Clc01G02110 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G02110
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Epimerase domain-containing protein
Location	ClcChr01: 1855872 .. 1856651 (-)
RNA-Seq Expression	Clc01G02110
Synteny	Clc01G02110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAATTAAAAAAAGAGGGGGTGAGAATAATAATAAATTGGAAAAAAGAGGGAAGAGAAGAAGGGGCTTAGTGGAGAAGTCAATGATGCCCTTGAAAATAAATAAGTGCAGAGAAAAGACTTTGTAAAAGAAATCCATTTTCTGATCGTCTACCCAAACCCAACGCGTTTCTTTCTCCGCCCGTCATTAAAACCACTTCCTCTGTTTCTTCTTCTTCTTCTTCCTCACCGGCAAAAATGGCGAGCCCTAAATTCAGCAAATCCAAATCCTCTCAATCCGCCGTCGTTTGGGACTGTGGAAGCTCCCTTTACGATTCCTTCGAACTCAATTCCCTCAAACGCCAACTCGATTCCGCTATTGCTTCAAGAACCCTGTCCATGCCTCATCTCCCTACCCGCCGCTGCCTTCTTCCTCCTCCTCCTCCACTGCCGCCCTCCAAAAAGCCCTCCAAGATTTCCAGGTCTCTGCACAAATTTCTCCGGTCGGTCTTCGGGCACAAGCCGAATTCGAGCCCTACCTTCGAAGCTAATCCGGAACGAGTCGATGCTGGATTCTACGTTCTGTACGAAGATGAGCCGAATTCAGTTTCTGCGGTTCCGGAGGTTGGATTCGCCGGAATTTCGCCCGAAATTGGCTCTTTGGTTCGCCGGACTGCGTCCGAGAGATTCACGGGGGCCACTTCTATGGGTATTTCTTGTGCTTGAAGGAGCCTTCTTAGAATATGTAAATTAGTTAAGTTTCTTACAAATAATTTTTAACAATTATAACCTCTTTTTTTT

mRNA sequence

TGTAAATTAAAAAAAGAGGGGGTGAGAATAATAATAAATTGGAAAAAAGAGGGAAGAGAAGAAGGGGCTTAGTGGAGAAGTCAATGATGCCCTTGAAAATAAATAAGTGCAGAGAAAAGACTTTGTAAAAGAAATCCATTTTCTGATCGTCTACCCAAACCCAACGCGTTTCTTTCTCCGCCCGTCATTAAAACCACTTCCTCTGTTTCTTCTTCTTCTTCTTCCTCACCGGCAAAAATGGCGAGCCCTAAATTCAGCAAATCCAAATCCTCTCAATCCGCCGTCGTTTGGGACTGTGGAAGCTCCCTTTACGATTCCTTCGAACTCAATTCCCTCAAACGCCAACTCGATTCCGCTATTGCTTCAAGAACCCTGTCCATGCCTCATCTCCCTACCCGCCGCTGCCTTCTTCCTCCTCCTCCTCCACTGCCGCCCTCCAAAAAGCCCTCCAAGATTTCCAGGTCTCTGCACAAATTTCTCCGGTCGGTCTTCGGGCACAAGCCGAATTCGAGCCCTACCTTCGAAGCTAATCCGGAACGAGTCGATGCTGGATTCTACGTTCTGTACGAAGATGAGCCGAATTCAGTTTCTGCGGTTCCGGAGGTTGGATTCGCCGGAATTTCGCCCGAAATTGGCTCTTTGGTTCGCCGGACTGCGTCCGAGAGATTCACGGGGGCCACTTCTATGGGTATTTCTTGTGCTTGAAGGAGCCTTCTTAGAATATGTAAATTAGTTAAGTTTCTTACAAATAATTTTTAACAATTATAACCTCTTTTTTTT

Coding sequence (CDS)

ATGGCGAGCCCTAAATTCAGCAAATCCAAATCCTCTCAATCCGCCGTCGTTTGGGACTGTGGAAGCTCCCTTTACGATTCCTTCGAACTCAATTCCCTCAAACGCCAACTCGATTCCGCTATTGCTTCAAGAACCCTGTCCATGCCTCATCTCCCTACCCGCCGCTGCCTTCTTCCTCCTCCTCCTCCACTGCCGCCCTCCAAAAAGCCCTCCAAGATTTCCAGGTCTCTGCACAAATTTCTCCGGTCGGTCTTCGGGCACAAGCCGAATTCGAGCCCTACCTTCGAAGCTAATCCGGAACGAGTCGATGCTGGATTCTACGTTCTGTACGAAGATGAGCCGAATTCAGTTTCTGCGGTTCCGGAGGTTGGATTCGCCGGAATTTCGCCCGAAATTGGCTCTTTGGTTCGCCGGACTGCGTCCGAGAGATTCACGGGGGCCACTTCTATGGGTATTTCTTGTGCTTGA

Protein sequence

MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLLPPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYVLYEDEPNSVSAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA

Homology

[Close]

BLAST of Clc01G02110 vs. NCBI nr
Match: XP_038875345.1 (uncharacterized protein LOC120067824 [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 5.3e-67
Identity = 138/157 (87.90%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLL-- 60
           MASPKF+KSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLP RRCLL  
Sbjct: 1   MASPKFNKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRRCLLPS 60

Query: 61  PPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYVLYEDEPNSVS 120
           PPPPP PPSK+PSKISRSLHKFLRSVF HKPNSSP+F  NPER+D+GFYVLYEDE NS+S
Sbjct: 61  PPPPPPPPSKRPSKISRSLHKFLRSVFRHKPNSSPSF--NPERLDSGFYVLYEDEANSLS 120

Query: 121 AVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
            +PEVGFAG SPEI SLVRRTASERFT ATSMGISCA
Sbjct: 121 KIPEVGFAGFSPEIASLVRRTASERFTAATSMGISCA 155

[Close]

BLAST of Clc01G02110 vs. NCBI nr
Match: XP_022929008.1 (uncharacterized protein LOC111435738 [Cucurbita moschata] >XP_023551387.1 uncharacterized protein LOC111809224 [Cucurbita pepo subsp. pepo] >KAG6579550.1 hypothetical protein SDJN03_23998, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017009.1 hypothetical protein SDJN02_22120, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66
Identity = 134/155 (86.45%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLLPP 60
           MASPKF+KSKSSQSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLP RRC LPP
Sbjct: 1   MASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRC-LPP 60

Query: 61  PPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYVLYEDEPNSVSAV 120
           PPPLPPSK+PSKISRSLHKFLRSVF HKPNSSP+ EANPER DAG+YVLY D+ + +SA 
Sbjct: 61  PPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSAN 120

Query: 121 PEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           PEVGF G SPEIGSLVRRTASERFT ATSMGISCA
Sbjct: 121 PEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA 154

[Close]

BLAST of Clc01G02110 vs. NCBI nr
Match: XP_008437381.1 (PREDICTED: uncharacterized protein LOC103482814 [Cucumis melo] >KAA0042691.1 putative inactive serine/threonine-protein kinase slob1 isoform X1 [Cucumis melo var. makuwa] >TYK06094.1 putative inactive serine/threonine-protein kinase slob1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.5e-64
Identity = 135/158 (85.44%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLL-- 60
           MA+P F+KSKS+QSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLP RRCLL  
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRRCLLPP 60

Query: 61  PPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSP-TFEANPERVDAGFYVLYEDEPNSV 120
           PPPPP PPSK+ SKISRSLHKFLRSVF HK NS P +FEANPERVD GFYVLYEDE NS+
Sbjct: 61  PPPPPPPPSKRSSKISRSLHKFLRSVFRHKTNSIPGSFEANPERVDEGFYVLYEDESNSL 120

