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Clc01G01610 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAACCCCCACCCATACGCGGCAAAGCACCAGAATTGTCATAGAAACAAACTTTGACTCGTTAAAAAATGCAAATCCCACCACCAAAACTTGTCCCTTTGTACACGTCATCGTTCAACCCGTGTGCTCGCACCCCTGGGTTGAACCAACAAAACCAGCGGAATTTTTCCATCACTCATCTCGCCGCCTTCTCCGATTCCTTCCCCATATTTCCTTATAATCTCTCCAATTTTCACCTCCATTTCATAATCAAATCAATCTTCAACTCATCACAATCTCCAAATTTCGATGTGTAGGTCCACGGATTACCGGATTCTCGGCGGTGATCGTCTCAAGATCAAGGCATTCTTCGTTCGATTTTCCCATCTCGAACCCCTAAGTCCTCCGCCGGAGTCGCTCACTCTCTTCTACCTCCCGCGCATTGACGAGACCGACCTCGAGATCGACGGCCTCAAGATCCGGCCGGACTCGCCGGCGTTCGTCACTCTTCATCGAGTCGTATCGTCGTCGAGGATGAAGAAGGATGTGGTGTTTGGGAGTAGGGAGCGAGTTCGAGCGAGCGAAGGCGTGCAGTTTCAGGTGTATTTGAGGGAGGAGAAGGTTGTGCAGGGGATTTTTAGGAAGAGCGACGACGGAGAATGGAGATTGGAGTGTAGATGCACGCTTGAATCTGAGATTGATGGAGCAGCGGCGGGGGCGGCGGATGTTTGCGTGGATGTGGAGGGACAGGAAGCGATGTGTGAGAAGGTGGTTCTAGAAGTGAGAAGGAAGAAGAGGAGAGGATTCTGTGGACTGGAGGAGATTCCGGAGGGACGAGAAGTGGACGGTGAGTGCGAGGGATGTGGTTGTTGTTGCGGAGATGATGGAGATTCATCGGAGGATGACGGCGGCGATGATGACGATGAAGACGGCGGAGGAAAGCAGGTGGAGATGGAGATGGAGGTGGAAGGGGTCCGATGGGCCGTAGATTTGGGGATTTGGGCCGTGTGTTTGGGCGTTGGATACTTGGTATCGAGGGCGGCCCAGTCCAAAACATTGAGACGGAAACGAATTTTCTGAAGCATTGAGAAAAAAATAATTAATTTTGTTTTATCGGGATTTTTTTTTAAAATTTAATTTAATTTATAATTATGAGTTGTTGAGAATGTTAAAAAATGAAATTTTGTCGTAGTTGTACATAACATTTTTTTGCGATACTATAAAAATAATGCTATTGAATTGGGATTCAATTTGCTCAGTAACTAAAAAAACTGATGCTTGTAAACATTGAAGAAGAAGAATGTGGGGCTTTTTGTACGGTTGAAATTTGTTGCTTTTTCAAATATCATTTTGGCCAACTTTGCTTTACTTCCAAAGAAAAAGAGACACTAGGCATCTTCTAGTGCTTTAGTCTAATCTCTCTC CGAACCCCCACCCATACGCGGCAAAGCACCAGAATTGTCATAGAAACAAACTTTGACTCGTTAAAAAATGCAAATCCCACCACCAAAACTTGTCCCTTTGTACACGTCATCGTTCAACCCGTGTGCTCGCACCCCTGGGTTGAACCAACAAAACCAGCGGAATTTTTCCATCACTCATCTCGCCGCCTTCTCCGATTCCTTCCCCATATTTCCTTATAATCTCTCCAATTTTCACCTCCATTTCATAATCAAATCAATCTTCAACTCATCACAATCTCCAAATTTCGATGTGTAGGTCCACGGATTACCGGATTCTCGGCGGTGATCGTCTCAAGATCAAGGCATTCTTCGTTCGATTTTCCCATCTCGAACCCCTAAGTCCTCCGCCGGAGTCGCTCACTCTCTTCTACCTCCCGCGCATTGACGAGACCGACCTCGAGATCGACGGCCTCAAGATCCGGCCGGACTCGCCGGCGTTCGTCACTCTTCATCGAGTCGTATCGTCGTCGAGGATGAAGAAGGATGTGGTGTTTGGGAGTAGGGAGCGAGTTCGAGCGAGCGAAGGCGTGCAGTTTCAGGTGTATTTGAGGGAGGAGAAGGTTGTGCAGGGGATTTTTAGGAAGAGCGACGACGGAGAATGGAGATTGGAGTGTAGATGCACGCTTGAATCTGAGATTGATGGAGCAGCGGCGGGGGCGGCGGATGTTTGCGTGGATGTGGAGGGACAGGAAGCGATGTGTGAGAAGGTGGTTCTAGAAGTGAGAAGGAAGAAGAGGAGAGGATTCTGTGGACTGGAGGAGATTCCGGAGGGACGAGAAGTGGACGGTGAGTGCGAGGGATGTGGTTGTTGTTGCGGAGATGATGGAGATTCATCGGAGGATGACGGCGGCGATGATGACGATGAAGACGGCGGAGGAAAGCAGGTGGAGATGGAGATGGAGGTGGAAGGGGTCCGATGGGCCGTAGATTTGGGGATTTGGGCCGTGTGTTTGGGCGTTGGATACTTGGTATCGAGGGCGGCCCAGTCCAAAACATTGAGACGGAAACGAATTTTCTGAAGCATTGAGAAAAAAATAATTAATTTTGTTTTATCGGGATTTTTTTTTAAAATTTAATTTAATTTATAATTATGAGTTGTTGAGAATGTTAAAAAATGAAATTTTGTCGTAGTTGTACATAACATTTTTTTGCGATACTATAAAAATAATGCTATTGAATTGGGATTCAATTTGCTCAGTAACTAAAAAAACTGATGCTTGTAAACATTGAAGAAGAAGAATGTGGGGCTTTTTGTACGGTTGAAATTTGTTGCTTTTTCAAATATCATTTTGGCCAACTTTGCTTTACTTCCAAAGAAAAAGAGACACTAGGCATCTTCTAGTGCTTTAGTCTAATCTCTCTC