Clc01G05590 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G05590
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CDGSH iron-sulfur domain-containing protein NEET
Location	ClcChr01: 5209042 .. 5210389 (+)
RNA-Seq Expression	Clc01G05590
Synteny	Clc01G05590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACCCATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCATAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGGTTCCTTTTCTTTTCTTTCTCATTATTTCCCTTTTATTCTCTTTCTCACTAAGTTAATTAGAATTAAAATGGGGGAGGAATTAGAAATTTTACTTTCTTAGATCATTTTTTTTTTCTCATTTTTTTCCTCAATTTTTTTTAGGTTTAAATGTTATTTTTGTAACAATTTTAGTTCATTTTGGTGGTTGAACTTTCAAACATTAGTCATTTAGACCTCTTAAAAATGAGGTCAAAATGAAAATGAAGAGACAAAAAAATGTCACTTTTTGAAAGTAAAGGACCAAAGTAAACATTGTTGATGCAAAATTTGGGGCTTGGAAAAGGCACCTAGCCCCCCCTTACATGACCCTCACCACGACACCAACTCTTATCTTAAGAGAACTAAATAATAGAGAATAAATCATAAGTTTTTAGATATCTTTAATGGAGGCATTATGGTATATTTACAGGGGATTTGATACCAGATTTATCTTAAATCTACTAAGATTAGGATATCAGATTTTTCAATTTCATTTTATCTTATTTTATATTATCTCATACTATTTTGATTTTTGCTTTATTTCATTAGGTTGAAATTCATTTCTCAACAAACATTTTGAAAATATAGGGACAAAAATTAATTAAAAAAAACCAAATAGGGACCAAAGTAGTATTCAAAACCTTGATTATTAATGTAATATAGGGACTAAATTAGAAAAATCTTTTTGTGCAAAAATTTACAATCCATAAAAGTAGAGCGTTTAAATTATTATTATTATTTATTTATTTATTTTTATTTTTATTTTATTTTATTTTATTTGTATATCTTATAAATGGGTCCGTTTTATATTTCTTTGGAGTACATTGAATAAATGAAATTGTTTGGGACTAAATTGGAAAACCTTAAAAAGATAAGGGAGTAAATTGAAAATTTGGTGAAAGATGTATGTTTTGAGTGCAGATGTTGGAGGTCAGCCACATTTCCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG

mRNA sequence

ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACCCATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCATAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGATGTTGGAGGTCAGCCACATTTCCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG

Coding sequence (CDS)

ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACCCATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCATAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGATGTTGGAGGTCAGCCACATTTCCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG

Protein sequence

MELQKAYALHTFITHYFSTSPHQHISANHCTMASIVPISAPSSLSIRTHPPHPNFNARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Homology

[Close]

BLAST of Clc01G05590 vs. NCBI nr
Match: XP_038876467.1 (CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40
Identity = 88/107 (82.24%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 32  MASIVPISAPSSLSIRTHPPHPNF---NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDS 91
           MASIV IS PSSLSI + PPH NF     R  VVVRA+ GSGGEPINPAIRKTEDKVVDS
Sbjct: 1   MASIVAISLPSSLSITSRPPHSNFIGSGRRSTVVVRAQ-GSGGEPINPAIRKTEDKVVDS 60

Query: 92  VLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           VLI +LSKPLTPYCRCWRSATFP+CDGSHVKHNKATGDNVGPLLLK+
Sbjct: 61  VLIAELSKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKQ 106

[Close]

BLAST of Clc01G05590 vs. NCBI nr
Match: XP_004143713.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus] >KGN50388.1 hypothetical protein Csa_000068 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-39
Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 32  MASIVPISAP-SSLSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVD 91
           MASI+PIS+P SSLS R H    NFN    RR VVVRAEGGS GE INPAIRK+EDKVVD
Sbjct: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60

Query: 92  SVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           SVL+ +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of Clc01G05590 vs. NCBI nr
Match: XP_008467263.1 (PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo] >KAA0055137.1 CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-33
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 32  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MASIV IS+P SSLS R     P +FN    RR VVVRAE GS GE INPAIRK+E+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of Clc01G05590 vs. NCBI nr
Match: XP_022996357.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 3.3e-33
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 32  MASIVPISAPSSLSIRTHPPHPNFNA-----RRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MAS+   SA  +    T PPH NF       RRMVVVRAE   GGE INPAIRK+EDKVV
Sbjct: 1   MASLAATSALPT----TRPPHGNFTVGGMPRRRMVVVRAE---GGEAINPAIRKSEDKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 102

[Close]

BLAST of Clc01G05590 vs. NCBI nr
Match: XP_023534172.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.0 bits (380), Expect = 7.4e-33
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 32  MASIVPISAPSSLSIRTHPPHPNFN-----ARRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MAS+   SA  +    T PPH NF       RRMVVVRAE   GGE INPAIRK+EDKVV
Sbjct: 1   MASLPATSALPT----TRPPHVNFTLGGMPRRRMVVVRAE---GGEAINPAIRKSEDKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 102

[Close]

BLAST of Clc01G05590 vs. ExPASy Swiss-Prot
Match: Q9FLI7 (CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702 GN=NEET PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-31
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 58  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSH 117
           +RMVVVRAEGG G   INP IRK EDKVVDSV++ +LSK +TPYCRCWRS TFP+CDGSH
Sbjct: 33  QRMVVVRAEGGGG---INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSH 92

Query: 118 VKHNKATGDNVGPLLLKK 136
           VKHNKA GDNVGPLLLKK
Sbjct: 93  VKHNKANGDNVGPLLLKK 107

[Close]

BLAST of Clc01G05590 vs. ExPASy Swiss-Prot
Match: Q7T326 (CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-17
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of Clc01G05590 vs. ExPASy Swiss-Prot
Match: C1BI29 (CDGSH iron-sulfur domain-containing protein 2A OS=Oncorhynchus mykiss OX=8022 GN=cisd2a PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-17
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L++    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLEIQKENPKVVNEIDIEDLNRTNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of Clc01G05590 vs. ExPASy Swiss-Prot
Match: Q6PCF8 (CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd2-a PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-17
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of Clc01G05590 vs. ExPASy Swiss-Prot
Match: Q6AZG1 (CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd2-b PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-17
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 74  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLL 133
           IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 134 KK 136
           KK
Sbjct: 131 KK 132

[Close]

BLAST of Clc01G05590 vs. ExPASy TrEMBL
Match: A0A0A0KL88 (ZnF_CDGSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171700 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 32  MASIVPISAP-SSLSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVD 91
           MASI+PIS+P SSLS R H    NFN    RR VVVRAEGGS GE INPAIRK+EDKVVD
Sbjct: 1   MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVD 60

Query: 92  SVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           SVL+ +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  SVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of Clc01G05590 vs. ExPASy TrEMBL
Match: A0A5A7UKN7 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00670 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 9.5e-34
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 32  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MASIV IS+P SSLS R     P +FN    RR VVVRAE GS GE INPAIRK+E+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of Clc01G05590 vs. ExPASy TrEMBL
Match: A0A1S3CTC1 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo OX=3656 GN=LOC103504660 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 9.5e-34
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 32  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MASIV IS+P SSLS R     P +FN    RR VVVRAE GS GE INPAIRK+E+KVV
Sbjct: 1   MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of Clc01G05590 vs. ExPASy TrEMBL
Match: A0A6J1K1P5 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=LOC111491613 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 32  MASIVPISAPSSLSIRTHPPHPNFNA-----RRMVVVRAEGGSGGEPINPAIRKTEDKVV 91
           MAS+   SA  +    T PPH NF       RRMVVVRAE   GGE INPAIRK+EDKVV
Sbjct: 1   MASLAATSALPT----TRPPHGNFTVGGMPRRRMVVVRAE---GGEAINPAIRKSEDKVV 60

Query: 92  DSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           DSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  DSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 102

[Close]

BLAST of Clc01G05590 vs. ExPASy TrEMBL
Match: A0A6J1E4B9 (CDGSH iron-sulfur domain-containing protein NEET OS=Momordica charantia OX=3673 GN=LOC111025950 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31
Identity = 77/114 (67.54%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 32  MASIVPISAPSSLSI-RTHPPHPNF---------NARRMVVVRAEGGSGGEPINPAIRKT 91
           MASI+   A S  SI  TH  H N            RR+ VVRAE  +G EPINPAIRK+
Sbjct: 1   MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAE--AGAEPINPAIRKS 60

Query: 92  EDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK 136
           EDKVVDSVL+  L+KPLT YCRCWRSATFP+CDGSHVKHNKATGDNVGPLLLKK
Sbjct: 61  EDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 112

[Close]

BLAST of Clc01G05590 vs. TAIR 10
Match: AT5G51720.1 (2 iron, 2 sulfur cluster binding )

HSP 1 Score: 135.6 bits (340), Expect = 3.0e-32
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 58  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSH 117
           +RMVVVRAEGG G   INP IRK EDKVVDSV++ +LSK +TPYCRCWRS TFP+CDGSH
Sbjct: 33  QRMVVVRAEGGGG---INPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSH 92

Query: 118 VKHNKATGDNVGPLLLKK 136
           VKHNKA GDNVGPLLLKK
Sbjct: 93  VKHNKANGDNVGPLLLKK 107

The following BLAST results are available for this feature:

BLAST of Clc01G05590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876467.1	2.2e-40	82.24	CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]	[more]
XP_004143713.1	9.1e-39	79.63	CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus] >KGN50388.1 h...	[more]
XP_008467263.1	2.0e-33	77.06	PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo] >KAA0...	[more]
XP_022996357.1	3.3e-33	71.56	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]	[more]
XP_023534172.1	7.4e-33	71.56	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc01G05590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLI7	4.2e-31	79.49	CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702...	[more]
Q7T326	2.7e-17	61.29	CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE...	[more]
C1BI29	5.9e-17	59.68	CDGSH iron-sulfur domain-containing protein 2A OS=Oncorhynchus mykiss OX=8022 GN...	[more]
Q6PCF8	5.9e-17	61.29	CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd...	[more]
Q6AZG1	5.9e-17	61.29	CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd...	[more]

BLAST of Clc01G05590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL88	4.4e-39	79.63	ZnF_CDGSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171700 P...	[more]
A0A5A7UKN7	9.5e-34	77.06	CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CTC1	9.5e-34	77.06	CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1K1P5	1.6e-33	71.56	CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1E4B9	1.2e-31	67.54	CDGSH iron-sulfur domain-containing protein NEET OS=Momordica charantia OX=3673 ...	[more]

BLAST of Clc01G05590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51720.1	3.0e-32	79.49	2 iron, 2 sulfur cluster binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018967	Iron-binding zinc finger, CDGSH type	SMART	SM00704	znf_cdgsh	coord: 84..123 e-value: 2.4E-7 score: 40.4
IPR018967	Iron-binding zinc finger, CDGSH type	PFAM	PF09360	zf-CDGSH	coord: 99..117 e-value: 4.7E-8 score: 33.2
IPR042216	MitoNEET, CDGSH iron-sulfur domain	GENE3D	3.40.5.90		coord: 90..135 e-value: 1.2E-22 score: 81.1
IPR045131	CDGSH iron-sulfur domain-containing protein 1/2	PANTHER	PTHR13680	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 14..135
None	No IPR available	PANTHER	PTHR13680:SF5	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 14..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G05590.1	Clc01G05590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0010150	leaf senescence
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0010506	regulation of autophagy
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding