Clc01G05050 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G05050
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Phytocyanin domain-containing protein
Location	ClcChr01: 4686877 .. 4688938 (-)
RNA-Seq Expression	Clc01G05050
Synteny	Clc01G05050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGGAGGAGATTAAAGTGGGTGATTGATTGATTGATTGTAATGGGAAATAATATATGGGTTTGTGTTTTAATGGTGATTGGAGGGCTTGTATTAAGGTGCAATGCCACAACATATATTGTAGGAGATACTTCTGGTTGGGATATCAGCACTGATCTTGATACTTGGTCTCAAGGCAAGAGGTTTTTTGTGGGAGATGTTCTTGGTATTATTATATCTATCTATATATATTATATTACTCATCTACATTTATATGTATATTTATTAGGTTTTTTTCTATCTATTTTTTAAATTTTAAACTCATTTGTATTAGGACCTCGTTTCATAACTATTATTTGATTTTTAGAGTTTGGTTGTAAAAATTAAGCTTATAAACATACTTCTCCACCTCTAAATTTATTATTTTCTTATCTACTTTTTACTAATGTTTTAAAAAATTAAGTCAAGTTTTGAAACCTAAAAAGAAAAAAAATTTTAAAAACTTATTTTTGTTATTTAAATTTGGCTAGAAGTTTTAACTATTTTACTTAAGAAAAATGTACAACATTGTAAGAAGTTGAGAGAAAATAGATTTGATTTTCAAAAACCAAAAACCAAACACTAAAGCCCCGTTTGGTAACCATTTCGTTTTTTGTTTTTGGTTTTTGGAAATTAAGCTCATTTCTTCACATTCTCTTACAAATGGTTTGCATGTCTTTTGAGTAGAGTACATGAGTTGAATTCTTAGCCAAATTTCAAAAACAAAAACAAGTTTCTAAAAGCTACATTTTTTTTTCTTTTTTTTTTTTTGTTAAATTTGGTTTAGTTTTTGAAAACATGGGTAAAATATAGATAAAAAAGCAAGACATTTAAGGGTGAGAGAGGTGTTTGTAGACTTCATTTTAAAAAACCAAATAGCTACGAAACATAGCCAGACCTAAAATCTTTAATTTGATTCTTCATTTCAAATAAAGTGTTTTATTGTCATTAAATGTTAATGAGTAGATTAGTTTTAATTTCTAAATTTTCGTAGTCTACCTTCTTTTATATTTCTTTTAGAAGTACGAAAAACGTATCAAACAACTCAAAATATTCTATCTTGTCAACCAACAAGATATCTTTTGCTATAATTATAACAACAAATTATATGGATTTGATTAAATTATGTATGTTATGTTACGTATGAAATTAGTAGGCCTTCAAAGTTTTTGTAGTTGCATATGTTTATTTCTTCAAATTAAAACATAAAGGTTTGCCATTTCATTGATAAAATGTGCATTATGACATTATATTTTTATTCTATCAATGAATTATACCATTTCAAAGACTAGATTGAAAAAGATCATTGTATCAAAAATCAAAACAATTAAGAATCATTCTTTTTAAAAAATAAAATAAAATAAAAAAAAATTAAGAAAGACTATTGCATGGGTGCAAGAAGTTTGTAAATTAAATAGAGTGAATATTTAAATATGTTGAGTATATAAAATATTTTATTGTATTTAATTTAGGGGTAGTTTAAGTTTAGAAATAATATTGAATCGATAGTTAGTGATTTTGCAGTTATGGCCAATATTCTAATTTCATTTATGTCCATATATTGTAGTGTTTCAATACTCTTCATCGGCAAGCTTAAACGAAGTGACAAGAGAGAATTTCAACACGTGCAACACCACCAACGTTTTAAAAGCTTACTCCTCCGGAAACACCACCGTCACGTTGTCGAAGCCCGGCCAGAGATTCTTCGTTTCCGGCAACAGGTTGCTCTGTCTCGGCGGCATGAAGTTGCAAGTCAACGTCGAGAACAACCAATCATTCTCCCCCGCCGCCGCTCCTCACCCACCGCCACAGTCCGACGCCCTCCCCCGACCTTCTTCCAAAACTGACAACAACGGTGTTCCGAGCGCCTCCGCCGACTTTCTTATCGGTGGAAAAAAGGCTCTTGCGATTGTCTTTGTGTGTTATGTCATCTCTACATCCTTTATTGTGTTTTGATAAATAATATTTGACTTTTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTATAATTTTATTGGAGAAGTTGGTGTATGATAATCTAAC

mRNA sequence

CAAAGGAGGAGATTAAAGTGGGTGATTGATTGATTGATTGTAATGGGAAATAATATATGGGTTTGTGTTTTAATGGTGATTGGAGGGCTTGTATTAAGGTGCAATGCCACAACATATATTGTAGGAGATACTTCTGGTTGGGATATCAGCACTGATCTTGATACTTGGTCTCAAGGCAAGAGGTTTTTTGTGGGAGATGTTCTTGTGTTTCAATACTCTTCATCGGCAAGCTTAAACGAAGTGACAAGAGAGAATTTCAACACGTGCAACACCACCAACGTTTTAAAAGCTTACTCCTCCGGAAACACCACCGTCACGTTGTCGAAGCCCGGCCAGAGATTCTTCGTTTCCGGCAACAGGTTGCTCTGTCTCGGCGGCATGAAGTTGCAAGTCAACGTCGAGAACAACCAATCATTCTCCCCCGCCGCCGCTCCTCACCCACCGCCACAGTCCGACGCCCTCCCCCGACCTTCTTCCAAAACTGACAACAACGGTGTTCCGAGCGCCTCCGCCGACTTTCTTATCGGTGGAAAAAAGGCTCTTGCGATTGTCTTTGTGTGTTATGTCATCTCTACATCCTTTATTGTGTTTTGATAAATAATATTTGACTTTTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTATAATTTTATTGGAGAAGTTGGTGTATGATAATCTAAC

Coding sequence (CDS)

ATGGGAAATAATATATGGGTTTGTGTTTTAATGGTGATTGGAGGGCTTGTATTAAGGTGCAATGCCACAACATATATTGTAGGAGATACTTCTGGTTGGGATATCAGCACTGATCTTGATACTTGGTCTCAAGGCAAGAGGTTTTTTGTGGGAGATGTTCTTGTGTTTCAATACTCTTCATCGGCAAGCTTAAACGAAGTGACAAGAGAGAATTTCAACACGTGCAACACCACCAACGTTTTAAAAGCTTACTCCTCCGGAAACACCACCGTCACGTTGTCGAAGCCCGGCCAGAGATTCTTCGTTTCCGGCAACAGGTTGCTCTGTCTCGGCGGCATGAAGTTGCAAGTCAACGTCGAGAACAACCAATCATTCTCCCCCGCCGCCGCTCCTCACCCACCGCCACAGTCCGACGCCCTCCCCCGACCTTCTTCCAAAACTGACAACAACGGTGTTCCGAGCGCCTCCGCCGACTTTCTTATCGGTGGAAAAAAGGCTCTTGCGATTGTCTTTGTGTGTTATGTCATCTCTACATCCTTTATTGTGTTTTGA

Protein sequence

MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSFIVF

Homology

[Close]

BLAST of Clc01G05050 vs. NCBI nr
Match: XP_038877141.1 (stellacyanin-like [Benincasa hispida])

HSP 1 Score: 332.0 bits (850), Expect = 3.2e-87
Identity = 167/181 (92.27%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 3   NNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA 62
           NNIWV VL+VIGG  LRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA
Sbjct: 4   NNIWVMVLVVIGGFALRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA 63

Query: 63  SLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENN 122
           SLNEVTRENFNTCNTTNVLKAYSSGNTT+TLS+PGQRFFVS NRLLCLGGMKLQVNVENN
Sbjct: 64  SLNEVTRENFNTCNTTNVLKAYSSGNTTITLSQPGQRFFVSANRLLCLGGMKLQVNVENN 123

Query: 123 QSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSFIV 182
           QSFSPA AP PP QSD LPRPSSKTDNNGVPSASA F+IGGK+ALAIVFVCYVISTSFIV
Sbjct: 124 QSFSPATAPQPPTQSDTLPRPSSKTDNNGVPSASASFVIGGKEALAIVFVCYVISTSFIV 183

Query: 183 F 184
           F
Sbjct: 184 F 184

[Close]

BLAST of Clc01G05050 vs. NCBI nr
Match: XP_023549499.1 (stellacyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 3.8e-80
Identity = 152/181 (83.98%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 60
           M  NIWV VL++IGGL L CNATTYIVGDTSGWDISTDLD WSQGKRF+VGDVLVFQYSS
Sbjct: 5   MAKNIWVYVLVIIGGLALSCNATTYIVGDTSGWDISTDLDAWSQGKRFYVGDVLVFQYSS 64