ATGTGTAGGTCCACGGATTACCGGATTCTCGGCGGTGATCGTCTCAAGATCAAGGCATTCTTCGTTCGATTTTCCCATCTCGAACCCCTAAGTCCTCCGCCGGAGTCGCTCACTCTCTTCTACCTCCCGCGCATTGACGAGACCGACCTCGAGATCGACGGCCTCAAGATCCGGCCGGACTCGCCGGCGTTCGTCACTCTTCATCGAGTCGTATCGTCGTCGAGGATGAAGAAGGATGTGGTGTTTGGGAGTAGGGAGCGAGTTCGAGCGAGCGAAGGCGTGCAGTTTCAGGTGTATTTGAGGGAGGAGAAGGTTGTGCAGGGGATTTTTAGGAAGAGCGACGACGGAGAATGGAGATTGGAGTGTAGATGCACGCTTGAATCTGAGATTGATGGAGCAGCGGCGGGGGCGGCGGATGTTTGCGTGGATGTGGAGGGACAGGAAGCGATGTGTGAGAAGGTGGTTCTAGAAGTGAGAAGGAAGAAGAGGAGAGGATTCTGTGGACTGGAGGAGATTCCGGAGGGACGAGAAGTGGACGGTGAGTGCGAGGGATGTGGTTGTTGTTGCGGAGATGATGGAGATTCATCGGAGGATGACGGCGGCGATGATGACGATGAAGACGGCGGAGGAAAGCAGGTGGAGATGGAGATGGAGGTGGAAGGGGTCCGATGGGCCGTAGATTTGGGGATTTGGGCCGTGTGTTTGGGCGTTGGATACTTGGTATCGAGGGCGGCCCAGTCCAAAACATTGAGACGGAAACGAATTTTCTGA MCRSTDYRILGGDRLKIKAFFVRFSHLEPLSPPPESLTLFYLPRIDETDLEIDGLKIRPDSPAFVTLHRVVSSSRMKKDVVFGSRERVRASEGVQFQVYLREEKVVQGIFRKSDDGEWRLECRCTLESEIDGAAAGAADVCVDVEGQEAMCEKVVLEVRRKKRRGFCGLEEIPEGREVDGECEGCGCCCGDDGDSSEDDGGDDDDEDGGGKQVEMEMEVEGVRWAVDLGIWAVCLGVGYLVSRAAQSKTLRRKRIF Homology
BLAST of Clc01G01610 vs. NCBI nr
Match: XP_004143843.1 (uncharacterized protein LOC101203014 [Cucumis sativus] >KAE8647832.1 hypothetical protein Csa_000611 [Cucumis sativus]) HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-119 Identity = 228/258 (88.37%), Postives = 234/258 (90.70%), Query Frame = 0
BLAST of Clc01G01610 vs. NCBI nr
Match: XP_008437442.1 (PREDICTED: uncharacterized protein LOC103482856 [Cucumis melo] >KAA0042653.1 uncharacterized protein E6C27_scaffold44G001510 [Cucumis melo var. makuwa] >TYK06054.1 uncharacterized protein E5676_scaffold376G001550 [Cucumis melo var. makuwa]) HSP 1 Score: 434.5 bits (1116), Expect = 6.4e-118 Identity = 225/259 (86.87%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Clc01G01610 vs. NCBI nr
Match: XP_038874855.1 (uncharacterized protein LOC120067355 [Benincasa hispida]) HSP 1 Score: 429.5 bits (1103), Expect = 2.1e-116 Identity = 225/258 (87.21%), Postives = 237/258 (91.86%), Query Frame = 0
BLAST of Clc01G01610 vs. NCBI nr
Match: XP_022928853.1 (uncharacterized protein LOC111435644 [Cucurbita moschata] >KAG6579582.1 hypothetical protein SDJN03_24030, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017041.1 hypothetical protein SDJN02_22153, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106 Identity = 203/257 (78.99%), Postives = 223/257 (86.77%), Query Frame = 0
BLAST of Clc01G01610 vs. NCBI nr
Match: XP_023520532.1 (uncharacterized protein LOC111783941 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.0 bits (1003), Expect = 8.1e-105 Identity = 201/257 (78.21%), Postives = 222/257 (86.38%), Query Frame = 0
BLAST of Clc01G01610 vs. ExPASy TrEMBL
Match: A0A0A0KQM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148570 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.6e-120 Identity = 228/258 (88.37%), Postives = 234/258 (90.70%), Query Frame = 0
BLAST of Clc01G01610 vs. ExPASy TrEMBL
Match: A0A5A7THB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001550 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.1e-118 Identity = 225/259 (86.87%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Clc01G01610 vs. ExPASy TrEMBL
Match: A0A1S3AUM0 (uncharacterized protein LOC103482856 OS=Cucumis melo OX=3656 GN=LOC103482856 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.1e-118 Identity = 225/259 (86.87%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Clc01G01610 vs. ExPASy TrEMBL
Match: A0A6J1EQA2 (uncharacterized protein LOC111435644 OS=Cucurbita moschata OX=3662 GN=LOC111435644 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 7.1e-107 Identity = 203/257 (78.99%), Postives = 223/257 (86.77%), Query Frame = 0
BLAST of Clc01G01610 vs. ExPASy TrEMBL
Match: A0A6J1K4D9 (uncharacterized protein LOC111491587 OS=Cucurbita maxima OX=3661 GN=LOC111491587 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 4.3e-104 Identity = 206/268 (76.87%), Postives = 225/268 (83.96%), Query Frame = 0
BLAST of Clc01G01610 vs. TAIR 10
Match: AT4G24110.1 (unknown protein; Has 76 Blast hits to 76 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 218.0 bits (554), Expect = 8.7e-57 Identity = 132/259 (50.97%), Postives = 170/259 (65.64%), Query Frame = 0
BLAST of Clc01G01610 vs. TAIR 10
Match: AT1G75180.1 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 45.8 bits (107), Expect = 6.0e-05 Identity = 69/282 (24.47%), Postives = 113/282 (40.07%), Query Frame = 0
BLAST of Clc01G01610 vs. TAIR 10
Match: AT1G75180.3 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 45.8 bits (107), Expect = 6.0e-05 Identity = 69/282 (24.47%), Postives = 113/282 (40.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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