Clc01G02660 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G02660
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA helicase
LocationClcChr01: 2364794 .. 2374162 (-)
RNA-Seq ExpressionClc01G02660
SyntenyClc01G02660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTGAGCCAAATTATTATTACTATTTCGACTATTTTACTTTTTAGTATGTGAAATCGGCGAACAGCCGAAGCGCGAACGCCGATTCACCATTTAAAAGCCGAGGCGGTTCTTCATTTGATAGTCGGCAGCGTTCTTCGTCTATGAATTCCTTTTCATCACTCTCTTTCGCTTAAATCAATCGATTCTCAATCACACAACAGCCTCTGCATCTCATTTTCCAAGCTATGGGACACGGTAGATTCTGGTTTATTACAAACTTTGTGCTCTTGTTCTTAATTTCTTTTTTTTTTTTGGTTGGATTGTTTATTTTCGTCCAGGAGAATATTAGTTTTCATGTAGAATATTTAATGTTTCAGGTGACAAAGGAAGACCCAGCAAAAAACCTAAATTCGGCAAGGTTTGTTTGGTTTTGAACTCCAGGTTATTTTGATAGGTTCGGTGTTTTTGTATTGTGTAATAATGGTTGATCAATCGAGCACAATTTCAGGAGGATTACAAGAAAGCTTTTGAAGAAGATGATGTCTACCATCTTGACGATCTTGACGACGATGATCGCAATGGTAAATCTTCGTATATATGTTTCTATTTCCGAAGGATTGTAGGATTATTTGGTTTGATCAATGAATTGCTTTGTTATTTGGTTTGGCTTTCTAATTGATTGAGTTAATGGAATTTTAGGTGATAAAGAAGGAGGCAAGAGAGATTTCAGCAAATTGGAGTTGAAACCTGACCATGCTAATCGGCCCTTATGGGCTTGTGCTGATGGTCGGATATTCCTCGAAACTTTCTCACCATTGTACAAACAGGCATATGATTTCCTTATTGCAATCGCGGAACCAGTTTGCAGGTAACTCAGATCTTCTGAAGCAGAAAATTGTGGTGGATTCACGTTAGGATTAAGTTATTCTTCATGTCAATGTGTTAATTTGATGCATATTCAGGCCAGAATCAATGCACGAGTACAACCTCACTCCACATTCTTTGTATGCTGCGGTGTCTGTTGGTTTGGAGACAGAAACAATTATCGCAGTTCTGAGTAAGCTGTCTAAGGCCAAACTTCCCAAGGAGATGATTGATTTCATTTATGCTTCTACTGCCAACTATGGCAAGGTGAAGCTTGTCCTTAAAAAGAACCGATATCTTGTGGAATCCCCATTTCCAGAGGCAAGTGCTCACTTAACTTGGTTCCTTGTTTCGATGGAAATACATAGCCTTGTCATTATTGGTGATCTAAATGGTTGCTTAATAGCTGCAGGTGTTGCAGAAATTGCTGAAGGATGAGGTTATAGGCAGAGCCAGAATTAGTCCTGAGGTATGGTCCCGACTGCTGTGCTCATTTTTTATGCGTGGTTAACAACACAGTTGTTGTGGATTCTTCGGCTGTAGCTACACCTTGTTTATATTGATATTGGAATCTATCAGGATTCTCGTGGAAATGGTGAGTTTACAATTAGTAAAACAGCGGGTGAACTTGGCAGTCGCCATGAAGGATTGCTTAATGAAGCAGAAGCTGCAGCTGCAGCTGAGGAAAGAGAAACTCATTCATTTGAAATTGACCCATCACAAGTAATATGGTTTTCAAAATTTTAAGACTGACTGACAACAAATTGATGCCTACAACGTTTGTTGTTCTCCTCTTCTTATTTATTGTATTTTGGATCTTGATCAAATGACAGGTTGAAAATGTTAAACAGCGCTGCCTGCCCAATGCCTTAAATTATCCCATGTTGGAAGAGTATGACTTCAGAAATGACACTGTGAGTTCTTACATCCTTACATACCTGTATCCTTGATTCCTTGTTTTCCTCCACTGAATTGGGATGTTGGAAGGAGAATGGCCTCAAGTTTGAATTTTTTTTCGTATTTTCTGTATAAGAAATTTGTATCTTATTTCAATATTTATTCCTGGATTTTAGATCAATCCAGACTTGGATATGGAACTGAAACCACAGGCTCAGCCTAGGCCATATCAGGAAAAGAGTCTTAGCAAAATGTTTGGAAATGGTAGGTATCCTTGTTGCATGGTGTCTGTATTTTGCTTGTGTTGCTTGTGTTGCTTGTTATCAATTTTTTATAAGTAATCTCAGCACCCTATTTTATTCTTCTGTACATTTTGTAGAATAAATTTCTTTTTCGTTTATTTTGATTGTCTTTTGGTTTCAATGTGTGCTGAAAGCTTAAAAGTTGTGTTTTTTACTTTCTAATCAATAATTTTTTATAAAAAATTTAAGATCCTCCTATTTATGCCTTATATTTTTGGGCCTCATGATCAGTTTAGGTAACTTGGGTTTTTTTGTCCCTCTTTGAGTTCCCTGAATGCCTTAATTAAGAATAATCAGTTGTTTTATTTAGTTTCAAGCTCTGATTATGAACATATGTTTGCAGGTAGAGCAAGATCTGGCATTATTGTACTTCCTTGTGGAGCTGGGAAGTCTCTGGTCGGCGTTTCTGCAGCCAGTCGTATCCGGAAAAGTTGTCTATGTTTAGCTACAAATGCTGTATCAGTGGATCAGTGGGCTTTTCAGTTTAAGCTCTGGTCTACCATTCGAGATGATCAAATTTGTCGGTTCACGTCAGATAGTAAAGAAAGATTTCGAGGAAATGCGGGGGTGGTTGTTACAACCTATAACATGGTTGCTTTTGGTGGTAAAAGATCTGAAGAATCTGAAAAGATTATTGAAGAAATCAGAAACAGAGAATGGGGACTACTTCTCATGGACGAGGTAATTTTACCATTTTATGTTACTTATTGTTCTTTTAGTTACATTTTTAGTGCAAGTTTTCATCTATTCTCATCTATTCTGTTTCTAGGTGCACGTGGTTCCTGCTCACATGTTTCGTAAGGTTATCAGCCTGACTAAGTCTCACTGCAAGCTTGGGCTCACTGGTACATGACGTTATGGTCTTCTAACCCTCTTGGTTTTGTGGTTTCTGTTGATGCTGAAAATTAACTTTGATTAATTTATTTCAGCCACACTTGTGAGAGAAGACGAAAGAATTACAGATCTAAATTTTCTTATTGGTCCCAAGTTGTATGAAGCCAACTGGTTGGATCTTGTGAAAGGAGGATTTATTGCAAATGTGCAGTGTGCTGAAGTTTGGTGTCCTATGACAAAGGAGTTTTTTGCTGAATATCTGAAGAAAGAGAACTCAAAGAAAAAGCAGGTTTTTTAATTTCAATGAAATCAATTTTTTCTTATATTTATACATCTTGTGCCTGCCGTATTGGTCATCATCATGTTGAGAAGTGAGAGTGATGTTGTAGGTGACAATATAATATGGATATAACCAGTATGGTATGTTCTGGTTTAAGAAATTTTTTGACGTATTTTGGAATATGATATGTTTGTCTGCCATTAATATATTCACATTCTCCCCTGGTCGTTTTCTTCTCTTATATGCTGGATTTCACATTTCAGGCTCTTTATGTAATGAACCCTAATAAGTTCAGGGCGTGTGAGTTTCTCATACGGTTTCATGAACAGCAGCGTGGTGATAAGATAATTGTTTTCGCTGACAATCTTTTTGCGCTTACGGAGTATGCGATGAAGCTTCGTAAACCTATGATCTATGGTGCAACAAGGTTGGTAGACAAAATTGTTTTGCGTTGGAACAAACTCAACCTTACACATGTTTGACGTTCATAGTTGGATATTCATTTCATTTTCCAAATTTGTAGTCATATTGAGAGGACAAAAATTCTTGAAGCATTCAAAACTAGTCGTGATGTGAATACCGTTTTCCTTTCAAAGGTACTTTTCTTCTCTCATCCTTCCCTTTGCTTCTCTGTTTCCAAACCTCAATATATAATAATGAAAGTAGTAGTAGTAGTAATAACAATTAACAAGAATAAAAAGAATTGGATATAGTTGGTTTTAGATTAGGCCAGTGGACGTGTCACGTTATATTTTCTTCATTGTCAGTCAATCTGATGGACATAAATGAAGGTCAATAATTGAGTACAATGCGTAACAGCCAGCCAGTTTTCATTGTCAAGTAGTTGGCTAATAATCCGCCTTTTGTGAATTTTTATTGTTATTTTTGGCTGGATTGAGTCGTGAGTCCCTGGAGGCAACTGGGTTTTCAAATTGTTCCTGATTACTGACCAATTTGAGTTCTTTTTCCTCCTTCGTTTAAGAAACAAAGAAGGTGCATAAAAAAATCATGGAAACACAGCCTGGAGGCAGAGGGGTGGGCTACATCTCTCAAAATAAACTAGTGAAGCACTGCCTCCAAATCTAGGCTATAATTACAAAGAAGTGTCTCGTGTCTTAGATACCAAAAAGAAGAGTTAGATTGTTCAGAATTGAAAAGGAACTCAAATGTATACAACTTATCTTCAAAGACCATCTGATTTCTTTCTTTCCAAAGTTCCCAACAGAAAGCCCAAATGGAAGTTCTCCATAAAACCGTTGCTTTTCCTCTCAGGTTACCCTTCTGAAAATTCAAGAAGCCACTCCATCACAGAATTGGCAAACACATAGAGAGACGATAAGTCTTTAATAAAAGACACTATCCCTTCCCGACAAAAAGACACCAGAAAAATAAATGATCGAAGTCTTTGAACTTTTATAAGCCAGACTTCAAAGGAAATTTTTAATCTTCTTAGGCACATTAAACTTAAATATCATATCAACCAAGGTAGTTTGAAGCTTGTGGGAAGTTTCAGTGAGCTTGATGAATGCAGATTTTGTAGGGAAAAAACCCCAGATTTCTCCATGGACCAGCTCATTCTGTCCACGCCACCACCCTATCTTACAGTATCGATCAGCTAGACCAAACCAATCCAACTATCAAATTCTCTATCCATAATGTGTTTTCTGAAATCAAGGTCCCAATCATTAGTATCCGAATTAGAGCACTCTATAACCGTGGCTCCGTTCTTCAGGGAGATGAAGGCCCAACCACTTGTCTTTCCAAAACTTAATTCTGCCACCATTTTTAGCCTTGAAATTTATGAAACTGAGGAAGAAATCACTGTTTTTTGTGATCTCGAACCATGGCCTTCCTTTTGAAATACCCTTAGGTGAGAGGGAAGTCCACCCTAAGGGGTCACACACCCATAAATGCTGGTCTACAGTCTCCCTCCAAAGAGCTTGGTCTTCATGAACAAATCTTCATAGCCATTTCAGTAGAAGCGCATTGTTCCTTTGTTTCAGAAAACCAATTCCCAAGCCACCATATTGAAGAGGCAGAGCCATCCTTATTTTGAAGATTTTTTTATCAGTTACTTTAAAGTTACTTTTTGGCAAATCAGCGATCAAGTTTTTCTTCATAGAGATTTTTAGATTAGTATGACTTTGTTTAATAAGAAAATTAATATGACCTTTGAAAGAATATTTTTATTTATTAAGACTTTCAAACAAATCGTTTTAGTTGGAATACTTTTTCTGAAAAGTTATTAATAGCGTGAAGTCAAGATCATAGTCTCAAGAGTTGGATTCTTTGCTTTTGTTTTATTTCAGGTGGGTGATAACTCTATTGATATTCCTGAGGCAAATGTGATTATTCAGATATCATCACATGCGGGTTCAAGACGTCAAGAAGCCCAACGTCTGGGTCGTATTCTTAGGGCCAAGGTTAAAACTACATCTGCAGTTTAACATTTGTGCAGTTTTTCATGTTTCTGTTGAGCAGTTCGAAGGAATTAACAATCATTTGCAAATTTCATTCTGCATCACAAGAATTTTGGGTCTATGATTGTTAAAAGTCATCTATATTTCTTTTCATCTAATGTACCTTGTGCGGAATCATGCATAATTTTTACCTGAGATGGTGAATGACCTGCGTATGGTTCTTTACAAGAATACTTCTTGTATGGTACTCAAGGTGGAGATTAGCATGAGATTTTATTGTTAAAATAACTTGTAGATTGACTATATTCTTTTATTTATTTATTATTTATTTTTACTGGACCAACAGGGTAAACATCAGGACAGGATGGCTGGGGGCAAAGAGGAGTATAATGCCTTTTTCTATTCACTTGTTTCTACTGATACACAGGTTGACATCTATCCATTTTTATCTGGATAAAGTGTGTAAGAGTAGTTGTTTCTCTCTTGGTCTAATGAGATATAATGCATGTTGAATTTTAATGCAGGAAATGTACTATTCAACTAAACGACAACAGTTTTTGATCGATCAAGGTTATAGCTTTAAGGTAGTATTTTGTCTCAGCATTTGCTGAAAGCTTGTTTATTTAGATTTACGTGTTAAAAGGTTCTTATCCAAATTCTCGTTTAATTATTTTCATTAATGGCTCTCGTTTGGAATTTGTGAGAAATGGAAAACGAAGTTAAAGATTTTTGGACTTTTGGCATGCATGGTAGATGAATGCATGGAAAAAACAATGTAACTAGGATAGTCTAGAAGGTTTCTCATGCTATTTGCATCTAAAAATAATATGGGATCCATAAAATAAATTAATATATCATTTAATGATGTGAAAAAATATGAATGGAAGGAGTATAAACTAGTACTAAAATATTCGCAATGCACGTGCTGTCATTTCTTATAAAAGTGGAACTGTGACAGGTAATTACAAGCTTGCCACCAGCAGATGCAGGAGCTGATTTGAGCTATCATCGTCTTGATGATCAGTTGGCACTTCTTGGGAAGGTTACCATCTTCAGATATCGATCATCTTTACTCTTTTGAAAGATATTCTGACATGCTTTTTATATGTCAGGTACTGAATGCAGGCGATGATATGGTAGGATTGGAGCAGTTAGAAGATGATGCAGACCAAATTGCACTCGATAAGGCTCGACGTTCAATGGGATCCATGAGTGCAATGTCGGGAGCAAATGGCATGGTTTACATGGAGTATAGGTATAGCATATCTTGACCCCAAAAGTTATAACATAATCTAAACATAGAAAGAAATTGGCAGCAGGTATATCCGATACATTGGTTTCCAAAATTGTGTGTTTCCCTTTTTCAGCACTGGACGGAAACTCGCGGGTCAAGGGCAGCTTAAGAGCAAGCCAAAAGACCCGGCGAAGAGACATCATTTGTTCAAAAAACGGTTTGCCTGAGAGAACGACTGACCTGAATGGCTGGGCTGGGGCTTAGTCATGTCCTCAAAAAACATCGGCCAGCACAGAGGTAATGATGCATTTGGATTTGATCGATTGTTTGAGATGTTAATTATCGGAAGCTTATATAACAAATACCAAACGACCCTCTGCCTAGTTCTGTCTTTTGCTCCATCCCTCTGGCTTGAGGGAAAGATGTAGGAGCTGTATGACTAAAAACCTACAAACTAGTAATAATGTATGTATGAGTTGGTTAATTCCCCTCCATCTGTGTCGTACAAGGAGTCAAAAAAGAGGGGGAAAAAAAAGAGAGACCCTTTGAGAGAATTTCTTGGATAAAAGACTTTCCCAAAGCCTCAACAAGTCAAACTAAACAAAGAGCCCTTCCAATCTTCTTGAACTGGAAAGCTCTCGAATTTTCTGAGGATGTGAGAAGGCAAAAGATTCTTTGTTATCACGAGAGGGCCATTTGATAAGAAAGAAAGCAAAAGGAAAGAACAGTATTCTTTTACAAGAGGGGTGATGAATTCTAATGCAAAATAGTCAAATTTCAGTCTTCCCCTATTGATTTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACTTTATTAAATGTGTCTGAAACCAAGGAACCAAGAAGGAAAAGTTGAAGACGAAAGTGAAAGAATAGAGTATCTGAAGGAATTTTTGTTAAGGGAACCATCTATCAACTTCCTTGGGGTTGGTGTGGTTTATCAATTCTTATGCATATTTTATTTCGCTTTCAAAGGCTTGAATAAATAAATGTCCTATTGTAGTTTTATTTTTGTTTTTAAGTTTTGAGCTTTAGTTTGTAACAATTTAATCTTCTTACTTTTAAATTTATAATAATTTAGGCTTTGTTTGCTAACTAGTTAGTTTTCGAAAATTAAGCTTATTTTCTTACTTTCTTATGATGGTTTGCATCTTTCTTGAGTAAAAAAGTTGAATTCTCAGCCAAATTTCAAAAACAAAAACTAGTTTTAAAAATTACTTTTTCGTAAAAGGTAGATAACAAAACAAAAGGTTTAGAGGCGGAAGAGGTATTCATAGGCTTAATTTTCAAAAACTTAAAACCAAAACCAAATAGTTATTAAACGGAATCTTTGTTTTTTAACTTTAGAATATGACGATTTAGTCTCTATATTGATAATTTTATCAAAATCAATTGTCATTTTTTATTATGTAAATTTAGTCTTCATAGTTAATAATATTTTTAGGATAGGGTCTAAATTACTATAAATTGTAAAGTAATAGATCTAAATTTTCACTTAATAAAATGGCTAAATTGTTTCAAATTATATCAACTATATTATAGCAAACTAAAGTTTGGGACTAAATTATCACTTTTACATAAAAGTTCAATGACCAAAAGTGTGTTGTTCCCAATTCTAATCATCATTTTGCAAATATTTGAATTCCTTGGAATTGAAGATTTATTTAAGTTAGGCTCTTGTTGATATTTAGAAGTTCTTTTTTTCCTTCTCTTTAATTTATAAAAAATAACTCAGTTCAATTGGCATTTTAATAAGGTATATAGTCCGTTGTCAATTGAGCATAGATCAACTGGTTGAAGCACATACCAAAAGGTAAAAAGTTCAAAATTCCATCTCAAACATGTTAGAACTAAAAAGGAGAAGGAGAAGATATGTAATCAACATAGGACAAACTTTCAAAATATTTTTGTTCTTCGTTTGAAAATTTTTTTGAGGAAATTTCAGGATTGGGAACAGAATTTAAACCCTTTATTCCTTCTTAGGTGATGAGATTACAGGTTCTGAAACGACTCAACAAGTTTGCATCCTTGTTTGACAAGCTAGAGTTGACATTGATCATCTTTTTTTCCTTTATTTTTTCTTTTCTTCTTTTCGTGACAAAGGCTTTGTCTAGAATAATTGACGAATTGTTTAGGCAAATCACTCATTCTTAAAATCAATATTCTTAAACCATTGGTCGGTGAGGTTTGAGATTGTGTTTAATTAGATCACAAGATTTTGAAATTGAACGCTTTTGGACTAAAAAGGATCGGGAAATGGTTTTAATTGGTTCAGTTGTAAATGTTGATGATGATGTATGAGAATTTGGAATATTAGTGCTGACTTTCTTATAGTGGTATGGATTGTCACATCCTTCTAAATATTAATTTGTACTCGATATTTTAACAGTTTTTTACTCCTGGATAATTTTGAAACCTTTTAAAAGGTCGGGTACTCTCAATGTTCCTTTCTAAATCATGAAATGTATTTTACTAATTAATTCTTCTTAATTCTTTGTTTTTATACTTTCTTTTTCAAAACATATACATCG

mRNA sequence

TATTGAGCCAAATTATTATTACTATTTCGACTATTTTACTTTTTAGTATGTGAAATCGGCGAACAGCCGAAGCGCGAACGCCGATTCACCATTTAAAAGCCGAGGCGGTTCTTCATTTGATAGTCGGCAGCGTTCTTCGTCTATGAATTCCTTTTCATCACTCTCTTTCGCTTAAATCAATCGATTCTCAATCACACAACAGCCTCTGCATCTCATTTTCCAAGCTATGGGACACGGTGACAAAGGAAGACCCAGCAAAAAACCTAAATTCGGCAAGGAGGATTACAAGAAAGCTTTTGAAGAAGATGATGTCTACCATCTTGACGATCTTGACGACGATGATCGCAATGGTGATAAAGAAGGAGGCAAGAGAGATTTCAGCAAATTGGAGTTGAAACCTGACCATGCTAATCGGCCCTTATGGGCTTGTGCTGATGGTCGGATATTCCTCGAAACTTTCTCACCATTGTACAAACAGGCATATGATTTCCTTATTGCAATCGCGGAACCAGTTTGCAGGCCAGAATCAATGCACGAGTACAACCTCACTCCACATTCTTTGTATGCTGCGGTGTCTGTTGGTTTGGAGACAGAAACAATTATCGCAGTTCTGAGTAAGCTGTCTAAGGCCAAACTTCCCAAGGAGATGATTGATTTCATTTATGCTTCTACTGCCAACTATGGCAAGGTGAAGCTTGTCCTTAAAAAGAACCGATATCTTGTGGAATCCCCATTTCCAGAGGTGTTGCAGAAATTGCTGAAGGATGAGGTTATAGGCAGAGCCAGAATTAGTCCTGAGGATTCTCGTGGAAATGGTGAGTTTACAATTAGTAAAACAGCGGGTGAACTTGGCAGTCGCCATGAAGGATTGCTTAATGAAGCAGAAGCTGCAGCTGCAGCTGAGGAAAGAGAAACTCATTCATTTGAAATTGACCCATCACAAGTTGAAAATGTTAAACAGCGCTGCCTGCCCAATGCCTTAAATTATCCCATGTTGGAAGAGTATGACTTCAGAAATGACACTATCAATCCAGACTTGGATATGGAACTGAAACCACAGGCTCAGCCTAGGCCATATCAGGAAAAGAGTCTTAGCAAAATGTTTGGAAATGGTAGAGCAAGATCTGGCATTATTGTACTTCCTTGTGGAGCTGGGAAGTCTCTGGTCGGCGTTTCTGCAGCCAGTCGTATCCGGAAAAGTTGTCTATGTTTAGCTACAAATGCTGTATCAGTGGATCAGTGGGCTTTTCAGTTTAAGCTCTGGTCTACCATTCGAGATGATCAAATTTGTCGGTTCACGTCAGATAGTAAAGAAAGATTTCGAGGAAATGCGGGGGTGGTTGTTACAACCTATAACATGGTTGCTTTTGGTGGTAAAAGATCTGAAGAATCTGAAAAGATTATTGAAGAAATCAGAAACAGAGAATGGGGACTACTTCTCATGGACGAGGTGCACGTGGTTCCTGCTCACATGTTTCGTAAGGTTATCAGCCTGACTAAGTCTCACTGCAAGCTTGGGCTCACTGCCACACTTGTGAGAGAAGACGAAAGAATTACAGATCTAAATTTTCTTATTGGTCCCAAGTTGTATGAAGCCAACTGGTTGGATCTTGTGAAAGGAGGATTTATTGCAAATGTGCAGTGTGCTGAAGTTTGGTGTCCTATGACAAAGGAGTTTTTTGCTGAATATCTGAAGAAAGAGAACTCAAAGAAAAAGCAGGCTCTTTATGTAATGAACCCTAATAAGTTCAGGGCGTGTGAGTTTCTCATACGGTTTCATGAACAGCAGCGTGGTGATAAGATAATTGTTTTCGCTGACAATCTTTTTGCGCTTACGGAGTATGCGATGAAGCTTCGTAAACCTATGATCTATGGTGCAACAAGTCATATTGAGAGGACAAAAATTCTTGAAGCATTCAAAACTAGTCGTGATGTGAATACCGTTTTCCTTTCAAAGGTGGGTGATAACTCTATTGATATTCCTGAGGCAAATGTGATTATTCAGATATCATCACATGCGGGTTCAAGACGTCAAGAAGCCCAACGTCTGGGTCGTATTCTTAGGGCCAAGGGTAAACATCAGGACAGGATGGCTGGGGGCAAAGAGGAGTATAATGCCTTTTTCTATTCACTTGTTTCTACTGATACACAGGAAATGTACTATTCAACTAAACGACAACAGTTTTTGATCGATCAAGGTTATAGCTTTAAGGTAATTACAAGCTTGCCACCAGCAGATGCAGGAGCTGATTTGAGCTATCATCGTCTTGATGATCAGTTGGCACTTCTTGGGAAGGTACTGAATGCAGGCGATGATATGGTAGGATTGGAGCAGTTAGAAGATGATGCAGACCAAATTGCACTCGATAAGGCTCGACGTTCAATGGGATCCATGAGTGCAATGTCGGGAGCAAATGGCATGGTTTACATGGAGTATAGCACTGGACGGAAACTCGCGGGTCAAGGGCAGCTTAAGAGCAAGCCAAAAGACCCGGCGAAGAGACATCATTTGTTCAAAAAACGGTTTGCCTGAGAGAACGACTGACCTGAATGGCTGGGCTGGGGCTTAGTCATGTCCTCAAAAAACATCGGCCAGCACAGAGGTATATAGTCCGTTGTCAATTGAGCATAGATCAACTGGTTGAAGCACATACCAAAAGGTGATGAGATTACAGGTTCTGAAACGACTCAACAAGTTTGCATCCTTGTTTGACAAGCTAGAGTTGACATTGATCATCTTTTTTTCCTTTATTTTTTCTTTTCTTCTTTTCGTGACAAAGGCTTTGTCTAGAATAATTGACGAATTGTTTAGGCAAATCACTCATTCTTAAAATCAATATTCTTAAACCATTGGTCGGTGAGGTTTGAGATTGTGTTTAATTAGATCACAAGATTTTGAAATTGAACGCTTTTGGACTAAAAAGGATCGGGAAATGGTTTTAATTGGTTCAGTTGTAAATGTTGATGATGATGTATGAGAATTTGGAATATTAGTGCTGACTTTCTTATAGTGGTATGGATTGTCACATCCTTCTAAATATTAATTTGTACTCGATATTTTAACAGTTTTTTACTCCTGGATAATTTTGAAACCTTTTAAAAGGTCGGGTACTCTCAATGTTCCTTTCTAAATCATGAAATGTATTTTACTAATTAATTCTTCTTAATTCTTTGTTTTTATACTTTCTTTTTCAAAACATATACATCG

Coding sequence (CDS)

ATGGGACACGGTGACAAAGGAAGACCCAGCAAAAAACCTAAATTCGGCAAGGAGGATTACAAGAAAGCTTTTGAAGAAGATGATGTCTACCATCTTGACGATCTTGACGACGATGATCGCAATGGTGATAAAGAAGGAGGCAAGAGAGATTTCAGCAAATTGGAGTTGAAACCTGACCATGCTAATCGGCCCTTATGGGCTTGTGCTGATGGTCGGATATTCCTCGAAACTTTCTCACCATTGTACAAACAGGCATATGATTTCCTTATTGCAATCGCGGAACCAGTTTGCAGGCCAGAATCAATGCACGAGTACAACCTCACTCCACATTCTTTGTATGCTGCGGTGTCTGTTGGTTTGGAGACAGAAACAATTATCGCAGTTCTGAGTAAGCTGTCTAAGGCCAAACTTCCCAAGGAGATGATTGATTTCATTTATGCTTCTACTGCCAACTATGGCAAGGTGAAGCTTGTCCTTAAAAAGAACCGATATCTTGTGGAATCCCCATTTCCAGAGGTGTTGCAGAAATTGCTGAAGGATGAGGTTATAGGCAGAGCCAGAATTAGTCCTGAGGATTCTCGTGGAAATGGTGAGTTTACAATTAGTAAAACAGCGGGTGAACTTGGCAGTCGCCATGAAGGATTGCTTAATGAAGCAGAAGCTGCAGCTGCAGCTGAGGAAAGAGAAACTCATTCATTTGAAATTGACCCATCACAAGTTGAAAATGTTAAACAGCGCTGCCTGCCCAATGCCTTAAATTATCCCATGTTGGAAGAGTATGACTTCAGAAATGACACTATCAATCCAGACTTGGATATGGAACTGAAACCACAGGCTCAGCCTAGGCCATATCAGGAAAAGAGTCTTAGCAAAATGTTTGGAAATGGTAGAGCAAGATCTGGCATTATTGTACTTCCTTGTGGAGCTGGGAAGTCTCTGGTCGGCGTTTCTGCAGCCAGTCGTATCCGGAAAAGTTGTCTATGTTTAGCTACAAATGCTGTATCAGTGGATCAGTGGGCTTTTCAGTTTAAGCTCTGGTCTACCATTCGAGATGATCAAATTTGTCGGTTCACGTCAGATAGTAAAGAAAGATTTCGAGGAAATGCGGGGGTGGTTGTTACAACCTATAACATGGTTGCTTTTGGTGGTAAAAGATCTGAAGAATCTGAAAAGATTATTGAAGAAATCAGAAACAGAGAATGGGGACTACTTCTCATGGACGAGGTGCACGTGGTTCCTGCTCACATGTTTCGTAAGGTTATCAGCCTGACTAAGTCTCACTGCAAGCTTGGGCTCACTGCCACACTTGTGAGAGAAGACGAAAGAATTACAGATCTAAATTTTCTTATTGGTCCCAAGTTGTATGAAGCCAACTGGTTGGATCTTGTGAAAGGAGGATTTATTGCAAATGTGCAGTGTGCTGAAGTTTGGTGTCCTATGACAAAGGAGTTTTTTGCTGAATATCTGAAGAAAGAGAACTCAAAGAAAAAGCAGGCTCTTTATGTAATGAACCCTAATAAGTTCAGGGCGTGTGAGTTTCTCATACGGTTTCATGAACAGCAGCGTGGTGATAAGATAATTGTTTTCGCTGACAATCTTTTTGCGCTTACGGAGTATGCGATGAAGCTTCGTAAACCTATGATCTATGGTGCAACAAGTCATATTGAGAGGACAAAAATTCTTGAAGCATTCAAAACTAGTCGTGATGTGAATACCGTTTTCCTTTCAAAGGTGGGTGATAACTCTATTGATATTCCTGAGGCAAATGTGATTATTCAGATATCATCACATGCGGGTTCAAGACGTCAAGAAGCCCAACGTCTGGGTCGTATTCTTAGGGCCAAGGGTAAACATCAGGACAGGATGGCTGGGGGCAAAGAGGAGTATAATGCCTTTTTCTATTCACTTGTTTCTACTGATACACAGGAAATGTACTATTCAACTAAACGACAACAGTTTTTGATCGATCAAGGTTATAGCTTTAAGGTAATTACAAGCTTGCCACCAGCAGATGCAGGAGCTGATTTGAGCTATCATCGTCTTGATGATCAGTTGGCACTTCTTGGGAAGGTACTGAATGCAGGCGATGATATGGTAGGATTGGAGCAGTTAGAAGATGATGCAGACCAAATTGCACTCGATAAGGCTCGACGTTCAATGGGATCCATGAGTGCAATGTCGGGAGCAAATGGCATGGTTTACATGGAGTATAGCACTGGACGGAAACTCGCGGGTCAAGGGCAGCTTAAGAGCAAGCCAAAAGACCCGGCGAAGAGACATCATTTGTTCAAAAAACGGTTTGCCTGA

Protein sequence

MGHGDKGRPSKKPKFGKEDYKKAFEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLKDEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRSMGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA
Homology
[Close]
BLAST of Clc01G02660 vs. NCBI nr
Match: XP_038874425.1 (general transcription and DNA repair factor IIH helicase subunit XPB1 [Benincasa hispida])

HSP 1 Score: 1505.7 bits (3897), Expect = 0.0e+00
Identity = 762/769 (99.09%), Postives = 765/769 (99.48%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGDKGRPSKKPKFGKEDYKKA FEEDDVYHLDDLDDDDR GDK+GGKRDFSKLELKPD
Sbjct: 1   MGHGDKGRPSKKPKFGKEDYKKASFEEDDVYHLDDLDDDDRYGDKDGGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVIGRARI PEDSRGNG+FTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 181 DEVIGRARIIPEDSRGNGDFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS
Sbjct: 661 SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769
           MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA
Sbjct: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769

[Close]
BLAST of Clc01G02660 vs. NCBI nr
Match: XP_008437310.1 (PREDICTED: DNA repair helicase XPB1 [Cucumis melo])

HSP 1 Score: 1490.7 bits (3858), Expect = 0.0e+00
Identity = 757/768 (98.57%), Postives = 761/768 (99.09%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGD+GRPSKKPKFGKEDYKKA FE+DDVYHLDD DDDDRNGDKE GKRDFSKLELKPD
Sbjct: 1   MGHGDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVI RARI PEDS GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 181 DEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS
Sbjct: 661 SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           +GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF
Sbjct: 721 VGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 767

[Close]
BLAST of Clc01G02660 vs. NCBI nr
Match: XP_011654733.1 (general transcription and DNA repair factor IIH helicase subunit XPB1 [Cucumis sativus] >KAE8647852.1 hypothetical protein Csa_000259 [Cucumis sativus])

HSP 1 Score: 1488.0 bits (3851), Expect = 0.0e+00
Identity = 755/769 (98.18%), Postives = 760/769 (98.83%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGDKGRP+KKPKFGKEDYKKA FE+DDVYHLDD DDDDR GDKEGGKRDFSKLELKPD
Sbjct: 1   MGHGDKGRPNKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVIGRAR+  EDS GNGEFT+SKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 181 DEVIGRARVVHEDS-GNGEFTVSKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALD ARRS
Sbjct: 661 SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDAARRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769
            GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA
Sbjct: 721 KGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 768

[Close]
BLAST of Clc01G02660 vs. NCBI nr
Match: KAA0042740.1 (DNA repair helicase XPB1 [Cucumis melo var. makuwa])

HSP 1 Score: 1486.1 bits (3846), Expect = 0.0e+00
Identity = 757/769 (98.44%), Postives = 761/769 (98.96%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGD+GRPSKKPKFGKEDYKKA FE+DDVYHLDD DDDDRNGDKE GKRDFSKLELKPD
Sbjct: 1   MGHGDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVI RARI PEDS GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 181 DEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFK-VITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARR 720
           SFK VITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARR
Sbjct: 661 SFKVVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARR 720

Query: 721 SMGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           S+GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF
Sbjct: 721 SVGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768

[Close]
BLAST of Clc01G02660 vs. NCBI nr
Match: XP_022928981.1 (DNA repair helicase XPB1-like isoform X1 [Cucurbita moschata] >XP_022969990.1 DNA repair helicase XPB1-like [Cucurbita maxima] >XP_023550801.1 DNA repair helicase XPB1-like [Cucurbita pepo subsp. pepo] >KAG6579520.1 General transcription and DNA repair factor IIH helicase subunit XPB1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016980.1 DNA repair helicase XPB1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 744/769 (96.75%), Postives = 756/769 (98.31%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGDKGR SK+PKFGKEDYKKA FEE+D YH ++ DDDDRNGDKEGGKRDFSKLELKPD
Sbjct: 1   MGHGDKGRSSKRPKFGKEDYKKAHFEEEDAYHFEEFDDDDRNGDKEGGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWAC+DGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HTNRPLWACSDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LET+TIIAVLSKLSKAKLPKEMIDFIYAST+NYGKVKLVLKKNRYLVESPFPEVLQKLL+
Sbjct: 121 LETDTIIAVLSKLSKAKLPKEMIDFIYASTSNYGKVKLVLKKNRYLVESPFPEVLQKLLR 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVIGRARI  EDS GNGEFTISKTAGELG+RHEGLLNEAEAAAAAEERETHSFEIDP+Q
Sbjct: 181 DEVIGRARIIHEDSHGNGEFTISKTAGELGNRHEGLLNEAEAAAAAEERETHSFEIDPAQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHLERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDD DQIALDKARR 
Sbjct: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDTDQIALDKARRM 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769
            GSMSAMSGANGMVYMEYSTGRKLAGQGQ+KSKPKDPAKRHHLFKKRFA
Sbjct: 721 TGSMSAMSGANGMVYMEYSTGRKLAGQGQMKSKPKDPAKRHHLFKKRFA 769

[Close]
BLAST of Clc01G02660 vs. ExPASy Swiss-Prot
Match: Q38861 (General transcription and DNA repair factor IIH helicase subunit XPB1 OS=Arabidopsis thaliana OX=3702 GN=XPB1 PE=2 SV=3)

HSP 1 Score: 1312.7 bits (3396), Expect = 0.0e+00
Identity = 665/768 (86.59%), Postives = 713/768 (92.84%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKF-GKEDYKKAFEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MG+G++GRP+KK K+ GK+D K    ++   + DD D+D R+G+ E  KRDF+KLELKPD
Sbjct: 1   MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETII+VL+KLSK KLPKEMI+FI+ASTANYGKVKLVLKKNRY +ESPFPEVL++LL 
Sbjct: 121 LETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           D+VI RAR S E   G   F++ +T GEL +    LLNEAE AAAAEE+ETHSFEIDP+Q
Sbjct: 181 DDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEE+RNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VIS+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTS+DVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK +DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPP DAG+ LSYH  ++QL+LLGKV+NAGDD+VGLEQLE+D D +AL KARRS
Sbjct: 661 SFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           MGSMS MSG+ GMVYMEY++GR  +GQ Q K KPKDP KRH+LFKKR+
Sbjct: 721 MGSMSVMSGSKGMVYMEYNSGRHKSGQ-QFK-KPKDPTKRHNLFKKRY 766

[Close]
BLAST of Clc01G02660 vs. ExPASy Swiss-Prot
Match: Q9FUG4 (General transcription and DNA repair factor IIH helicase subunit XPB2 OS=Arabidopsis thaliana OX=3702 GN=XPB2 PE=2 SV=1)

HSP 1 Score: 1285.0 bits (3324), Expect = 0.0e+00
Identity = 652/768 (84.90%), Postives = 704/768 (91.67%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKF-GKEDYKKAFEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MG+ ++ RP+KK K+ GK+D K    ++   + DD D+D R+G+ E  +RDF+ LELKPD
Sbjct: 1   MGNDERKRPTKKMKYGGKDDQKMKNIQNVEDYYDDADEDSRDGEGEEKRRDFTDLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWACADG+IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETII+VL+KLSK KLP E+IDFI+ASTANYGKVKLVLKKNRY +ESPFPEVL++LL 
Sbjct: 121 LETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           D+VI RAR + E   G   FTI KT+GEL +    LLNEAE AAAAEE+ETHSFEIDP+ 
Sbjct: 181 DDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAL 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWA+QFKLWSTI+DDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEE+RNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VIS+TKSHCKLGLTATLVREDE+ITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTS+ VNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK +DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPP DAG+ L YH  ++QL+LLGKVLNAGDDMVGLEQLE+D D  AL K RRS
Sbjct: 661 SFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKAL-KTRRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           MGSMSAMSGANG VYMEY++GR+ +  G    KPKDP KRH++FKKR+
Sbjct: 721 MGSMSAMSGANGRVYMEYNSGRQKS--GNQSKKPKDPTKRHNIFKKRY 765

[Close]
BLAST of Clc01G02660 vs. ExPASy Swiss-Prot
Match: O00835 (General transcription and DNA repair factor IIH helicase subunit XPB OS=Dictyostelium discoideum OX=44689 GN=repB PE=2 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 1.1e-237
Identity = 455/760 (59.87%), Postives = 543/760 (71.45%), Query Frame = 0 

Query: 41  NGDKEGGKRDFSK-LELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRP 100
           + +++G   D+SK   LK D+ +RP+W C DG IFLETFS +YKQA DFL+AIAEPVCRP
Sbjct: 56  SSEEKGSLLDYSKRCILKQDNKSRPIWVCPDGHIFLETFSAIYKQASDFLVAIAEPVCRP 115

Query: 101 ESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVL 160
           +++HEY LTP+SLYAAVSVGLET  II VL +LSK  LPKE+  F+   T +YGKVKLVL
Sbjct: 116 QNIHEYQLTPYSLYAAVSVGLETNDIITVLGRLSKLALPKEVEQFVRQCTQSYGKVKLVL 175

Query: 161 KKNRYLVESPFPEVLQKLLKDEVIGRARISP--EDSRGNGE--FTISK---TAGELG--- 220
           +KN+Y VES +PEVL+ LLKD  I  ARI P  E+S  + +  F I+K   T  ++    
Sbjct: 176 QKNKYFVESAYPEVLEFLLKDSSIATARIKPTLEESVVDPKTGFIINKEVVTGAQISGGL 235

Query: 221 ----SRHEGLLNEAEAAAAAEERET---------HSFEIDPSQVENVKQRCLPNALNYPM 280
               S    L N+A +    EE E          HSFEIDP QVE VK+RC+   L+YP+
Sbjct: 236 QANQSLDPVLKNDALSNLLEEEEEDTVNNSDQHFHSFEIDPQQVEEVKKRCI--QLDYPV 295

Query: 281 LEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGV 340
           LEEYDFRNDT+NP+L+++LKP    RPYQEKSLSKMFGNGRARSGIIVLPCGAGKSL G+
Sbjct: 296 LEEYDFRNDTVNPNLNIDLKPTTMIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLSGI 355

Query: 341 SAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTY 400
           +AA  ++KS L L T+AVSV+QW +QFKLWS I + QI +FTSD+KE+    AGV +TTY
Sbjct: 356 TAACTVKKSILVLCTSAVSVEQWKYQFKLWSNIEERQISKFTSDNKEKISNVAGVTITTY 415

Query: 401 NMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATL 460
            MVAFGG+RS ES KI+ EI NREWGL+L+DEVHVVPA MFRKV+++TK+HCKLGLTATL
Sbjct: 416 TMVAFGGRRSAESLKIMNEITNREWGLVLLDEVHVVPAAMFRKVLTVTKAHCKLGLTATL 475

Query: 461 VREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKK 520
           +REDE+I DLNFLIGPKLYEANWLDL K GF+ANV C+EVWCPMT EF+ EYL  ++  K
Sbjct: 476 LREDEKIQDLNFLIGPKLYEANWLDLQKAGFLANVSCSEVWCPMTAEFYKEYLINDSQGK 535

Query: 521 KQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIE 580
           K+ LY MNPNKFRACE+LIRFHE QRGDKIIVF+DN++AL +YA  L +  IYG TS  E
Sbjct: 536 KKLLYTMNPNKFRACEYLIRFHE-QRGDKIIVFSDNVYALQKYAKGLGRYFIYGPTSGHE 595

Query: 581 RTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG 640
           R  IL  F+    V T+F+SKVGD SIDIPEA VIIQ+SSH GSRRQEAQRLGRILR K 
Sbjct: 596 RMSILSKFQHDPTVRTIFISKVGDTSIDIPEATVIIQVSSHYGSRRQEAQRLGRILRPKP 655

Query: 641 KHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGADL 700
           K           YNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFKVI+ LP  D   +L
Sbjct: 656 KSDGL-------YNAFFYSLVSKDTQEMYYSTKRQQFLIDQGYSFKVISELPGIDQEVNL 715

Query: 701 SYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQI----------ALDKARRSMGSMSAM 760
            Y    DQL LL +VL  G+D    E LE+D D I          A   +R + GS  A+
Sbjct: 716 KYSSKQDQLDLLAQVLGEGEDSGKNEILEEDFDDITRGAKKSKSSAPTVSRTTGGSTRAL 775

Query: 761 SGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 767
           SG N M YMEY          Q  +  K    +H LFK+R
Sbjct: 776 SGGNDMNYMEY----------QAPAIYKSIPTQHALFKQR 795

[Close]
BLAST of Clc01G02660 vs. ExPASy Swiss-Prot
Match: P49135 (General transcription and DNA repair factor IIH helicase subunit XPB OS=Mus musculus OX=10090 GN=Ercc3 PE=2 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 1.4e-216
Identity = 422/804 (52.49%), Postives = 541/804 (67.29%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKAFEEDDVYHLD-----------DLDDDDRNGDKEGGKR 60
           MG  D+    KK    ++  ++  +EDD+   +            +D+     D+ G K 
Sbjct: 1   MGKRDRVDRDKKKSKKRQYEEEEEDEDDIPGNESQEAVPSAAGKQVDESSTKVDEYGAKD 60

Query: 61  DFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTP 120
              ++ LK DH +RPLW   DG IFLE FSP+YK A DFL+AIAEPVCRP  +HEY LT 
Sbjct: 61  YRQQMPLKGDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA 120

Query: 121 HSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESP 180
           +SLYAAVSVGL+T  I   L KLSK  +P  +I FI   T +YGKVKLVLK NRY VES 
Sbjct: 121 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS 180

Query: 181 FPEVLQKLLKDEVIGRARISPEDSRGNGEFT--------ISKTAGELGSRHEGLLNEAEA 240
            P+V+Q LL+D VI   R+   +       T        ISKTA E GS         +A
Sbjct: 181 HPDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAAE-GSGGPSTSQGVDA 240

Query: 241 AAAA--------------------EERETHSFEIDPSQVENVKQRCLPNALNYPMLEEYD 300
            A +                    EE +T SFE+    +E +++RC+   L YP+L EYD
Sbjct: 241 QATSDIPKDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCI--CLEYPLLAEYD 300

Query: 301 FRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 360
           FRNDT+NPD++++LKP A  RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+AA  
Sbjct: 301 FRNDTLNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACT 360

Query: 361 IRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAF 420
           +RK CL L  +AVSV+QW  QFK+WSTI D QICRFTSD+K++  G   V ++TY+M+  
Sbjct: 361 VRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIG-CSVAISTYSMLGH 420

Query: 421 GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDE 480
             KRS E+E+++E ++ +EWGL+++DEVH +PA MFR+V+++ ++HCKLGLTATLVRED+
Sbjct: 421 TTKRSWEAERVMEWLKTQEWGLMILDEVHTIPARMFRRVLTIVQAHCKLGLTATLVREDD 480

Query: 481 RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALY 540
           +I DLNFLIGPKLYEANW++L   G+IA VQCAEVWCPM+ EF+ EY+  + +KK+  LY
Sbjct: 481 KIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIK-TKKRILLY 540

Query: 541 VMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKIL 600
            MNPNKFRAC+FLI+FHE +R DKIIVFADN+FAL EYA++L KP IYG TS  ER +IL
Sbjct: 541 TMNPNKFRACQFLIKFHE-RRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQIL 600

Query: 601 EAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDR 660
           + FK +  +NT+F+SKVGD S D+PEANV+IQISSH GSRRQEAQRLGR+LRAK   +  
Sbjct: 601 QNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAK---KGM 660

Query: 661 MAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGADLSYHRL 720
           +A   EEYNAFFYSLVS DTQEM YSTKRQ+FL+DQGYSFKVIT L   +   +L++   
Sbjct: 661 VA---EEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EELAFSTK 720

Query: 721 DDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRSMGSMSAMSGANGMVYMEYSTGR 766
           ++Q  LL KVL A  D+   E++          +A R  G+MS++SGA+  VYMEY + R
Sbjct: 721 EEQQQLLQKVL-AATDLDAEEEVVAGEFGSRSGQASRRCGTMSSLSGADDTVYMEYHSSR 780

[Close]
BLAST of Clc01G02660 vs. ExPASy Swiss-Prot
Match: Q7ZVV1 (General transcription and DNA repair factor IIH helicase subunit XPB OS=Danio rerio OX=7955 GN=ercc3 PE=2 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 2.4e-216
Identity = 425/806 (52.73%), Postives = 547/806 (67.87%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKAFEEDDVYHLD-----------DLDDDDRNGDKEGGKR 60
           MG  DK    KK K  K  Y+   E+++V   +            +D+     D+ G K 
Sbjct: 1   MGRKDKSDREKKSK--KRYYEDEEEDEEVIGGESQEAVPAAAGKQVDESSTKLDEYGAKD 60

Query: 61  DFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTP 120
              ++ LK DH++RPLW   DG IFLE FSP+YK A DFL+AI+EPVCRP   HEY LT 
Sbjct: 61  YRLQMLLKNDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAISEPVCRPTHAHEYKLTA 120

Query: 121 HSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESP 180
           +SLYAAVSVGL+T  II  L KLSK  +P  ++ FI   T +YGKVKLVLK NRY VES 
Sbjct: 121 YSLYAAVSVGLQTSDIIEYLQKLSKTSVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESA 180

Query: 181 FPEVLQKLLKDEVIGRARI-----------------------SPEDSRG-------NGEF 240
           FP+V+Q+LL+D VI   R+                       S +D+ G       +G+ 
Sbjct: 181 FPDVIQRLLQDTVIRDCRLRSAEGEETELITETISSKSAISKSQQDNGGPSSSQPADGQR 240

Query: 241 TISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQVENVKQRCLPNALNYPMLEE 300
           + ++   ++ S +E +  E E     EE +T SFEI    +E +++RC+   L YP+L E
Sbjct: 241 SGTQVPEDIFSYYEQMDKEEE---EEEETQTVSFEIRQEMIEELQKRCI--QLEYPLLAE 300

Query: 301 YDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 360
           YDFRNDT+NPD++M+LKP A  RPYQEKSL KMFGNGRARSG+IVLPCGAGKSLVGV+AA
Sbjct: 301 YDFRNDTVNPDINMDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA 360

Query: 361 SRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMV 420
             +RK CL L  ++VSV+QW  QFK+WSTI D QICRFTSD+K++  G   V ++TY+M+
Sbjct: 361 CTVRKRCLVLGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIG-CSVAISTYSML 420

Query: 421 AFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRE 480
               KRS E+E+++E ++++EWGL+++DEVH +PA MFR+V+++ ++HCKLGLTATLVRE
Sbjct: 421 GHTTKRSWEAERVMEWMKSQEWGLIILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVRE 480

Query: 481 DERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQA 540
           D++I DLNFLIGPKLYEANW++L   G+IA VQCAEVWCPM+ EF+ EY+  + +KK+  
Sbjct: 481 DDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIK-TKKRIL 540

Query: 541 LYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTK 600
           LY MNPNKFRAC+FLIRFHE +R DKIIVFADN+FAL EYA++L KP IYG TS  ER +
Sbjct: 541 LYTMNPNKFRACQFLIRFHE-RRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQ 600

Query: 601 ILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQ 660
           IL+ FK +  +NT+F+SKVGD S D+PEANV+IQISSH GSRRQEAQRLGR+LRAK   +
Sbjct: 601 ILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAK---K 660

Query: 661 DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGADLSYH 720
             +A   EEYNA+FYSLVS DTQEM YSTKRQ+FL+DQGYSFKVIT L   +   DL + 
Sbjct: 661 GMVA---EEYNAYFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EDLMFS 720

Query: 721 RLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRSMGSMSAMSGANGMVYMEYST 766
             D+Q  LL KVL A D  +  E+     +     +  R  G+MS+MSGA+  +YMEY  
Sbjct: 721 TRDEQQQLLQKVLAASD--LDAEEEVVMGEVGGKPQFSRRAGTMSSMSGADDALYMEYQM 779

[Close]
BLAST of Clc01G02660 vs. ExPASy TrEMBL
Match: A0A1S3ATU9 (DNA helicase OS=Cucumis melo OX=3656 GN=LOC103482768 PE=3 SV=1)

HSP 1 Score: 1490.7 bits (3858), Expect = 0.0e+00
Identity = 757/768 (98.57%), Postives = 761/768 (99.09%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGD+GRPSKKPKFGKEDYKKA FE+DDVYHLDD DDDDRNGDKE GKRDFSKLELKPD
Sbjct: 1   MGHGDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVI RARI PEDS GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 181 DEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS
Sbjct: 661 SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           +GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF
Sbjct: 721 VGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 767

[Close]
BLAST of Clc01G02660 vs. ExPASy TrEMBL
Match: A0A0A0KKI0 (DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_5G152930 PE=3 SV=1)

HSP 1 Score: 1488.0 bits (3851), Expect = 0.0e+00
Identity = 755/769 (98.18%), Postives = 760/769 (98.83%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGDKGRP+KKPKFGKEDYKKA FE+DDVYHLDD DDDDR GDKEGGKRDFSKLELKPD
Sbjct: 54  MGHGDKGRPNKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPD 113

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 114 HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 173

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 174 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 233

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVIGRAR+  EDS GNGEFT+SKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 234 DEVIGRARVVHEDS-GNGEFTVSKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 293

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 294 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 353

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 354 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 413

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 414 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 473

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 474 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 533

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 534 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 593

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 594 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 653

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 654 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 713

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALD ARRS
Sbjct: 714 SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDAARRS 773

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769
            GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA
Sbjct: 774 KGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 821

[Close]
BLAST of Clc01G02660 vs. ExPASy TrEMBL
Match: A0A5A7THB1 (DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002390 PE=3 SV=1)

HSP 1 Score: 1486.1 bits (3846), Expect = 0.0e+00
Identity = 757/769 (98.44%), Postives = 761/769 (98.96%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGD+GRPSKKPKFGKEDYKKA FE+DDVYHLDD DDDDRNGDKE GKRDFSKLELKPD
Sbjct: 1   MGHGDRGRPSKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRNGDKEVGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETIIAVLSKLSKAKLPKEMIDFIYAST NYGKVKLVLKKNRYLVESPFPEVLQKLLK
Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVI RARI PEDS GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ
Sbjct: 181 DEVISRARIIPEDS-GNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFK-VITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARR 720
           SFK VITSLPPADAGA+LSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARR
Sbjct: 661 SFKVVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARR 720

Query: 721 SMGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           S+GSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF
Sbjct: 721 SVGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768

[Close]
BLAST of Clc01G02660 vs. ExPASy TrEMBL
Match: A0A6J1I1I0 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111469016 PE=3 SV=1)

HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 744/769 (96.75%), Postives = 756/769 (98.31%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGDKGR SK+PKFGKEDYKKA FEE+D YH ++ DDDDRNGDKEGGKRDFSKLELKPD
Sbjct: 1   MGHGDKGRSSKRPKFGKEDYKKAHFEEEDAYHFEEFDDDDRNGDKEGGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWAC+DGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HTNRPLWACSDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LET+TIIAVLSKLSKAKLPKEMIDFIYAST+NYGKVKLVLKKNRYLVESPFPEVLQKLL+
Sbjct: 121 LETDTIIAVLSKLSKAKLPKEMIDFIYASTSNYGKVKLVLKKNRYLVESPFPEVLQKLLR 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVIGRARI  EDS GNGEFTISKTAGELG+RHEGLLNEAEAAAAAEERETHSFEIDP+Q
Sbjct: 181 DEVIGRARIIHEDSHGNGEFTISKTAGELGNRHEGLLNEAEAAAAAEERETHSFEIDPAQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHLERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDD DQIALDKARR 
Sbjct: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDTDQIALDKARRM 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769
            GSMSAMSGANGMVYMEYSTGRKLAGQGQ+KSKPKDPAKRHHLFKKRFA
Sbjct: 721 TGSMSAMSGANGMVYMEYSTGRKLAGQGQMKSKPKDPAKRHHLFKKRFA 769

[Close]
BLAST of Clc01G02660 vs. ExPASy TrEMBL
Match: A0A6J1ELT7 (DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435717 PE=3 SV=1)

HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 744/769 (96.75%), Postives = 756/769 (98.31%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKFGKEDYKKA-FEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MGHGDKGR SK+PKFGKEDYKKA FEE+D YH ++ DDDDRNGDKEGGKRDFSKLELKPD
Sbjct: 1   MGHGDKGRSSKRPKFGKEDYKKAHFEEEDAYHFEEFDDDDRNGDKEGGKRDFSKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWAC+DGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HTNRPLWACSDGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LET+TIIAVLSKLSKAKLPKEMIDFIYAST+NYGKVKLVLKKNRYLVESPFPEVLQKLL+
Sbjct: 121 LETDTIIAVLSKLSKAKLPKEMIDFIYASTSNYGKVKLVLKKNRYLVESPFPEVLQKLLR 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           DEVIGRARI  EDS GNGEFTISKTAGELG+RHEGLLNEAEAAAAAEERETHSFEIDP+Q
Sbjct: 181 DEVIGRARIIHEDSHGNGEFTISKTAGELGNRHEGLLNEAEAAAAAEERETHSFEIDPAQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSH+ERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHLERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDD DQIALDKARR 
Sbjct: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDTDQIALDKARRM 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRFA 769
            GSMSAMSGANGMVYMEYSTGRKLAGQGQ+KSKPKDPAKRHHLFKKRFA
Sbjct: 721 TGSMSAMSGANGMVYMEYSTGRKLAGQGQMKSKPKDPAKRHHLFKKRFA 769

[Close]
BLAST of Clc01G02660 vs. TAIR 10
Match: AT5G41370.1 (homolog of xeroderma pigmentosum complementation group B 1 )

HSP 1 Score: 1312.7 bits (3396), Expect = 0.0e+00
Identity = 665/768 (86.59%), Postives = 713/768 (92.84%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKF-GKEDYKKAFEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MG+G++GRP+KK K+ GK+D K    ++   + DD D+D R+G+ E  KRDF+KLELKPD
Sbjct: 1   MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYYDDADEDSRDGEGEEKKRDFTKLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETII+VL+KLSK KLPKEMI+FI+ASTANYGKVKLVLKKNRY +ESPFPEVL++LL 
Sbjct: 121 LETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           D+VI RAR S E   G   F++ +T GEL +    LLNEAE AAAAEE+ETHSFEIDP+Q
Sbjct: 181 DDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQ 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEE+RNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VIS+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTS+DVNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK +DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPP DAG+ LSYH  ++QL+LLGKV+NAGDD+VGLEQLE+D D +AL KARRS
Sbjct: 661 SFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           MGSMS MSG+ GMVYMEY++GR  +GQ Q K KPKDP KRH+LFKKR+
Sbjct: 721 MGSMSVMSGSKGMVYMEYNSGRHKSGQ-QFK-KPKDPTKRHNLFKKRY 766

[Close]
BLAST of Clc01G02660 vs. TAIR 10
Match: AT5G41360.1 (homolog of Xeroderma pigmentosum complementation group B 2 )

HSP 1 Score: 1285.0 bits (3324), Expect = 0.0e+00
Identity = 652/768 (84.90%), Postives = 704/768 (91.67%), Query Frame = 0 

Query: 1   MGHGDKGRPSKKPKF-GKEDYKKAFEEDDVYHLDDLDDDDRNGDKEGGKRDFSKLELKPD 60
           MG+ ++ RP+KK K+ GK+D K    ++   + DD D+D R+G+ E  +RDF+ LELKPD
Sbjct: 1   MGNDERKRPTKKMKYGGKDDQKMKNIQNVEDYYDDADEDSRDGEGEEKRRDFTDLELKPD 60

Query: 61  HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120
           H NRPLWACADG+IFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
Sbjct: 61  HGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120

Query: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTANYGKVKLVLKKNRYLVESPFPEVLQKLLK 180
           LETETII+VL+KLSK KLP E+IDFI+ASTANYGKVKLVLKKNRY +ESPFPEVL++LL 
Sbjct: 121 LETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS 180

Query: 181 DEVIGRARISPEDSRGNGEFTISKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 240
           D+VI RAR + E   G   FTI KT+GEL +    LLNEAE AAAAEE+ETHSFEIDP+ 
Sbjct: 181 DDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAL 240

Query: 241 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 300
           VENVKQRCLPNALNYPMLEEYDFRND +NPDLDMELKP AQPRPYQEKSLSKMFGNGRAR
Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300

Query: 301 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 360
           SGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWA+QFKLWSTI+DDQICRFTS
Sbjct: 301 SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTS 360

Query: 361 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 420
           DSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIEE+RNREWGLLLMDEVHVVPAHMFRK
Sbjct: 361 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420

Query: 421 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480
           VIS+TKSHCKLGLTATLVREDE+ITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
Sbjct: 421 VISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480

Query: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540
           MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540

Query: 541 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600
           AMKLRKPMIYGATSHIERTKILEAFKTS+ VNTVFLSKVGDNSIDIPEANVIIQISSHAG
Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600

Query: 601 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660
           SRRQEAQRLGRILRAKGK +DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
Sbjct: 601 SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660

Query: 661 SFKVITSLPPADAGADLSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDKARRS 720
           SFKVITSLPP DAG+ L YH  ++QL+LLGKVLNAGDDMVGLEQLE+D D  AL K RRS
Sbjct: 661 SFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKAL-KTRRS 720

Query: 721 MGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 768
           MGSMSAMSGANG VYMEY++GR+ +  G    KPKDP KRH++FKKR+
Sbjct: 721 MGSMSAMSGANGRVYMEYNSGRQKS--GNQSKKPKDPTKRHNIFKKRY 765

The following BLAST results are available for this feature:
BLAST of Clc01G02660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038874425.10.0e+0099.09general transcription and DNA repair factor IIH helicase subunit XPB1 [Benincasa... [more]
XP_008437310.10.0e+0098.57PREDICTED: DNA repair helicase XPB1 [Cucumis melo][more]
XP_011654733.10.0e+0098.18general transcription and DNA repair factor IIH helicase subunit XPB1 [Cucumis s... [more]
KAA0042740.10.0e+0098.44DNA repair helicase XPB1 [Cucumis melo var. makuwa][more]
XP_022928981.10.0e+0096.75DNA repair helicase XPB1-like isoform X1 [Cucurbita moschata] >XP_022969990.1 DN... [more]
BLAST of Clc01G02660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q388610.0e+0086.59General transcription and DNA repair factor IIH helicase subunit XPB1 OS=Arabido... [more]
Q9FUG40.0e+0084.90General transcription and DNA repair factor IIH helicase subunit XPB2 OS=Arabido... [more]
O008351.1e-23759.87General transcription and DNA repair factor IIH helicase subunit XPB OS=Dictyost... [more]
P491351.4e-21652.49General transcription and DNA repair factor IIH helicase subunit XPB OS=Mus musc... [more]
Q7ZVV12.4e-21652.73General transcription and DNA repair factor IIH helicase subunit XPB OS=Danio re... [more]
BLAST of Clc01G02660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3ATU90.0e+0098.57DNA helicase OS=Cucumis melo OX=3656 GN=LOC103482768 PE=3 SV=1[more]
A0A0A0KKI00.0e+0098.18DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_5G152930 PE=3 SV=1[more]
A0A5A7THB10.0e+0098.44DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002390 P... [more]
A0A6J1I1I00.0e+0096.75DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111469016 PE=3 SV=1[more]
A0A6J1ELT70.0e+0096.75DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111435717 PE=3 SV=1[more]
BLAST of Clc01G02660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G41370.10.0e+0086.59homolog of xeroderma pigmentosum complementation group B 1 [more]
AT5G41360.10.0e+0084.90homolog of Xeroderma pigmentosum complementation group B 2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00851XRODRMPGMNTBcoord: 590..615
score: 90.38
coord: 466..488
score: 79.35
coord: 524..546
score: 72.28
coord: 63..83
score: 67.26
coord: 149..168
score: 77.5
coord: 262..288
score: 72.69
coord: 293..315
score: 95.65
coord: 504..519
score: 82.81
coord: 627..650
score: 88.02
coord: 571..589
score: 78.29
coord: 718..737
score: 59.38
coord: 400..420
score: 73.81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..768
NoneNo IPR availablePANTHERPTHR11274:SF17DNA REPAIR HELICASE XPB1-LIKEcoord: 4..767
NoneNo IPR availablePANTHERPTHR11274RAD25/XP-B DNA REPAIR HELICASEcoord: 4..767
NoneNo IPR availableCDDcd18029DEXHc_XPBcoord: 273..442
e-value: 7.30743E-101
score: 306.15
NoneNo IPR availableCDDcd18789SF2_C_XPBcoord: 473..637
e-value: 8.28743E-84
score: 261.03
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 277..458
e-value: 9.5E-20
score: 81.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 292..454
score: 17.890491
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 537..615
e-value: 3.0E-9
score: 46.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 509..675
score: 11.903161
IPR032438ERCC3/RAD25/XPB helicase, C-terminal domainPFAMPF16203ERCC3_RAD25_Ccoord: 462..710
e-value: 7.2E-116
score: 385.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 463..703
e-value: 5.5E-66
score: 224.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 271..462
e-value: 2.9E-36
score: 126.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 390..705
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 240..456
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 280..436
e-value: 2.8E-14
score: 53.5
IPR032830Helicase XPB/Ssl2, N-terminal domainPFAMPF13625Helicase_C_3coord: 65..187
e-value: 2.8E-32
score: 111.5
IPR001161Helicase XPB/Ssl2TIGRFAMTIGR00603TIGR00603coord: 50..765
e-value: 0.0
score: 1203.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G02660.1Clc01G02660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0033683 nucleotide-excision repair, DNA incision
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0006289 nucleotide-excision repair
cellular_component GO:0000112 nucleotide-excision repair factor 3 complex
cellular_component GO:0005675 transcription factor TFIIH holo complex
cellular_component GO:0097550 transcription preinitiation complex
molecular_function GO:0043138 3'-5' DNA helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0016787 hydrolase activity