Query: 121 SAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           SAVPEVGF G SPEIGSLVRRT SERFT ATSM ISCA
Sbjct: 121 SAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 158

[Close]

BLAST of Clc01G02110 vs. NCBI nr
Match: XP_022970102.1 (uncharacterized protein LOC111469095 [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 7.2e-64
Identity = 131/155 (84.52%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLLPP 60
           MASPK +KSKSSQSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLP RRC LPP
Sbjct: 42  MASPKLNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRC-LPP 101

Query: 61  PPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYVLYEDEPNSVSAV 120
           PPPLPPSK+PSKISRSLHKFLRSVF HKPNSSP+ EANPER DAG+YVLY D+ + +SA 
Sbjct: 102 PPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSAN 161

Query: 121 PEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           P+VGF   SPEIGSLVRRTASERFT ATSMGISCA
Sbjct: 162 PKVGFPEFSPEIGSLVRRTASERFTAATSMGISCA 195

[Close]

BLAST of Clc01G02110 vs. NCBI nr
Match: XP_011654703.1 (uncharacterized protein LOC105435436 [Cucumis sativus] >KGN50029.1 hypothetical protein Csa_000541 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 134/161 (83.23%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLL-- 60
           MA+P F+KSKS+QSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLP R C L  
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRLCTLLP 60

Query: 61  -PPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSP-TFEANPERV--DAGFYVLYEDEP 120
            PPPPP PPSK+ SKISRSLHKFLRSVF HK NS P TFEANPERV  D GFYVLYEDE 
Sbjct: 61  PPPPPPPPPSKRSSKISRSLHKFLRSVFKHKTNSIPGTFEANPERVDDDHGFYVLYEDEA 120

Query: 121 NSVSAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           NS+SAVPEVGF G SPEIGSLVRRT SERFT ATSM ISCA
Sbjct: 121 NSLSAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 161

[Close]

BLAST of Clc01G02110 vs. ExPASy TrEMBL
Match: A0A6J1EQS3 (uncharacterized protein LOC111435738 OS=Cucurbita moschata OX=3662 GN=LOC111435738 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 134/155 (86.45%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLLPP 60
           MASPKF+KSKSSQSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLP RRC LPP
Sbjct: 1   MASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRC-LPP 60

Query: 61  PPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYVLYEDEPNSVSAV 120
           PPPLPPSK+PSKISRSLHKFLRSVF HKPNSSP+ EANPER DAG+YVLY D+ + +SA 
Sbjct: 61  PPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSAN 120

Query: 121 PEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           PEVGF G SPEIGSLVRRTASERFT ATSMGISCA
Sbjct: 121 PEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA 154

[Close]

BLAST of Clc01G02110 vs. ExPASy TrEMBL
Match: A0A5D3C469 (Putative inactive serine/threonine-protein kinase slob1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001950 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 135/158 (85.44%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLL-- 60
           MA+P F+KSKS+QSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLP RRCLL  
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRRCLLPP 60

Query: 61  PPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSP-TFEANPERVDAGFYVLYEDEPNSV 120
           PPPPP PPSK+ SKISRSLHKFLRSVF HK NS P +FEANPERVD GFYVLYEDE NS+
Sbjct: 61  PPPPPPPPSKRSSKISRSLHKFLRSVFRHKTNSIPGSFEANPERVDEGFYVLYEDESNSL 120

Query: 121 SAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           SAVPEVGF G SPEIGSLVRRT SERFT ATSM ISCA
Sbjct: 121 SAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 158

[Close]

BLAST of Clc01G02110 vs. ExPASy TrEMBL
Match: A0A1S3AU09 (uncharacterized protein LOC103482814 OS=Cucumis melo OX=3656 GN=LOC103482814 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 135/158 (85.44%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLL-- 60
           MA+P F+KSKS+QSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLP RRCLL  
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRRCLLPP 60

Query: 61  PPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSP-TFEANPERVDAGFYVLYEDEPNSV 120
           PPPPP PPSK+ SKISRSLHKFLRSVF HK NS P +FEANPERVD GFYVLYEDE NS+
Sbjct: 61  PPPPPPPPSKRSSKISRSLHKFLRSVFRHKTNSIPGSFEANPERVDEGFYVLYEDESNSL 120

Query: 121 SAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           SAVPEVGF G SPEIGSLVRRT SERFT ATSM ISCA
Sbjct: 121 SAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 158

[Close]

BLAST of Clc01G02110 vs. ExPASy TrEMBL
Match: A0A6J1HY70 (uncharacterized protein LOC111469095 OS=Cucurbita maxima OX=3661 GN=LOC111469095 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.5e-64
Identity = 131/155 (84.52%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLLPP 60
           MASPK +KSKSSQSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLP RRC LPP
Sbjct: 42  MASPKLNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRC-LPP 101

Query: 61  PPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYVLYEDEPNSVSAV 120
           PPPLPPSK+PSKISRSLHKFLRSVF HKPNSSP+ EANPER DAG+YVLY D+ + +SA 
Sbjct: 102 PPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSAN 161

Query: 121 PEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           P+VGF   SPEIGSLVRRTASERFT ATSMGISCA
Sbjct: 162 PKVGFPEFSPEIGSLVRRTASERFTAATSMGISCA 195

[Close]

BLAST of Clc01G02110 vs. ExPASy TrEMBL
Match: A0A0A0KMF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150470 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 134/161 (83.23%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MASPKFSKSKSSQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPTRRCLL-- 60
           MA+P F+KSKS+QSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLP R C L  
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRLCTLLP 60

Query: 61  -PPPPPLPPSKKPSKISRSLHKFLRSVFGHKPNSSP-TFEANPERV--DAGFYVLYEDEP 120
            PPPPP PPSK+ SKISRSLHKFLRSVF HK NS P TFEANPERV  D GFYVLYEDE 
Sbjct: 61  PPPPPPPPPSKRSSKISRSLHKFLRSVFKHKTNSIPGTFEANPERVDDDHGFYVLYEDEA 120

Query: 121 NSVSAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
           NS+SAVPEVGF G SPEIGSLVRRT SERFT ATSM ISCA
Sbjct: 121 NSLSAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 161

[Close]

BLAST of Clc01G02110 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 80/171 (46.78%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 14  SAVVWDCGSSLYDSFELNSLKRQLDSAI---ASRTLSMPHLPTRRC------------LL 73
           S+ VWDCGS+LYDSFELNS KRQLDSAI   ++RT+SM HLP RR              L
Sbjct: 119 SSHVWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLSPEYSPPL 178

Query: 74  PPPPPLPPS------KKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAG------- 133
           PPPP    S      K  +KISRSL +FL+S+F  K + S T  ++P     G       
Sbjct: 179 PPPPTTSSSSSSGGKKHSNKISRSLQRFLKSMFKPKQHQSLTTPSSPVYKAVGHGGGDKD 238

Query: 134 -FYVLYEDEPNSVSAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
            +YV+Y D+  S++ +PE     +SPEI SLVR+T SERF  +  +GISCA
Sbjct: 239 RYYVVY-DKSGSLTTIPESTEKEVSPEINSLVRKTVSERFPASRVVGISCA 288

[Close]

BLAST of Clc01G02110 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 80/171 (46.78%), Postives = 102/171 (59.65%), Query Frame = 0


Query: 14  SAVVWDCGSSLYDSFELNSLKRQLDSAI---ASRTLSMPHLPTRRC------------LL 73
           S+ VWDCGS+LYDSFELNS KRQLDSAI   ++RT+SM HLP RR              L
Sbjct: 110 SSHVWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLSPEYSPPL 169

Query: 74  PPPPPLPPS------KKPSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAG------- 133
           PPPP    S      K  +KISRSL +FL+S+F  K + S T  ++P     G       
Sbjct: 170 PPPPTTSSSSSSGGKKHSNKISRSLQRFLKSMFKPKQHQSLTTPSSPVYKAVGHGGGDKD 229

Query: 134 -FYVLYEDEPNSVSAVPEVGFAGISPEIGSLVRRTASERFTGATSMGISCA 156
            +YV+Y D+  S++ +PE     +SPEI SLVR+T SERF  +  +GISCA
Sbjct: 230 RYYVVY-DKSGSLTTIPESTEKEVSPEINSLVRKTVSERFPASRVVGISCA 279

[Close]

BLAST of Clc01G02110 vs. TAIR 10
Match: AT1G64340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 65/157 (41.40%), Postives = 90/157 (57.32%), Query Frame = 0


Query: 3   SPKFSKSKSS-----QSAVVWDCGSSLYDSFELNSLKRQLDSAIAS--RTLSMPHLPTRR 62
           +PK +  +S+     ++  VWDC S+LYDSFELNS  RQL+SAI+S  R++SMPHL +  
Sbjct: 103 NPKLNTEESTNLDKMKNRKVWDCESTLYDSFELNSFNRQLNSAISSSARSMSMPHLSS-- 162

Query: 63  CLLPPPPPLPPSKK-------PSKISRSLHKFLRSVFGHKPNSSPTFEANPERVDAGFYV 122
              PPPP    S           KISRSL K ++S+F  K  S+  F+     VD   Y 
Sbjct: 163 ---PPPPSETTSSSTKKQQSPTKKISRSLGKLIKSMFKQK-QSNALFKTGHSGVDMDKYY 222

Query: 123 LYEDEPNSVSAVPEVGFAG--ISPEIGSLVRRTASER 144
           +  D+  S++ +PE G +   +  EI SLVR+T SER
Sbjct: 223 VVFDKTGSLTTIPESGESTEMVGSEINSLVRKTTSER 253

The following BLAST results are available for this feature:

BLAST of Clc01G02110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875345.1	5.3e-67	87.90	uncharacterized protein LOC120067824 [Benincasa hispida]	[more]
XP_022929008.1	5.9e-66	86.45	uncharacterized protein LOC111435738 [Cucurbita moschata] >XP_023551387.1 unchar...	[more]
XP_008437381.1	5.5e-64	85.44	PREDICTED: uncharacterized protein LOC103482814 [Cucumis melo] >KAA0042691.1 put...	[more]
XP_022970102.1	7.2e-64	84.52	uncharacterized protein LOC111469095 [Cucurbita maxima]	[more]
XP_011654703.1	2.5e-61	83.23	uncharacterized protein LOC105435436 [Cucumis sativus] >KGN50029.1 hypothetical ...	[more]

BLAST of Clc01G02110 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc01G02110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQS3	2.8e-66	86.45	uncharacterized protein LOC111435738 OS=Cucurbita moschata OX=3662 GN=LOC1114357...	[more]
A0A5D3C469	2.7e-64	85.44	Putative inactive serine/threonine-protein kinase slob1 isoform X1 OS=Cucumis me...	[more]
A0A1S3AU09	2.7e-64	85.44	uncharacterized protein LOC103482814 OS=Cucumis melo OX=3656 GN=LOC103482814 PE=...	[more]
A0A6J1HY70	3.5e-64	84.52	uncharacterized protein LOC111469095 OS=Cucurbita maxima OX=3661 GN=LOC111469095...	[more]
A0A0A0KMF8	1.2e-61	83.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150470 PE=4 SV=1	[more]

BLAST of Clc01G02110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41810.1	1.5e-27	46.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41810.2	1.5e-27	46.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64340.1	1.7e-18	41.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..72
None	No IPR available	PANTHER	PTHR33978:SF4	SERINE/THREONINE-KINASE	coord: 5..155
None	No IPR available	PANTHER	PTHR33978	SERINE/THREONINE-KINASE	coord: 5..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G02110.1	Clc01G02110.1	mRNA