Cla97C11G222360 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G222360
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	serine/arginine-rich splicing factor SR45
Location	Cla97Chr11: 28403114 .. 28409345 (+)
RNA-Seq Expression	Cla97C11G222360
Synteny	Cla97C11G222360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGGTCGGGTTCCTCCTCACGTTCCCGCTCATTCTCCGGCTCTGATTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCCTCTGTCTCCCGCTCCCGTTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTCTCTCGCAGCGGTAGTTCTCGGAGCCGAAGCCCCCCTCCTCAGAGAAAGAGGTTCGTCTTTCATTTGACCTTGCATTTTCGTTTTTGGGGTTTTGCATTTGTTGCTTATTGGTTGTCAGTGTGAGAGGAACTATCAGAATTAGGTTTTTTTTTTTCTTTTTTCTTTATGCCTGGGAGTCTGCTTGATTAAGCATTTCACTTTTGTTGCCGTTGATTGGATCTTCCTGTATTTATTCGAAGCCAAATTTTGGAATCATTACGTTATCAAGGAACAGACGCGCTTCGTATACCAAATGTTAATCATTTTTACGCGGTCATTATACATCGAAATCACATTTCCATTTGTTTTTCAGTCCGACTGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACCAGCTAAACGAAGTTCTCCGCCACCCAGGTTATAACGTCTCCGTCTACATTCTACAGTCAAATCAAACTTCTCATTTCTTTTTCATCTCATTAACGTTATAGTATCTTCATTATTTGGTCATGGCATGCATTTCCGATAAGTCGAACATTTATGCTCTGCCGCATTTTTTGATGCCCGCCTTTTGTTAAACACTTTCGAGCCTCTTCAATGATTGTCTTCCTGCTGTTTGTTTAATAAGTTACGAGTTAGGGATGGCTAGGAAACAATTTATAGTATTTCGTTTATCTCCGTTCAACTGCGATGTTTCGTTTTGGACATGCGGTGAATGGATTAACACCATATGCCGAGTTATAAACTTGGTTTCGGATGTAATTTGTTATTTAATTTTATTAAGTGAGCTCATTATCGTTTATTCAGTTAAAACAGGGTTCAGTTTACATTCATTAACTATTTATGGAAACAGAAGAAAATCTTTGAATTCAATACTTCTTCAGACCTGTGGTGTAACTATTGCATTGATTTCAAATTTTAATTGTGATTTGCCCTTGTTGAACTCGATTGTGATAAACAATGTTCTATTACCTTTAATTATCCTGCAGCTGTAAATTTTATCATTGACTATTAAAAAACTGACATATGAATTTTGTTTGTATTAATATTTCCTTCCGTTGTGCATTTGTATAGCAATGATTTGCATCCACTGCTTACCTTTTGTGATATTCTCTTTGTTTGTCAGCCATACTTACATTATTTGTTTTTCGCATTATGTCTATTGGTTTCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGACGCACTGAGTAGGAATGTCCACGAGGGTCATTTAAGAGAAATCTTCGGTATGGTTTTTCACTCGCTTTCTTTAGCCTTTAAACTATTATTGTGATGGATCAATGCGCTTATGTTTTCATATCATTCTTTTTTAAATGTCACATGTTGAATACATCAGTTAAACCAAAGCATAAGAAAAAATGAACTTTTATTTCAAGCTTCAATCACATCATCTGAATGATATTAATATAACACTTTGTCTTCACGAACTTAGTATTTTCTCTTTATAAAAAAGCTTATTATCTTTGTTTAAACATATGTATTTATGTAGTAGATTCAAATCAACATTATCTGTTTGTTGGTAACAATTATTGACCATGTTATTTTGTCCTTAATGATTGATTAACTTGTCATATTAATTACTCTTCCTCCCATCTGATATGTTAAGTTGCTGCATGCTCATTCCTTCCTGCCTCTCAGCCGTTTCTAAACTTTGGATAGTTTCTTTTCACGAATATATTGCATAGAATTAGTTGTAAACTTGTTAGTCTCATTCAATCGAAGATCAACCTCAAATATGAATTTTCCTCCAAAAACCTCTTTATGGCTCGGTAGGCTTGATGATTATTATATTTAATAGGTAATCTATTACCCTTTTTGATGATCTTTTTAAAAAAAGAATTTTAATAAAAAGAAGTAAAGCTCTTACAAGTTTCCCTTTTTTCCCCTCTCTTGATACCTGTAGGTAATTTTGGTGAAGTGGTCAATGTCGAGCTTGCAATGGATCGCACAGTGAGTTTTTAACATGCATATTGGATTTGAAGAACTTCTTCTTGAACAATATATTGACGCATCTGTTCTATTTCTTACAGGTCAACCTTCCTAAAGGATACGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGTAGGTTTTACTTAAATGTTCAAGTACTTGAAGTGCAACTATTGATATCGTCGCATAACTGGGAAATGATTGTGATGATTGGCTAAATGTAGGCCCAAATTGATGGGAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCAACACCTCCAAGGACTGTAGCAACCGTTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTCCTGATGCTGACAAGGATGACATGAAAAGACAGAGAGATCGTATAACTCTCAATAATTATATATTCTCAAAGTCCAACTGTTTTTGCCTATTATTCTATTTTATTTTTCATGAGTATATTATTTTATTGATTTATGTCTGGTTTGTTACATCAGCCTCTCCTCGTCGAAAACCTCTTTCACCTAGAAGGCGCTCGCCTGTTGGTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCACGCCGTCGTCCGGAGTCTCCCCCACGTCGCCGTGTAGAATCTCCTTTTCGTCGCGATTCTCCTCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCCCCATCGCCTTTGGCAAGACGACATAGATCTCCTCCAAGGTTGACCATCATTCCCTCACTCTTCAACCCTCCCAGCCACACACACACAAAATCTGTCTCCTTTTCTTGAAATGGTGGGAGCATTAACATTGTTTAATGTTGGTTGAATAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCACCACCACCTCCTAGGCGCCGGTACTCTGCATTTTACTGTTTTCCGACATCATTTTCTTTTCTCTTGCGCATTGAATGATACACAGAGATGTTTATTGTTTCTAAACTCTCAAATCTATCATATAATGTCGAGGTTGACTATTTATGCCTTACTGCACAAATTATGCAGAAAGATCATATGTAAATATCGTTTTTTTCAATCTTGAATTTTTTCTTGAGCGTGTGTTTCTTTTATTTTAACATTTTGAGCAATGCTGGGTATTTGAAGAAGAATAAAAATTGCATCAGGTTTTGTTTAGTTCTGGGGTTTTTTTTTTTTTTTTGGATAAGAAACAAACACTTGCTGGCCCCTCCCCAAGAAACTAGTGAACTGTGGTTGACACAGGTAACTGTGGTTTTTGGGTGACTCAAGTAAATTTAAAACAATGCTATTTCATACTTAGAATGAAGTATTAGGCTATTAGCTAATAGAGCGTTTCTCGATGTAACTATTTAAAATTTTACTTGCTTCCATACAAAGATGTTCCTAGAGTTTAATCTTAGGTAATTAGAAGGATGGTGACTGAAGGTATGATTACTTTCTAGTGTTTGAGAGATTAACGCATTTAAACATGACGGTTAGAGCTTTTAATTGCTTGTGTTCGCTGTGAGTGATTGAGCATAGTTTTTACTTGAAAGTTATGTAGTCTAACTCAGTGGTTTCAGTTACGTTTTTACTTAGGTATATGAGAGTTGTATACTTAAATTGTGTTTCTTTCTTAGAACACCACCTCGGCGTGCTCGTAGTCCTCCCAGAAGGTCTCCTGTAGTTCGTAGACGAAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATTTTCACCACGGAGGTAACTTGATGCCTAATGAATTTTTTTGTCATGACCAACTATAACTGCCTTTTAAAGGAAAACTATTAGTATCTATTGATTTGGATACTTAATGACCTTTTTTTTTTGGTCATGATCCAATCCCTTTTTAAGAAAAAATATTTCATATTCATTGATTGTCCACTTTGTGTTTGTGATGCATATATTAAATGACGAAGTAGACACAGAAGTCCCTACCATGGGGCATTGATCAAGAAGGAAAAATAATCACAATGAACCCTTTCTGAACATCCCCAAGTGAGAGCTATGAAACAAATGTGATGATTCTCCCTGCTTTTCTATTTTTCCATCAGAGCCTTGCTAGCACTGAGCTAAAGAATTATACTGGTGTAGCCGTGTAGGAAGTTAGTGAAATTAAGTTTGTGTTTTGTTTTAGAAAACTCTCGAATAATTACTCGATTTCGATTTGGAAGTCTACTGCCTGTTTTTGAGCATTCCACGTTCTAGAGTCTCCACCTTTAGGTCCATCAGAATCCTTTCAATCTAGACAGCAGGGGCCGGCCCTTCTGAGCATTCTCAGTGCGTCCTTTAGTAATTGTGATAACGTCTCAGATGCTCTTGGCTAAAGAAGTTACAGTGGCCATTTGCCAACCAAGTTTCTTCCGAAAGAAGCAAAAGTTGGCGGATGTACTACCTTTTACTTCAATTGTCAAACTGCTAGACCTAGGCCTAAAATGGTTTGATGTCTGGTCTTGTGGTCGGGTTTATATAATGATGATTAGAAACTAAGCTTTAAACGATCCCAATTTCCTACTATTACCTAAAATTTTGTTTAAGAAACAATAAGTAGAAACGTCTCCTAATTCTCAAAAAATGTATGTACATAATTGAATAGTAGTGGATAATATTTTTATTGTAAAGTTAAGCAAAGGATGCTAAGAAAGTGCATTTGTGGTTAGCTGGCTTGTTCAATATCATATTCTTTGTCCATTTTGTGGGGGTTTCTGTTGAGAGAAATAATAAGATTTGCAAGGGTGGGCAAGATCTTACAGCGATGTTTGGTCCCTTTTAGATTCTATATTTCTATTTCTTTTTAGGCTTTAGCGACTAGGTCATTTTTCTGTAGTTTGTTGCTTGGCCTCTCTTTTTTGTGGGCCTTTTTTTCCTTCGGTGTATTCTTTCATTTTAATGGAAGTTTAATTTCTTAATTGGCAAAAAAATAAAAATAAAAATAAAATAAAAAACAACCAATCACATCATCGTCTACTTTACCCTTTCTGCGATCGATTACTTTTCCTATATATTATTCCACAGTGCTACTACGCATACCCTTTTTATTATTATTATTATTATTATTATTATTATTTATTATTTTTATGTGCCTCCTCCTGTAATCCATTTATTTATCTTATAATTTTCTTATGGTGATCTCTATCCAGAGGTCGGCCGGCAGCTGCTGGTAGACGTGGGAGATCATCATCCTACTCTGGGTCACCTAGTCCACGCAAGGTTTGATCTTCCCATTCTTAACCCTTTTTTATTACTTCTTTTTACTTGCATTGCAGTCGCTTCACTTTTCTCTATTTTATATTTACAGGTGGCCAGGAGGGTATCTCGCAGTCCAAGAAGGTAATCCTGTGCATTACAAAAAATATCGATATTTTTTCAGAACGTTTTCGATGTTCTTGGAGACCTAGTTTGATCCATAGTTTAAATTACCAAAAATACTTTGGTACATCCCATGTTGCATCACCTATTTTTGTGCATCTCACTAAATTGCCCTATCATTATTTGTCACTTTGCAAATTCACTTTACTTCTTTTTTGAAATATTTTAATTTCTTTTGTTTTTGTGTGATGAGAGTGAAATGCATATAGATGGGTGCATCCACACTTCAAATATTGATCTTAAATCATTTGAGACTTAGTGCATGGACTTTTGTTGTTTCTCTTAAAACTAAAGACAAGAAAGGATTATCTTTCCCAACCCGTAAACCACATTCGCTGCTAAACTTGGATATTCTTTATACTGAGCTTCAAATACCCGAATGAGTAGGTGCTGCTCAACTTATAGTAAGTTTGGAACGACTTGAAAGAATGGACTTTAATGCTTTTCAAGTGTTTTTCAAGTTGTACAATATTGATCACCGTTAATTCTCTCATAATCTTAGATTATTAATATATAAATTTAATTATTGTAGTGTAATTAATTATTTGGTGTGTGTAGGCCTTTGAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCTCGTAAGCCATAA

mRNA sequence

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGGTCGGGTTCCTCCTCACGTTCCCGCTCATTCTCCGGCTCTGATTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCCTCTGTCTCCCGCTCCCGTTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTCTCTCGCAGCGGTAGTTCTCGGAGCCGAAGCCCCCCTCCTCAGAGAAAGAGTCCGACTGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACCAGCTAAACGAAGTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGACGCACTGAGTAGGAATGTCCACGAGGGTCATTTAAGAGAAATCTTCGGTAATTTTGGTGAAGTGGTCAATGTCGAGCTTGCAATGGATCGCACAGTCAACCTTCCTAAAGGATACGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCAACACCTCCAAGGACTGTAGCAACCGTTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTCCTGATGCTGACAAGGATGACATGAAAAGACAGAGAGATCCCTCTCCTCGTCGAAAACCTCTTTCACCTAGAAGGCGCTCGCCTGTTGGTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCACGCCGTCGTCCGGAGTCTCCCCCACGTCGCCGTGTAGAATCTCCTTTTCGTCGCGATTCTCCTCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCCCCATCGCCTTTGGCAAGACGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCACCACCACCTCCTAGGCGCCGAACACCACCTCGGCGTGCTCGTAGTCCTCCCAGAAGGTCTCCTGTAGTTCGTAGACGAAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATTTTCACCACGGAGAGGTCGGCCGGCAGCTGCTGGTAGACGTGGGAGATCATCATCCTACTCTGGGTCACCTAGTCCACGCAAGGTGGCCAGGAGGGTATCTCGCAGTCCAAGAAGGCCTTTGAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCTCGTAAGCCATAA

Coding sequence (CDS)

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGGTCGGGTTCCTCCTCACGTTCCCGCTCATTCTCCGGCTCTGATTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCCTCTGTCTCCCGCTCCCGTTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTCTCTCGCAGCGGTAGTTCTCGGAGCCGAAGCCCCCCTCCTCAGAGAAAGAGTCCGACTGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACCAGCTAAACGAAGTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGACGCACTGAGTAGGAATGTCCACGAGGGTCATTTAAGAGAAATCTTCGGTAATTTTGGTGAAGTGGTCAATGTCGAGCTTGCAATGGATCGCACAGTCAACCTTCCTAAAGGATACGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCAACACCTCCAAGGACTGTAGCAACCGTTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTCCTGATGCTGACAAGGATGACATGAAAAGACAGAGAGATCCCTCTCCTCGTCGAAAACCTCTTTCACCTAGAAGGCGCTCGCCTGTTGGTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCACGCCGTCGTCCGGAGTCTCCCCCACGTCGCCGTGTAGAATCTCCTTTTCGTCGCGATTCTCCTCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCCCCATCGCCTTTGGCAAGACGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCACCACCACCTCCTAGGCGCCGAACACCACCTCGGCGTGCTCGTAGTCCTCCCAGAAGGTCTCCTGTAGTTCGTAGACGAAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATTTTCACCACGGAGAGGTCGGCCGGCAGCTGCTGGTAGACGTGGGAGATCATCATCCTACTCTGGGTCACCTAGTCCACGCAAGGTGGCCAGGAGGGTATCTCGCAGTCCAAGAAGGCCTTTGAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCTCGTAAGCCATAA

Protein sequence

MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSPVGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP

Homology

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BLAST of Cla97C11G222360 vs. NCBI nr
Match: XP_038899577.1 (serine/arginine-rich splicing factor SR45-like [Benincasa hispida])

HSP 1 Score: 696.8 bits (1797), Expect = 1.1e-196
Identity = 408/418 (97.61%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPPPQRKSPTETARRTRAS PPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           GHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSP 240
           RFTLPQRQKMPTPPRTVATVPKR+GPK +NVGPDA+KDDMKRQR+PSPRRKP SPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKREGPKLDNVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 VGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLARRHRS 300
           V RRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLARRHRS
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLARRHRS 300

Query: 301 PPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSF 360
           PPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSF
Sbjct: 301 PPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSF 360

Query: 361 SPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419
           SPRRGRPAAAGRRGRSSSYSGSPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 SPRRGRPAAAGRRGRSSSYSGSPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 418

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BLAST of Cla97C11G222360 vs. NCBI nr
Match: XP_031740559.1 (serine/arginine-rich splicing factor SR45 [Cucumis sativus] >KAE8649784.1 hypothetical protein Csa_012847 [Cucumis sativus])

HSP 1 Score: 687.6 bits (1773), Expect = 6.8e-194
Identity = 404/419 (96.42%), Postives = 409/419 (97.61%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGS SSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPPPQRKSPTETARR+R S PPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRSRPSPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           GHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSP 240
           RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDA+KDDMKRQR+PSPRRKP SPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 VGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPMRGGRSPSPLARRHR 300
           V RRGGSPRRQPDSPRRRP+SPPRRR+ESPFRRDS PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

Query: 361 FSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419
           FSPRRGRP AAGRRGRSSSYS SPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419

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BLAST of Cla97C11G222360 vs. NCBI nr
Match: XP_008465435.1 (PREDICTED: serine/arginine-rich splicing factor SR45 [Cucumis melo])

HSP 1 Score: 682.2 bits (1759), Expect = 2.9e-192
Identity = 404/419 (96.42%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSR+PPPQRKSPTETARR+RAS PPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           GHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSP 240
           RFTLPQRQKMPTPPRTVATV KRDGPKPENVGPDA+KDDMKRQR+ SPRRK  SPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRRSP 240

Query: 241 VGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPMRGGRSPSPLARRHR 300
           V RRGGSPRRQPDSPRRRPESPPRRRVESPFRRDS PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

Query: 361 FSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419
           FSPRRGRP AAGRRGRSSSYS SPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419

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BLAST of Cla97C11G222360 vs. NCBI nr
Match: XP_022136031.1 (serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia])

HSP 1 Score: 656.4 bits (1692), Expect = 1.7e-184
Identity = 398/423 (94.09%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRSFSGSDSRSS  SRSRSRS SVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           SLSRSGSSRSRSPPPQRKSPTETARRTRAS PPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGN
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGN 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPR 240
           VIR RFTLPQRQKMPTPPRTVA  PKRDGPKPENVG +A+KDDMKRQR+PSPRRKP SPR
Sbjct: 181 VIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRKPPSPR 240

Query: 241 RRSPVGRRGGS-PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLA 300
           RRSPV RRGGS PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASP+R GRSPSPL 
Sbjct: 241 RRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRSPSPLP 300

Query: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARS 360
           RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIRRPARS
Sbjct: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIRRPARS 360

Query: 361 RSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 419
           RSRSFSPRRGRPAAA RRGRSSSYS SPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP
Sbjct: 361 RSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 420

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BLAST of Cla97C11G222360 vs. NCBI nr
Match: XP_022136021.1 (serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia])

HSP 1 Score: 650.2 bits (1676), Expect = 1.2e-182
Identity = 398/428 (92.99%), Postives = 402/428 (93.93%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRSFSGSDSRSS  SRSRSRS SVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           SLSRSGSSRSRSPPPQRKSPTETARRTRAS PPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFGNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRSDAEKAQVYMDGA 180
           NVHEGHLREIF NFGEVVNVELAMDRT     VNLPKGYGYVEFKTR DAEKAQVYMDGA
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGYVEFKTRPDAEKAQVYMDGA 180

Query: 181 QIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRK 240
           QIDGNVIR RFTLPQRQKMPTPPRTVA  PKRDGPKPENVG +A+KDDMKRQR+PSPRRK
Sbjct: 181 QIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRK 240

Query: 241 PLSPRRRSPVGRRGGS-PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRS 300
           P SPRRRSPV RRGGS PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASP+R GRS
Sbjct: 241 PPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRS 300

Query: 301 PSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIR 360
           PSPL RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIR
Sbjct: 301 PSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIR 360

Query: 361 RPARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSS 419
           RPARSRSRSFSPRRGRPAAA RRGRSSSYS SPSPRKVARRVSRSPRRPLRGRSSSRSSS
Sbjct: 361 RPARSRSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSS 420

[Close]

BLAST of Cla97C11G222360 vs. ExPASy Swiss-Prot
Match: Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.9e-109
Identity = 288/429 (67.13%), Postives = 331/429 (77.16%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
            SRS SS SRSPP + KSP   ARR R+  PP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIFGNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKD-DMKRQRDPSPRRKP-LSP 240
           ++A FTLP RQK+ +PP+ V+  PKRD PK +N   DA+KD   +R R+ SP+RK  LSP
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSP 240

Query: 241 RRRSPVGRRGGSPRRQ-PDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSP 300
           RRRSP+ RRG SPRR+ PDSP RRRP SP RR      R D+PPRRRPASP RG    SP
Sbjct: 241 RRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPRRRPASPSRGRSPSSP 300

Query: 301 LARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRRPLRG-RSSSRSS 419
            RSRS S SPR+GR   AGRRGRSSSYS SPSPR++ R++  SRSP+RPLRG RSSS SS
Sbjct: 361 GRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSS 409

[Close]

BLAST of Cla97C11G222360 vs. ExPASy Swiss-Prot
Match: Q28E41 (RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=rnps1 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.2e-21
Identity = 113/258 (43.80%), Postives = 141/258 (54.65%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SSSRSRS S S S S S S S S S S S S SRS SSSSS S S SS
Sbjct: 64  ARKRRSASSGSSSSSRSRSSSSSSSSSGSSSGSSSGSSSSSAS-SRSGSSSSSRSSSSSS 123

Query: 65  RSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLR 124
            S SP P R+   +  RR+R+ S   KR     ++ SP      +HI  L+RNV + H+ 
Sbjct: 124 SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 183

Query: 125 EIFGNFGEVVNVELAMDR-TVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
           EIF  +G++  +++ +DR   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 184 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 243

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSPVGR 244
           L      P P R    +P+R  P    + P      M R+  P  RR+  SPRRRSPV R
Sbjct: 244 L-----TPWPMR---AMPRRFSPPRRMLPP----PPMWRRSPPRMRRRSRSPRRRSPVRR 303

Query: 245 RGGSPRRQPDSPRRRPES 262
           R  SP R+    R    S
Sbjct: 304 RSRSPARRRHRSRSSSNS 307

[Close]

BLAST of Cla97C11G222360 vs. ExPASy Swiss-Prot
Match: Q3KPW1 (RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis OX=8355 GN=rnps1-b PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.6e-20
Identity = 111/258 (43.02%), Postives = 142/258 (55.04%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           ++ RRS  SGS SSSRSR  S S S SSS S S S+S S S + SRS SSSSS S S SS
Sbjct: 39  AKKRRSASSGSSSSSRSR--SSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLR 124
            S SP P R+   +  RR+R+ S   KR     ++ SP      +HI  L+RNV + H+ 
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 EIFGNFGEVVNVELAMDR-TVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
           EIF  +G++  +++ +DR   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSPVGR 244
           L      P P R    +P+R  P    + P      M R+  P  RR+  SPRRRSPV R
Sbjct: 219 L-----TPWPMR---AMPRRFSPPRRMLPP----PPMWRRSPPRMRRRSRSPRRRSPVRR 278

Query: 245 RGGSPRRQPDSPRRRPES 262
           R  SP R+    R    S
Sbjct: 279 RSRSPARRRHRSRSSSNS 281

[Close]

BLAST of Cla97C11G222360 vs. ExPASy Swiss-Prot
Match: Q15287 (RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.7e-20
Identity = 110/258 (42.64%), Postives = 143/258 (55.43%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S S SS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLR 124
            S SP P R+   +  RR+R+ S P KR     ++ SP  +   +HI  L+RNV + H+ 
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 EIFGNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
           EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSPVGR 244
           L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSPV R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPDSPRRRPES 262
           R  SP R+    R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Cla97C11G222360 vs. ExPASy Swiss-Prot
Match: Q4R5N1 (RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=RNPS1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.7e-20
Identity = 110/258 (42.64%), Postives = 143/258 (55.43%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S S SS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLR 124
            S SP P R+   +  RR+R+ S P KR     ++ SP  +   +HI  L+RNV + H+ 
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 EIFGNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFT 184
           EIF  +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I A   
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSPVGR 244
           L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSPV R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPDSPRRRPES 262
           R  SP R+    R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Cla97C11G222360 vs. ExPASy TrEMBL
Match: A0A0A0KZM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.7e-195
Identity = 405/419 (96.66%), Postives = 410/419 (97.85%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGS SSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPPPQRKSPTETARR+RAS PPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           GHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSP 240
           RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDA+KDDMKRQR+PSPRRKP SPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 VGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPMRGGRSPSPLARRHR 300
           V RRGGSPRRQPDSPRRRP+SPPRRR+ESPFRRDS PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

Query: 361 FSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419
           FSPRRGRP AAGRRGRSSSYS SPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419

[Close]

BLAST of Cla97C11G222360 vs. ExPASy TrEMBL
Match: A0A1S3CPA3 (serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC103503047 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.4e-192
Identity = 404/419 (96.42%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSR+PPPQRKSPTETARR+RAS PPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           GHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSP 240
           RFTLPQRQKMPTPPRTVATV KRDGPKPENVGPDA+KDDMKRQR+ SPRRK  SPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRRSP 240

Query: 241 VGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDS-PPRRRPASPMRGGRSPSPLARRHR 300
           V RRGGSPRRQPDSPRRRPESPPRRRVESPFRRDS PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

Query: 361 FSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419
           FSPRRGRP AAGRRGRSSSYS SPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419

[Close]

BLAST of Cla97C11G222360 vs. ExPASy TrEMBL
Match: A0A6J1C2D4 (serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 8.2e-185
Identity = 398/423 (94.09%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRSFSGSDSRSS  SRSRSRS SVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           SLSRSGSSRSRSPPPQRKSPTETARRTRAS PPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGN
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGN 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPR 240
           VIR RFTLPQRQKMPTPPRTVA  PKRDGPKPENVG +A+KDDMKRQR+PSPRRKP SPR
Sbjct: 181 VIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRKPPSPR 240

Query: 241 RRSPVGRRGGS-PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLA 300
           RRSPV RRGGS PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASP+R GRSPSPL 
Sbjct: 241 RRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRSPSPLP 300

Query: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARS 360
           RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIRRPARS
Sbjct: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIRRPARS 360

Query: 361 RSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 419
           RSRSFSPRRGRPAAA RRGRSSSYS SPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP
Sbjct: 361 RSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 420

[Close]

BLAST of Cla97C11G222360 vs. ExPASy TrEMBL
Match: A0A6J1C2C4 (serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.9e-183
Identity = 398/428 (92.99%), Postives = 402/428 (93.93%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRSFSGSDSRSS  SRSRSRS SVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           SLSRSGSSRSRSPPPQRKSPTETARRTRAS PPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFGNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRSDAEKAQVYMDGA 180
           NVHEGHLREIF NFGEVVNVELAMDRT     VNLPKGYGYVEFKTR DAEKAQVYMDGA
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGYVEFKTRPDAEKAQVYMDGA 180

Query: 181 QIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRK 240
           QIDGNVIR RFTLPQRQKMPTPPRTVA  PKRDGPKPENVG +A+KDDMKRQR+PSPRRK
Sbjct: 181 QIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRK 240

Query: 241 PLSPRRRSPVGRRGGS-PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRS 300
           P SPRRRSPV RRGGS PRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASP+R GRS
Sbjct: 241 PPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRS 300

Query: 301 PSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIR 360
           PSPL RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIR
Sbjct: 301 PSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIR 360

Query: 361 RPARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSS 419
           RPARSRSRSFSPRRGRPAAA RRGRSSSYS SPSPRKVARRVSRSPRRPLRGRSSSRSSS
Sbjct: 361 RPARSRSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSS 420

[Close]

BLAST of Cla97C11G222360 vs. ExPASy TrEMBL
Match: A0A6J1FJN7 (serine/arginine-rich splicing factor SR45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445960 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 5.1e-179
Identity = 384/418 (91.87%), Postives = 389/418 (93.06%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPS SGSSSRSRS+SGSDSRSSSRSRSRS SV  S S SRSISSSSS SR
Sbjct: 1   MAKPSRGRRSPPSRSGSSSRSRSYSGSDSRSSSRSRSRSRSV--SVSHSRSISSSSSPSR 60

Query: 61  SGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120
           S SSRSRSPPPQRKS TETARRTRAS PPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SASSRSRSPPPQRKSSTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180
           GHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRRRSP 240
           RFTLPQRQKM +PPRT A   KRDGPKPENVG DA+KDD+KRQR+PSPRRKP SPRRRSP
Sbjct: 181 RFTLPQRQKMASPPRTAAAASKRDGPKPENVGADAEKDDLKRQREPSPRRKPPSPRRRSP 240

Query: 241 VGRRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLARRHRS 300
           V RRGGSPRRQPDSPRRRPESPPRRRV      DSPPRRRPASPMRGGRSPSPL RRHRS
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRV------DSPPRRRPASPMRGGRSPSPLGRRHRS 300

Query: 301 PPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSF 360
           PPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRP RSRSRSF
Sbjct: 301 PPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPGRSRSRSF 360

Query: 361 SPRRGRPAAAGRRGRSSSYSGSPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419
           SPRRGRP AAGRRGRSSSYS SPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 SPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 410

[Close]

BLAST of Cla97C11G222360 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-110
Identity = 288/429 (67.13%), Postives = 331/429 (77.16%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
            SRS SS SRSPP + KSP   ARR R+  PP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIFGNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKD-DMKRQRDPSPRRKP-LSP 240
           ++A FTLP RQK+ +PP+ V+  PKRD PK +N   DA+KD   +R R+ SP+RK  LSP
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSP 240

Query: 241 RRRSPVGRRGGSPRRQ-PDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSP 300
           RRRSP+ RRG SPRR+ PDSP RRRP SP RR      R D+PPRRRPASP RG    SP
Sbjct: 241 RRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPRRRPASPSRGRSPSSP 300

Query: 301 LARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRRPLRG-RSSSRSS 419
            RSRS S SPR+GR   AGRRGRSSSYS SPSPR++ R++  SRSP+RPLRG RSSS SS
Sbjct: 361 GRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSS 409

[Close]

BLAST of Cla97C11G222360 vs. TAIR 10
Match: AT1G16610.2 (arginine/serine-rich 45 )

HSP 1 Score: 391.7 bits (1005), Expect = 7.2e-109
Identity = 284/427 (66.51%), Postives = 325/427 (76.11%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
            SRS SS SRSPP + KSP   ARR R+  PP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIFGNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKDDMKRQRDPSPRRKPLSPRR 240
           ++A FTLP RQK+ +PP+ V+  PKRD PK +N   DA+KD       P   R+ LSPRR
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDG-----GPRRPRERLSPRR 240

Query: 241 RSPVGRRGGSPRRQ-PDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLA 300
           RSP+ RRG SPRR+ PDSP RRRP SP RR      R D+PPRRRPASP RG    SP  
Sbjct: 241 RSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPRRRPASPSRGRSPSSPPP 300

Query: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRPAR 360
           RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP R
Sbjct: 301 RRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGR 360

Query: 361 SRSRSFSPRRGRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRRPLRG-RSSSRSSSS 419
           SRS S SPR+GR   AGRRGRSSSYS SPSPR++ R++  SRSP+RPLRG RSSS SSSS
Sbjct: 361 SRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSS 402

[Close]

BLAST of Cla97C11G222360 vs. TAIR 10
Match: AT1G16610.3 (arginine/serine-rich 45 )

HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-108
Identity = 287/439 (65.38%), Postives = 330/439 (75.17%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSA---SVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS S+   S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  LSRSGSSRSRSPPPQRKSPTETARRTRASSPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
            SRS SS SRSPP + KSP   ARR R+  PP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIFGNFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDADKD-DMKRQRDPSPRRKP-LSP 240
           ++A FTLP RQK+ +PP+ V+  PKRD PK +N   DA+KD   +R R+ SP+RK  LSP
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSP 240

Query: 241 RRRSPVGRRGGSPRRQ-PDSP-RRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSP 300
           RRRSP+ RRG SPRR+ PDSP RRRP SP RR      R D+PPRRRPASP RG    SP
Sbjct: 241 RRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPRRRPASPSRGRSPSSP 300

Query: 301 LARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRR----------GRPAAAGRRGRSSSYSGSPSPRKVARRV--SRSPRRPL 419
            RSRS S SPR+          G    AGRRGRSSSYS SPSPR++ R++  SRSP+RPL
Sbjct: 361 GRSRSSSISPRKYVGTHLNFFLGGRGPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPL 420

The following BLAST results are available for this feature:

BLAST of Cla97C11G222360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899577.1	1.1e-196	97.61	serine/arginine-rich splicing factor SR45-like [Benincasa hispida]	[more]
XP_031740559.1	6.8e-194	96.42	serine/arginine-rich splicing factor SR45 [Cucumis sativus] >KAE8649784.1 hypoth...	[more]
XP_008465435.1	2.9e-192	96.42	PREDICTED: serine/arginine-rich splicing factor SR45 [Cucumis melo]	[more]
XP_022136031.1	1.7e-184	94.09	serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia]	[more]
XP_022136021.1	1.2e-182	92.99	serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia]	[more]

BLAST of Cla97C11G222360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEE9	1.9e-109	67.13	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4...	[more]
Q28E41	4.2e-21	43.80	RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=r...	[more]
Q3KPW1	3.6e-20	43.02	RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis OX=8355 GN=rnp...	[more]
Q15287	4.7e-20	42.64	RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 P...	[more]
Q4R5N1	4.7e-20	42.64	RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=...	[more]

BLAST of Cla97C11G222360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZM9	8.7e-195	96.66	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV...	[more]
A0A1S3CPA3	1.4e-192	96.42	serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC10350304...	[more]
A0A6J1C2D4	8.2e-185	94.09	serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3...	[more]
A0A6J1C2C4	5.9e-183	92.99	serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1FJN7	5.1e-179	91.87	serine/arginine-rich splicing factor SR45-like isoform X2 OS=Cucurbita moschata ...	[more]

BLAST of Cla97C11G222360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16610.1	1.3e-110	67.13	arginine/serine-rich 45	[more]
AT1G16610.2	7.2e-109	66.51	arginine/serine-rich 45	[more]
AT1G16610.3	2.1e-108	65.38	arginine/serine-rich 45	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..181 e-value: 2.8E-18 score: 76.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 111..179 e-value: 4.6E-14 score: 52.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 107..185 score: 15.817916
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 10..191 e-value: 4.6E-23 score: 83.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..232
None	No IPR available	PANTHER	PTHR15481	RIBONUCLEIC ACID BINDING PROTEIN S1	coord: 1..410
None	No IPR available	PANTHER	PTHR15481:SF9	BNAA09G56240D PROTEIN	coord: 1..410
IPR034201	RNPS1, RNA recognition motif	CDD	cd12365	RRM_RNPS1	coord: 109..181 e-value: 8.69384E-38 score: 129.598
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 92..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G222360.1	Cla97C11G222360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding