Clc01G03200 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G03200
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	RHOMBOID-like protein
Location	ClcChr01: 2929479 .. 2931778 (+)
RNA-Seq Expression	Clc01G03200
Synteny	Clc01G03200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCAAGATCTTGAGCGAGGAGCGGCCAAGAACCCACCCAATACTAACCCGAATAGGAACTATTCAACTGCTCCTTACTACATAGAGACTTCTGAGAAGCAATGGACGCCATGGTTGGTTCCTATGTTTGTTGTGGCTAATATTGCTATGTTCATTGTGGTCATGTATGTCAATAATTGCCCCGATTCCAATCTGGGTTTTGGAGATAAGTGTGTGGCAGGTTTTCTTGGGCGATTTTCGTTTCAGCCTATCAAGGAGAATCCCCTCTTGGGACCTTCTTCCAATACGTATGTCTCTTCTTTTGCTCTGTTTTTTCTTTATTTCTTTTGTGTTTTGTGTTTTGTGCTTTTATTGGAGTGTGTTTCTCGCGTGAGTTTGATTCTGTATGCTCCAGAATTATAGAGTTTCCTTTTGCCCTTTTGATTTAGTGGTCCATAATTAGTAATGTCCGAACATAAAACATGAATTTCTGGATTGAGAGTGTTTCTCCAATCTCCATGGGTTTGATTCTGCTCTGTTCTTTATTTCATCTTAGTTTTGTGTTTTGATTTGAAAGTGATTCTCTATGGTTTGATTCTGTATGCTCCAGAGTTCAAGAGTTTTGTCTTGCCCTTTTGATAAGAAGCCTAGAATTAGTGATATCTAGAACCTAAGACATGAACTTCTGGATTGAAAGTCATTCATCAATCTCCATGGGTTTGATTCGGCCTGTTCCTCTTCAGTTCATCTTAGTGTTGCGTTTGGTTTTTTTTATTTAGATTGTTTCTAGGTGGGTTTCACTCTGTATGCTCCATAATTTTGTTCCTCCCTCTGCATATTAGTTTGATTTTTGGGTCGATGGCAATTGTTGTTATAGTAATGTTTCAAACAAATACGCAACGTTTTTCTATGATTTGAATATGACAAAATTCTGTGGATTGGATTCTATTGCCGTTTCTGTGCGTCAGGGTTTGGTCCTTCAATCCCCTTAATTGAATCCATTTGCCTTAAAGGAACATTTTTTACTTTGCAGATTGGTGAAATTGGGAGCTCTGAAGTGGGATAAGGTTGTTCATGAGCATCAAGGATGGAGGCTTTTCTCCTGTATCTGGTTGCACGCTGGAATCATTCATCTTCTTGCTAATATGTTGAGTTTGGTTCTGATTGGAATCCGCCTCGAGCAGCAATTTGGATTTGGTATGTCTCGTGTAATTTTCCAAAATCTTTTCAGACTTTGTATCATGTTCTGTTCGTCTCAGAAAATTGTACTAGGAATGGGTTTAAATTTTTCTTCCTTTAGAATGGAAGATGGTGACGTAGCTTTTCATAACTCTGAAATTGAATACATGGCAAAATTAATACCCTCAAAGTCAAGACTTAAGTTAAAATTTCTTTGTTGAACGTATGTTAATGTAGCTAGGTGGACTTTGTGGGCACAACTTTTCTAATTATGTAGGATACTTTTCATCTTCCATTCCTATCTAAACATCTTATATTCATTTTTGCAGTGCGTATCGGGATAATATATCTCGTGGCTGGAGTTGGTGGGAGTGTAATGTCTTCCCTGTTCATCCAAAACAATATTTCTGTTGGTGCTTCTGGTGCTCTCTTTGGACTTCTCGGAGCTATGTTATCGGAGCTTTTGACGAACTGGACAATTTACACCAACAAGGTTAGCTACTAGGCAATAGGCATCAACTTTGACGTCGAATTTTTTTGTTTGTAATGGTTTTATCAGTTTACTTTTTGCTGTGACATGTTCCATAGCTAAAAAAAAAACTAATTTTGCTTTTGTAGGCTGCTGCACTATTCACCCTCATTGTCATCGTTGTTATTAACTTGGCAGTTGGAATTCTACCTCATGTCGACAACTTTGCCCACATTGGAGGATTCTTAACAGGGTTCCTTCTCGGGTTCGTGTTGCTTATCCGTCCACAGTTCAAGTGGACAGAGCGCCACCATCTCCCACCTGGTGCTCAACGTGTACCTAAGTATAAAACTTATCAGTATATTCTCTGGCTGGCTGCTGCAATTCTACTAGTTGCTGGGTAAAAGCTCACAACCCTTGCCTTTTATTGTAGTAGTCTTTGTTACTTTACTTTCAAGTTTCAACAAAATAGCATTTTGGATACGGATACCTAGAATGCTTCTTGTTGACATATTTGAATCATAGTAAGCTAATTCGGCTTGATATTTGTTGCAGCTTTACTGTGGGCCTCGTGATGCTATTCAGAGGGGAGAATGGAAACAAGCACTGCAGCTGGTGCCATTACCTAAGTTGTGTGCCAACCTCAAGATGGGACTGTGGAAATTAG

mRNA sequence

ATGTCGAATCAAGATCTTGAGCGAGGAGCGGCCAAGAACCCACCCAATACTAACCCGAATAGGAACTATTCAACTGCTCCTTACTACATAGAGACTTCTGAGAAGCAATGGACGCCATGGTTGGTTCCTATGTTTGTTGTGGCTAATATTGCTATGTTCATTGTGGTCATGTATGTCAATAATTGCCCCGATTCCAATCTGGGTTTTGGAGATAAGTGTGTGGCAGGTTTTCTTGGGCGATTTTCGTTTCAGCCTATCAAGGAGAATCCCCTCTTGGGACCTTCTTCCAATACATTGGTGAAATTGGGAGCTCTGAAGTGGGATAAGGTTGTTCATGAGCATCAAGGATGGAGGCTTTTCTCCTGTATCTGGTTGCACGCTGGAATCATTCATCTTCTTGCTAATATGTTGAGTTTGGTTCTGATTGGAATCCGCCTCGAGCAGCAATTTGGATTTGTGCGTATCGGGATAATATATCTCGTGGCTGGAGTTGGTGGGAGTGTAATGTCTTCCCTGTTCATCCAAAACAATATTTCTGTTGGTGCTTCTGGTGCTCTCTTTGGACTTCTCGGAGCTATGTTATCGGAGCTTTTGACGAACTGGACAATTTACACCAACAAGGCTGCTGCACTATTCACCCTCATTGTCATCGTTGTTATTAACTTGGCAGTTGGAATTCTACCTCATGTCGACAACTTTGCCCACATTGGAGGATTCTTAACAGGGTTCCTTCTCGGGTTCGTGTTGCTTATCCGTCCACAGTTCAAGTGGACAGAGCGCCACCATCTCCCACCTGGTGCTCAACGTGTACCTAAGTATAAAACTTATCAGTATATTCTCTGGCTGGCTGCTGCAATTCTACTAGTTGCTGGCTTTACTGTGGGCCTCGTGATGCTATTCAGAGGGGAGAATGGAAACAAGCACTGCAGCTGGTGCCATTACCTAAGTTGTGTGCCAACCTCAAGATGGGACTGTGGAAATTAG

Coding sequence (CDS)

ATGTCGAATCAAGATCTTGAGCGAGGAGCGGCCAAGAACCCACCCAATACTAACCCGAATAGGAACTATTCAACTGCTCCTTACTACATAGAGACTTCTGAGAAGCAATGGACGCCATGGTTGGTTCCTATGTTTGTTGTGGCTAATATTGCTATGTTCATTGTGGTCATGTATGTCAATAATTGCCCCGATTCCAATCTGGGTTTTGGAGATAAGTGTGTGGCAGGTTTTCTTGGGCGATTTTCGTTTCAGCCTATCAAGGAGAATCCCCTCTTGGGACCTTCTTCCAATACATTGGTGAAATTGGGAGCTCTGAAGTGGGATAAGGTTGTTCATGAGCATCAAGGATGGAGGCTTTTCTCCTGTATCTGGTTGCACGCTGGAATCATTCATCTTCTTGCTAATATGTTGAGTTTGGTTCTGATTGGAATCCGCCTCGAGCAGCAATTTGGATTTGTGCGTATCGGGATAATATATCTCGTGGCTGGAGTTGGTGGGAGTGTAATGTCTTCCCTGTTCATCCAAAACAATATTTCTGTTGGTGCTTCTGGTGCTCTCTTTGGACTTCTCGGAGCTATGTTATCGGAGCTTTTGACGAACTGGACAATTTACACCAACAAGGCTGCTGCACTATTCACCCTCATTGTCATCGTTGTTATTAACTTGGCAGTTGGAATTCTACCTCATGTCGACAACTTTGCCCACATTGGAGGATTCTTAACAGGGTTCCTTCTCGGGTTCGTGTTGCTTATCCGTCCACAGTTCAAGTGGACAGAGCGCCACCATCTCCCACCTGGTGCTCAACGTGTACCTAAGTATAAAACTTATCAGTATATTCTCTGGCTGGCTGCTGCAATTCTACTAGTTGCTGGCTTTACTGTGGGCCTCGTGATGCTATTCAGAGGGGAGAATGGAAACAAGCACTGCAGCTGGTGCCATTACCTAAGTTGTGTGCCAACCTCAAGATGGGACTGTGGAAATTAG

Protein sequence

MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDCGN

Homology

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BLAST of Clc01G03200 vs. NCBI nr
Match: XP_008437215.1 (PREDICTED: RHOMBOID-like protein 2 [Cucumis melo] >KAA0042791.1 RHOMBOID-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 650.6 bits (1677), Expect = 7.2e-183
Identity = 314/327 (96.02%), Postives = 324/327 (99.08%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPNTNPN NYS++ YYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSSSSYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP+SNLGFGDKCVAGFLGRFSFQPI+ENPLLGPSSNTLVKLGALKW+KVVHEHQGWRLF
Sbjct: 61  NCPNSNLGFGDKCVAGFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLF 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLV+IGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVI+VINLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLL+RPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAI+LVAGFT+GLVMLF
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAIVLVAGFTLGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDC N
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCAN 327

[Close]

BLAST of Clc01G03200 vs. NCBI nr
Match: XP_038874691.1 (RHOMBOID-like protein 2 [Benincasa hispida])

HSP 1 Score: 650.2 bits (1676), Expect = 9.5e-183
Identity = 316/327 (96.64%), Postives = 323/327 (98.78%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPNTNPN NYST+PYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNGNYSTSPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           +CP+SNLGF DKCVAGFLGRFSFQP+KENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF
Sbjct: 61  DCPNSNLGFRDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLL+RPQFKWTERH+LPP AQRVPKYKTYQYILWLAAAILLVAG TVG+VMLF
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHYLPPDAQRVPKYKTYQYILWLAAAILLVAGLTVGMVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDCGN
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 327

[Close]

BLAST of Clc01G03200 vs. NCBI nr
Match: XP_004143929.1 (RHOMBOID-like protein 2 [Cucumis sativus] >KGN50139.1 hypothetical protein Csa_000665 [Cucumis sativus])

HSP 1 Score: 650.2 bits (1676), Expect = 9.5e-183
Identity = 314/327 (96.02%), Postives = 322/327 (98.47%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPNTNPN NYST+PYY+ETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSTSPYYLETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCPDSNLGFGDKCVA FLGRFSFQPI+ENPLLGPSSNTLVKLGALKW+KVVHEHQGWRL 
Sbjct: 61  NCPDSNLGFGDKCVASFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLL 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIG+IYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNK AALFTLIVIVVINLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKVAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLL+RPQFKWTERHHLPPGA+RVPKYKTYQYILWLAAAILLVAGFT+GLVMLF
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGARRVPKYKTYQYILWLAAAILLVAGFTLGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDC N
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCAN 327

[Close]

BLAST of Clc01G03200 vs. NCBI nr
Match: XP_023533312.1 (RHOMBOID-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 638.6 bits (1646), Expect = 2.8e-179
Identity = 309/327 (94.50%), Postives = 316/327 (96.64%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPN+NP  NYS  PY++ETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNSNPTGNYSAPPYHVETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP +NLGFGDKCVAGFLGRFSFQP+KENPLLGPSSNTLVKLGALKWDKVVHEHQGWRL 
Sbjct: 61  NCPKTNLGFGDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLL 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLV+IGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIV INLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVAINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLLIRPQFKW ERHHLPP AQRVPKYK YQYILW+ AAILLVAGFTVGLVMLF
Sbjct: 241 TGFLLGFVLLIRPQFKWIERHHLPPSAQRVPKYKIYQYILWIVAAILLVAGFTVGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDCGN
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 327

[Close]

BLAST of Clc01G03200 vs. NCBI nr
Match: XP_022958114.1 (RHOMBOID-like protein 2 [Cucurbita moschata])

HSP 1 Score: 635.6 bits (1638), Expect = 2.4e-178
Identity = 308/327 (94.19%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPN+NP  NYS  PY++ETSEKQWT WLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNSNPTGNYSAPPYHVETSEKQWTAWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP +NLGFGDKCVAGFLGRFSFQP+KENPLLGPSSNTLVKLGALKWDKVVHEHQGWRL 
Sbjct: 61  NCPKTNLGFGDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLL 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLV+IGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIV INLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVAINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLLIRPQFKW ERHHLPP AQRVPKYK YQYILW+ AAILLVAGFTVGLVMLF
Sbjct: 241 TGFLLGFVLLIRPQFKWIERHHLPPSAQRVPKYKIYQYILWIVAAILLVAGFTVGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDCGN
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 327

[Close]

BLAST of Clc01G03200 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 4.2e-125
Identity = 219/326 (67.18%), Postives = 260/326 (79.75%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETS-EKQWTPWLVPMFVVANIAMFIVVMYV 60
           M+N+D+ER   K   N   N NY    +Y E+S E  WT WL+P  VVAN+A+FI VM+V
Sbjct: 1   MANRDVERVGKK---NRGANNNY----FYEESSGETHWTSWLIPAIVVANLAVFIAVMFV 60

Query: 61  NNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRL 120
           N+CP    G   +CVA FLGRFSFQP+KENPL GPSS+TL K+GAL+W KVVHEHQGWRL
Sbjct: 61  NDCPKKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRL 120

Query: 121 FSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNIS 180
            SC+WLHAGIIHLL NMLSL+ IGIRLEQQFGF+R+G+IYL++G+GGS++SSLF+Q +IS
Sbjct: 121 LSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESIS 180

Query: 181 VGASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGF 240
           VGASGALFGLLGAMLSELLTNWTIY NKAAAL TL+ I+ INLA+G+LP VDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGF 240

Query: 241 LTGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVML 300
           LTGF LGFVLL+RPQ+ W          +R  KY  YQY+L++ + +LLV G TV LVML
Sbjct: 241 LTGFCLGFVLLVRPQYGWEASRTNTSRTKR--KYSMYQYVLFVVSVVLLVVGLTVALVML 300

Query: 301 FRGENGNKHCSWCHYLSCVPTSRWDC 326
           F+GENGNKHC WCHYLSC PTS+W C
Sbjct: 301 FKGENGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Clc01G03200 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 2.1e-124
Identity = 208/292 (71.23%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 36  QWTPWLVPMFVVANIAMFIVVMYVNNCPD--SNLGFGDKCVAGFLGRFSFQPIKENPLLG 95
           +WT WLVPMFVVAN+A+F+V M+VNNCP+   +      CVA FLGR SF+P++ NPL G
Sbjct: 52  RWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFG 111

Query: 96  PSSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFV 155
           PSS+TL KLGAL+W KVV + +GWRL +CIWLHAG+IHL ANMLSLV IGIRLEQQFGFV
Sbjct: 112 PSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFV 171

Query: 156 RIGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFT 215
           RIG+IYL++G+GGSV+SSLFI+N+ISVGASGALFGLLG+MLSEL TNWTIY+NK AAL T
Sbjct: 172 RIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLT 231

Query: 216 LIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKY 275
           L+ +++INLA+GILPHVDNFAH+GGF+TGFLLGF+LL RPQFKW  R H+P G     KY
Sbjct: 232 LLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPLRYKY 291

Query: 276 KTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           KTYQY+LWL + +LL+AGF V L+MLFRGENGN HC WCHYL CVPTS W C
Sbjct: 292 KTYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTSSWRC 343

[Close]

BLAST of Clc01G03200 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-112
Identity = 195/294 (66.33%), Postives = 237/294 (80.61%), Query Frame = 0


Query: 35  KQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGP 94
           K W PWLVP  VVANIA+F + M++NNCP ++      C+A FLGRF+FQP+KENPLLGP
Sbjct: 52  KLWFPWLVPAIVVANIALFAISMFINNCPKNSA----YCLARFLGRFAFQPMKENPLLGP 111

Query: 95  SSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVR 154
           SS TL K+GAL    VVH+H+ WRLF+CIWLHAG+ H+LANMLSL+ IGIRLEQ+FGFVR
Sbjct: 112 SSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVR 171

Query: 155 IGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFTL 214
           IG++Y+++G GGS++SSLF +  ISVGASGALFGLLGAMLSELLTNWTIY NK AAL TL
Sbjct: 172 IGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTL 231

Query: 215 IVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTERHHLPPG---AQRVP 274
           I I+ INLAVGILPHVDNFAH+GGF +GFLLGFV LIRPQ+ +  + + P G        
Sbjct: 232 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKS 291

Query: 275 KYKTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           K+K YQY+LW+ + +LL+AG+T GLV+L RG + NKHCSWCHYLSC+PTS W C
Sbjct: 292 KHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 341

[Close]

BLAST of Clc01G03200 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.7e-108
Identity = 185/293 (63.14%), Postives = 228/293 (77.82%), Query Frame = 0


Query: 34  EKQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLG 93
           + QWT WL P  VVAN+++FIVVMY N+CP +  G    CVA  L RFSFQP++ENP LG
Sbjct: 15  DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 74

Query: 94  PSSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFV 153
           PSS+TL KLGAL W KVV  ++ WRL + +WLHAGIIHL+ NM  +++ GIRLEQQFGF+
Sbjct: 75  PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 134

Query: 154 RIGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFT 213
           RIG+IYL++G GGS++S+LF+Q +ISVGASGAL GL+GAMLSELLTNWTIY +K  AL +
Sbjct: 135 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 194

Query: 214 LIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTE-RHHLPPGAQRVPK 273
            + I+ INLA+G+LP VDNFAHIGG LTGF LGF+LL++PQ  W E R+    GA+   K
Sbjct: 195 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 254

Query: 274 YKTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           Y   QY+L+  AA+L+VAG TVGLVMLF GENGNKHC WCH L C PTS+W C
Sbjct: 255 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Clc01G03200 vs. ExPASy Swiss-Prot
Match: F4JBM4 (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 4.8e-105
Identity = 179/291 (61.51%), Postives = 229/291 (78.69%), Query Frame = 0


Query: 35  KQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGP 94
           + W PWL+P FVVAN+A+F++ MYVNNCP  +   GD C A FLGRFSFQ  +ENPLLGP
Sbjct: 62  RSWFPWLIPCFVVANVAVFVITMYVNNCPKKS---GD-CFADFLGRFSFQNTRENPLLGP 121

Query: 95  SSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVR 154
           SS TL  +G L   KVV   +GWRL SC WLH G++HLL NML+L+ IGIR+E++FGF+R
Sbjct: 122 SSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIR 181

Query: 155 IGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFTL 214
           IG++YL++G GGS++S+LF+++NISVGASGA+FGLLG MLSE+  NWTIY+NK   + TL
Sbjct: 182 IGLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTL 241

Query: 215 IVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYK 274
           ++IV +NL +G+LP VDNFAHIGGF TGFLLGFVLLIRP + W  + +  PGA +  ++K
Sbjct: 242 VLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRN-GPGA-KPHRFK 301

Query: 275 TYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
            YQ ILW  + ++LVAGF VGL+ LF   +GN+HCSWCHYLSCVPTS+W C
Sbjct: 302 IYQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSC 346

[Close]

BLAST of Clc01G03200 vs. ExPASy TrEMBL
Match: A0A5A7TMJ5 (RHOMBOID-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002940 PE=3 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.5e-183
Identity = 314/327 (96.02%), Postives = 324/327 (99.08%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPNTNPN NYS++ YYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSSSSYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP+SNLGFGDKCVAGFLGRFSFQPI+ENPLLGPSSNTLVKLGALKW+KVVHEHQGWRLF
Sbjct: 61  NCPNSNLGFGDKCVAGFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLF 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLV+IGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVI+VINLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLL+RPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAI+LVAGFT+GLVMLF
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAIVLVAGFTLGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDC N
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCAN 327

[Close]

BLAST of Clc01G03200 vs. ExPASy TrEMBL
Match: A0A1S3AU27 (RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103482712 PE=3 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.5e-183
Identity = 314/327 (96.02%), Postives = 324/327 (99.08%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPNTNPN NYS++ YYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSSSSYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP+SNLGFGDKCVAGFLGRFSFQPI+ENPLLGPSSNTLVKLGALKW+KVVHEHQGWRLF
Sbjct: 61  NCPNSNLGFGDKCVAGFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLF 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLV+IGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVI+VINLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIIVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLL+RPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAI+LVAGFT+GLVMLF
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAIVLVAGFTLGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDC N
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCAN 327

[Close]

BLAST of Clc01G03200 vs. ExPASy TrEMBL
Match: A0A0A0KMN4 (RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G155500 PE=3 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 4.6e-183
Identity = 314/327 (96.02%), Postives = 322/327 (98.47%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPNTNPN NYST+PYY+ETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNTNPNANYSTSPYYLETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCPDSNLGFGDKCVA FLGRFSFQPI+ENPLLGPSSNTLVKLGALKW+KVVHEHQGWRL 
Sbjct: 61  NCPDSNLGFGDKCVASFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLL 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIG+IYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNK AALFTLIVIVVINLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKVAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLL+RPQFKWTERHHLPPGA+RVPKYKTYQYILWLAAAILLVAGFT+GLVMLF
Sbjct: 241 TGFLLGFVLLVRPQFKWTERHHLPPGARRVPKYKTYQYILWLAAAILLVAGFTLGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDC N
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCAN 327

[Close]

BLAST of Clc01G03200 vs. ExPASy TrEMBL
Match: A0A6J1H457 (RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111459437 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 308/327 (94.19%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPN+NP  NYS  PY++ETSEKQWT WLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNSNPTGNYSAPPYHVETSEKQWTAWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP +NLGFGDKCVAGFLGRFSFQP+KENPLLGPSSNTLVKLGALKWDKVVHEHQGWRL 
Sbjct: 61  NCPKTNLGFGDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLL 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCIWLHAGIIHLLANMLSLV+IGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV
Sbjct: 121 SCIWLHAGIIHLLANMLSLVVIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIV INLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVAINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLLIRPQFKW ERHHLPP AQRVPKYK YQYILW+ AAILLVAGFTVGLVMLF
Sbjct: 241 TGFLLGFVLLIRPQFKWIERHHLPPSAQRVPKYKIYQYILWIVAAILLVAGFTVGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDCGN
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 327

[Close]

BLAST of Clc01G03200 vs. ExPASy TrEMBL
Match: A0A6J1JZC3 (RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111491076 PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 2.7e-175
Identity = 304/327 (92.97%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60
           MSNQDLERGAAKNPPN+NP  NYS  PY++ETSEKQWTPWLVPMFVVANIAMFIVVMYVN
Sbjct: 1   MSNQDLERGAAKNPPNSNPTGNYSAPPYHVETSEKQWTPWLVPMFVVANIAMFIVVMYVN 60

Query: 61  NCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLF 120
           NCP +NLGF DKCVAGFLGRFSFQP+KENPLLGPSSNTLVKLGALKWDKVVHEHQGWRL 
Sbjct: 61  NCPKTNLGFEDKCVAGFLGRFSFQPLKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRLL 120

Query: 121 SCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNISV 180
           SCI LHAGIIHLL+NMLSLV+IGIRLEQQFGFV IGIIYLVAGVGGSVMSSLFIQN+ISV
Sbjct: 121 SCILLHAGIIHLLSNMLSLVVIGIRLEQQFGFVCIGIIYLVAGVGGSVMSSLFIQNSISV 180

Query: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGFL 240
           GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIV INLAVGILPHVDNFAHIGGFL
Sbjct: 181 GASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVAINLAVGILPHVDNFAHIGGFL 240

Query: 241 TGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVMLF 300
           TGFLLGFVLLIRPQFKW ERHHLPP AQRVPKYK YQYILW+ AAILLVAGFTVGLVMLF
Sbjct: 241 TGFLLGFVLLIRPQFKWIERHHLPPSAQRVPKYKIYQYILWIVAAILLVAGFTVGLVMLF 300

Query: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 328
           RGENGNKHCSWCHYLSCVPTSRWDCGN
Sbjct: 301 RGENGNKHCSWCHYLSCVPTSRWDCGN 327

[Close]

BLAST of Clc01G03200 vs. TAIR 10
Match: AT1G63120.1 (RHOMBOID-like 2 )

HSP 1 Score: 449.1 bits (1154), Expect = 3.0e-126
Identity = 219/326 (67.18%), Postives = 260/326 (79.75%), Query Frame = 0


Query: 1   MSNQDLERGAAKNPPNTNPNRNYSTAPYYIETS-EKQWTPWLVPMFVVANIAMFIVVMYV 60
           M+N+D+ER   K   N   N NY    +Y E+S E  WT WL+P  VVAN+A+FI VM+V
Sbjct: 1   MANRDVERVGKK---NRGANNNY----FYEESSGETHWTSWLIPAIVVANLAVFIAVMFV 60

Query: 61  NNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGPSSNTLVKLGALKWDKVVHEHQGWRL 120
           N+CP    G   +CVA FLGRFSFQP+KENPL GPSS+TL K+GAL+W KVVHEHQGWRL
Sbjct: 61  NDCPKKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRL 120

Query: 121 FSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGIIYLVAGVGGSVMSSLFIQNNIS 180
            SC+WLHAGIIHLL NMLSL+ IGIRLEQQFGF+R+G+IYL++G+GGS++SSLF+Q +IS
Sbjct: 121 LSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESIS 180

Query: 181 VGASGALFGLLGAMLSELLTNWTIYTNKAAALFTLIVIVVINLAVGILPHVDNFAHIGGF 240
           VGASGALFGLLGAMLSELLTNWTIY NKAAAL TL+ I+ INLA+G+LP VDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGF 240

Query: 241 LTGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKYKTYQYILWLAAAILLVAGFTVGLVML 300
           LTGF LGFVLL+RPQ+ W          +R  KY  YQY+L++ + +LLV G TV LVML
Sbjct: 241 LTGFCLGFVLLVRPQYGWEASRTNTSRTKR--KYSMYQYVLFVVSVVLLVVGLTVALVML 300

Query: 301 FRGENGNKHCSWCHYLSCVPTSRWDC 326
           F+GENGNKHC WCHYLSC PTS+W C
Sbjct: 301 FKGENGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Clc01G03200 vs. TAIR 10
Match: AT5G07250.1 (RHOMBOID-like protein 3 )

HSP 1 Score: 446.8 bits (1148), Expect = 1.5e-125
Identity = 208/292 (71.23%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 36  QWTPWLVPMFVVANIAMFIVVMYVNNCPD--SNLGFGDKCVAGFLGRFSFQPIKENPLLG 95
           +WT WLVPMFVVAN+A+F+V M+VNNCP+   +      CVA FLGR SF+P++ NPL G
Sbjct: 52  RWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFG 111

Query: 96  PSSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFV 155
           PSS+TL KLGAL+W KVV + +GWRL +CIWLHAG+IHL ANMLSLV IGIRLEQQFGFV
Sbjct: 112 PSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFV 171

Query: 156 RIGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFT 215
           RIG+IYL++G+GGSV+SSLFI+N+ISVGASGALFGLLG+MLSEL TNWTIY+NK AAL T
Sbjct: 172 RIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLT 231

Query: 216 LIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTERHHLPPGAQRVPKY 275
           L+ +++INLA+GILPHVDNFAH+GGF+TGFLLGF+LL RPQFKW  R H+P G     KY
Sbjct: 232 LLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPLRYKY 291

Query: 276 KTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           KTYQY+LWL + +LL+AGF V L+MLFRGENGN HC WCHYL CVPTS W C
Sbjct: 292 KTYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTSSWRC 343

[Close]

BLAST of Clc01G03200 vs. TAIR 10
Match: AT2G29050.1 (RHOMBOID-like 1 )

HSP 1 Score: 407.5 bits (1046), Expect = 9.9e-114
Identity = 195/294 (66.33%), Postives = 237/294 (80.61%), Query Frame = 0


Query: 35  KQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLGP 94
           K W PWLVP  VVANIA+F + M++NNCP ++      C+A FLGRF+FQP+KENPLLGP
Sbjct: 52  KLWFPWLVPAIVVANIALFAISMFINNCPKNSA----YCLARFLGRFAFQPMKENPLLGP 111

Query: 95  SSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVR 154
           SS TL K+GAL    VVH+H+ WRLF+CIWLHAG+ H+LANMLSL+ IGIRLEQ+FGFVR
Sbjct: 112 SSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVR 171

Query: 155 IGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFTL 214
           IG++Y+++G GGS++SSLF +  ISVGASGALFGLLGAMLSELLTNWTIY NK AAL TL
Sbjct: 172 IGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTL 231

Query: 215 IVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTERHHLPPG---AQRVP 274
           I I+ INLAVGILPHVDNFAH+GGF +GFLLGFV LIRPQ+ +  + + P G        
Sbjct: 232 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKS 291

Query: 275 KYKTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           K+K YQY+LW+ + +LL+AG+T GLV+L RG + NKHCSWCHYLSC+PTS W C
Sbjct: 292 KHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 341

[Close]

BLAST of Clc01G03200 vs. TAIR 10
Match: AT1G12750.1 (RHOMBOID-like protein 6 )

HSP 1 Score: 392.5 bits (1007), Expect = 3.3e-109
Identity = 185/293 (63.14%), Postives = 228/293 (77.82%), Query Frame = 0


Query: 34  EKQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLG 93
           + QWT WL P  VVAN+++FIVVMY N+CP +  G    CVA  L RFSFQP++ENP LG
Sbjct: 15  DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 74

Query: 94  PSSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFV 153
           PSS+TL KLGAL W KVV  ++ WRL + +WLHAGIIHL+ NM  +++ GIRLEQQFGF+
Sbjct: 75  PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 134

Query: 154 RIGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFT 213
           RIG+IYL++G GGS++S+LF+Q +ISVGASGAL GL+GAMLSELLTNWTIY +K  AL +
Sbjct: 135 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 194

Query: 214 LIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTE-RHHLPPGAQRVPK 273
            + I+ INLA+G+LP VDNFAHIGG LTGF LGF+LL++PQ  W E R+    GA+   K
Sbjct: 195 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 254

Query: 274 YKTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           Y   QY+L+  AA+L+VAG TVGLVMLF GENGNKHC WCH L C PTS+W C
Sbjct: 255 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Clc01G03200 vs. TAIR 10
Match: AT1G12750.2 (RHOMBOID-like protein 6 )

HSP 1 Score: 392.5 bits (1007), Expect = 3.3e-109
Identity = 185/293 (63.14%), Postives = 228/293 (77.82%), Query Frame = 0


Query: 34  EKQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVAGFLGRFSFQPIKENPLLG 93
           + QWT WL P  VVAN+++FIVVMY N+CP +  G    CVA  L RFSFQP++ENP LG
Sbjct: 15  DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 74

Query: 94  PSSNTLVKLGALKWDKVVHEHQGWRLFSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFV 153
           PSS+TL KLGAL W KVV  ++ WRL + +WLHAGIIHL+ NM  +++ GIRLEQQFGF+
Sbjct: 75  PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 134

Query: 154 RIGIIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKAAALFT 213
           RIG+IYL++G GGS++S+LF+Q +ISVGASGAL GL+GAMLSELLTNWTIY +K  AL +
Sbjct: 135 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 194

Query: 214 LIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLIRPQFKWTE-RHHLPPGAQRVPK 273
            + I+ INLA+G+LP VDNFAHIGG LTGF LGF+LL++PQ  W E R+    GA+   K
Sbjct: 195 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 254

Query: 274 YKTYQYILWLAAAILLVAGFTVGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 326
           Y   QY+L+  AA+L+VAG TVGLVMLF GENGNKHC WCH L C PTS+W C
Sbjct: 255 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

The following BLAST results are available for this feature:

BLAST of Clc01G03200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437215.1	7.2e-183	96.02	PREDICTED: RHOMBOID-like protein 2 [Cucumis melo] >KAA0042791.1 RHOMBOID-like pr...	[more]
XP_038874691.1	9.5e-183	96.64	RHOMBOID-like protein 2 [Benincasa hispida]	[more]
XP_004143929.1	9.5e-183	96.02	RHOMBOID-like protein 2 [Cucumis sativus] >KGN50139.1 hypothetical protein Csa_0...	[more]
XP_023533312.1	2.8e-179	94.50	RHOMBOID-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022958114.1	2.4e-178	94.19	RHOMBOID-like protein 2 [Cucurbita moschata]	[more]

BLAST of Clc01G03200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAN1	4.2e-125	67.18	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
Q9LYP1	2.1e-124	71.23	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
Q0WQX7	1.4e-112	66.33	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
Q8VZ48	4.7e-108	63.14	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
F4JBM4	4.8e-105	61.51	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]

BLAST of Clc01G03200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMJ5	3.5e-183	96.02	RHOMBOID-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44...	[more]
A0A1S3AU27	3.5e-183	96.02	RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103482712 PE=3 SV=1	[more]
A0A0A0KMN4	4.6e-183	96.02	RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G155500 PE=3 SV=1	[more]
A0A6J1H457	1.2e-178	94.19	RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111459437 PE=3 SV=1	[more]
A0A6J1JZC3	2.7e-175	92.97	RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111491076 PE=3 SV=1	[more]

BLAST of Clc01G03200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63120.1	3.0e-126	67.18	RHOMBOID-like 2	[more]
AT5G07250.1	1.5e-125	71.23	RHOMBOID-like protein 3	[more]
AT2G29050.1	9.9e-114	66.33	RHOMBOID-like 1	[more]
AT1G12750.1	3.3e-109	63.14	RHOMBOID-like protein 6	[more]
AT1G12750.2	3.3e-109	63.14	RHOMBOID-like protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 111..252 e-value: 1.4E-41 score: 141.9
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 72..254 e-value: 3.7E-40 score: 139.6
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 36..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR22936:SF93	RHOMBOID-LIKE PROTEIN	coord: 3..327
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 3..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G03200.1	Clc01G03200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity