTTTTCTTTTTTTCTCTCTTTTGAAAAAATTTATATAAACCCATTTTTGAAAAAACCCAAATGGGAGATTTCAGTTTAAAAATTTTAGTAATTACAAAATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTAATTTGTTCAATTCCTCACCGTTGAGTTTTGCAGTTATGGACGGCGGCGGCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCGACGGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCACCATCTTCTTCAATTTGAATTCCCACAAAGCTGTTGGAATGCCCTCGAGAGTTTCGATTGGAACAACCAAATTGACGATATTAATAATGATGATTATTATTATTATCATAATTATGACGCGATTTCTACAGATGAGGGAATAAGCACTTCGCCGAAAAGCAGAACGAGTGAGGAAACGAGTATGGAAGTTATGTGTGGTGGAGAGAGGATGAAAACGCAAGAAGTGGAGACGTTTTCAACTCCAAATTATTACTATGAACATCATCCCAATTCTTCTTCTTCATCATCTTCGAAATTACACAAAGTTGAGGCTGAGTTTTTGGCTGATAAGGAATGCATTCTCTCCATGTCCCGCAACCTGCCTATTTCAACAGGAGATGGTGGAATTGAAACAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAGAAGATCTTAATGCCTCCAACCCGGCCGGTCCGACACCCGGTCGGGGATTTTGCATGTAGACCGTGCGTGTCGGCGGATGGACTGGGCCTATCGGGCAAAGCCGTGGTGGCATTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAATAATAAAGACCAAAATGTTAACCCCAAATATTTATTACTACTTCAAAGTCTTTTAAGTTGTTCCAACTTTATCAATTGGCTTTGCCTCTTTGAATTGTACAGAGGGGAGAGAGAAAGAAGGAGAGAAGAGAGAGAGGAAAATGTATATGTAATATAATGATTGGGAGAAGGGAGAAAGAGAGAGAGGTAAATGAATTTGTACTTGTATCATAGTTTTCAATTAAGACAGTCCTCCAGTCGTAATCGAATTATTTAAATGAGTCTTTTACATAAA

Coding sequence (CDS)

ATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTAATTTGTTCAATTCCTCACCGTTGAGTTTTGCAGTTATGGACGGCGGCGGCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCGACGGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCACCATCTTCTTCAATTTGAATTCCCACAAAGCTGTTGGAATGCCCTCGAGAGTTTCGATTGGAACAACCAAATTGACGATATTAATAATGATGATTATTATTATTATCATAATTATGACGCGATTTCTACAGATGAGGGAATAAGCACTTCGCCGAAAAGCAGAACGAGTGAGGAAACGAGTATGGAAGTTATGTGTGGTGGAGAGAGGATGAAAACGCAAGAAGTGGAGACGTTTTCAACTCCAAATTATTACTATGAACATCATCCCAATTCTTCTTCTTCATCATCTTCGAAATTACACAAAGTTGAGGCTGAGTTTTTGGCTGATAAGGAATGCATTCTCTCCATGTCCCGCAACCTGCCTATTTCAACAGGAGATGGTGGAATTGAAACAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAGAAGATCTTAATGCCTCCAACCCGGCCGGTCCGACACCCGGTCGGGGATTTTGCATGTAGACCGTGCGTGTCGGCGGATGGACTGGGCCTATCGGGCAAAGCCGTGGTGGCATTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAA

Protein sequence

MSSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG

Homology

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BLAST of Clc01G07270 vs. NCBI nr
Match: XP_038874964.1 (uncharacterized protein LOC120067481 [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 1.0e-113
Identity = 226/283 (79.86%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLDHH 61
           S G ELQSLS LFNSSPL FAVMDG  AVI+PSFSPAISTGYLEDALVEY+SKRRRLDHH
Sbjct: 3   SGGGELQSLS-LFNSSPLGFAVMDGAAAVIEPSFSPAISTGYLEDALVEYTSKRRRLDHH 62

Query: 62  LLQFEFPQSCWNALESFDWNNQIDDI-NNDDYYYYHNYDAISTDEGISTSPKSRTSEETS 121
           L QFEFPQSCW+ALE +DWNNQIDD+ NN++YYYYHNYDA+ST+EGIS+S KSR SEETS
Sbjct: 63  LFQFEFPQSCWSALEGYDWNNQIDDMNNNNNYYYYHNYDAVSTEEGISSSSKSRMSEETS 122

Query: 122 MEVMCGGERMKTQEVETFSTPNYYYEHH-PNSSSSS-SSKLHKV--EAEFLADKECILSM 181
           M++      MKTQEV+T+STPNYYYEH+ PNSSSSS SSKLHKV  EAEFLADKE I S+
Sbjct: 123 MDM------MKTQEVDTYSTPNYYYEHYDPNSSSSSNSSKLHKVEAEAEFLADKESIFSI 182

Query: 182 SRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPV 241
           SRNLPISTG               +PFALVKPGG+EGDMTLNDINQKILMPPTRPVRHPV
Sbjct: 183 SRNLPISTGFFFF----------FHPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPV 242

Query: 242 GDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           GDFACRPCVSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 243 GDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 268

[Close]

BLAST of Clc01G07270 vs. NCBI nr
Match: XP_004151416.1 (uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hypothetical protein Csa_017825 [Cucumis sativus])

HSP 1 Score: 402.9 bits (1034), Expect = 2.2e-108
Identity = 227/292 (77.74%), Postives = 239/292 (81.85%), Query Frame = 0


Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLD-- 61
           SSGSEL SL  L NSSPL FA+M+G  AVIDP FSPAISTGYLEDALVEY+SKRRRLD  
Sbjct: 4   SSGSELHSLPFL-NSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDH 63

Query: 62  --HHLLQFEFPQSCWNALESFD-WNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS 121
             HH   F+FPQ+      S+D WNNQIDDINN DYYYY+NY AISTDEGIS+SPKSR S
Sbjct: 64  DQHHFFHFQFPQT------SYDYWNNQIDDINN-DYYYYYNYHAISTDEGISSSPKSRLS 123

Query: 122 -EETSMEVMCGGERMKTQEVETFSTPNYYYE--------HHPNSSSSSSSKLHKVEAEFL 181
            EETSME M     MKTQ+VET+STPNYYYE        HHPNSSSSSSSK HK E    
Sbjct: 124 NEETSMEDM-----MKTQDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSHKFE---- 183

Query: 182 ADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 241
           AD++ I SMS NLPISTGDG IE KK KKRKVVYPFALVKPGGVEGDMTLNDINQKILMP
Sbjct: 184 ADQKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 243

Query: 242 PTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           PTRPVRHPVGDFACRPCVSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 244 PTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]

BLAST of Clc01G07270 vs. NCBI nr
Match: KAA0067591.1 (protein XRI1 [Cucumis melo var. makuwa])

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-101
Identity = 211/275 (76.73%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 24  MDGGG-AVIDPSFSPAISTGYLEDALVEYSSKRRRLD---HHLLQFEFPQSCWNALESFD 83
           M+GGG AVIDP FSPAISTGYLEDAL+EY+SKRRRLD   HH  QFEFPQS ++      
Sbjct: 1   MEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHFFQFEFPQSSYHY----- 60

Query: 84  WNNQIDDINNDDYYYYHNYDAIST-----------DEGISTSPKSRTS-EETSMEVMCGG 143
           WN+QIDD+NND+YYYY NYDAIST           DEGIS+SPKSR S EETSME +   
Sbjct: 61  WNHQIDDMNNDNYYYY-NYDAISTGGFSLHYSIVIDEGISSSPKSRLSNEETSMEAI--- 120

Query: 144 ERMKTQEVETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPIST 203
             MKTQ+VET+STPNYYYE   HHPNSSSSSSSK HK E    AD++ I SMS NLPIST
Sbjct: 121 --MKTQDVETYSTPNYYYEHHHHHPNSSSSSSSKSHKFE----ADQKSIFSMSTNLPIST 180

Query: 204 GDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPC 263
           GDG IETKK KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPC
Sbjct: 181 GDGEIETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPC 240

Query: 264 VSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           VSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 241 VSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 260

[Close]

BLAST of Clc01G07270 vs. NCBI nr
Match: XP_008466833.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-92
Identity = 198/261 (75.86%), Postives = 211/261 (80.84%), Query Frame = 0


Query: 24  MDGGG-AVIDPSFSPAISTGYLEDALVEYSSKRRRLDHHLLQFEFPQSCWNALESFDWNN 83
           M+GGG AVIDP FSPAISTGYLEDAL+EY+SKRRRLDH    F F  +   AL       
Sbjct: 1   MEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHF-FNLNSHKALTIIGTTK 60

Query: 84  QIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS-EETSMEVMCGGERMKTQEVETFSTP 143
            +  I     YYY+NYDAISTDEGIS+SPKSR S EETSME +     MKTQ+VET+STP
Sbjct: 61  LMIXIM---IYYYYNYDAISTDEGISSSPKSRLSNEETSMEAI-----MKTQDVETYSTP 120

Query: 144 NYYYE---HHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRK 203
           NYYYE   HHPNSSSSSSSK HK E    AD++ I SMS NLPISTGDG IETKK KKRK
Sbjct: 121 NYYYEHHHHHPNSSSSSSSKSHKFE----ADQKSIFSMSTNLPISTGDGEIETKKAKKRK 180

Query: 204 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 263
           VVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADG GLSGKAVV
Sbjct: 181 VVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVV 240

Query: 264 ALTKIHTQGRRGTITIIRTKG 280
           ALTKIHTQGRRGTITIIRTKG
Sbjct: 241 ALTKIHTQGRRGTITIIRTKG 248

[Close]

BLAST of Clc01G07270 vs. NCBI nr
Match: XP_022146436.1 (uncharacterized protein LOC111015652 [Momordica charantia])

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-88
Identity = 200/300 (66.67%), Postives = 222/300 (74.00%), Query Frame = 0


Query: 5   SELQSLSNLFNSSPLSFAVMDGGGA----VIDPSFSPAISTGYLEDALVEYSSKRRRL-- 64
           S+L SL     SSPL+FAVMD   A     +DP FSP +STGYLEDALVE++SKRRRL  
Sbjct: 3   SDLHSL-----SSPLAFAVMDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLL 62

Query: 65  -DH----HLL-QFEFPQSCW-----------NALESFDWNNQIDDINNDDYYYYHNYDAI 124
            DH    +L+ QF+FPQS W           NA ++FDW NQI D N        NYDA+
Sbjct: 63  NDHIHNNNLVDQFQFPQSYWSSYCTWGADADNASDTFDWTNQIYDFN--------NYDAV 122

Query: 125 STDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNY--YYEHHPNSSSSSSSKL 184
           S DE ISTSPKSR SEET+   +     MKT EVE FSTPNY  Y   HPNSSSSSS   
Sbjct: 123 SADELISTSPKSRISEETNYTDV---SAMKTPEVEAFSTPNYNNYCYEHPNSSSSSSK-- 182

Query: 185 HKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLND 244
           H+  AEFLADK+ ILS+SR LP+S+G GG ETK  KKRKVVYPFALVKPGGVEGD+TLND
Sbjct: 183 HQFHAEFLADKQTILSLSRKLPLSSG-GGSETKNLKKRKVVYPFALVKPGGVEGDITLND 242

Query: 245 INQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           INQKILMPPTRPVRHPVGDFACRPCVSADG GLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 243 INQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 283

[Close]

BLAST of Clc01G07270 vs. ExPASy Swiss-Prot
Match: Q6NLW5 (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-13
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 199 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 258
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAVIQTS-AFSGKPVV 285

Query: 259 ALTKIHTQGRRGTITIIRTKG 280
             TKI T+G +G+ITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of Clc01G07270 vs. ExPASy TrEMBL
Match: A0A0A0KMV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 227/292 (77.74%), Postives = 239/292 (81.85%), Query Frame = 0


Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLD-- 61
           SSGSEL SL  L NSSPL FA+M+G  AVIDP FSPAISTGYLEDALVEY+SKRRRLD  
Sbjct: 4   SSGSELHSLPFL-NSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDH 63

Query: 62  --HHLLQFEFPQSCWNALESFD-WNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS 121
             HH   F+FPQ+      S+D WNNQIDDINN DYYYY+NY AISTDEGIS+SPKSR S
Sbjct: 64  DQHHFFHFQFPQT------SYDYWNNQIDDINN-DYYYYYNYHAISTDEGISSSPKSRLS 123

Query: 122 -EETSMEVMCGGERMKTQEVETFSTPNYYYE--------HHPNSSSSSSSKLHKVEAEFL 181
            EETSME M     MKTQ+VET+STPNYYYE        HHPNSSSSSSSK HK E    
Sbjct: 124 NEETSMEDM-----MKTQDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSHKFE---- 183

Query: 182 ADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 241
           AD++ I SMS NLPISTGDG IE KK KKRKVVYPFALVKPGGVEGDMTLNDINQKILMP
Sbjct: 184 ADQKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 243

Query: 242 PTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           PTRPVRHPVGDFACRPCVSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 244 PTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]

BLAST of Clc01G07270 vs. ExPASy TrEMBL
Match: A0A5A7VPU6 (Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00570 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.7e-101
Identity = 211/275 (76.73%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 24  MDGGG-AVIDPSFSPAISTGYLEDALVEYSSKRRRLD---HHLLQFEFPQSCWNALESFD 83
           M+GGG AVIDP FSPAISTGYLEDAL+EY+SKRRRLD   HH  QFEFPQS ++      
Sbjct: 1   MEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHFFQFEFPQSSYHY----- 60

Query: 84  WNNQIDDINNDDYYYYHNYDAIST-----------DEGISTSPKSRTS-EETSMEVMCGG 143
           WN+QIDD+NND+YYYY NYDAIST           DEGIS+SPKSR S EETSME +   
Sbjct: 61  WNHQIDDMNNDNYYYY-NYDAISTGGFSLHYSIVIDEGISSSPKSRLSNEETSMEAI--- 120

Query: 144 ERMKTQEVETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPIST 203
             MKTQ+VET+STPNYYYE   HHPNSSSSSSSK HK E    AD++ I SMS NLPIST
Sbjct: 121 --MKTQDVETYSTPNYYYEHHHHHPNSSSSSSSKSHKFE----ADQKSIFSMSTNLPIST 180

Query: 204 GDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPC 263
           GDG IETKK KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPC
Sbjct: 181 GDGEIETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPC 240

Query: 264 VSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           VSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 241 VSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 260

[Close]

BLAST of Clc01G07270 vs. ExPASy TrEMBL
Match: A0A1S3CSB7 (LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=3656 GN=LOC103504140 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.9e-93
Identity = 198/261 (75.86%), Postives = 211/261 (80.84%), Query Frame = 0


Query: 24  MDGGG-AVIDPSFSPAISTGYLEDALVEYSSKRRRLDHHLLQFEFPQSCWNALESFDWNN 83
           M+GGG AVIDP FSPAISTGYLEDAL+EY+SKRRRLDH    F F  +   AL       
Sbjct: 1   MEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHF-FNLNSHKALTIIGTTK 60

Query: 84  QIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS-EETSMEVMCGGERMKTQEVETFSTP 143
            +  I     YYY+NYDAISTDEGIS+SPKSR S EETSME +     MKTQ+VET+STP
Sbjct: 61  LMIXIM---IYYYYNYDAISTDEGISSSPKSRLSNEETSMEAI-----MKTQDVETYSTP 120

Query: 144 NYYYE---HHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRK 203
           NYYYE   HHPNSSSSSSSK HK E    AD++ I SMS NLPISTGDG IETKK KKRK
Sbjct: 121 NYYYEHHHHHPNSSSSSSSKSHKFE----ADQKSIFSMSTNLPISTGDGEIETKKAKKRK 180

Query: 204 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 263
           VVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADG GLSGKAVV
Sbjct: 181 VVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVV 240

Query: 264 ALTKIHTQGRRGTITIIRTKG 280
           ALTKIHTQGRRGTITIIRTKG
Sbjct: 241 ALTKIHTQGRRGTITIIRTKG 248

[Close]

BLAST of Clc01G07270 vs. ExPASy TrEMBL
Match: A0A6J1CZC7 (uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015652 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.6e-89
Identity = 200/300 (66.67%), Postives = 222/300 (74.00%), Query Frame = 0


Query: 5   SELQSLSNLFNSSPLSFAVMDGGGA----VIDPSFSPAISTGYLEDALVEYSSKRRRL-- 64
           S+L SL     SSPL+FAVMD   A     +DP FSP +STGYLEDALVE++SKRRRL  
Sbjct: 3   SDLHSL-----SSPLAFAVMDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLL 62

Query: 65  -DH----HLL-QFEFPQSCW-----------NALESFDWNNQIDDINNDDYYYYHNYDAI 124
            DH    +L+ QF+FPQS W           NA ++FDW NQI D N        NYDA+
Sbjct: 63  NDHIHNNNLVDQFQFPQSYWSSYCTWGADADNASDTFDWTNQIYDFN--------NYDAV 122

Query: 125 STDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNY--YYEHHPNSSSSSSSKL 184
           S DE ISTSPKSR SEET+   +     MKT EVE FSTPNY  Y   HPNSSSSSS   
Sbjct: 123 SADELISTSPKSRISEETNYTDV---SAMKTPEVEAFSTPNYNNYCYEHPNSSSSSSK-- 182

Query: 185 HKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLND 244
           H+  AEFLADK+ ILS+SR LP+S+G GG ETK  KKRKVVYPFALVKPGGVEGD+TLND
Sbjct: 183 HQFHAEFLADKQTILSLSRKLPLSSG-GGSETKNLKKRKVVYPFALVKPGGVEGDITLND 242

Query: 245 INQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           INQKILMPPTRPVRHPVGDFACRPCVSADG GLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 243 INQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 283

[Close]

BLAST of Clc01G07270 vs. ExPASy TrEMBL
Match: A0A5D3BG61 (Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00470 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 4.8e-72
Identity = 164/271 (60.52%), Postives = 174/271 (64.21%), Query Frame = 0


Query: 24  MDGGG-AVIDPSFSPAISTGYLEDALVEYSSKRRRLD---HHLLQFEFPQSCWNALESFD 83
           M+GGG AVIDP FSPAISTGYLEDAL+EY+SKRRRLD   HH  QFEFPQS ++      
Sbjct: 1   MEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHFFQFEFPQSSYHY----- 60

Query: 84  WNNQIDDINNDDYYYYHNYDAIST-----------DEGISTSPKSRTSEETSMEVMCGGE 143
           WN+QIDD+NND+YYYY NYDAIST           DEGIS+SPKSR S E          
Sbjct: 61  WNHQIDDMNNDNYYYY-NYDAISTGGFSLHYSIVIDEGISSSPKSRLSNE---------- 120

Query: 144 RMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGG 203
                                                                  T DG 
Sbjct: 121 ------------------------------------------------------ETSDGE 180

Query: 204 IETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSAD 263
           IETKK KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSAD
Sbjct: 181 IETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSAD 201

Query: 264 GLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           G GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 241 GPGLSGKAVVALTKIHTQGRRGTITIIRTKG 201

[Close]

BLAST of Clc01G07270 vs. TAIR 10
Match: AT2G01990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits to 118 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-35
Identity = 110/243 (45.27%), Postives = 132/243 (54.32%), Query Frame = 0


Query: 39  ISTGYLEDALVEYS--SKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYH 98
           +STGYLEDAL+E    SKRRR     L FE P   +N           DD + +D+  + 
Sbjct: 19  VSTGYLEDALIESGERSKRRR-----LLFEDPSKSFN-----------DDDSQNDWGLHE 78

Query: 99  NYDAISTDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSS 158
           +Y  +++      +P   T E  S    C          ET S  N Y    P++S S  
Sbjct: 79  SYSCLNSQ---FVTPHVNTGERISGVSYC---------QETIS--NVY--ESPDTSVS-- 138

Query: 159 SKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMT 218
                       DK  +   S   P S+  G     K    K+VYPF LVKPGG E D+T
Sbjct: 139 -----------YDKIYVREKSPTEPSSSNCG--NKNKRLITKLVYPFGLVKPGGRENDVT 198

Query: 219 LNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIR 278
           LNDIN++ILM P+RP+RHPVGDFA RPCVS  G GLSGKAVVALTKI TQG RGTITIIR
Sbjct: 199 LNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALTKIQTQG-RGTITIIR 213

Query: 279 TKG 280
           TKG
Sbjct: 259 TKG 213

[Close]

BLAST of Clc01G07270 vs. TAIR 10
Match: AT1G14630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 125 Blast hits to 123 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34
Identity = 103/243 (42.39%), Postives = 134/243 (55.14%), Query Frame = 0


Query: 39  ISTGYLEDALVEYS--SKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYH 98
           +STGYLEDAL+E+S  SKRRRL                  SF   N  +D  ++D  +  
Sbjct: 50  VSTGYLEDALIEFSGRSKRRRL------------------SF---NGAEDKPDNDLDHSQ 109

Query: 99  NYDAISTDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSS 158
           N+  +S +   ++S  +  S  +S+ +        ++E  + S+ N +        SSS+
Sbjct: 110 NHWGLSENYSCTSSQFADESPNSSINIC-------SEEKSSISSRNSF------EPSSST 169

Query: 159 SKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMT 218
           SK +  +                               +K++VVYPF +VKPGG E D+T
Sbjct: 170 SKKNDYD-------------------------------EKKRVVYPFGVVKPGGREEDIT 226

Query: 219 LNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIR 278
           LNDIN++ILMP  RPVRHPVGDFACRPCVSADG GLSGKAVVA TKI T G RGTITIIR
Sbjct: 230 LNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVAFTKIQTLG-RGTITIIR 226

Query: 279 TKG 280
           TKG
Sbjct: 290 TKG 226

[Close]

BLAST of Clc01G07270 vs. TAIR 10
Match: AT5G48720.1 (x-ray induced transcript 1 )

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-14
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 199 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 258
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 192 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAVIQTS-AFSGKPVV 251

Query: 259 ALTKIHTQGRRGTITIIRTKG 280
             TKI T+G +G+ITI+RT+G
Sbjct: 252 GKTKIRTEGGKGSITIMRTRG 266

[Close]

BLAST of Clc01G07270 vs. TAIR 10
Match: AT5G48720.2 (x-ray induced transcript 1 )

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-14
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 199 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 258
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAVIQTS-AFSGKPVV 285

Query: 259 ALTKIHTQGRRGTITIIRTKG 280
             TKI T+G +G+ITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

The following BLAST results are available for this feature:

BLAST of Clc01G07270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874964.1	1.0e-113	79.86	uncharacterized protein LOC120067481 [Benincasa hispida]	[more]
XP_004151416.1	2.2e-108	77.74	uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hypothetical ...	[more]
KAA0067591.1	3.5e-101	76.73	protein XRI1 [Cucumis melo var. makuwa]	[more]
XP_008466833.2	1.0e-92	75.86	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 [Cucumis me...	[more]
XP_022146436.1	1.2e-88	66.67	uncharacterized protein LOC111015652 [Momordica charantia]	[more]

BLAST of Clc01G07270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLW5	3.7e-13	50.62	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of Clc01G07270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMV0	1.1e-108	77.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1	[more]
A0A5A7VPU6	1.7e-101	76.73	Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00570 P...	[more]
A0A1S3CSB7	4.9e-93	75.86	LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=365...	[more]
A0A6J1CZC7	5.6e-89	66.67	uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A5D3BG61	4.8e-72	60.52	Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00470 P...	[more]

BLAST of Clc01G07270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01990.1	2.1e-35	45.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G14630.1	1.3e-34	42.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G48720.1	2.6e-14	50.62	x-ray induced transcript 1	[more]
AT5G48720.2	2.6e-14	50.62	x-ray induced transcript 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039933	Protein XRI1	PANTHER	PTHR33385	PROTEIN XRI1	coord: 20..279
None	No IPR available	PANTHER	PTHR33385:SF18	XRI1-LIKE PROTEIN	coord: 20..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G07270.1	Clc01G07270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007143	female meiotic nuclear division
biological_process	GO:0007140	male meiotic nuclear division