Clc01G04240 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G04240
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	L-lactate dehydrogenase
Location	ClcChr01: 4078065 .. 4080191 (-)
RNA-Seq Expression	Clc01G04240
Synteny	Clc01G04240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCCCTTTAACGCAACCCTCCATTTAAAATCCGCAAAGGCTCCACCGCCAATCACAATCTCCAAACCTTTTTCACAATGCAGAAAAGTACATCAACATCTTCCTTAGGTCCAGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCCATCCACCTCAAAACGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTCGGCATGGCCATTGCTCAAACCATCCTCACTCAAGATCTGGTTGATGAACTCATCCTCGTCGACGCCAAGCCCGACAAACTCCGCGGCGAAATGCTCGATCTCCAACACGCTGCCGCCTTCCTTCCCCGCACCAAAATCAGCGCTTCCACAGATTACTCCGTTACCGCTGGATCCGATCTATGTATTGTCACCGCTGGTGCTCGCCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTCGCTCTGTTTCAGAAGATCGTGCCGCCGCTGGTTCAGTTCTCTCCCGACACGATTCTTCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTCCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCCGATCATCTCGACGTCAATGCTCAGGATGTTCAGGTCAGTTTTCCGATTGACATTTCTTCTACCTTCTTTAATGGATCATTGCTTATTTGTTAATTTTGGTGTTGTTTGTTGAAGAAATTTCCTTTTCGATTTAATTGTTTTTGGTTGATTGGTATCAAATGTGCTGATCATTTTTGGGAAAATTTGAGGAAAAGGAACAGGCCAAATAACTATTCCACACAAAATTGACAATTTATTAGATTCCAAATTGAAAGTTGCACTAGATCATGAATTTATTAGGAAAAATTAAAAAGTTTAGGGACTTTATCAACCTAAACTAAAACAGTTTGAACATTGAAGTTCTAATTGAACTAAAAAGTTGAGGTTAAATTTGGTAAAGGTTAGAATTTAGTTATAATTAAAATTTTGTACCTATCATTTATAAAATTCTAGTATTTATACATTTAGGACTATTCATGAGGTTTTATTAAACTACAAAAGACAAAATTCTAACTATAAAAAGTAGTAGGAGCTAACTTTTAGAATTATTGGGACTATATTCTAACCTTTTTCTAACTATAAGGGACCAAATTTGTAATTTGATACTTTTAAAATGTTCATTTTGAGTTTTATACTTTCAACTTTAATTCATTTTGGTCATTGAAAATGAGGTAAAAATGTAAATGGACCAAAATGGTCACTTATGAAAGTATAAGGACAAAAATAAACATTTTGAAAGTATATGGACGGAAATGAACCAAAAGTTAAAAGTATCGGGACAAAAATAATTATTTTGTAAATATAAGGATTAAAATGAACTAAAAAAACCAAAATAGACATTTTGAAAATTCAGTTACCAAAATGAAAAAGTAAATTCCAAGTTCACCCAAGTGTAACTCAATCCATCATTTAGGTGCTGAAATTATACATCAAACCATAGATGAATTTGTAGAAACTAGCATTGATATCTAAATCATGAAGCTAAAAAACAGAGAATTATATATATGTTTTGAAGGCCTACATAGTGGGAGAGCATGGCGACAGTTCTGTGGCGTTATGGTCAAGCATAAGCGTGGGCGGGGTGCCAATACTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGCGGGGCTTACGAAGTCATAAGCCTGAAGGGCTACACATCATGGGCGATCGGGTACTCTGTGGCGAGCTTGGCTCGGTCGCTCATTCGGGACCAACGGAGGATCCACCCTGTTTCCGTCTTTGCAAAAGGGTTTTATGGCATTGACGGGGGCGACTTGTTCCTTAGTTTGCCCGCGCAGCTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAGAAGAGGAGTCGAGACGATTGAGAGACTCGGCAAACACCATCTTGCAAGTGCAGACTGAGTTGGGAATCTAA

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCCCTTTAACGCAACCCTCCATTTAAAATCCGCAAAGGCTCCACCGCCAATCACAATCTCCAAACCTTTTTCACAATGCAGAAAAGTACATCAACATCTTCCTTAGGTCCAGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCCATCCACCTCAAAACGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTCGGCATGGCCATTGCTCAAACCATCCTCACTCAAGATCTGGTTGATGAACTCATCCTCGTCGACGCCAAGCCCGACAAACTCCGCGGCGAAATGCTCGATCTCCAACACGCTGCCGCCTTCCTTCCCCGCACCAAAATCAGCGCTTCCACAGATTACTCCGTTACCGCTGGATCCGATCTATGTATTGTCACCGCTGGTGCTCGCCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTCGCTCTGTTTCAGAAGATCGTGCCGCCGCTGGTTCAGTTCTCTCCCGACACGATTCTTCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTCCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCCGATCATCTCGACGTCAATGCTCAGGATGTTCAGGGACCAAATTTTTACCAAAATGAAAAAGTAAATTCCAAGTTCACCCAAAATTATATATATGTTTTGAAGGCCTACATAGTGGGAGAGCATGGCGACAGTTCTGTGGCGTTATGGTCAAGCATAAGCGTGGGCGGGGTGCCAATACTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGCGGGGCTTACGAAGTCATAAGCCTGAAGGGCTACACATCATGGGCGATCGGGTACTCTGTGGCGAGCTTGGCTCGGTCGCTCATTCGGGACCAACGGAGGATCCACCCTGTTTCCGTCTTTGCAAAAGGGTTTTATGGCATTGACGGGGGCGACTTGTTCCTTAGTTTGCCCGCGCAGCTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAGAAGAGGAGTCGAGACGATTGAGAGACTCGGCAAACACCATCTTGCAAGTGCAGACTGAGTTGGGAATCTAA

Coding sequence (CDS)

ATGCAGAAAAGTACATCAACATCTTCCTTAGGTCCAGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCCATCCACCTCAAAACGCAACACCAAAATCTCCGTCATCGGCGCCGGAAACGTCGGCATGGCCATTGCTCAAACCATCCTCACTCAAGATCTGGTTGATGAACTCATCCTCGTCGACGCCAAGCCCGACAAACTCCGCGGCGAAATGCTCGATCTCCAACACGCTGCCGCCTTCCTTCCCCGCACCAAAATCAGCGCTTCCACAGATTACTCCGTTACCGCTGGATCCGATCTATGTATTGTCACCGCTGGTGCTCGCCAGATCGCCGGTGAATCTAGGTTGAATCTGTTGCAGAGGAATGTCGCTCTGTTTCAGAAGATCGTGCCGCCGCTGGTTCAGTTCTCTCCCGACACGATTCTTCTGATCGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAGCTCTCTGGTTTCCCGTCGAATCGAGTGATTGGATCGGGAACGAATCTGGATTCGTCTAGGTTTCGGTTTCTCATCGCCGATCATCTCGACGTCAATGCTCAGGATGTTCAGGGACCAAATTTTTACCAAAATGAAAAAGTAAATTCCAAGTTCACCCAAAATTATATATATGTTTTGAAGGCCTACATAGTGGGAGAGCATGGCGACAGTTCTGTGGCGTTATGGTCAAGCATAAGCGTGGGCGGGGTGCCAATACTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGCGGGGCTTACGAAGTCATAAGCCTGAAGGGCTACACATCATGGGCGATCGGGTACTCTGTGGCGAGCTTGGCTCGGTCGCTCATTCGGGACCAACGGAGGATCCACCCTGTTTCCGTCTTTGCAAAAGGGTTTTATGGCATTGACGGGGGCGACTTGTTCCTTAGTTTGCCCGCGCAGCTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAGAAGAGGAGTCGAGACGATTGAGAGACTCGGCAAACACCATCTTGCAAGTGCAGACTGAGTTGGGAATCTAA

Protein sequence

MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTELGI

Homology

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BLAST of Clc01G04240 vs. NCBI nr
Match: XP_038906687.1 (L-lactate dehydrogenase A [Benincasa hispida])

HSP 1 Score: 652.1 bits (1681), Expect = 2.8e-183
Identity = 341/373 (91.42%), Postives = 347/373 (93.03%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS+STSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSSSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGTGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGSDLCI+TAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIITAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RSL+RDQRRIHPVSV AKG YGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS
Sbjct: 301 RSLLRDQRRIHPVSVLAKGLYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQTELGI
Sbjct: 361 ANTILQVQTELGI 350

[Close]

BLAST of Clc01G04240 vs. NCBI nr
Match: XP_008437100.2 (PREDICTED: L-lactate dehydrogenase A [Cucumis melo])

HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181
Identity = 338/373 (90.62%), Postives = 345/373 (92.49%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS STSSLGPGGLDLSQAFFKPIRDASPPSTS RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGS+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RS++RDQRRIHPVSV AKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDS
Sbjct: 301 RSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQTELGI
Sbjct: 361 ANTILQVQTELGI 350

[Close]

BLAST of Clc01G04240 vs. NCBI nr
Match: XP_004151663.3 (L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 643.7 bits (1659), Expect = 1.0e-180
Identity = 335/373 (89.81%), Postives = 345/373 (92.49%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS+S SSLGPGGLDLSQAFFKPIRDASPPST+ RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGSDLCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQI YEKETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIGYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RS++RDQRRIHPVSV AKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDS
Sbjct: 301 RSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQTELGI
Sbjct: 361 ANTILQVQTELGI 350

[Close]

BLAST of Clc01G04240 vs. NCBI nr
Match: KAA0039708.1 (L-lactate dehydrogenase A [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.9e-180
Identity = 336/373 (90.08%), Postives = 344/373 (92.23%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLSQAFFKPIRDASPPS S RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLSQAFFKPIRDASPPSISNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGS+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RS++RDQRRIHPVSV AKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDS
Sbjct: 301 RSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQTELGI
Sbjct: 361 ANTILQVQTELGI 350

[Close]

BLAST of Clc01G04240 vs. NCBI nr
Match: KAE8647895.1 (hypothetical protein Csa_000230 [Cucumis sativus])

HSP 1 Score: 638.3 bits (1645), Expect = 4.2e-179
Identity = 332/373 (89.01%), Postives = 344/373 (92.23%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS+S SSLGPGGLDLSQAFFKPIRDASPPST+ RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGSDLCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTY+AWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       A+IVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AFIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RS++RDQRRIHPVSV AKGFYGI+GGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDS
Sbjct: 301 RSILRDQRRIHPVSVIAKGFYGIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTIL VQ ELGI
Sbjct: 361 ANTILHVQAELGI 350

[Close]

BLAST of Clc01G04240 vs. ExPASy Swiss-Prot
Match: P22988 (L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 5.7e-126
Identity = 243/371 (65.50%), Postives = 287/371 (77.36%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASP--PSTS----KRNTKISVIGAGNVGMAIAQ 60
           M K++S S LG      S  FF+P+ D  P  P++S    +R TKISVIGAGNVGMAIAQ
Sbjct: 1   MHKASSLSELGFDAGGASSGFFRPVADGCPATPTSSAVPHRRLTKISVIGAGNVGMAIAQ 60

Query: 61  TILTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAG 120
           TILTQ+L DE+ LVDA PDKLRGE LDLQHAAAFLPR +IS  TD +VT  SDL IVTAG
Sbjct: 61  TILTQNLADEIALVDALPDKLRGEALDLQHAAAFLPRVRIS-GTDAAVTKNSDLVIVTAG 120

Query: 121 ARQIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNR 180
           ARQI GE+RLNLLQRNVAL++KIVPP+ + SPD +LL+VSNPVDVLTYVAWKLSGFP++R
Sbjct: 121 ARQIPGETRLNLLQRNVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 180

Query: 181 VIGSGTNLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHG 240
           VIGSGTNLDSSRFRFLIA+HLDVNAQDVQ                       AY+VGEHG
Sbjct: 181 VIGSGTNLDSSRFRFLIAEHLDVNAQDVQ-----------------------AYMVGEHG 240

Query: 241 DSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGY 300
           DSSVA+WSSISVGG+P    L++   ++++  LE I + V+GGAYEVI LKGYTSWAIGY
Sbjct: 241 DSSVAIWSSISVGGMPAFKSLRDSHRSFDEAALEGIRRAVVGGAYEVIGLKGYTSWAIGY 300

Query: 301 SVASLARSLIRDQRRIHPVSVFAKGFYGI-DGGDLFLSLPAQLGRGGVLGITNVHLTEEE 360
           SVASLA SL+RDQRR+HPVSV A GF+GI DG ++FLSLPA+LGRGG+LG+  + LTE E
Sbjct: 301 SVASLAASLLRDQRRVHPVSVLASGFHGISDGHEVFLSLPARLGRGGILGVAEMDLTEAE 347

Query: 361 SRRLRDSANTI 365
           + +LR SA T+
Sbjct: 361 AAQLRRSAKTL 347

[Close]

BLAST of Clc01G04240 vs. ExPASy Swiss-Prot
Match: P22989 (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 4.5e-123
Identity = 233/365 (63.84%), Postives = 280/365 (76.71%), Query Frame = 0


Query: 16  DLSQAFFKPIRDASP------PSTSKRNTKISVIGAGNVGMAIAQTILTQDLVDELILVD 75
           D S  FF+ + D  P       +  +R TK+SVIGAGNVGMAIAQTILTQ+L DE+ LVD
Sbjct: 3   DASSGFFRAVADGCPITHTSCSAPHRRLTKVSVIGAGNVGMAIAQTILTQNLADEIALVD 62

Query: 76  AKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAGESRLNLLQR 135
           A PDKLRGE LDLQHAAAFLPR +I + TD +VT  SDL +VTAGARQI GE+RLNLLQR
Sbjct: 63  ALPDKLRGEALDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQR 122

Query: 136 NVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRF 195
           NVAL++KIVPP+ + SPD +LL+VSNPVDVLTYVAWKLSGFP++RVIGSGTNLDSSRFRF
Sbjct: 123 NVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRF 182

Query: 196 LIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVALWSSISVGGV 255
           L+A+HLDV+AQDVQ                       AY+VGEHGDSSVA+WSSISVGG+
Sbjct: 183 LVAEHLDVSAQDVQ-----------------------AYMVGEHGDSSVAIWSSISVGGM 242

Query: 256 PILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRR 315
           P L  L++   ++++  LE I + V+GGAYEVI LKGYTSWAIGYSVASLA SL+RDQRR
Sbjct: 243 PALKSLRDSHRSFDEAALEGIRRAVVGGAYEVIGLKGYTSWAIGYSVASLATSLLRDQRR 302

Query: 316 IHPVSVFAKGFYGI-DGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQ 374
           +HPVSV A GF+GI DG ++FLSLPA+LGR GVLG+  + LTE E+ +LR SA T+ +  
Sbjct: 303 VHPVSVLAAGFHGISDGHEVFLSLPARLGRAGVLGVAEMDLTEAEAAQLRRSAKTLWENC 344

[Close]

BLAST of Clc01G04240 vs. ExPASy Swiss-Prot
Match: P29038 (L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-119
Identity = 239/378 (63.23%), Postives = 284/378 (75.13%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIR-DASPPSTS---KRNTKISVIGAGNVGMAIAQTI 60
           M+K+TS S LG    D S  FF+P+  D+S P++    +R TK+SVIGAGNVGMAIAQTI
Sbjct: 1   MKKATSLSELGFDAGDASSGFFRPVSGDSSTPTSQHHRRRLTKVSVIGAGNVGMAIAQTI 60

Query: 61  LTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGAR 120
           LT+DL DE+ LVDA PDKLRGEMLDLQHAAAFLPRT++ + TD SVT GSDL IVTAGAR
Sbjct: 61  LTRDLADEIALVDAVPDKLRGEMLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGAR 120

Query: 121 QIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVI 180
           QI GE+RL+LLQRNVALF+KIVPPL + S D +LL+VSNPVDVLTYVAWKLSGFP++RVI
Sbjct: 121 QIQGETRLDLLQRNVALFRKIVPPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASRVI 180

Query: 181 GSGTNLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDS 240
           GSGTNLDSSRFRFL+A+HLDVNAQDVQ                       AY+VGEHGDS
Sbjct: 181 GSGTNLDSSRFRFLLAEHLDVNAQDVQ-----------------------AYMVGEHGDS 240

Query: 241 SVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSV 300
           SVA+WSS+SV G+P+L  L+     +++E LE I + V+  AYEVISLKGYTSWAIGYSV
Sbjct: 241 SVAVWSSVSVAGMPVLKSLQESHRCFDEEALEGIRRAVVDSAYEVISLKGYTSWAIGYSV 300

Query: 301 ASLARSLIRDQRRIHPVSVFAKGFYGI-DGGDLFLSLPAQLGRGGVLGITNVHLTEEESR 360
           ASLA SL+RDQRRIHPVSV A+GF+GI DG     + P +  R    G   + LTEEE++
Sbjct: 301 ASLAASLLRDQRRIHPVSVLARGFHGIPDGTTSSSACPPRRPRRRP-GRREMELTEEEAK 354

Query: 361 RLRDSANTILQVQTELGI 374
           RLR SA TI +    LG+
Sbjct: 361 RLRRSAKTIWENCQLLGL 354

[Close]

BLAST of Clc01G04240 vs. ExPASy Swiss-Prot
Match: P06151 (L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3)

HSP 1 Score: 334.0 bits (855), Expect = 2.2e-90
Identity = 176/333 (52.85%), Postives = 228/333 (68.47%), Query Frame = 0


Query: 39  KISVIGAGNVGMAIAQTILTQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISAST 98
           KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GEM+DLQH + FL   KI +S 
Sbjct: 22  KITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQHGSLFLKTPKIVSSK 81

Query: 99  DYSVTAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVD 158
           DY VTA S L I+TAGARQ  GESRLNL+QRNV +F+ I+P +V++SP   LLIVSNPVD
Sbjct: 82  DYCVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPHCKLLIVSNPVD 141

Query: 159 VLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFT 218
           +LTYVAWK+SGFP NRVIGSG NLDS+RFR+L+ + L V+A    G              
Sbjct: 142 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHG-------------- 201

Query: 219 QNYIYVLKAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGA 278
                    +++GEHGDSSV +WS ++V GV + S         +KE  +++HK+V+  A
Sbjct: 202 ---------WVLGEHGDSSVPVWSGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVDSA 261

Query: 279 YEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGR 338
           YEVI LKGYTSWAIG SVA LA S++++ RR+HP+S   KG YGI+  D+FLS+P  LG+
Sbjct: 262 YEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIN-EDVFLSVPCILGQ 321

Query: 339 GGVLGITNVHLTEEESRRLRDSANTILQVQTEL 372
            G+  +  V LT EE  RL+ SA+T+  +Q EL
Sbjct: 322 NGISDVVKVTLTPEEEARLKKSADTLWGIQKEL 330

[Close]

BLAST of Clc01G04240 vs. ExPASy Swiss-Prot
Match: Q9W7M6 (L-lactate dehydrogenase A chain OS=Ambystoma mexicanum OX=8296 GN=LDHA PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 8.5e-90
Identity = 178/353 (50.42%), Postives = 233/353 (66.01%), Query Frame = 0


Query: 19  QAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQDLVDELILVDAKPDKLRGE 78
           Q     ++D   P+      KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GE
Sbjct: 7   QLIINILKDEHAPA----QNKITVVGVGAVGMACAMSILMKDLADELALVDVIEDKLKGE 66

Query: 79  MLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAGESRLNLLQRNVALFQKIV 138
           M+DLQH + FL   KI +  DYSVTA S L IVTAGARQ  GESRLNL+QRNV +F+ I+
Sbjct: 67  MMDLQHGSLFLRTPKIVSGKDYSVTANSKLVIVTAGARQQEGESRLNLVQRNVNIFKFII 126

Query: 139 PPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVN 198
           P +V++SPD  LL+VSNPVDVLTYVAWK+SGFP +RVIGSG NLDS+RFR+L+ + L V+
Sbjct: 127 PNVVKYSPDATLLVVSNPVDVLTYVAWKISGFPKHRVIGSGCNLDSARFRYLMGEKLGVH 186

Query: 199 AQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVALWSSISVGGVPILSFLKNQ 258
           AQ   G                       ++VGEHGDSSV +WS ++V GV + +     
Sbjct: 187 AQSCHG-----------------------WVVGEHGDSSVPVWSGVNVAGVSLQTLNPEL 246

Query: 259 QIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLARSLIRDQRRIHPVSVFAK 318
               +KE  +++HK+V+  AYEVI LKGYTSWAIG SVA LA +++++ RR+HPVS   K
Sbjct: 247 GTDADKENWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAETIMKNLRRVHPVSTKVK 306

Query: 319 GFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDSANTILQVQTEL 372
           G YG+   D+FLS+P  LG  G+  +  + L  EE  RLR S++T+  +Q EL
Sbjct: 307 GLYGVH-EDVFLSVPCVLGNQGITDVVKMTLKPEEEDRLRKSSDTLWGIQKEL 331

[Close]

BLAST of Clc01G04240 vs. ExPASy TrEMBL
Match: A0A1S3ATB9 (L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181
Identity = 338/373 (90.62%), Postives = 345/373 (92.49%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS STSSLGPGGLDLSQAFFKPIRDASPPSTS RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TAGS+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RS++RDQRRIHPVSV AKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDS
Sbjct: 301 RSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQTELGI
Sbjct: 361 ANTILQVQTELGI 350

[Close]

BLAST of Clc01G04240 vs. ExPASy TrEMBL
Match: A0A5A7T9X6 (L-lactate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00390 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 336/373 (90.08%), Postives = 344/373 (92.23%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S SSLGPGGLDLSQAFFKPIRDASPPS S RNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASSLGPGGLDLSQAFFKPIRDASPPSISNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LVDEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGS+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSNLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQFSP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RS++RDQRRIHPVSV AKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLT EES+RLRDS
Sbjct: 301 RSILRDQRRIHPVSVLAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQTELGI
Sbjct: 361 ANTILQVQTELGI 350

[Close]

BLAST of Clc01G04240 vs. ExPASy TrEMBL
Match: A0A6J1E3A1 (L-lactate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111430410 PE=3 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 7.3e-177
Identity = 328/373 (87.94%), Postives = 342/373 (91.69%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           M+KS+S SSLGPGGLD+SQAFFKP+ DASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MEKSSSASSLGPGGLDISQAFFKPVSDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTA SDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAESDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SP+TILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFL+NQQI YEKETLE IHKEVIGGAYEVI+LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLQNQQITYEKETLESIHKEVIGGAYEVINLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RSL+RDQRRIHPVSV AKGFYGI+GG+LFLSLPAQLGRGGVLGITNVHLT+EES RLRDS
Sbjct: 301 RSLLRDQRRIHPVSVLAKGFYGINGGELFLSLPAQLGRGGVLGITNVHLTDEESGRLRDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQT+LGI
Sbjct: 361 ANTILQVQTQLGI 350

[Close]

BLAST of Clc01G04240 vs. ExPASy TrEMBL
Match: A0A6J1H2Z1 (L-lactate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111459629 PE=3 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 2.1e-176
Identity = 329/373 (88.20%), Postives = 339/373 (90.88%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS S S+LGPGGLDLSQAFFKPI DASPPSTSK NTKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASALGPGGLDLSQAFFKPIPDASPPSTSKGNTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           L DEL+LVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS+TAGSDLCIVT GARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTVGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIVPPLVQ+SPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLK+QQIAYEKETLE IHKEVIGGAYEVI LKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKSQQIAYEKETLENIHKEVIGGAYEVIRLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RSL+RDQ+RIHPVSV AKGFYGIDGGDLFLSLPA+LGRGGVLGITNVHLT EE RRL+DS
Sbjct: 301 RSLLRDQQRIHPVSVLAKGFYGIDGGDLFLSLPARLGRGGVLGITNVHLTTEEMRRLQDS 350

Query: 361 ANTILQVQTELGI 374
           ANTILQVQ+ELGI
Sbjct: 361 ANTILQVQSELGI 350

[Close]

BLAST of Clc01G04240 vs. ExPASy TrEMBL
Match: A0A6J1DPR5 (L-lactate dehydrogenase OS=Momordica charantia OX=3673 GN=LOC111021951 PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.6e-176
Identity = 328/373 (87.94%), Postives = 342/373 (91.69%), Query Frame = 0


Query: 1   MQKSTSTSSLGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTILTQD 60
           MQKS+S S LGPGGLD+SQAFFKPIRDA+PPS  KR+TKISVIGAGNVGMAIAQTILTQD
Sbjct: 1   MQKSSSESLLGPGGLDISQAFFKPIRDAAPPSALKRHTKISVIGAGNVGMAIAQTILTQD 60

Query: 61  LVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQIAG 120
           LV+EL+LVDAKPDKLRGEMLDLQHAAAFLPRTKI+ASTDYSVTAGSDLCIVTAGARQIAG
Sbjct: 61  LVEELVLVDAKPDKLRGEMLDLQHAAAFLPRTKINASTDYSVTAGSDLCIVTAGARQIAG 120

Query: 121 ESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180
           ESRLNLLQRNVALFQKIV PLVQ+SPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVXPLVQYSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 181 NLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSSVAL 240
           NLDSSRFRFLIADHLDVNAQDVQ                       AYIVGEHGDSSVAL
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQ-----------------------AYIVGEHGDSSVAL 240

Query: 241 WSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300
           WSSISVGGVPILSFLKNQQIAYEKETLE IHKEVIGGAYEVISLKGYTSWAIGYSVASLA
Sbjct: 241 WSSISVGGVPILSFLKNQQIAYEKETLENIHKEVIGGAYEVISLKGYTSWAIGYSVASLA 300

Query: 301 RSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRLRDS 360
           RSLIRDQRRIHPVSV AKGFYGIDGG+LFLSLPAQLGRGGVLGITNVHLTE+E RRLR+S
Sbjct: 301 RSLIRDQRRIHPVSVLAKGFYGIDGGELFLSLPAQLGRGGVLGITNVHLTEDECRRLRES 350

Query: 361 ANTILQVQTELGI 374
           ANTIL+VQ++LGI
Sbjct: 361 ANTILEVQSQLGI 350

[Close]

BLAST of Clc01G04240 vs. TAIR 10
Match: AT4G17260.1 (Lactate/malate dehydrogenase family protein )

HSP 1 Score: 540.0 bits (1390), Expect = 1.5e-153
Identity = 273/376 (72.61%), Postives = 316/376 (84.04%), Query Frame = 0


Query: 1   MQKSTSTSS---LGPGGLDLSQAFFKPIRDASPPSTSKRNTKISVIGAGNVGMAIAQTIL 60
           M+K+ STSS   LGP GLDL+ AFFKPI ++ P   S R TK+SV+G GNVGMAIAQTIL
Sbjct: 1   MEKNASTSSLKDLGPSGLDLTSAFFKPIHNSDPSLPSNRRTKVSVVGVGNVGMAIAQTIL 60

Query: 61  TQDLVDELILVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSVTAGSDLCIVTAGARQ 120
           TQDL DE+ LVDAKPDKLRGEMLDLQHAAAFLPRTKI+AS DY VTAGSDLCIVTAGARQ
Sbjct: 61  TQDLADEIALVDAKPDKLRGEMLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQ 120

Query: 121 IAGESRLNLLQRNVALFQKIVPPLVQFSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIG 180
             GESRLNLLQRNVALF+ I+PPL + SPD+IL+IVSNPVDVLTYVAWKLSGFP NRV+G
Sbjct: 121 NPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNRVLG 180

Query: 181 SGTNLDSSRFRFLIADHLDVNAQDVQGPNFYQNEKVNSKFTQNYIYVLKAYIVGEHGDSS 240
           SGTNLDSSRFRFLIADHLDVNAQDVQ                       A+IVGEHGDSS
Sbjct: 181 SGTNLDSSRFRFLIADHLDVNAQDVQ-----------------------AFIVGEHGDSS 240

Query: 241 VALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVISLKGYTSWAIGYSVA 300
           VALWSSISVGG+P+LSFL+  QIAYEK+TLE IH+ V+G AYEVI LKGYTSWAIGYSVA
Sbjct: 241 VALWSSISVGGIPVLSFLEKNQIAYEKQTLEDIHQAVVGSAYEVIGLKGYTSWAIGYSVA 300

Query: 301 SLARSLIRDQRRIHPVSVFAKGFYGIDGGDLFLSLPAQLGRGGVLGITNVHLTEEESRRL 360
           +LAR+++RDQR+IHPV+V A+GFYG+DGGD+FLSLPA LGR GV+ +TNVH+T+EE+ +L
Sbjct: 301 NLARTILRDQRKIHPVTVLARGFYGVDGGDVFLSLPALLGRNGVVAVTNVHMTDEEAEKL 353

Query: 361 RDSANTILQVQTELGI 374
           + SA TIL++Q++LG+
Sbjct: 361 QKSAKTILEMQSQLGL 353

The following BLAST results are available for this feature:

BLAST of Clc01G04240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906687.1	2.8e-183	91.42	L-lactate dehydrogenase A [Benincasa hispida]	[more]
XP_008437100.2	3.5e-181	90.62	PREDICTED: L-lactate dehydrogenase A [Cucumis melo]	[more]
XP_004151663.3	1.0e-180	89.81	L-lactate dehydrogenase A-like [Cucumis sativus]	[more]
KAA0039708.1	2.9e-180	90.08	L-lactate dehydrogenase A [Cucumis melo var. makuwa]	[more]
KAE8647895.1	4.2e-179	89.01	hypothetical protein Csa_000230 [Cucumis sativus]	[more]

BLAST of Clc01G04240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P22988	5.7e-126	65.50	L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
P22989	4.5e-123	63.84	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
P29038	1.3e-119	63.23	L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1	[more]
P06151	2.2e-90	52.85	L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3	[more]
Q9W7M6	8.5e-90	50.42	L-lactate dehydrogenase A chain OS=Ambystoma mexicanum OX=8296 GN=LDHA PE=2 SV=1	[more]

BLAST of Clc01G04240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATB9	1.7e-181	90.62	L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1	[more]
A0A5A7T9X6	1.4e-180	90.08	L-lactate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1E3A1	7.3e-177	87.94	L-lactate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111430410 PE=3 SV=1	[more]
A0A6J1H2Z1	2.1e-176	88.20	L-lactate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111459629 PE=3 SV=1	[more]
A0A6J1DPR5	3.6e-176	87.94	L-lactate dehydrogenase OS=Momordica charantia OX=3673 GN=LOC111021951 PE=3 SV=1	[more]

BLAST of Clc01G04240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17260.1	1.5e-153	72.61	Lactate/malate dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001557	L-lactate/malate dehydrogenase	PRINTS	PR00086	LLDHDRGNASE	coord: 175..193 score: 68.42 coord: 39..63 score: 48.2 coord: 64..88 score: 50.85 coord: 151..171 score: 71.81
IPR001557	L-lactate/malate dehydrogenase	PIRSF	PIRSF000102	Lac_mal_DH	coord: 34..373 e-value: 3.5E-99 score: 329.8
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 180..365 e-value: 8.1E-18 score: 65.0
None	No IPR available	GENE3D	3.40.50.720		coord: 22..179 e-value: 5.9E-58 score: 197.2
None	No IPR available	PANTHER	PTHR43128	L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))	coord: 225..373
None	No IPR available	PANTHER	PTHR43128:SF23	L-LACTATE DEHYDROGENASE	coord: 1..204
None	No IPR available	PANTHER	PTHR43128	L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))	coord: 1..204
None	No IPR available	PANTHER	PTHR43128:SF23	L-LACTATE DEHYDROGENASE	coord: 225..373
None	No IPR available	CDD	cd05293	LDH_1	coord: 35..370 e-value: 1.49227E-171 score: 478.637
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 38..177 e-value: 2.9E-43 score: 147.3
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	3.90.110.10		coord: 180..371 e-value: 1.3E-52 score: 179.7
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	SUPERFAMILY	56327	LDH C-terminal domain-like	coord: 178..369
IPR018177	L-lactate dehydrogenase, active site	PROSITE	PS00064	L_LDH	coord: 230..236
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 24..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G04240.2	Clc01G04240.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004459	L-lactate dehydrogenase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor