Clc01G06300 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G06300
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger CCCH domain-containing protein 15-like
Location	ClcChr01: 6124277 .. 6127318 (+)
RNA-Seq Expression	Clc01G06300
Synteny	Clc01G06300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGCAATCGACAACTGTCTGTGGATCGTATGTTTATTGAAGTTTGAGATCGGAAAGAAAATTATCTGTGATCTTTCTTTTTGAAGGTTTGAGTTCGGATCATCGAAATGAGCTAATGTTTGAATTCGTGATTGTATTTGGCGTAGTTTCGTTTACTGTTATTGAAGAAATTACGCGGACGTGGTTTATGAGTAGTTTGATTAATGCGTAATATAATTTGCAGTTGAAATGCACAAAAGCACCACTTCTGCGTCGAATACCATTGCTGCTGCGACCACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTATCTCTTCCATTGACTCTCTATGGTGACTCGACTCACGCGGATTCAACCTCCTCTTCAAAAACGATAAGCAGCCACCTCTATCAAACCCGCGTCGTACAAGATCACCAGGAAATGGTCAATCGTCATAGCCTCTGTCTCACTCATCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGGCAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTTAGCAAACACCTCAGCCTCCTGATCCACGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGTGGAAGGATTCCGCGGACTCAGTGTATCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGCGGAAGGGTAGAGGGCGTTGAGGTGGAGAGATTTTCGCTCCCAAAGAGCATCTCCGTGAGGTCCAATGGATACCTGAAGATGGCACAAGCCGGCACCAGCCAGGGCGGAAAGGTCCGCGCCTCATCTCGGCCCAGAACTGCAAGTCCCGTCAAAGTTACGGTAATGACACGTTATTAATTTTACAAGATTGCCCTTCTCATCCATCTAATCATGTTAACTAATTGAGCGCTCTACTATCTGAATTAATTTCAATCACGTGATTCTAGAGAGATTATAGCTCTGTTTGTGGCCAATTGCTTTAGGAAGAAGAAAGTCTCTGGTTACGTGGGAGGACGATAGCTTCTTTAGCGTTTTTGCTTCAATTACAATTATTTTTTCCTTAAAAGAATCATATAACTAATTAGCCGAATTAGAATGTATCAGATTCTATGTTACGGCAAATGGTCATTGAAGATAATGGGACGAAAGTTTCTAATAATATATATACACATGTATATTCTTTTGAGTACCAAAGTTTCTAATATTTTATTTAGAAATATTGTATAGTTACTAGATGTGGAATGTAGAACATTATTATTGTGATATTAAATAGAAGCATGATATTAAGTAGAGACAATTCATTATCATCGTGAAAATTTGACTCTGCACCTATCCTATTTATTGTAGTTAATATTGAGTCACATCGGCTGAATTTGTTGTTTTTTCTTCCACCATTTTTTAAACATTGCAGTCAATTCTTCCTTATAGCAATTACTCGTTTACTTTTTCCTTTTATATTTTTCTAGACCCAGTAAATATTGGTCAAGTGTGTAGTCAATTTTCTTCTTCTTCTAGTTCATATTGAATGGCATAGGTTGAATGTGATTTTTTTTTCTTCTTCGTCTTTCTTAGGCGTAGCAGCCAAGTCTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGTACTTATTGTAGCAGCTACTACTGAGTCCCATAGGTTGAATGTGTTAATTTCAATTTGTATTAGGTACTCTACAGCCAAGTTTTCTGTTACTGTGTTAGGGACTTCTTTAAATCCCAGGATAATTGCAAAACTTTTAGGAATAATAATTAGTCATATTTACTATTATGTAATCAAAATTATTGTAATGGTAATGAATTTTCTTTATTATTCCTAATTCACATAATATTTTTGTTAAATGGTTTTTCGTAAGGGCTGTTTTCAAATATTATAGAAAAATAAACTAAAATATTTACAAATATAGCAAACTTTTACTACTATCTGCGATAAACTATGATAAATTACTATATCTGTCATGATAGACACATATAGTAATCTATGATAGACACATATAGTAATCTATCGCGGTCTATTGCAGATAGACTGTGATATGTTACTATTGTTTGTAAATATTTTTAACAGTTTTGTCATTTAAAATAATTTCATTTTTTGTAAATGTATTTAAATGGTCCTACTTTTCACACTACTATTGATGGACTGTGTTTGCTAGAAAGTAAACATAGCCCAAGTGTGTAACAACATTTTTATAGACTCCTACCAACAATATTGTCATAGAATCTAAATTTTGCTATATCTACAAATTTTTTTGTATTGTACTATATTTGCTAATACTTTAAGCTTGATTGCTATATCAACCACACAAGCACAAACCATGTCAAATCAGTTACTTCACAAAATTTATATTTTATTAAACAGGGTTGATTTTGATTGATGATAACGAATTTCTGTCTAATACTTACACACTAGTATAATCCTTTTTGAGAGAACGTTATTGTGCTTTCATGATTCATCCTAGACAGGGTTGATCCCATTTGTATTAGGCATTACTGTACTTAACATGATTTTTCATTCGATAAGCTATTATAAGACGGTCAATTTGATAGAACAAATTATCTGTTCTGAAAATACAGCAGAAGGTGTACGTGCAAGGAGTGAAAGAAGAGGAAAAGCCACTGGAATTAGAGGTGTACAACCAGGGCATGTTCAAAACCGAGCTCTGCAACAAATGGCAAGAAACGGGCAGCTGCCCCTATGGAGACCACTGCCAATTCGCCCATGGAATAGAGGAGCTCCGCCCTGTGATCCGCCACCCCCGCTACAAGACGGAGGTCTGCCGGATGGTCCTCGCCGGAGTCGTCTGCCCTTACGGTCACCGCTGCCACTTTCGTCATGCACTCACTGACCAGGAAAGGCTCATGGGAACACTCAAGCCCACCTGCAGGACCACCACCCCCAAGCTCGACAGGTGA

mRNA sequence

ATGGAAAGCAATCGACAACTGTCTGTGGATCTTGAAATGCACAAAAGCACCACTTCTGCGTCGAATACCATTGCTGCTGCGACCACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTATCTCTTCCATTGACTCTCTATGGTGACTCGACTCACGCGGATTCAACCTCCTCTTCAAAAACGATAAGCAGCCACCTCTATCAAACCCGCGTCGTACAAGATCACCAGGAAATGGTCAATCGTCATAGCCTCTGTCTCACTCATCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGGCAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTTAGCAAACACCTCAGCCTCCTGATCCACGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGTGGAAGGATTCCGCGGACTCAGTGTATCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGCGGAAGGGTAGAGGGCGTTGAGGTGGAGAGATTTTCGCTCCCAAAGAGCATCTCCGTGAGGTCCAATGGATACCTGAAGATGGCACAAGCCGGCACCAGCCAGGGCGGAAAGGTCCGCGCCTCATCTCGGCCCAGAACTGCAAGTCCCGTCAAAGTTACGCAGAAGGTGTACGTGCAAGGAGTGAAAGAAGAGGAAAAGCCACTGGAATTAGAGGTGTACAACCAGGGCATGTTCAAAACCGAGCTCTGCAACAAATGGCAAGAAACGGGCAGCTGCCCCTATGGAGACCACTGCCAATTCGCCCATGGAATAGAGGAGCTCCGCCCTGTGATCCGCCACCCCCGCTACAAGACGGAGGTCTGCCGGATGGTCCTCGCCGGAGTCGTCTGCCCTTACGGTCACCGCTGCCACTTTCGTCATGCACTCACTGACCAGGAAAGGCTCATGGGAACACTCAAGCCCACCTGCAGGACCACCACCCCCAAGCTCGACAGGTGA

Coding sequence (CDS)

ATGGAAAGCAATCGACAACTGTCTGTGGATCTTGAAATGCACAAAAGCACCACTTCTGCGTCGAATACCATTGCTGCTGCGACCACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTATCTCTTCCATTGACTCTCTATGGTGACTCGACTCACGCGGATTCAACCTCCTCTTCAAAAACGATAAGCAGCCACCTCTATCAAACCCGCGTCGTACAAGATCACCAGGAAATGGTCAATCGTCATAGCCTCTGTCTCACTCATCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGGCAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTTAGCAAACACCTCAGCCTCCTGATCCACGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGTGGAAGGATTCCGCGGACTCAGTGTATCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGCGGAAGGGTAGAGGGCGTTGAGGTGGAGAGATTTTCGCTCCCAAAGAGCATCTCCGTGAGGTCCAATGGATACCTGAAGATGGCACAAGCCGGCACCAGCCAGGGCGGAAAGGTCCGCGCCTCATCTCGGCCCAGAACTGCAAGTCCCGTCAAAGTTACGCAGAAGGTGTACGTGCAAGGAGTGAAAGAAGAGGAAAAGCCACTGGAATTAGAGGTGTACAACCAGGGCATGTTCAAAACCGAGCTCTGCAACAAATGGCAAGAAACGGGCAGCTGCCCCTATGGAGACCACTGCCAATTCGCCCATGGAATAGAGGAGCTCCGCCCTGTGATCCGCCACCCCCGCTACAAGACGGAGGTCTGCCGGATGGTCCTCGCCGGAGTCGTCTGCCCTTACGGTCACCGCTGCCACTTTCGTCATGCACTCACTGACCAGGAAAGGCTCATGGGAACACTCAAGCCCACCTGCAGGACCACCACCCCCAAGCTCGACAGGTGA

Protein sequence

MESNRQLSVDLEMHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSTHADSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR

Homology

[Close]

BLAST of Clc01G06300 vs. NCBI nr
Match: XP_038875724.1 (zinc finger CCCH domain-containing protein 15-like isoform X1 [Benincasa hispida])

HSP 1 Score: 674.5 bits (1739), Expect = 5.2e-190
Identity = 340/349 (97.42%), Postives = 346/349 (99.14%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQ NDVYASLYNSPIFAPKQSVPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQANDVYASLYNSPIFAPKQSVPVSLPLTLYGD 60

Query: 73  STHADSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSI 132
           STHADS SSSK+IS+HLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLR+I
Sbjct: 61  STHADSISSSKSISNHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRTI 120

Query: 133 NHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPTS 192
           NHELSKHLSLLIHASVQKQYGSSDQAPPFNF+EGFRGLSV+EKGASSSAW+DISDESPTS
Sbjct: 121 NHELSKHLSLLIHASVQKQYGSSDQAPPFNFMEGFRGLSVAEKGASSSAWDDISDESPTS 180

Query: 193 VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQKV 252
           VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTS GGKVRASSRPRTASPVKVTQKV
Sbjct: 181 VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSHGGKVRASSRPRTASPVKVTQKV 240

Query: 253 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 312
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 313 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR 362
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR 349

[Close]

BLAST of Clc01G06300 vs. NCBI nr
Match: XP_038875725.1 (zinc finger CCCH domain-containing protein 15-like isoform X2 [Benincasa hispida])

HSP 1 Score: 668.3 bits (1723), Expect = 3.7e-188
Identity = 339/349 (97.13%), Postives = 345/349 (98.85%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQ NDVYASLYNSPIFAPKQSVPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQANDVYASLYNSPIFAPKQSVPVSLPLTLYGD 60

Query: 73  STHADSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSI 132
           STHADS SSSK+IS+HLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLR+I
Sbjct: 61  STHADSISSSKSISNHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRTI 120

Query: 133 NHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPTS 192
           NHELSKHLSLLIHASVQKQYGSSDQAPPFNF+EGFRGLSV+EKGASSSAW+DISDESPTS
Sbjct: 121 NHELSKHLSLLIHASVQKQYGSSDQAPPFNFMEGFRGLSVAEKGASSSAWDDISDESPTS 180

Query: 193 VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQKV 252
           VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTS GGKVRASSRPRTASPVKVT KV
Sbjct: 181 VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSHGGKVRASSRPRTASPVKVT-KV 240

Query: 253 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 312
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 313 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR 362
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR 348

[Close]

BLAST of Clc01G06300 vs. NCBI nr
Match: XP_008467171.1 (PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo])

HSP 1 Score: 657.9 bits (1696), Expect = 5.0e-185
Identity = 336/351 (95.73%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNFVEGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVTQK
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of Clc01G06300 vs. NCBI nr
Match: KAA0046296.1 (zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var. makuwa] >TYK30461.1 zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 656.4 bits (1692), Expect = 1.5e-184
Identity = 335/351 (95.44%), Postives = 342/351 (97.44%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTND YASLYNSPIFAPKQ VPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDAYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNFVEGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVTQK
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of Clc01G06300 vs. NCBI nr
Match: XP_004151447.1 (zinc finger CCCH domain-containing protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 334/351 (95.16%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S+SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNF EGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVTQK
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of Clc01G06300 vs. ExPASy Swiss-Prot
Match: Q9C9F5 (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.8e-72
Identity = 155/298 (52.01%), Postives = 198/298 (66.44%), Query Frame = 0


Query: 66  PLTLYGDSTHADSTSSSKTISSHLYQTR-------VVQDHQEMVNRHSLCLTHLREATEE 125
           P +  G S  A ++SS   +SS LY  +       ++Q  Q+MVNR +LC T L EA+ E
Sbjct: 7   PFSYSGSS--AGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLE 66

Query: 126 ADALRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPF----NFVEGFRGLSVSE 185
           A+ALR EN  LRS+N  L   L+ LI +S+Q ++   D   P     N   G       E
Sbjct: 67  AEALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVE 126

Query: 186 KGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAG---TSQG 245
               +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q 
Sbjct: 127 NQNRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQS 186

Query: 246 GKVRAS-SRPRTASPVKVTQKVYVQG---VKEEEKPLELEVYNQGMFKTELCNKWQETGS 305
           GK R + ++P T   V  TQKVYV+G    +++E+ +E+EVYNQGM KTELCNKWQETG+
Sbjct: 187 GKPRGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGT 246

Query: 306 CPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 346
           CPYGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Sbjct: 247 CPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 294

[Close]

BLAST of Clc01G06300 vs. ExPASy Swiss-Prot
Match: Q6L5G1 (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-54
Identity = 130/282 (46.10%), Postives = 166/282 (58.87%), Query Frame = 0


Query: 77  DSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL 136
           D   ++      L+   +   +QEM NR  LCL+HL +A +EA ALRQEN  LR  N++L
Sbjct: 82  DGAGAAAATEHRLHLAHLALQYQEMANRFELCLSHLADAADEAAALRQENAELRVANNDL 141

Query: 137 SKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPTSVMEG 196
           +  ++         ++G   Q+         R L +  K  +  A        P ++M  
Sbjct: 142 ACRIA---------KFGGR-QSSAIALAGDLRRLRL-PKEQTVPALPPPPQSPPAALM-- 201

Query: 197 GRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKV-TQKVYV- 256
                V  ++  LPKSIS+RS GY K+     +QGGK R S       PV V +Q+V+V 
Sbjct: 202 -NPVAVPEKQAVLPKSISIRSTGYQKL-----NQGGKHRVS------KPVNVGSQRVFVG 261

Query: 257 ----------QGVKEEEKP---LELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIE 316
                      GVK+EE P   LE EVYNQGMFKTELCNKW+ETG+CPYGD CQFAHG+ 
Sbjct: 262 IDGAEGGEHKVGVKKEEPPMGGLEFEVYNQGMFKTELCNKWEETGACPYGDQCQFAHGVA 321

Query: 317 ELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQER 344
           ELRPVIRHPRYKT+VCRMVLAG VCPYGHRCHFRH++T  +R
Sbjct: 322 ELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSITPADR 338

[Close]

BLAST of Clc01G06300 vs. ExPASy Swiss-Prot
Match: A2ZVY5 (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.3e-54
Identity = 134/311 (43.09%), Postives = 172/311 (55.31%), Query Frame = 0


Query: 52  SPIFAPKQSVPVSLPLTLYGDSTHA------DSTSSSKTISSHLYQTRVVQDHQEMVNRH 111
           SP F      P++  ++L   S+ +      D  +++      L   R+   +QE+ +R+
Sbjct: 47  SPSFGFSSPSPLATSVSLSPSSSASLVDDGDDGGAAADATGQRLQLARLALQYQEVADRY 106

Query: 112 SLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPFNFVE 171
            LCL+HL EA EEA ALR EN  LR  N +L+  L+LL          S          +
Sbjct: 107 ELCLSHLAEAAEEAAALRLENAELRVTNSDLALRLALL----------SGKHTAAVAVAD 166

Query: 172 GFRGLSVSEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ 231
             R L + E+  +++  E   ++                    LPKSISVRS  YLK+ Q
Sbjct: 167 EIRRLRLGEQKVAAATKERTPEKLAV-----------------LPKSISVRSTSYLKLNQ 226

Query: 232 AGTSQGGKVRASSR-PRTAS-PVKV--TQKVYVQGVKEEEKP-------LELEVYNQGMF 291
              +      A +R PRT+S P     +Q+ Y  G K +E+         ELEVYNQGMF
Sbjct: 227 QSQAATATSAAPNRKPRTSSNPTNPPNSQRAYDGGKKGDEQKAQPADSGAELEVYNQGMF 286

Query: 292 KTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHF 346
           KTELCNKW+ETG CPYGD CQFAHG+ ELRPVIRHPRYKT VCRMVLAG VCPYGHRCHF
Sbjct: 287 KTELCNKWEETGDCPYGDQCQFAHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHF 330

[Close]

BLAST of Clc01G06300 vs. ExPASy Swiss-Prot
Match: Q9C9N3 (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 7.3e-54
Identity = 146/347 (42.07%), Postives = 186/347 (53.60%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSS----SQLKSQLQTND-------VYASLYNSPIFAPKQSV 72
           M K   S    +A  T ++SS    S +  Q   N         +ASLYNS IF+P+   
Sbjct: 1   MEKLAASTVTDLACVTAINSSPPPLSPISEQSFNNKHQEEFAASFASLYNS-IFSPESLS 60

Query: 73  PVSLPLTLYGDSTHADSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADA 132
           P   P +     +  D+T+  +     L Q +++ ++ E+   + LCL  L+    E D+
Sbjct: 61  P--SPPSSSSPPSRVDTTTEHR-----LLQAKLILEYDELNEHYELCLNRLQSLMTELDS 120

Query: 133 LRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSA 192
           LR EN  LR  N +L K    LI  S       S  AP  N    FR      + A  + 
Sbjct: 121 LRHENDSLRFENSDLLK----LIRISTSSSSSVSPPAPIHN--RQFRHQISDSRSAKRN- 180

Query: 193 WEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKM---AQAGTSQGGKVRASS 252
                                  ER SLPKSISVRS GYLK+    +A   Q  ++ ++S
Sbjct: 181 ---------------------NQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNS 240

Query: 253 RPRTASPVKVTQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAH 312
                  V  +QKV V   K E + LELEVY QGM KTELCNKWQETG+C YGD+CQFAH
Sbjct: 241 -------VSSSQKVCVVQTKGEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAH 300

Query: 313 GIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 346
           GI+ELRPVIRHPRYKTEVCRM++ G +CPYGHRCHFRH+LTDQER+M
Sbjct: 301 GIDELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQERMM 304

[Close]

BLAST of Clc01G06300 vs. ExPASy Swiss-Prot
Match: Q10MN8 (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301500 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-30
Identity = 91/255 (35.69%), Postives = 122/255 (47.84%), Query Frame = 0


Query: 101 MVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLI-HASVQKQYGSSDQAP 160
           +  R+  C   LR+A  E   L +E + L + N     HLSLL+     +++  +S  AP
Sbjct: 233 IAERYDDCFLRLRDAAAELSDLHRERLRLAAEN----LHLSLLLEELESEQRKQASAMAP 292

Query: 161 PFNFVEGFRGLSVSEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNG 220
           P                                     ++E  E  +   PKSIS+RS G
Sbjct: 293 P-------------------------------------KLEEDEAAQGGAPKSISIRSPG 352

Query: 221 YLKMAQ---AGTSQGGKVRASSRPRTASPVKV---------TQKVYVQGVKEEEK----- 280
           YL           Q  +VRAS     + P  +          ++    G +E+E+     
Sbjct: 353 YLSQKPPQGQARPQRLRVRASQAMEISHPNCLIFVMGNQCSPKEAAAAGDEEDEEDKGGG 412

Query: 281 PLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLA 338
            +E+E Y QG  KTELCNKW E G+CPYG  C+FAHG++ELRPVIRHPRYKT  C+M  A
Sbjct: 413 EVEVEAYRQGAAKTELCNKW-ERGACPYGARCRFAHGLQELRPVIRHPRYKTLPCQMFAA 445

[Close]

BLAST of Clc01G06300 vs. ExPASy TrEMBL
Match: A0A1S3CSW3 (zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504589 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.4e-185
Identity = 336/351 (95.73%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNFVEGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVTQK
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of Clc01G06300 vs. ExPASy TrEMBL
Match: A0A5D3E4G4 (Zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00010 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.1e-185
Identity = 335/351 (95.44%), Postives = 342/351 (97.44%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTND YASLYNSPIFAPKQ VPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDAYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNFVEGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVTQK
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of Clc01G06300 vs. ExPASy TrEMBL
Match: A0A0A0KPN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576700 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.2e-185
Identity = 334/351 (95.16%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S+SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNF EGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVTQK
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of Clc01G06300 vs. ExPASy TrEMBL
Match: A0A1S3CT37 (zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504589 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.7e-183
Identity = 335/351 (95.44%), Postives = 342/351 (97.44%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLPLTLYGD
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 73  STHADST-SSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 132
           STHADS+ S SK+I++H YQTRVVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 133 INHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPT 192
           INHELSKHLSLLI ASVQKQYGSSDQAPPFNFVEGFRGLS++EKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 193 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQK 252
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ GTSQGGK+RASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240

Query: 253 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 312
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 313 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT-TTPKLDR 362
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRT TTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 350

[Close]

BLAST of Clc01G06300 vs. ExPASy TrEMBL
Match: A0A6J1FK54 (zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444951 PE=4 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.5e-182
Identity = 329/349 (94.27%), Postives = 336/349 (96.28%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPLTLYGD 72
           MHKSTTSASNTIAA TTMSSSSQLKSQLQTN+VYASLYNS IFAPKQSVPVSLP TLYGD
Sbjct: 1   MHKSTTSASNTIAAGTTMSSSSQLKSQLQTNNVYASLYNSSIFAPKQSVPVSLPSTLYGD 60

Query: 73  STHADSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSI 132
           STH DS S+SK+I++HLYQT VVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSI
Sbjct: 61  STHTDSISASKSINNHLYQTCVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSI 120

Query: 133 NHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSAWEDISDESPTS 192
           NHELSKHLSLLIHASVQKQYGSSDQ PPFNFVEGFRGLSV+EKGASSS WEDISDESPTS
Sbjct: 121 NHELSKHLSLLIHASVQKQYGSSDQTPPFNFVEGFRGLSVAEKGASSSTWEDISDESPTS 180

Query: 193 VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAGTSQGGKVRASSRPRTASPVKVTQKV 252
           VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ G+SQGGKVR SSRPRTASPVKVTQKV
Sbjct: 181 VMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQGGSSQGGKVRVSSRPRTASPVKVTQKV 240

Query: 253 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 312
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 313 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTTTPKLDR 362
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMG LKPTCR T PKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPTCR-TAPKLDR 348

[Close]

BLAST of Clc01G06300 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 272.3 bits (695), Expect = 5.5e-73
Identity = 155/298 (52.01%), Postives = 198/298 (66.44%), Query Frame = 0


Query: 66  PLTLYGDSTHADSTSSSKTISSHLYQTR-------VVQDHQEMVNRHSLCLTHLREATEE 125
           P +  G S  A ++SS   +SS LY  +       ++Q  Q+MVNR +LC T L EA+ E
Sbjct: 7   PFSYSGSS--AGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLE 66

Query: 126 ADALRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPF----NFVEGFRGLSVSE 185
           A+ALR EN  LRS+N  L   L+ LI +S+Q ++   D   P     N   G       E
Sbjct: 67  AEALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVE 126

Query: 186 KGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAG---TSQG 245
               +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q 
Sbjct: 127 NQNRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQS 186

Query: 246 GKVRAS-SRPRTASPVKVTQKVYVQG---VKEEEKPLELEVYNQGMFKTELCNKWQETGS 305
           GK R + ++P T   V  TQKVYV+G    +++E+ +E+EVYNQGM KTELCNKWQETG+
Sbjct: 187 GKPRGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGT 246

Query: 306 CPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 346
           CPYGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Sbjct: 247 CPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 294

[Close]

BLAST of Clc01G06300 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 265.8 bits (678), Expect = 5.2e-71
Identity = 154/298 (51.68%), Postives = 197/298 (66.11%), Query Frame = 0


Query: 66  PLTLYGDSTHADSTSSSKTISSHLYQTR-------VVQDHQEMVNRHSLCLTHLREATEE 125
           P +  G S  A ++SS   +SS LY  +       ++Q  Q+MVNR +LC T L EA+ E
Sbjct: 7   PFSYSGSS--AGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLE 66

Query: 126 ADALRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPF----NFVEGFRGLSVSE 185
           A+ALR EN  LRS+N  L   L+ LI +S+Q ++   D   P     N   G       E
Sbjct: 67  AEALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVE 126

Query: 186 KGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQAG---TSQG 245
               +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q 
Sbjct: 127 NQNRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQS 186

Query: 246 GKVRAS-SRPRTASPVKVTQKVYVQG---VKEEEKPLELEVYNQGMFKTELCNKWQETGS 305
           GK R + ++P T   V  T KVYV+G    +++E+ +E+EVYNQGM KTELCNKWQETG+
Sbjct: 187 GKPRGTVTKPGTCGQVSTT-KVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGT 246

Query: 306 CPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 346
           CPYGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Sbjct: 247 CPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 293

[Close]

BLAST of Clc01G06300 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 212.6 bits (540), Expect = 5.2e-55
Identity = 146/347 (42.07%), Postives = 186/347 (53.60%), Query Frame = 0


Query: 13  MHKSTTSASNTIAAATTMSSS----SQLKSQLQTND-------VYASLYNSPIFAPKQSV 72
           M K   S    +A  T ++SS    S +  Q   N         +ASLYNS IF+P+   
Sbjct: 1   MEKLAASTVTDLACVTAINSSPPPLSPISEQSFNNKHQEEFAASFASLYNS-IFSPESLS 60

Query: 73  PVSLPLTLYGDSTHADSTSSSKTISSHLYQTRVVQDHQEMVNRHSLCLTHLREATEEADA 132
           P   P +     +  D+T+  +     L Q +++ ++ E+   + LCL  L+    E D+
Sbjct: 61  P--SPPSSSSPPSRVDTTTEHR-----LLQAKLILEYDELNEHYELCLNRLQSLMTELDS 120

Query: 133 LRQENIHLRSINHELSKHLSLLIHASVQKQYGSSDQAPPFNFVEGFRGLSVSEKGASSSA 192
           LR EN  LR  N +L K    LI  S       S  AP  N    FR      + A  + 
Sbjct: 121 LRHENDSLRFENSDLLK----LIRISTSSSSSVSPPAPIHN--RQFRHQISDSRSAKRN- 180

Query: 193 WEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKM---AQAGTSQGGKVRASS 252
                                  ER SLPKSISVRS GYLK+    +A   Q  ++ ++S
Sbjct: 181 ---------------------NQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNS 240

Query: 253 RPRTASPVKVTQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAH 312
                  V  +QKV V   K E + LELEVY QGM KTELCNKWQETG+C YGD+CQFAH
Sbjct: 241 -------VSSSQKVCVVQTKGEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAH 300

Query: 313 GIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 346
           GI+ELRPVIRHPRYKTEVCRM++ G +CPYGHRCHFRH+LTDQER+M
Sbjct: 301 GIDELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQERMM 304

[Close]

BLAST of Clc01G06300 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 55.8 bits (133), Expect = 8.1e-08
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 0


Query: 274 FKTELCNKWQETGSCPYGDHCQFAHGIEEL 304
           +KT +CNKWQ TG CP+G HC FAHG  EL
Sbjct: 144 WKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]

BLAST of Clc01G06300 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-06
Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 0


Query: 266 LEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEEL 304
           +++     +KT +CNKW+ TG CP+G  C FAHG  EL
Sbjct: 253 IQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

The following BLAST results are available for this feature:

BLAST of Clc01G06300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875724.1	5.2e-190	97.42	zinc finger CCCH domain-containing protein 15-like isoform X1 [Benincasa hispida...	[more]
XP_038875725.1	3.7e-188	97.13	zinc finger CCCH domain-containing protein 15-like isoform X2 [Benincasa hispida...	[more]
XP_008467171.1	5.0e-185	95.73	PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumi...	[more]
KAA0046296.1	1.5e-184	95.44	zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var....	[more]
XP_004151447.1	1.9e-184	95.16	zinc finger CCCH domain-containing protein 15 isoform X1 [Cucumis sativus]	[more]

BLAST of Clc01G06300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9F5	7.8e-72	52.01	Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L5G1	1.9e-54	46.10	Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX...	[more]
A2ZVY5	3.3e-54	43.09	Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=...	[more]
Q9C9N3	7.3e-54	42.07	Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q10MN8	4.3e-30	35.69	Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. ja...	[more]

BLAST of Clc01G06300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSW3	2.4e-185	95.73	zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo OX...	[more]
A0A5D3E4G4	7.1e-185	95.44	Zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo va...	[more]
A0A0A0KPN3	9.2e-185	95.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576700 PE=4 SV=1	[more]
A0A1S3CT37	1.7e-183	95.44	zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucumis melo OX...	[more]
A0A6J1FK54	2.5e-182	94.27	zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucurbita mosch...	[more]

BLAST of Clc01G06300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68200.1	5.5e-73	52.01	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	5.2e-71	51.68	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G66810.1	5.2e-55	42.07	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G35430.1	8.1e-08	66.67	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	2.0e-06	47.37	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	GENE3D	4.10.1000.10		coord: 307..343 e-value: 1.5E-9 score: 39.0 coord: 267..306 e-value: 1.6E-18 score: 67.8
None	No IPR available	PANTHER	PTHR12547:SF141	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15	coord: 63..350
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 63..350
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 273..300 e-value: 5.1E-9 score: 46.0 coord: 311..338 e-value: 3.8E-4 score: 29.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 274..299 e-value: 5.5E-12 score: 45.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 311..339 score: 12.802603
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 273..301 score: 16.492517
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 270..305
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 307..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G06300.2	Clc01G06300.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding