Cla97C11G224650 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G224650
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Dynein light chain
Location	Cla97Chr11: 30341939 .. 30342838 (-)
RNA-Seq Expression	Cla97C11G224650
Synteny	Cla97C11G224650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGACATATTTGGCATGATTCTGGGAAGATCCGTTAGTGACCACAGAGAGAAGGATATGGACGTGGGTGAGGCAGGAACACCAGCCAAAGTTTATCCTGAAGGCTCTATATAATAACGAAATCTATACTCTCTTCCAATCCTCCTCCGCCTACAGCCGCCCTCAGCTCCGCCGTGTGTGGTGATATATTTAAACCATGTTAGAAGGGAAAGCAATCATCGGAGAGACGGACATGTTGCAGGCCATGCAACAAGACGCTCTGGACCTTGCGGCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACCGACATTGCCTGTTTCATTAAAAAGGTGAAAATTGGTTAAAATATCATTTTGGTACTTCTGCACTCTAGATGTTCCAGTTCTGACTCTATATTTTTAATAAATCTTTATATTAGTTCGTTGTTAAGTTTATTGTTGGATTTTTTTTTTTTTAAATTAATCTTTGTTAGCATTCTCTTAAAACGAAAATATTTAGGTGTATTTCTCTAGGCCAAACCTACATTGTTTAATCATAATTTATCATGTGTCAAATATATTTTATTTTTTAAAAAATTGTGTGGGTAACCCACAAAATTGTTATAAGTGAATTACAGTTTGTCTGAATAATGAGTAGTAATTAAAAATGAAATTGTTATTAAAGAAGCTGACTATAGTTAAAAATTGGGCAGGAATTTGACAGGATATACGGGGGAGGATGGCAATGCATAGTGGGCACTGATTTTGGATCATTTGTGACACATTGTTTTGGGTGCTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTCTTTAGGGGCTCTGCTGCCTCAGAAGAAAAAGAACCTGAGCCAACTCAATTTTCTGTTATGGACACTCTAAAAGCTTGA

mRNA sequence

ATGACGGACATATTTGGCATGATTCTGGGAAGATCCGTTAGTGACCACAGAGAGAAGGATATGGACGTGGGGAAAGCAATCATCGGAGAGACGGACATGTTGCAGGCCATGCAACAAGACGCTCTGGACCTTGCGGCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACCGACATTGCCTGTTTCATTAAAAAGGAATTTGACAGGATATACGGGGGAGGATGGCAATGCATAGTGGGCACTGATTTTGGATCATTTGTGACACATTGTTTTGGGTGCTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTCTTTAGGGGCTCTGCTGCCTCAGAAGAAAAAGAACCTGAGCCAACTCAATTTTCTGTTATGGACACTCTAAAAGCTTGA

Coding sequence (CDS)

ATGACGGACATATTTGGCATGATTCTGGGAAGATCCGTTAGTGACCACAGAGAGAAGGATATGGACGTGGGGAAAGCAATCATCGGAGAGACGGACATGTTGCAGGCCATGCAACAAGACGCTCTGGACCTTGCGGCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACCGACATTGCCTGTTTCATTAAAAAGGAATTTGACAGGATATACGGGGGAGGATGGCAATGCATAGTGGGCACTGATTTTGGATCATTTGTGACACATTGTTTTGGGTGCTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTCTTTAGGGGCTCTGCTGCCTCAGAAGAAAAAGAACCTGAGCCAACTCAATTTTCTGTTATGGACACTCTAAAAGCTTGA

Protein sequence

MTDIFGMILGRSVSDHREKDMDVGKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEPTQFSVMDTLKA

Homology

[Close]

BLAST of Cla97C11G224650 vs. NCBI nr
Match: XP_038899068.1 (dynein light chain 2, cytoplasmic [Benincasa hispida])

HSP 1 Score: 205.3 bits (521), Expect = 3.2e-49
Identity = 102/110 (92.73%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAIIGETDMLQAMQQDAL+LAAKALDSFDVTEATDIA FIKKEFD+IYGGGWQCIVGTD
Sbjct: 4   GKAIIGETDMLQAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDKIYGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAAS-EEKEPEPTQFSVMDTLKA 133
           FGSFVTHCFGCFIYFCVGSLAILLFRGSAAS EE++P+PTQFSVM+TLKA
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQQPQPTQFSVMETLKA 113

[Close]

BLAST of Cla97C11G224650 vs. NCBI nr
Match: XP_004146843.1 (dynein light chain 2, cytoplasmic [Cucumis sativus] >KAE8651306.1 hypothetical protein Csa_000829 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAI+GETDML+AMQQDAL+LAAKALDSFDVTEATDIA FIKKEFDRI+GGGWQCIVGTD
Sbjct: 4   GKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKE--PEPT-QFSVMD-TLK 132
           FGSFVTHCFGCFIYFCVGSLAILLFRGSAAS++++  PEPT  FS+MD TLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQFPEPTHHFSLMDNTLK 115

[Close]

BLAST of Cla97C11G224650 vs. NCBI nr
Match: XP_008454627.1 (PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo] >KAA0036763.1 dynein light chain LC6, flagellar outer arm [Cucumis melo var. makuwa] >TYJ95832.1 dynein light chain LC6, flagellar outer arm [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAIIGETDML+AMQQDAL+LA+KALDSFDVTEATDIA FIKKEFDR YGGGWQCIVGTD
Sbjct: 4   GKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKE--PEPT--QFSVMDTLK 132
           FGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E++  P+P+   FS++DTLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 115

[Close]

BLAST of Cla97C11G224650 vs. NCBI nr
Match: XP_022941140.1 (dynein light chain 2, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43
Identity = 91/108 (84.26%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAI+GETDMLQAMQQDALDLAAKALD FDVTEATDIA FIKKEFDR +GGGWQCIVGTD
Sbjct: 4   GKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEPTQFSVMDTLK 132
           FGSFVTHCFGCFIYFCVGSLAILLFRGS A ++  P PT F+  +TLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQ-HPHPTHFAASETLK 110

[Close]

BLAST of Cla97C11G224650 vs. NCBI nr
Match: XP_022976611.1 (dynein light chain LC6, flagellar outer arm [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKA+IGETDMLQAMQQ+ALDLAAKALDSFDVTE TDIA FIKKEFD +YGGGWQCIVGTD
Sbjct: 4   GKAVIGETDMLQAMQQNALDLAAKALDSFDVTEPTDIARFIKKEFDGMYGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEPTQFSVMDTLK 132
           FGSFVTHC GCFIYFCVGSLA+LLF+GS+ SE  +P PTQFS+++T+K
Sbjct: 64  FGSFVTHCCGCFIYFCVGSLAVLLFKGSSGSE--KPNPTQFSILETIK 109

[Close]

BLAST of Cla97C11G224650 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-17
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 25  KAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDF 84
           KA+I   DM + MQQDA+D A +AL+ +++ +  DIA FIKKEFD+ Y   W CIVG +F
Sbjct: 5   KAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAFIKKEFDKKYNPTWHCIVGRNF 64

Query: 85  GSFVTHCFGCFIYFCVGSLAILLFR 110
           GS+VTH    FIYF +G +AILLF+
Sbjct: 65  GSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cla97C11G224650 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-17
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 25  KAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDF 84
           KA+I   DM + MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +F
Sbjct: 5   KAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIVGRNF 64

Query: 85  GSFVTHCFGCFIYFCVGSLAILLFR 110
           GS+VTH    FIYF +G +AILLF+
Sbjct: 65  GSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cla97C11G224650 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-17
Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 21  MDVGKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIV 80
           M   KA+I   DM + MQQDA+D A +AL+ F++ +  DIA +IKKEFD+ Y   W CIV
Sbjct: 1   MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 81  GTDFGSFVTHCFGCFIYFCVGSLAILLFR 110
           G +FGS+VTH    FIYF +G +A+LLF+
Sbjct: 61  GRNFGSYVTHETKHFIYFYLGQVAVLLFK 87

[Close]

BLAST of Cla97C11G224650 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.6e-17
Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 25  KAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDF 84
           KA+I   DM   MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +F
Sbjct: 5   KAVIKNADMSDDMQQDAIDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIVGRNF 64

Query: 85  GSFVTHCFGCFIYFCVGSLAILLFR 110
           GS+VTH    FIYF +G +AILLF+
Sbjct: 65  GSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cla97C11G224650 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.9e-17
Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 25  KAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDF 84
           KA+I   DM + MQQDA+D A +A++ +++ +  DIA +IKKEFD+ Y   W CIVG +F
Sbjct: 5   KAVIKNADMSEDMQQDAVDCATQAMEKYNIEK--DIAAYIKKEFDKKYNPTWHCIVGRNF 64

Query: 85  GSFVTHCFGCFIYFCVGSLAILLFR 110
           GS+VTH    FIYF +G +AILLF+
Sbjct: 65  GSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Cla97C11G224650 vs. ExPASy TrEMBL
Match: A0A5A7T1H5 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001190 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAIIGETDML+AMQQDAL+LA+KALDSFDVTEATDIA FIKKEFDR YGGGWQCIVGTD
Sbjct: 4   GKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKE--PEPT--QFSVMDTLK 132
           FGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E++  P+P+   FS++DTLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 115

[Close]

BLAST of Cla97C11G224650 vs. ExPASy TrEMBL
Match: A0A1S3BZU7 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103494993 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAIIGETDML+AMQQDAL+LA+KALDSFDVTEATDIA FIKKEFDR YGGGWQCIVGTD
Sbjct: 4   GKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKE--PEPT--QFSVMDTLK 132
           FGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E++  P+P+   FS++DTLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSLIDTLK 115

[Close]

BLAST of Cla97C11G224650 vs. ExPASy TrEMBL
Match: A0A6J1IHC9 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111476954 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKA+IGETDMLQAMQQ+ALDLAAKALDSFDVTE TDIA FIKKEFD +YGGGWQCIVGTD
Sbjct: 4   GKAVIGETDMLQAMQQNALDLAAKALDSFDVTEPTDIARFIKKEFDGMYGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEPTQFSVMDTLK 132
           FGSFVTHC GCFIYFCVGSLA+LLF+GS+ SE  +P PTQFS+++T+K
Sbjct: 64  FGSFVTHCCGCFIYFCVGSLAVLLFKGSSGSE--KPNPTQFSILETIK 109

[Close]

BLAST of Cla97C11G224650 vs. ExPASy TrEMBL
Match: A0A6J1FSQ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 91/108 (84.26%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAI+GETDMLQAMQQDALDLAAKALD FDVTEATDIA FIKKEFDR +GGGWQCIVGTD
Sbjct: 4   GKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEPTQFSVMDTLK 132
           FGSFVTHCFGCFIYFCVGSLAILLFRGS A ++  P PT F+  +TLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQ-HPHPTHFAASETLK 110

[Close]

BLAST of Cla97C11G224650 vs. ExPASy TrEMBL
Match: A0A6J1J2G7 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.4e-43
Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKAI+GETDMLQAMQQDALDLAAKALD FDVTEATDIA FIKKEFDR +GGGWQCIVGTD
Sbjct: 4   GKAIVGETDMLQAMQQDALDLAAKALDRFDVTEATDIARFIKKEFDRTHGGGWQCIVGTD 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEPTQFSVMDTLK 132
           FGSFVTHCFGCFIYFCVGSLAILLFRGS A ++  P PT  +  +TLK
Sbjct: 64  FGSFVTHCFGCFIYFCVGSLAILLFRGSDAPQQ-HPHPTHLAASETLK 110

[Close]

BLAST of Cla97C11G224650 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 141.0 bits (354), Expect = 7.0e-34
Identity = 70/98 (71.43%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKA++G+TDM Q M++DAL LA+KALD FDVTE T IA FIKKEFDR YG GWQCIVGT 
Sbjct: 4   GKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTH 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEKEPEP 122
           FGSFVTHC GCFI+F VGSL ILLF+GS      EP P
Sbjct: 64  FGSFVTHCSGCFIHFSVGSLTILLFKGSVG----EPAP 97

[Close]

BLAST of Cla97C11G224650 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21
Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKA + ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  YG GWQC+VGT+
Sbjct: 4   GKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTN 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGS 112
           FG F TH  G FIYF +G+L  L+F+G+
Sbjct: 64  FGCFFTHSKGTFIYFHLGTLNFLIFKGA 91

[Close]

BLAST of Cla97C11G224650 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 24  GKAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTD 83
           GKA++ ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  YG GWQC+VG++
Sbjct: 4   GKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSN 63

Query: 84  FGSFVTHCFGCFIYFCVGSLAILLFRGSA 113
           FG F TH  G FIYF + +L  L+F+G++
Sbjct: 64  FGCFFTHSKGTFIYFQLETLKFLIFKGAS 92

[Close]

BLAST of Cla97C11G224650 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-14
Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 32  DMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDFGSFVTHC 91
           DM   MQ  A   A   LDS +   +  +A  +KKEFD+ YG  W CIVG+ FGSFVTH 
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 92  FGCFIYFCVGSLAILLFR 110
            GCFIYF +  L +LLF+
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

[Close]

BLAST of Cla97C11G224650 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.2e-14
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 25  KAIIGETDMLQAMQQDALDLAAKALDSFDVTEATDIACFIKKEFDRIYGGGWQCIVGTDF 84
           +A+I   DM   MQ++A+++A  A + + V +  DIA  IKKEFD+ +G  W CIVG +F
Sbjct: 39  RAVIKSADMKDDMQKEAIEIAISAFEKYSVEK--DIAENIKKEFDKKHGATWHCIVGRNF 98

Query: 85  GSFVTHCFGCFIYFCVGSLAILLFR 110
           GS+VTH    F+YF +   A+LLF+
Sbjct: 99  GSYVTHETNHFVYFYLDQKAVLLFK 121

The following BLAST results are available for this feature:

BLAST of Cla97C11G224650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899068.1	3.2e-49	92.73	dynein light chain 2, cytoplasmic [Benincasa hispida]	[more]
XP_004146843.1	2.4e-44	86.61	dynein light chain 2, cytoplasmic [Cucumis sativus] >KAE8651306.1 hypothetical p...	[more]
XP_008454627.1	2.4e-44	83.93	PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo] >KAA003676...	[more]
XP_022941140.1	3.5e-43	84.26	dynein light chain 2, cytoplasmic-like [Cucurbita moschata]	[more]
XP_022976611.1	3.5e-43	82.41	dynein light chain LC6, flagellar outer arm [Cucurbita maxima]	[more]

BLAST of Cla97C11G224650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O96860	2.0e-17	54.12	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]
Q24117	4.4e-17	52.94	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]
O02414	4.4e-17	51.69	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q22799	7.6e-17	52.94	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q3MHR3	9.9e-17	51.76	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]

BLAST of Cla97C11G224650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1H5	1.2e-44	83.93	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G0...	[more]
A0A1S3BZU7	1.2e-44	83.93	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103494993 PE=3 SV=1	[more]
A0A6J1IHC9	1.7e-43	82.41	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111476954 PE=3 SV=1	[more]
A0A6J1FSQ1	1.7e-43	84.26	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111446528 PE=3 SV=1	[more]
A0A6J1J2G7	8.4e-43	83.33	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111480715 PE=3 SV=1	[more]

BLAST of Cla97C11G224650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27360.1	7.0e-34	71.43	Dynein light chain type 1 family protein	[more]
AT3G16120.1	1.0e-21	54.55	Dynein light chain type 1 family protein	[more]
AT1G52240.2	1.3e-19	50.56	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	2.1e-14	50.00	Dynein light chain type 1 family protein	[more]
AT4G15930.1	6.2e-14	44.71	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 21..110 e-value: 2.2E-43 score: 160.2
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 26..109 e-value: 2.5E-31 score: 107.9
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 21..117
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 14..110 e-value: 8.0E-31 score: 107.9
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 20..110
None	No IPR available	PANTHER	PTHR11886:SF70	DYNEIN LIGHT CHAIN	coord: 21..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G224650.2	Cla97C11G224650.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding