Cla97C11G222170 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G222170
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr11: 28221147 .. 28221536 (-)
RNA-Seq Expression	Cla97C11G222170
Synteny	Cla97C11G222170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAGAACAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGAAATGGCCATTATGCATACAAGGAAGTGAGTGAAAGTGAGGAGCTTGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAATAAGGGTAAGTTTGGGACTGCACGGGAAGTTCTTCACTTGAATTTGTGGTACTTTACTTCAACAATCAGCCATATATTAAGAAAAGCCAAAGCCTTTTATAATGAGTGTTGTTGTGATGCCTATGAAGATGAGAAGATGAAGAAGATTGAAGTGATTTCTATTGATCCTTATTTCTCAATGCCTGTCTTGCCTTATACTACTATGGCTAATTGTATGTAA

mRNA sequence

ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAGAACAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGAAATGGCCATTATGCATACAAGGAAGTGAGTGAAAGTGAGGAGCTTGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAATAAGGGTAAGTTTGGGACTGCACGGGAAGTTCTTCACTTGAATTTGTGGTACTTTACTTCAACAATCAGCCATATATTAAGAAAAGCCAAAGCCTTTTATAATGAGTGTTGTTGTGATGCCTATGAAGATGAGAAGATGAAGAAGATTGAAGTGATTTCTATTGATCCTTATTTCTCAATGCCTGTCTTGCCTTATACTACTATGGCTAATTGTATGTAA

Coding sequence (CDS)

ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAGAACAGCCTCAAGAAAGAGAATTTAAAGAGAGAAAGAAATGGCCATTATGCATACAAGGAAGTGAGTGAAAGTGAGGAGCTTGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAGAAATAAGGGTAAGTTTGGGACTGCACGGGAAGTTCTTCACTTGAATTTGTGGTACTTTACTTCAACAATCAGCCATATATTAAGAAAAGCCAAAGCCTTTTATAATGAGTGTTGTTGTGATGCCTATGAAGATGAGAAGATGAAGAAGATTGAAGTGATTTCTATTGATCCTTATTTCTCAATGCCTGTCTTGCCTTATACTACTATGGCTAATTGTATGTAA

Protein sequence

MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPVLPYTTMANCM

Homology

[Close]

BLAST of Cla97C11G222170 vs. NCBI nr
Match: KGN55571.1 (hypothetical protein Csa_012627 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 8.9e-52
Identity = 105/130 (80.77%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRR-RRNKG 60
           MSVSTQLL LG LEKKGK  +K+E+LKRE NG+Y+YK+VS++EE G+SKGRRRR RR KG
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60

Query: 61  KFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPV 120
           +FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDA+EDE+MKK EVISIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120

Query: 121 LPYTTMANCM 130
           LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130

[Close]

BLAST of Cla97C11G222170 vs. NCBI nr
Match: KAA0052276.1 (hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 6.0e-48
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKG-RRRRRRNKG 60
           MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKG RRRRRR KG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  KFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPV 120
           +FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYEDE+M +    SIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 130
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of Cla97C11G222170 vs. NCBI nr
Match: TYK01842.1 (hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 7.8e-48
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKG-RRRRRRNKG 60
           MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKG RRRRRR KG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  KFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPV 120
           +FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYEDE+M +    SIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 130
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of Cla97C11G222170 vs. NCBI nr
Match: KAG6608012.1 (hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.0 bits (432), Expect = 6.6e-39
Identity = 88/136 (64.71%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----- 60
           MSVS Q+LGL  L+KK K   ++E L+RER GH++  +    ESE+ GD KGRRR     
Sbjct: 1   MSVSIQVLGLTSLQKKEKKCHRREILERERTGHFSTSQHGHHESEQPGDGKGRRREKKQG 60

Query: 61  RRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDP 120
           RRR   +FG AR+VL  N+WYFTSTIS+ILRKAKAFYNECCCDAYEDE+MK++EV  +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSMPVLPYTTMANCM 130
           YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of Cla97C11G222170 vs. NCBI nr
Match: XP_022940822.1 (uncharacterized protein LOC111446301 [Cucurbita moschata])

HSP 1 Score: 171.0 bits (432), Expect = 6.6e-39
Identity = 88/136 (64.71%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----- 60
           MSVS Q+LGL  L+KK K   ++E L+RER GH++  +    ESE+ GD KGRRR     
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDP 120
           RRR   +FG AR+VL  N+WYFTSTIS+ILRKAKAFYNECCCDAYEDE+MK++EV  +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSMPVLPYTTMANCM 130
           YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of Cla97C11G222170 vs. ExPASy TrEMBL
Match: A0A0A0L609 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.3e-52
Identity = 105/130 (80.77%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKGRRRR-RRNKG 60
           MSVSTQLL LG LEKKGK  +K+E+LKRE NG+Y+YK+VS++EE G+SKGRRRR RR KG
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60

Query: 61  KFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPV 120
           +FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDA+EDE+MKK EVISIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120

Query: 121 LPYTTMANCM 130
           LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130

[Close]

BLAST of Cla97C11G222170 vs. ExPASy TrEMBL
Match: A0A5A7UDK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001040 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKG-RRRRRRNKG 60
           MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKG RRRRRR KG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  KFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPV 120
           +FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYEDE+M +    SIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 130
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of Cla97C11G222170 vs. ExPASy TrEMBL
Match: A0A5D3BSQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00900 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVSESEELGDSKG-RRRRRRNKG 60
           MS+STQLLGLG LEKKG+  +K+E+ KRERNG+Y+YKEVS++ E GDSKG RRRRRR KG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  KFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDPYFSMPV 120
           +FGT R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYEDE+M +    SIDPYFSMPV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 130
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of Cla97C11G222170 vs. ExPASy TrEMBL
Match: A0A6J1FKP2 (uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC111446301 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39
Identity = 88/136 (64.71%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 1   MSVSTQLLGLGGLEKKGKNSLKKENLKRERNGHYAYKEVS--ESEELGDSKGRRR----- 60
           MSVS Q+LGL  L+KK K   ++E L+RER GH++  +    ESE+ GD KGRRR     
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEKMKKIEVISIDP 120
           RRR   +FG AR+VL  N+WYFTSTIS+ILRKAKAFYNECCCDAYEDE+MK++EV  +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSMPVLPYTTMANCM 130
           YFSMPV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of Cla97C11G222170 vs. ExPASy TrEMBL
Match: A0A1Q3D8H6 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32173 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 43  EELGDSKGRRRRRRNKGKFGTAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDEK 102
           EE  ++ G +   R K     A +   L +WY TS+IS+ILRKAKAFYNECCCDA+ED  
Sbjct: 31  EEHEENMGEKYMPRKKKPGHWALQFPRLGIWYMTSSISYILRKAKAFYNECCCDAFEDPV 90

Query: 103 MKKIEVISIDPYFSMPVLPYTTMANCM 130
           +   +V  +D YFS PV+P  T++  M
Sbjct: 91  LMGKQVTLVDSYFSTPVVPPPTISPYM 117

[Close]

BLAST of Cla97C11G222170 vs. TAIR 10
Match: AT4G19430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 37  KEVSESEELGDSKGRRRRRRNKGKFG-TAREVLHLN-LWYFTSTISHILRKAKAFYNECC 96
           +E +  +E G    +  +     K+G   R+V  L+ LWY   +ISHILRKA+AFYNE C
Sbjct: 78  EEETNQQEHGKVSNKDGKSITATKYGDLRRDVARLSLLWYMKCSISHILRKARAFYNEFC 137

Query: 97  CDAYEDEKMKKIEVISIDPYFSMPVL 121
           CD Y +     +    ++PYFS+PV+
Sbjct: 138 CDTYAESNTMAV----VEPYFSIPVI 159

The following BLAST results are available for this feature:

BLAST of Cla97C11G222170 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55571.1	8.9e-52	80.77	hypothetical protein Csa_012627 [Cucumis sativus]	[more]
KAA0052276.1	6.0e-48	76.92	hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]	[more]
TYK01842.1	7.8e-48	76.92	hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]	[more]
KAG6608012.1	6.6e-39	64.71	hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022940822.1	6.6e-39	64.71	uncharacterized protein LOC111446301 [Cucurbita moschata]	[more]

BLAST of Cla97C11G222170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G222170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L609	4.3e-52	80.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1	[more]
A0A5A7UDK1	2.9e-48	76.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BSQ8	3.8e-48	76.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1FKP2	3.2e-39	64.71	uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC1114463...	[more]
A0A1Q3D8H6	9.7e-12	47.13	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]

BLAST of Cla97C11G222170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19430.1	1.2e-09	39.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G222170.1	Cla97C11G222170.1	mRNA