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Clc01G04740 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCATTCTTTTTTCTCCTCTATTTCTCTCTTTCTTCTTCCCTTTCCCTCTCCCATACTACAGCCTTTCTTTCTCCTTACTCCTCAAGAAAACATGGTATGTTGTTTCTCTCTATCTTTTCTATAATTTGTTTAATCATTACAAAACAATTTAGTCTCGGACCACTCTATTTCATAACCATTTCGATTACTTTTTAGTTTTACACTTTGAAACATCATGTGTTGTAGTTTCTTCACAATTTGTTATGATTGTCAAATGTCTTATCTTCTATATTTCATTTATGTAGTTTAATAATTAATAATTATCCAAAAATGTTATATTACTGTTGATTATAGGCGAACTCAGCATCTGGAATGGCTGTGAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAACTACAGATTCATCATTTTCAAGATTGAACAACAAGAAGTGGTGGTAGAGAAATTGGGAAAACCAGATGAAACATATGAGGATTTCACTGGATCTCTCCCTGCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCATTACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTACGCTACTCACTCTATCAATCCAATCCGAGCATAGCTCACTAATATAAGGCATCAAAATTACCAGTTCATAAAGGTTGATGGTTCGATCCCTTACACCCCACAACATTTGAGTTAAAAAACAATTTGGGAAATGGAGGATTTGAACCAACTCTAACTTTTTGGTCGAGGGTATAAGCCTAAACTAGGTTACAGATTGACCACAAATCGTTTAACCTAGAAATTGATTAACAATGCATTTGAATCTTGTTCGATAATTGTTTTTTACTCATTTTAGACACTGCCATTGTGAGTATAACTTAGTAGACACAAGACATCAAAATTACCACTATAAGGGTCATCAATGGTTCGATTCTTTATCCCCTATAACATTTGAGTTCAATAATAATTTGGAGTAGGGAGAATCAAACCAACTTTGACAATTTTTTCTTGAGGGTATATGCCTAAATTAGTTGAGTTATGCTCAAGTTGGCTACAAACCATTTAACCTAAAAAATCGATTAACCATATTCACCAATATAAGTGAATTTGAATCTTTTCTGATAGTTGTTTCTTACTCATTGTCAATCTAAGCATAGCTTTGGTTTGATCCTCCACACCCCCGCAACATTTAAGTTCAACAACAAATTGGAGTAGGGAGAGTTTAACGTAGAAATCGATTAGTTGTATATTGAGTAACATATGTGCATTCAAAATATTTTTGGATAGTTGTTTTTGTTAGTGGTTTTATTTTGATAACATCTTTATCTAAATGATGGTATGTTGAGAAATAGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAACTAGATGGAATTCAATTTGAGTTGCAAGCAACAGATCCAAGTGAGATGAGCTTTGACATTGTCAAGGCACGTGCATTCTAGATGCCACAAAAATAAACACAAAATCCTATCCCCTTCTTTGTTTTTGCTCTAAATTAATGTGTTTTGTTCCTCTATATCTCAACAAAACTACACATTTTATAGAGAAGCTTTTGTAATTTTTTTTTAATATCTAT TCTCCATTCTTTTTTCTCCTCTATTTCTCTCTTTCTTCTTCCCTTTCCCTCTCCCATACTACAGCCTTTCTTTCTCCTTACTCCTCAAGAAAACATGGCGAACTCAGCATCTGGAATGGCTGTGAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAACTACAGATTCATCATTTTCAAGATTGAACAACAAGAAGTGGTGGTAGAGAAATTGGGAAAACCAGATGAAACATATGAGGATTTCACTGGATCTCTCCCTGCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCATTACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAACTAGATGGAATTCAATTTGAGTTGCAAGCAACAGATCCAAGTGAGATGAGCTTTGACATTGTCAAGGCACGTGCATTCTAGATGCCACAAAAATAAACACAAAATCCTATCCCCTTCTTTGTTTTTGCTCTAAATTAATGTGTTTTGTTCCTCTATATCTCAACAAAACTACACATTTTATAGAGAAGCTTTTGTAATTTTTTTTTAATATCTAT ATGGCGAACTCAGCATCTGGAATGGCTGTGAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAACTACAGATTCATCATTTTCAAGATTGAACAACAAGAAGTGGTGGTAGAGAAATTGGGAAAACCAGATGAAACATATGAGGATTTCACTGGATCTCTCCCTGCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCATTACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAACTAGATGGAATTCAATTTGAGTTGCAAGCAACAGATCCAAGTGAGATGAGCTTTGACATTGTCAAGGCACGTGCATTCTAG MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF Homology
BLAST of Clc01G04740 vs. NCBI nr
Match: XP_008437023.1 (PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depolymerizing factor 7 [Cucumis melo var. makuwa]) HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Clc01G04740 vs. NCBI nr
Match: XP_004152385.2 (actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein Csa_000362 [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Clc01G04740 vs. NCBI nr
Match: XP_022995817.1 (actin-depolymerizing factor 7 [Cucurbita maxima] >XP_023534281.1 actin-depolymerizing factor 7 [Cucurbita pepo subsp. pepo] >KAG6605728.1 Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67 Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Clc01G04740 vs. NCBI nr
Match: XP_022958404.1 (actin-depolymerizing factor 7 [Cucurbita moschata]) HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67 Identity = 130/137 (94.89%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Clc01G04740 vs. NCBI nr
Match: XP_022159651.1 (actin-depolymerizing factor 7 [Momordica charantia]) HSP 1 Score: 265.0 bits (676), Expect = 3.6e-67 Identity = 131/137 (95.62%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 3.0e-64 Identity = 119/136 (87.50%), Postives = 129/136 (94.85%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 7.5e-60 Identity = 111/139 (79.86%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy Swiss-Prot
Match: Q6EUH7 (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.9e-59 Identity = 111/138 (80.43%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2) HSP 1 Score: 229.2 bits (583), Expect = 2.9e-59 Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 6.4e-59 Identity = 110/137 (80.29%), Postives = 124/137 (90.51%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy TrEMBL
Match: A0A5A7TKY7 (Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00280 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 8.3e-70 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy TrEMBL
Match: A0A1S3ATL2 (actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 8.3e-70 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy TrEMBL
Match: A0A0A0KKY8 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy TrEMBL
Match: A0A6J1K020 (actin-depolymerizing factor 7 OS=Cucurbita maxima OX=3661 GN=LOC111491240 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68 Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Clc01G04740 vs. ExPASy TrEMBL
Match: A0A6J1H503 (actin-depolymerizing factor 7 OS=Cucurbita moschata OX=3662 GN=LOC111459638 PE=3 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 130/137 (94.89%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Clc01G04740 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 ) HSP 1 Score: 245.7 bits (626), Expect = 2.1e-65 Identity = 119/136 (87.50%), Postives = 129/136 (94.85%), Query Frame = 0
BLAST of Clc01G04740 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 ) HSP 1 Score: 228.0 bits (580), Expect = 4.5e-60 Identity = 110/137 (80.29%), Postives = 124/137 (90.51%), Query Frame = 0
BLAST of Clc01G04740 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 ) HSP 1 Score: 226.1 bits (575), Expect = 1.7e-59 Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0
BLAST of Clc01G04740 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 ) HSP 1 Score: 223.4 bits (568), Expect = 1.1e-58 Identity = 106/137 (77.37%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of Clc01G04740 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 ) HSP 1 Score: 219.5 bits (558), Expect = 1.6e-57 Identity = 103/137 (75.18%), Postives = 124/137 (90.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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