Query: 61  SASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVE 120
           S SLNEVTREN+NTCNTTNVLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVE
Sbjct: 65  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 124

Query: 121 NNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSF 180
           NNQSFSPAAAP PPPQS+ LPRPSSKTDN+GVPS S   +IGGK+AL IVF CYVIS +F
Sbjct: 125 NNQSFSPAAAPQPPPQSNGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 184

Query: 181 I 182
           I
Sbjct: 185 I 185

[Close]

BLAST of Clc01G05050 vs. NCBI nr
Match: XP_022969745.1 (stellacyanin [Cucurbita maxima])

HSP 1 Score: 308.1 bits (788), Expect = 4.9e-80
Identity = 151/182 (82.97%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 60
           M NNIWV VL++IGGL L CNA TYIVGDTSGWDISTDLDTWSQGKRF+VGDVLVFQYSS
Sbjct: 3   MANNIWVYVLVIIGGLALSCNAATYIVGDTSGWDISTDLDTWSQGKRFYVGDVLVFQYSS 62

Query: 61  SASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVE 120
           S SLNEVTREN+NTCNTT VLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTKVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSF 180
           NNQSFSPAAAP PPPQSD LPRPSSKTDN+G+PS S   +IGGK+AL IV  CYVIS +F
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGIPSGSTRHVIGGKEALGIVLACYVISLAF 182

Query: 181 IV 183
           I+
Sbjct: 183 II 184

[Close]

BLAST of Clc01G05050 vs. NCBI nr
Match: KAG6579635.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 151/181 (83.43%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 60
           M  NI V VLM+IGGL L CNA TYIVGDTSGWDISTDLD+WSQGKRF+VGDVLVFQYSS
Sbjct: 5   MAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYVGDVLVFQYSS 64

Query: 61  SASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVE 120
           S SLNEVTREN+NTCNTTNVLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVE
Sbjct: 65  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 124

Query: 121 NNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSF 180
           NNQSFSPAAAP PPPQS++LPRPSSKTDN+GVPS S   +IGGK+AL IVF CYVIS +F
Sbjct: 125 NNQSFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 184

Query: 181 I 182
           I
Sbjct: 185 I 185

[Close]

BLAST of Clc01G05050 vs. NCBI nr
Match: XP_022929168.1 (stellacyanin [Cucurbita moschata])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 151/181 (83.43%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 60
           M  NI V  LM+IGGL L CNA TYIVGDTSGWDISTDLD+WSQGKRF+VGDVLVFQYSS
Sbjct: 3   MAKNIRVYALMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYVGDVLVFQYSS 62

Query: 61  SASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVE 120
           S SLNEVTREN+NTCNTTNVLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSF 180
           NNQSFSPAAAP PPPQSD LPRPSSKTDN+GVPS S   +IGGK+AL IVF CYVIS +F
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 182

Query: 181 I 182
           I
Sbjct: 183 I 183

[Close]

BLAST of Clc01G05050 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 57/144 (39.58%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 3   NNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA 62
           N + +C L+ I  + L   AT Y VGDTSGW I  D  TW+  K F VGD LVF Y + A
Sbjct: 5   NALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGA 64

Query: 63  -SLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVEN 122
            +++EV   ++ +C + N +   S+G TT+ L K G+ +F+ G      GGMKL + V+ 
Sbjct: 65  HTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK- 124

Query: 123 NQSFSPAAAPHPPPQSDALPRPSS 146
             S   +AAP   P S     PSS
Sbjct: 125 -ASSGSSAAPSATPSSSGKGSPSS 146

[Close]

BLAST of Clc01G05050 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.8e-16
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 22  ATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS-ASLNEVTRENFNTCNTTNV 81
           AT + +G  SGW +   L TW+ G+ F VGD LVF Y ++   + EVT+  F++C     
Sbjct: 23  ATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAVKP 82

Query: 82  LKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQSFSPAA-APHPPPQSDA 141
           L  +++GN+ V L+ PG+R+F+ G    C  GMKL+VNV    + +P A  P+  P  +A
Sbjct: 83  LITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTATVAPTAPLPNTVPSLNA 142

Query: 142 LPRPSS 146
            P PSS
Sbjct: 143 -PSPSS 147

[Close]

BLAST of Clc01G05050 vs. ExPASy Swiss-Prot
Match: Q02917 (Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-15
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0


Query: 9   VLMVIGGLVLRCNATTYIVGDT-SGWDI----STDLDTWSQGKRFFVGDVLVFQYSS-SA 68
           V++ +  L+    A  Y+VG +   W         L  W+   RF +GD L+F+Y   + 
Sbjct: 13  VMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTE 72

Query: 69  SLNEVTRENFNTCNTTNVLK-AYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQV---- 128
           S++E    ++  CNT       ++ GNT V L+KPG R F+SGN+  C  G+KL V    
Sbjct: 73  SVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVIS 132

Query: 129 -NVENNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIG 163
            N       SP+ +P PPP S   P PS   +N GV S+S    IG
Sbjct: 133 SNKTKKNLLSPSPSPSPPPSSLLSPSPSPLPNNQGVTSSSGAGFIG 178

[Close]

BLAST of Clc01G05050 vs. ExPASy Swiss-Prot
Match: Q8LC95 (Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-14
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 18  LRCNATTYIVGDTSGWDI----STDLDTWSQGKRFFVGDVLVFQYSSSA-SLNEVTRENF 77
           L C+    + G TS W I    S  L+ W++  RF VGD LV++Y     S+ +VT++ +
Sbjct: 20  LVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAY 79

Query: 78  NTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQ-----SFSP 137
             CNTTN    YS+G+T V L + G  FF+SG++  C+ G KL + V +++      F  
Sbjct: 80  INCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSRGGHTGGFFT 139

Query: 138 AAAPHPPPQSDALPRPSSKTDNNGVPSA 156
            ++P P P    L  P+    + G  S+
Sbjct: 140 GSSPSPAPSPALLGAPTVAPASGGSASS 167

[Close]

BLAST of Clc01G05050 vs. ExPASy Swiss-Prot
Match: P00302 (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 23  TTYIVGDTSGWDI----STDLD-TWSQGKRFFVGDVLVFQYSSS-ASLNEVTRENFNTCN 82
           T Y VGD++GW +      D D  W+  K F +GDVLVF+Y     ++++VT++N+ +CN
Sbjct: 1   TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60

Query: 83  TTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNV 120
            T  + +Y++G+  + L   GQ++++ G    C  G K+ +NV
Sbjct: 61  DTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103

[Close]

BLAST of Clc01G05050 vs. ExPASy TrEMBL
Match: A0A6J1I0T8 (stellacyanin OS=Cucurbita maxima OX=3661 GN=LOC111468850 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 151/182 (82.97%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 60
           M NNIWV VL++IGGL L CNA TYIVGDTSGWDISTDLDTWSQGKRF+VGDVLVFQYSS
Sbjct: 3   MANNIWVYVLVIIGGLALSCNAATYIVGDTSGWDISTDLDTWSQGKRFYVGDVLVFQYSS 62

Query: 61  SASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVE 120
           S SLNEVTREN+NTCNTT VLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTKVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSF 180
           NNQSFSPAAAP PPPQSD LPRPSSKTDN+G+PS S   +IGGK+AL IV  CYVIS +F
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGIPSGSTRHVIGGKEALGIVLACYVISLAF 182

Query: 181 IV 183
           I+
Sbjct: 183 II 184

[Close]

BLAST of Clc01G05050 vs. ExPASy TrEMBL
Match: A0A6J1ERB5 (stellacyanin OS=Cucurbita moschata OX=3662 GN=LOC111435827 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.9e-79
Identity = 151/181 (83.43%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MGNNIWVCVLMVIGGLVLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 60
           M  NI V  LM+IGGL L CNA TYIVGDTSGWDISTDLD+WSQGKRF+VGDVLVFQYSS
Sbjct: 3   MAKNIRVYALMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYVGDVLVFQYSS 62

Query: 61  SASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVE 120
           S SLNEVTREN+NTCNTTNVLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVISTSF 180
           NNQSFSPAAAP PPPQSD LPRPSSKTDN+GVPS S   +IGGK+AL IVF CYVIS +F
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 182

Query: 181 I 182
           I
Sbjct: 183 I 183

[Close]

BLAST of Clc01G05050 vs. ExPASy TrEMBL
Match: A0A0A0KPG5 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167140 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.7e-79
Identity = 159/183 (86.89%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 3   NNIWVCVLMVIGGLV-LRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS 62
           NNIWVCVL+VI G   +RCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSS 
Sbjct: 6   NNIWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSL 65

Query: 63  ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVEN 122
           ASLNEVTRENFN+CNTTNVLKAYSSGNTTVTLS+PG RFFVSGNRLLCLGGMKLQVNVEN
Sbjct: 66  ASLNEVTRENFNSCNTTNVLKAYSSGNTTVTLSEPGHRFFVSGNRLLCLGGMKLQVNVEN 125

Query: 123 NQSFSPAAAPHPP-PQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVIST-S 182
           NQSFSPAAAP PP  QSDALPRPSSKTDNN VPSA+A  +IGG + LA +FVCYVIST S
Sbjct: 126 NQSFSPAAAPQPPSSQSDALPRPSSKTDNNSVPSAAAGVVIGGNQGLAFLFVCYVISTLS 185

[Close]

BLAST of Clc01G05050 vs. ExPASy TrEMBL
Match: A0A1S3AT20 (stellacyanin OS=Cucumis melo OX=3656 GN=LOC103482542 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 3   NNIWVCVLMVIGGLV-LRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS 62
           NN WVCVL+VI G   +RCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS
Sbjct: 7   NNTWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS 66

Query: 63  ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVEN 122
           ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVEN
Sbjct: 67  ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVEN 126

Query: 123 NQSFSPAAAPHPPP--QSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVIST- 182
           NQSFSPAAAP PPP   SD LPRPSSKTDNN VP+ +A F++ GK+A AI+FVC VIST 
Sbjct: 127 NQSFSPAAAPQPPPSSHSDDLPRPSSKTDNNSVPNTAAGFVMEGKQARAILFVCCVISTL 186

[Close]

BLAST of Clc01G05050 vs. ExPASy TrEMBL
Match: A0A5A7UGX7 (Stellacyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00080 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 156/184 (84.78%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 3   NNIWVCVLMVIGGLV-LRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS 62
           NN WVCVL+VI G   +RCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS
Sbjct: 7   NNTWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS 66

Query: 63  ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVEN 122
           ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFF SGNRLLCLGGMKLQVNVEN
Sbjct: 67  ASLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFASGNRLLCLGGMKLQVNVEN 126

Query: 123 NQSFSPAAAPHPPP--QSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVFVCYVIST- 182
           NQSFSPAAAP PPP   SD LP+PSSKTDNN VP+ +A F++ GK+A AI+FVC VIST 
Sbjct: 127 NQSFSPAAAPQPPPSSHSDDLPQPSSKTDNNSVPNTAAGFVMEGKQARAILFVCCVISTL 186

[Close]

BLAST of Clc01G05050 vs. TAIR 10
Match: AT5G07475.1 (Cupredoxin superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.4e-39
Identity = 92/182 (50.55%), Postives = 124/182 (68.13%), Query Frame = 0


Query: 10  LMVIGGLVL--RCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSASLNEV 69
           L +I G+V+  RCNATTY VGD+SGWDIS+DL++W+ GKRF  GDVL+FQYSS+ S+ EV
Sbjct: 13  LCIIFGVVVIRRCNATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYSSTHSVYEV 72

Query: 70  TRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQSFSP 129
            ++N+  CNTT+ ++ +++GNTTV LSKPG RFFV GNRL C  GM+L VNVE N    P
Sbjct: 73  AKDNYQNCNTTDAIRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNVEGN---GP 132

Query: 130 AAAPHPPPQ--SDALPRPSSKTDN--NGVPSASADFL--IGGKKALAIVFVCYVISTSFI 184
           + AP   PQ  +  + +PSSK +N   GV S++A F+   G +  + I     V +  FI
Sbjct: 133 SQAPVGSPQAATSGILQPSSKKNNPATGVASSAARFVGDSGWRGTMGIFVYFMVFAFPFI 191

[Close]

BLAST of Clc01G05050 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-17
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 22  ATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSS-ASLNEVTRENFNTCNTTNV 81
           AT + +G  SGW +   L TW+ G+ F VGD LVF Y ++   + EVT+  F++C     
Sbjct: 23  ATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAVKP 82

Query: 82  LKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQSFSPAA-APHPPPQSDA 141
           L  +++GN+ V L+ PG+R+F+ G    C  GMKL+VNV    + +P A  P+  P  +A
Sbjct: 83  LITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTATVAPTAPLPNTVPSLNA 142

Query: 142 LPRPSS 146
            P PSS
Sbjct: 143 -PSPSS 147

[Close]

BLAST of Clc01G05050 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 9.1e-16
Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 17  VLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA-SLNEVTRENFNTC 76
           +L+   T +IVGD++GW++ T+   W+QG+ F VGDVLVF Y S   ++ +V    +  C
Sbjct: 1   MLKSEGTEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDC 60

Query: 77  NTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNV 120
              N    ++ GN ++ LS+ G+ +F+ G    C+ G KL +NV
Sbjct: 61  GLDNYTTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104

[Close]

BLAST of Clc01G05050 vs. TAIR 10
Match: AT3G27200.1 (Cupredoxin superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 7   VCVLMVIGGL--VLRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSASL 66
           V V++V  GL  V    A  +++G + GW+ S D D+WS  + F VGD +VF+YS   S+
Sbjct: 6   VLVILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELHSV 65

Query: 67  NEVTREN-FNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQ 126
            E+  E  + +C+    + + SSGN  V LSK G R+F  G    C  GMK++VNV ++ 
Sbjct: 66  VELGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVNVVSSD 125

Query: 127 SFSPAAAPHPPPQSDALPRPSSKTDNNGVPSASADFLIGGKKALAIVF 172
           S S A++P            S  +  +G+ +++    + G   + +++
Sbjct: 126 SKS-ASSPSGSGSGSDSGSGSGSSSGHGLRASTGYMFVVGSLVIGLIW 172

[Close]

BLAST of Clc01G05050 vs. TAIR 10
Match: AT5G25090.1 (early nodulin-like protein 13 )

HSP 1 Score: 78.6 bits (192), Expect = 5.9e-15
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 18  LRCNATTYIVGDTSGWDI----STDLDTWSQGKRFFVGDVLVFQYSSSA-SLNEVTRENF 77
           L C+    + G TS W I    S  L+ W++  RF VGD LV++Y     S+ +VT++ +
Sbjct: 20  LVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAY 79

Query: 78  NTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQ-----SFSP 137
             CNTTN    YS+G+T V L + G  FF+SG++  C+ G KL + V +++      F  
Sbjct: 80  INCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSRGGHTGGFFT 139

Query: 138 AAAPHPPPQSDALPRPSSKTDNNGVPSA 156
            ++P P P    L  P+    + G  S+
Sbjct: 140 GSSPSPAPSPALLGAPTVAPASGGSASS 167

The following BLAST results are available for this feature:

BLAST of Clc01G05050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877141.1	3.2e-87	92.27	stellacyanin-like [Benincasa hispida]	[more]
XP_023549499.1	3.8e-80	83.98	stellacyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969745.1	4.9e-80	82.97	stellacyanin [Cucurbita maxima]	[more]
KAG6579635.1	1.2e-78	83.43	Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022929168.1	1.2e-78	83.43	stellacyanin [Cucurbita moschata]	[more]

BLAST of Clc01G05050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41001	1.1e-18	39.58	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
O82081	6.8e-16	39.68	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
Q02917	3.4e-15	34.34	Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1	[more]
Q8LC95	8.3e-14	33.78	Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 S...	[more]
P00302	2.1e-12	34.95	Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1	[more]

BLAST of Clc01G05050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0T8	2.4e-80	82.97	stellacyanin OS=Cucurbita maxima OX=3661 GN=LOC111468850 PE=4 SV=1	[more]
A0A6J1ERB5	5.9e-79	83.43	stellacyanin OS=Cucurbita moschata OX=3662 GN=LOC111435827 PE=4 SV=1	[more]
A0A0A0KPG5	7.7e-79	86.89	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167140...	[more]
A0A1S3AT20	3.8e-78	85.87	stellacyanin OS=Cucumis melo OX=3656 GN=LOC103482542 PE=4 SV=1	[more]
A0A5A7UGX7	3.2e-77	84.78	Stellacyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00080 P...	[more]

BLAST of Clc01G05050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07475.1	3.4e-39	50.55	Cupredoxin superfamily protein	[more]
AT2G32300.1	4.8e-17	39.68	uclacyanin 1	[more]
AT3G17675.1	9.1e-16	36.54	Cupredoxin superfamily protein	[more]
AT3G27200.1	1.2e-15	31.55	Cupredoxin superfamily protein	[more]
AT5G25090.1	5.9e-15	33.78	early nodulin-like protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 21..126 e-value: 1.6E-30 score: 107.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 22..119
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 34..113 e-value: 2.5E-20 score: 72.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 23..121 score: 35.492561
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..151
None	No IPR available	PANTHER	PTHR33021:SF70	OSJNBA0079A21.6 PROTEIN	coord: 8..176
None	No IPR available	CDD	cd04216	Phytocyanin	coord: 23..119 e-value: 1.90296E-40 score: 130.458
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 8..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G05050.1	Clc01G05050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity